Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16740 |
| fragaria_vesca | FvH4_3g14110 FvH4_3g14110 FvH4_3g14110 FvH4_3g14110 |
| malus_domestica | MD07G1169200.v1.1 MD10G1216300.v1.1 |
| prunus_persica | Prupe.1G563700_v2.0.a1 Prupe.1G563700_v2.0.a1 Prupe.1G563700_v2.0.a1 Prupe.4G128400_v2.0.a1 Prupe.4G128400_v2.0.a1 |
| pyrus_communis | pycom10g18230 |
| rosa_chinensis | RchiOBHm_Chr5g0023421 |
| rosa_multiflora | Rmu_sc0004629.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00055630 Rroxscaffold_1G00055920 |
| rosa_rugosa | Rorug05G0079000 Rorug05G0079000 Rorug05G0079100 Rorug05G0079100 |
| rosa_samantha | Rh5AG166000 Rh5BG165200 Rh5CG180100 Rh5DG166700 |
| rosa_wichuraiana | Rw5G014940 Rw5G015100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 170 |
| AccI | GTMKAC | 1 cut(s) | 297 |
| AciI | CCGC | 2 cut(s) | 118, 175 |
| AclWI | GGATC | 3 cut(s) | 120, 145, 158 |
| AcsI | RAATTY | 1 cut(s) | 199 |
| AcuI | CTGAAG | 1 cut(s) | 22 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 78, 321 |
| AgsI | TTSAA | 3 cut(s) | 22, 286, 366 |
| AjnI | CCWGG | 1 cut(s) | 319 |
| AluBI | AGCT | 2 cut(s) | 235, 259 |
| AluI | AGCT | 2 cut(s) | 235, 259 |
| AlwI | GGATC | 3 cut(s) | 120, 145, 158 |
| AoxI | GGCC | 4 cut(s) | 48, 90, 288, 358 |
| ApoI | RAATTY | 1 cut(s) | 199 |
| AspLEI | GCGC | 1 cut(s) | 141 |
| AspS9I | GGNCC | 2 cut(s) | 48, 289 |
| BamHI | GGATCC | 1 cut(s) | 150 |
| BanI | GGYRCC | 1 cut(s) | 170 |
| BciT130I | CCWGG | 1 cut(s) | 321 |
| BfaI | CTAG | 1 cut(s) | 293 |
| BfmI | CTRYAG | 1 cut(s) | 106 |
| BisI | GCNGC | 1 cut(s) | 118 |
| BlsI | GCNGC | 1 cut(s) | 119 |
| Bme1390I | CCNGG | 1 cut(s) | 321 |
| BmgT120I | GGNCC | 2 cut(s) | 48, 289 |
| BmiI | GGNNCC | 2 cut(s) | 152, 172 |
| BmrFI | CCNGG | 1 cut(s) | 321 |
| BmsI | GCATC | 2 cut(s) | 168, 186 |
| BsaJI | CCNNGG | 4 cut(s) | 30, 181, 319, 320 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 78, 321 |
| BseBI | CCWGG | 1 cut(s) | 321 |
| BseDI | CCNNGG | 4 cut(s) | 30, 181, 319, 320 |
| BseGI | GGATG | 1 cut(s) | 177 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 78, 321 |
| BshFI | GGCC | 4 cut(s) | 50, 92, 290, 360 |
| BshNI | GGYRCC | 1 cut(s) | 170 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 78, 321 |
| BsnI | GGCC | 4 cut(s) | 50, 92, 290, 360 |
| Bsp143I | GATC | 2 cut(s) | 112, 150 |
| Bsp19I | CCATGG | 1 cut(s) | 181 |
| BspACI | CCGC | 2 cut(s) | 118, 175 |
| BspANI | GGCC | 4 cut(s) | 50, 92, 290, 360 |
| BspLI | GGNNCC | 2 cut(s) | 152, 172 |
| BspPI | GGATC | 3 cut(s) | 120, 145, 158 |
| BspT107I | GGYRCC | 1 cut(s) | 170 |
| BssECI | CCNNGG | 4 cut(s) | 30, 181, 319, 320 |
| BssMI | GATC | 2 cut(s) | 112, 150 |
| BssT1I | CCWWGG | 2 cut(s) | 30, 181 |
| Bst2UI | CCWGG | 1 cut(s) | 321 |
| Bst4CI | ACNGT | 1 cut(s) | 281 |
| BstC8I | GCNNGC | 1 cut(s) | 169 |
| BstDSI | CCRYGG | 1 cut(s) | 181 |
| BstF5I | GGATG | 1 cut(s) | 177 |
| BstHHI | GCGC | 1 cut(s) | 141 |
| BstKTI | GATC | 2 cut(s) | 115, 153 |
| BstMBI | GATC | 2 cut(s) | 112, 150 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 136, 265 |
| BstNI | CCWGG | 1 cut(s) | 321 |
| BstSCI | CCNGG | 1 cut(s) | 319 |
| BstSFI | CTRYAG | 1 cut(s) | 106 |
| BstX2I | RGATCY | 1 cut(s) | 150 |
| BstYI | RGATCY | 1 cut(s) | 150 |
| BsuRI | GGCC | 4 cut(s) | 50, 92, 290, 360 |
| BtgI | CCRYGG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 177 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 1 cut(s) | 309 |
| Cac8I | GCNNGC | 1 cut(s) | 169 |
| CfoI | GCGC | 1 cut(s) | 141 |
| Cfr13I | GGNCC | 2 cut(s) | 48, 289 |
| CviAII | CATG | 5 cut(s) | 182, 205, 209, 265, 341 |
| CviJI | RGCY | 8 cut(s) | 29, 36, 50, 92, 235, 259, 290, 360 |
| CviKI_1 | RGCY | 8 cut(s) | 29, 36, 50, 92, 235, 259, 290, 360 |
| DpnI | GATC | 2 cut(s) | 114, 152 |
| DpnII | GATC | 2 cut(s) | 112, 150 |
| Eco130I | CCWWGG | 2 cut(s) | 30, 181 |
| Eco147I | AGGCCT | 2 cut(s) | 92, 360 |
| Eco57I | CTGAAG | 1 cut(s) | 22 |
| EcoO109I | RGGNCCY | 1 cut(s) | 289 |
| EcoRII | CCWGG | 1 cut(s) | 319 |
| EcoT14I | CCWWGG | 2 cut(s) | 30, 181 |
| EcoT22I | ATGCAT | 1 cut(s) | 210 |
| ErhI | CCWWGG | 2 cut(s) | 30, 181 |
| FaeI | CATG | 5 cut(s) | 185, 208, 212, 268, 344 |
| FaiI | YATR | 9 cut(s) | 62, 137, 183, 195, 206, 210, 266, 277, 342 |
| FatI | CATG | 5 cut(s) | 181, 204, 208, 264, 340 |
| FauI | CCCGC | 1 cut(s) | 182 |
| FblI | GTMKAC | 1 cut(s) | 297 |
| Fnu4HI | GCNGC | 1 cut(s) | 118 |
| FokI | GGATG | 1 cut(s) | 164 |
| Fsp4HI | GCNGC | 1 cut(s) | 118 |
| FspBI | CTAG | 1 cut(s) | 293 |
| GlaI | GCGC | 1 cut(s) | 140 |
| GluI | GCNGC | 1 cut(s) | 118 |
| HaeIII | GGCC | 4 cut(s) | 50, 92, 290, 360 |
| HhaI | GCGC | 1 cut(s) | 141 |
| Hin1II | CATG | 5 cut(s) | 185, 208, 212, 268, 344 |
| Hin6I | GCGC | 1 cut(s) | 139 |
| HinP1I | GCGC | 1 cut(s) | 139 |
| Hpy166II | GTNNAC | 1 cut(s) | 298 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 298 |
| HpyAV | CCTTC | 5 cut(s) | 39, 82, 214, 325, 350 |
| HpyCH4III | ACNGT | 1 cut(s) | 281 |
| HpyCH4IV | ACGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 4 cut(s) | 60, 97, 208, 268 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 136, 265 |
| HpySE526I | ACGT | 1 cut(s) | 333 |
| Hsp92II | CATG | 5 cut(s) | 185, 208, 212, 268, 344 |
| HspAI | GCGC | 1 cut(s) | 139 |
| Kzo9I | GATC | 2 cut(s) | 112, 150 |
| LmnI | GCTCC | 2 cut(s) | 146, 349 |
| LpnPI | CCDG | 8 cut(s) | 25, 85, 94, 153, 158, 226, 306, 333 |
| LweI | GCATC | 2 cut(s) | 168, 186 |
| MaeI | CTAG | 1 cut(s) | 293 |
| MaeII | ACGT | 1 cut(s) | 333 |
| MalI | GATC | 2 cut(s) | 114, 152 |
| MboI | GATC | 2 cut(s) | 112, 150 |
| MflI | RGATCY | 1 cut(s) | 150 |
| MluCI | AATT | 3 cut(s) | 55, 190, 199 |
| MmeI | TCCRAC | 1 cut(s) | 178 |
| MnlI | CCTC | 1 cut(s) | 72 |
| Mph1103I | ATGCAT | 1 cut(s) | 210 |
| MseI | TTAA | 1 cut(s) | 189 |
| MspA1I | CMGCKG | 1 cut(s) | 235 |
| MspR9I | CCNGG | 1 cut(s) | 321 |
| MvaI | CCWGG | 1 cut(s) | 321 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 136, 265 |
| NcoI | CCATGG | 1 cut(s) | 181 |
| NdeII | GATC | 2 cut(s) | 112, 150 |
| NlaIII | CATG | 5 cut(s) | 185, 208, 212, 268, 344 |
| NlaIV | GGNNCC | 2 cut(s) | 152, 172 |
| NsiI | ATGCAT | 1 cut(s) | 210 |
| PasI | CCCWGGG | 1 cut(s) | 320 |
| PceI | AGGCCT | 2 cut(s) | 92, 360 |
| PkrI | GCNGC | 1 cut(s) | 119 |
| Psp6I | CCWGG | 1 cut(s) | 319 |
| PspGI | CCWGG | 1 cut(s) | 319 |
| PspN4I | GGNNCC | 2 cut(s) | 152, 172 |
| PspPI | GGNCC | 2 cut(s) | 48, 289 |
| PsuI | RGATCY | 1 cut(s) | 150 |
| PvuII | CAGCTG | 1 cut(s) | 235 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| SatI | GCNGC | 1 cut(s) | 118 |
| Sau3AI | GATC | 2 cut(s) | 112, 150 |
| Sau96I | GGNCC | 2 cut(s) | 48, 289 |
| ScrFI | CCNGG | 1 cut(s) | 321 |
| SetI | ASST | 3 cut(s) | 237, 261, 336 |
| SfaNI | GCATC | 2 cut(s) | 168, 186 |
| SfcI | CTRYAG | 1 cut(s) | 106 |
| Sse9I | AATT | 3 cut(s) | 55, 190, 199 |
| SseBI | AGGCCT | 2 cut(s) | 92, 360 |
| SsiI | CCGC | 2 cut(s) | 118, 175 |
| SspMI | CTAG | 1 cut(s) | 293 |
| StuI | AGGCCT | 2 cut(s) | 92, 360 |
| StyD4I | CCNGG | 1 cut(s) | 319 |
| StyI | CCWWGG | 2 cut(s) | 30, 181 |
| TaaI | ACNGT | 1 cut(s) | 281 |
| TaiI | ACGT | 1 cut(s) | 336 |
| TasI | AATT | 3 cut(s) | 55, 190, 199 |
| TauI | GCSGC | 1 cut(s) | 120 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TscAI | CASTG | 1 cut(s) | 316 |
| TspDTI | ATGAA | 4 cut(s) | 17, 193, 233, 329 |
| TspRI | CASTG | 1 cut(s) | 316 |
| XapI | RAATTY | 1 cut(s) | 199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 79 |
| XmiI | GTMKAC | 1 cut(s) | 297 |
| XspI | CTAG | 1 cut(s) | 293 |
| Zsp2I | ATGCAT | 1 cut(s) | 210 |