Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014301

Physical Location & Seq

Genomic Coordinates Forward (+)

1272394 .. 1278214

Gene Structure 5821 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G014400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGGCGTCGTTTGGGTCTTTAAAATCTGCAATCTTCGACAGAGAAGCGAGAAAACAGCAGTACCAGGCTCACATTCTTGGCCTCAACGCTTACGACCGTCACAAAAAGTTTGTTAAAGATTACGTTAGCTTTTATGGTAGAGAAGAATCTTCACATGTCAAGCTGCCAGTCAAAACTGATCAAGACACCCTAAGAGAAGGGTATCGGTTCATAAGATCCGAGGAAGATGATATGGACCGCTCTTGGGAACAAAGGCTGGTTAAGCGATACTATGACAAGCTGTTTAAAGAATACTGCATAGCGGACATGTCACATTACAAGAGTGGTAAGATTGGTCTGAGGTGGAGGACAGAAAAGGAAGTTGTATCTGGTAAAGGGCAGTTCGTATGTGGTAACAAACATTGTGATGTAAAAGATGGTTTAGCAAGCTATGAGGTGAACTTTTCTTATTTTGAAGCTGGAGAAAACAAACAAGCCCTTGTCAAATTGGTAACTTGTGAGAGATGTTCAGAAAAGCTTCATTACAAAAGACGGAAAGAGAAAGAGCAACTGGAAAAAGAAAAGAAGGAAGTGAACAGAAGAAAGAGGAGTCGGTCAGGGGATGATGATGATGATGATGATGATACTGACAATGAGGGAAACAAAGAAAGGAGTAAAGCGAAAAAGGCTTCAATCTCTACTAGTGAACATAGAGCTGATGATGATGATGACGACTTTGATGAGTTTCTTGAGGGAATGTTTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Fra10Ac1

Protein Analysis

249

Amino Acids

29.26

Weight (kDa)

6.42

Isoelectric Point (pI)

52.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15030 AT4G15030 AT4G15030
fragaria_vesca	FvH4_7g01110
malus_domestica	MD02G1310300.v1.1 MD07G1011200.v1.1
prunus_persica	Prupe.2G014400_v2.0.a1
pyrus_communis	pycom07g00930
rosa_chinensis	RchiOBHm_Chr1g0316111
rosa_laevigata	RLG00000030694
rosa_multiflora	Rmu_sc0002531.1_g000028
rosa_roxburghii	Rroxscaffold_4G00331130
rosa_rugosa	Rorug01G0009100
rosa_samantha	Rh1AG019100 Rh1BG014100 Rh1CG016700
rosa_wichuraiana	Rw1G001240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	240
AciI	CCGC	2 cut(s)	238, 302
AclWI	GGATC	1 cut(s)	210
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	1 cut(s)	62
AfiI	CCNNNNNNNGG	1 cut(s)	244
AflIII	ACRYGT	2 cut(s)	154, 306
AgsI	TTSAA	2 cut(s)	455, 672
AhlI	ACTAGT	1 cut(s)	680
AjnI	CCWGG	1 cut(s)	63
AluBI	AGCT	7 cut(s)	129, 163, 280, 429, 458, 517, 695
AluI	AGCT	7 cut(s)	129, 163, 280, 429, 458, 517, 695
AlwI	GGATC	1 cut(s)	210
AoxI	GGCC	1 cut(s)	79
ApeKI	GCWGC	1 cut(s)	163
Asp700I	GAANNNNTTC	1 cut(s)	516
AspS9I	GGNCC	1 cut(s)	235
AsuHPI	GGTGA	1 cut(s)	448
AvaII	GGWCC	1 cut(s)	235
BaeI	ACNNNNGTAYC	2 cut(s)	44, 77
BbvI	GCAGC	1 cut(s)	150
BccI	CCATC	1 cut(s)	410
BciT130I	CCWGG	1 cut(s)	65
BclI	TGATCA	1 cut(s)	178
BcuI	ACTAGT	1 cut(s)	680
BfaI	CTAG	1 cut(s)	681
BisI	GCNGC	1 cut(s)	164
BlsI	GCNGC	1 cut(s)	165
Bme1390I	CCNGG	1 cut(s)	65
Bme18I	GGWCC	1 cut(s)	235
BmgT120I	GGNCC	1 cut(s)	235
BmrFI	CCNGG	1 cut(s)	65
BpmI	CTGGAG	1 cut(s)	480
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	1 cut(s)	219
Bsc4I	CCNNNNNNNGG	1 cut(s)	244
Bse1I	ACTGG	2 cut(s)	167, 555
BseBI	CCWGG	1 cut(s)	65
BseDI	CCNNGG	1 cut(s)	219
BseGI	GGATG	1 cut(s)	607
BseLI	CCNNNNNNNGG	1 cut(s)	244
BseMII	CTCAG	1 cut(s)	329
BseNI	ACTGG	2 cut(s)	167, 555
BseRI	GAGGAG	1 cut(s)	601
BseXI	GCAGC	1 cut(s)	150
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	1 cut(s)	81
BsiEI	CGRYCG	1 cut(s)	97
BslI	CCNNNNNNNGG	1 cut(s)	244
BsnI	GGCC	1 cut(s)	81
Bsp143I	GATC	2 cut(s)	178, 215
BspACI	CCGC	2 cut(s)	238, 302
BspANI	GGCC	1 cut(s)	81
BspCNI	CTCAG	1 cut(s)	330
BspPI	GGATC	1 cut(s)	210
BsrBI	CCGCTC	1 cut(s)	240
BsrI	ACTGG	2 cut(s)	167, 555
BssECI	CCNNGG	1 cut(s)	219
BssMI	GATC	2 cut(s)	178, 215
BssNI	GRCGYC	1 cut(s)	5
Bst2UI	CCWGG	1 cut(s)	65
Bst4CI	ACNGT	1 cut(s)	98
BstACI	GRCGYC	1 cut(s)	5
BstC8I	GCNNGC	1 cut(s)	427
BstDEI	CTNAG	2 cut(s)	191, 338
BstF5I	GGATG	1 cut(s)	607
BstKTI	GATC	2 cut(s)	181, 218
BstMBI	GATC	2 cut(s)	178, 215
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	2 cut(s)	262, 665
BstNI	CCWGG	1 cut(s)	65
BstNSI	RCATGY	2 cut(s)	158, 310
BstSCI	CCNGG	1 cut(s)	63
BstV1I	GCAGC	1 cut(s)	150
BstX2I	RGATCY	1 cut(s)	215
BstYI	RGATCY	1 cut(s)	215
BsuRI	GGCC	1 cut(s)	81
BtsCI	GGATG	1 cut(s)	607
Cac8I	GCNNGC	1 cut(s)	427
Cfr13I	GGNCC	1 cut(s)	235
Csp6I	GTAC	1 cut(s)	61
CviAII	CATG	2 cut(s)	155, 307
CviQI	GTAC	1 cut(s)	61
DdeI	CTNAG	2 cut(s)	191, 338
DpnI	GATC	2 cut(s)	180, 217
DpnII	GATC	2 cut(s)	178, 215
DraI	TTTAAA	2 cut(s)	21, 286
Eco47I	GGWCC	1 cut(s)	235
EcoRII	CCWGG	1 cut(s)	63
FaeI	CATG	2 cut(s)	158, 310
FatI	CATG	2 cut(s)	154, 306
FbaI	TGATCA	1 cut(s)	178
Fnu4HI	GCNGC	1 cut(s)	164
FokI	GGATG	1 cut(s)	614
Fsp4HI	GCNGC	1 cut(s)	164
FspBI	CTAG	1 cut(s)	681
GluI	GCNGC	1 cut(s)	164
GsuI	CTGGAG	1 cut(s)	480
HaeIII	GGCC	1 cut(s)	81
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	158, 310
HindIII	AAGCTT	1 cut(s)	515
HinfI	GANTC	2 cut(s)	146, 589
HphI	GGTGA	1 cut(s)	448
Hpy166II	GTNNAC	3 cut(s)	439, 574, 686
Hpy188I	TCNGA	3 cut(s)	220, 339, 511
Hpy188III	TCNNGA	2 cut(s)	182, 728
Hpy8I	GTNNAC	3 cut(s)	439, 574, 686
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	2 cut(s)	191, 559
HpyCH4III	ACNGT	1 cut(s)	98
HpyCH4IV	ACGT	1 cut(s)	123
HpyCH4V	TGCA	2 cut(s)	29, 297
HpyF10VI	GCNNNNNNNGC	2 cut(s)	262, 665
HpyF3I	CTNAG	2 cut(s)	191, 338
HpySE526I	ACGT	1 cut(s)	123
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	158, 310
Ksp22I	TGATCA	1 cut(s)	178
Kzo9I	GATC	2 cut(s)	178, 215
LpnPI	CCDG	8 cut(s)	50, 77, 180, 242, 354, 444, 536, 582
Lsp1109I	GCAGC	1 cut(s)	150
MaeI	CTAG	1 cut(s)	681
MaeII	ACGT	1 cut(s)	123
MaeIII	GTNAC	4 cut(s)	98, 309, 392, 490
MalI	GATC	2 cut(s)	180, 217
MbiI	CCGCTC	1 cut(s)	240
MboI	GATC	2 cut(s)	178, 215
MboII	GAAGA	5 cut(s)	25, 141, 155, 236, 591
MflI	RGATCY	1 cut(s)	215
MluCI	AATT	1 cut(s)	485
MlyI	GAGTC	1 cut(s)	598
MnlI	CCTC	8 cut(s)	92, 214, 333, 339, 427, 579, 628, 724
MroXI	GAANNNNTTC	1 cut(s)	516
MseI	TTAA	4 cut(s)	20, 114, 261, 285
MslI	CAYNNNNRTG	1 cut(s)	405
MspR9I	CCNGG	1 cut(s)	65
MvaI	CCWGG	1 cut(s)	65
MwoI	GCNNNNNNNGC	2 cut(s)	262, 665
NdeII	GATC	2 cut(s)	178, 215
NlaIII	CATG	2 cut(s)	158, 310
NmuCI	GTSAC	2 cut(s)	98, 309
NspI	RCATGY	2 cut(s)	158, 310
PciI	ACATGT	2 cut(s)	154, 306
PdmI	GAANNNNTTC	1 cut(s)	516
PfeI	GAWTC	1 cut(s)	146
PkrI	GCNGC	1 cut(s)	165
PleI	GAGTC	1 cut(s)	597
PpsI	GAGTC	1 cut(s)	597
PscI	ACATGT	2 cut(s)	154, 306
Psp6I	CCWGG	1 cut(s)	63
PspGI	CCWGG	1 cut(s)	63
PspPI	GGNCC	1 cut(s)	235
PsuI	RGATCY	1 cut(s)	215
RsaI	GTAC	1 cut(s)	62
RsaNI	GTAC	1 cut(s)	61
RseI	CAYNNNNRTG	1 cut(s)	405
SaqAI	TTAA	4 cut(s)	20, 114, 261, 285
SatI	GCNGC	1 cut(s)	164
Sau3AI	GATC	2 cut(s)	178, 215
Sau96I	GGNCC	1 cut(s)	235
SchI	GAGTC	1 cut(s)	598
ScrFI	CCNGG	1 cut(s)	65
SinI	GGWCC	1 cut(s)	235
SmiMI	CAYNNNNRTG	1 cut(s)	405
SmlI	CTYRAG	1 cut(s)	728
SmoI	CTYRAG	1 cut(s)	728
SpeI	ACTAGT	1 cut(s)	680
Sse9I	AATT	1 cut(s)	485
SsiI	CCGC	2 cut(s)	238, 302
SspMI	CTAG	1 cut(s)	681
StyD4I	CCNGG	1 cut(s)	63
TaaI	ACNGT	1 cut(s)	98
TaiI	ACGT	1 cut(s)	126
TaqI	TCGA	1 cut(s)	36
TaqII	GACCGA	1 cut(s)	582
TasI	AATT	1 cut(s)	485
TfiI	GAWTC	1 cut(s)	146
Tru1I	TTAA	4 cut(s)	20, 114, 261, 285
Tru9I	TTAA	4 cut(s)	20, 114, 261, 285
TseFI	GTSAC	2 cut(s)	98, 309
TseI	GCWGC	1 cut(s)	163
Tsp45I	GTSAC	2 cut(s)	98, 309
TspDTI	ATGAA	2 cut(s)	199, 509
TspGWI	ACGGA	1 cut(s)	547
VpaK11BI	GGWCC	1 cut(s)	235
XceI	RCATGY	2 cut(s)	158, 310
XmnI	GAANNNNTTC	1 cut(s)	516
XspI	CTAG	1 cut(s)	681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.