Prupe.2G017800_v2.0.a1

Protein of unknown function (DUF642)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
1661829 .. 1664214
2386 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G017800.1

Sequence Viewer

Length: 1104 bp
ATGGCAGCTGTGCTCTTTCTTCTGCTTGCATTCTCATTTATGTTCACTAATCCTGCTTATGCAGCTGTACAAGTGCCTTTGGATGGGCTCTTGAACAATGGCAACTTCGAAGAGCCACCAAAACCAACAAACCTCAAGAAAACAGTACTCATAGGCAAATATGCACTGCCCAAATGGGAAATCAATGGCTTCGTGGAGTACATCTCCGGCGGCCCGCAACCGGGTGGAATGTACTTTTCTGTGGCTCATGGTGTTCATGCTGTGAGGCTTGGCAATGAGGCCTCCATCTCTCAAACCATAAAGGTGAAACCAGGGTCTCTGTATGCTCTAACATTTGGGGCATCAAGGACTTGTGCACAAGAAGAGGTTTTGAGGGTCTCAGTGCCTCCTCAGGCAGGGGACCTTCCTTTGCAGACTCTCTATAGCAGCAATGGAGGTGATACTTATGCTTGGGGTTTCAGAGCCACTTCCAATGTAGTAAAAGTGACTTTTCACAATCCAGGGGTTCAAGAGGACCCTGCTTGTGGTCCTCTCTTAGATGCAATTGCTATCAAGGAACTCTTCCCTGCACTACCCACTAGAGATAATTTGGTCAGAAATCCTGGGTTTGAGGAGGCTCCCCATAGGTTATTCAACTCTTCCCATGGTGTACTCCTCCCTCCAAAACAACTAGATGTGACATCCCCCCTTCCTGGCTGGATCATCGAGTCCCTCAAAGCCGTAAAGTTCATCGATTCCCAACACTTCAATGTCCCATTTGGAAAAGGCGCCGTTGAGCTTGTTGCAGGGAGAGAAAGTGCCATAGCGCAGGTTCTTAGAACTGTGCCCAACAAGATCTACGATCTCTCATTTGTCGTTGGCGATGCAAGGAACGGCTGCCACGGTTCGATGATGGTTGAAGCATTTGCCGGCAAGGACACCTTAAAAGTTCCCTTCACCTCCCAAGGAAAAGGCGGGTTCAAGGCTGCTAGTCTCAAGTTCAAAGCAGCTTCACCCAGGACCAGAATTACATTCTACAGCTCTTTCTACCACACCAGGGTTGATGACTACGGAGCTCTTTGTGGCCCTATCCTAGACCAAGTTAGGGTTTACCCTGTTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

368

Amino Acids

39.66

Weight (kDa)

8.88

Isoelectric Point (pI)

38.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 799
AccB1I GGYRCC 1 cut(s) 767
AciI CCGC 3 cut(s) 210, 215, 954
AclWI GGATC 1 cut(s) 707
AcyI GRCGYC 1 cut(s) 768
AfaI GTAC 5 cut(s) 69, 147, 200, 233, 651
AfiI CCNNNNNNNGG 8 cut(s) 83, 220, 221, 395, 524, 692, 1036, 1084
AgsI TTSAA 7 cut(s) 94, 509, 634, 748, 899, 961, 982
AjnI CCWGG 6 cut(s) 310, 499, 601, 691, 995, 1034
AluBI AGCT 6 cut(s) 8, 65, 778, 989, 1020, 1055
AluI AGCT 6 cut(s) 8, 65, 778, 989, 1020, 1055
Alw21I GWGCWC 3 cut(s) 15, 358, 1057
Alw26I GTCTC 3 cut(s) 321, 382, 977
Alw44I GTGCAC 1 cut(s) 354
AlwI GGATC 1 cut(s) 707
AoxI GGCC 3 cut(s) 211, 279, 1063
ApaLI GTGCAC 1 cut(s) 354
ApeKI GCWGC 6 cut(s) 5, 62, 426, 876, 965, 986
AspLEI GCGC 2 cut(s) 770, 808
AspS9I GGNCC 6 cut(s) 212, 400, 514, 527, 999, 1064
AsuC2I CCSGG 1 cut(s) 222
AsuHPI GGTGA 4 cut(s) 316, 449, 928, 984
AsuII TTCGAA 1 cut(s) 108
AvaII GGWCC 4 cut(s) 400, 514, 527, 999
AxyI CCTNAGG 1 cut(s) 390
BaeGI GKGCMC 2 cut(s) 358, 828
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 2 cut(s) 90, 1057
Bbv12I GWGCWC 3 cut(s) 15, 358, 1057
BbvI GCAGC 6 cut(s) 17, 74, 438, 863, 952, 998
BccI CCATC 3 cut(s) 77, 293, 886
BceAI ACGGC 3 cut(s) 704, 755, 889
BciT130I CCWGG 6 cut(s) 312, 501, 603, 693, 997, 1036
BcnI CCSGG 1 cut(s) 222
BcoDI GTCTC 3 cut(s) 321, 382, 977
BfaI CTAG 4 cut(s) 579, 671, 969, 1073
BfmI CTRYAG 2 cut(s) 421, 1015
BfoI RGCGCY 1 cut(s) 771
BfuAI ACCTGC 1 cut(s) 799
BglII AGATCT 1 cut(s) 834
BisI GCNGC 7 cut(s) 6, 63, 211, 427, 877, 966, 987
BlsI GCNGC 7 cut(s) 7, 64, 212, 428, 878, 967, 988
BmcAI AGTACT 1 cut(s) 147
Bme1390I CCNGG 7 cut(s) 222, 312, 501, 603, 693, 997, 1036
Bme18I GGWCC 4 cut(s) 400, 514, 527, 999
BmgT120I GGNCC 6 cut(s) 212, 400, 514, 527, 999, 1064
BmiI GGNNCC 4 cut(s) 401, 516, 618, 769
BmrFI CCNGG 7 cut(s) 222, 312, 501, 603, 693, 997, 1036
BmsI GCATC 3 cut(s) 350, 529, 853
BplI GAGNNNNNCTC 2 cut(s) 188, 220
Bpu14I TTCGAA 1 cut(s) 108
BpuEI CTTGAG 2 cut(s) 119, 959
BpuMI CCSGG 1 cut(s) 222
Bsa29I ATCGAT 1 cut(s) 732
BsaHI GRCGYC 1 cut(s) 768
BsaI GGTCTC 2 cut(s) 321, 382
BsaJI CCNNGG 8 cut(s) 311, 500, 602, 643, 880, 943, 995, 1035
BsaXI ACNNNNNCTCC 2 cut(s) 781, 811
Bsc4I CCNNNNNNNGG 8 cut(s) 83, 220, 221, 395, 524, 692, 1036, 1084
Bse118I RCCGGY 1 cut(s) 908
Bse21I CCTNAGG 1 cut(s) 390
Bse3DI GCAATG 2 cut(s) 280, 436
BseBI CCWGG 6 cut(s) 312, 501, 603, 693, 997, 1036
BseCI ATCGAT 1 cut(s) 732
BseDI CCNNGG 8 cut(s) 311, 500, 602, 643, 880, 943, 995, 1035
BseGI GGATG 2 cut(s) 88, 680
BseLI CCNNNNNNNGG 8 cut(s) 83, 220, 221, 395, 524, 692, 1036, 1084
BseMI GCAATG 2 cut(s) 280, 436
BseMII CTCAG 2 cut(s) 393, 404
BseRI GAGGAG 3 cut(s) 378, 626, 644
BseSI GKGCMC 2 cut(s) 358, 828
BseXI GCAGC 6 cut(s) 17, 74, 438, 863, 952, 998
BsgI GTGCAG 1 cut(s) 552
BshFI GGCC 3 cut(s) 213, 281, 1065
BshNI GGYRCC 1 cut(s) 767
BshVI ATCGAT 1 cut(s) 732
BsiHKAI GWGCWC 3 cut(s) 15, 358, 1057
BsiSI CCGG 3 cut(s) 207, 221, 909
BslFI GGGAC 3 cut(s) 413, 694, 737
BslI CCNNNNNNNGG 8 cut(s) 83, 220, 221, 395, 524, 692, 1036, 1084
BsmAI GTCTC 3 cut(s) 321, 382, 977
BsmFI GGGAC 3 cut(s) 413, 694, 737
BsmI GAATGC 1 cut(s) 29
BsnI GGCC 3 cut(s) 213, 281, 1065
Bso31I GGTCTC 2 cut(s) 321, 382
Bsp119I TTCGAA 1 cut(s) 108
Bsp1286I GDGCHC 5 cut(s) 15, 90, 358, 828, 1057
Bsp1407I TGTACA 1 cut(s) 67
Bsp143I GATC 3 cut(s) 699, 834, 841
Bsp19I CCATGG 1 cut(s) 643
BspACI CCGC 3 cut(s) 210, 215, 954
BspANI GGCC 3 cut(s) 213, 281, 1065
BspCNI CTCAG 2 cut(s) 392, 403
BspDI ATCGAT 1 cut(s) 732
BspLI GGNNCC 4 cut(s) 401, 516, 618, 769
BspMI ACCTGC 1 cut(s) 799
BspPI GGATC 1 cut(s) 707
BspQI GCTCTTC 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 108
BspT107I GGYRCC 1 cut(s) 767
BspTNI GGTCTC 2 cut(s) 321, 382
BsrDI GCAATG 2 cut(s) 280, 436
BsrFI RCCGGY 1 cut(s) 908
BsrGI TGTACA 1 cut(s) 67
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 8 cut(s) 311, 500, 602, 643, 880, 943, 995, 1035
BssMI GATC 3 cut(s) 699, 834, 841
BssNI GRCGYC 1 cut(s) 768
BssT1I CCWWGG 2 cut(s) 643, 943
Bst2UI CCWGG 6 cut(s) 312, 501, 603, 693, 997, 1036
Bst4CI ACNGT 3 cut(s) 145, 823, 884
Bst6I CTCTTC 4 cut(s) 105, 357, 566, 643
BstACI GRCGYC 1 cut(s) 768
BstAUI TGTACA 1 cut(s) 67
BstBI TTCGAA 1 cut(s) 108
BstC8I GCNNGC 3 cut(s) 27, 215, 910
BstDEI CTNAG 5 cut(s) 379, 390, 535, 815, 1101
BstDSI CCRYGG 2 cut(s) 643, 880
BstENI CCTNNNNNAGG 1 cut(s) 393
BstF5I GGATG 2 cut(s) 88, 680
BstH2I RGCGCY 1 cut(s) 771
BstHHI GCGC 2 cut(s) 770, 808
BstKTI GATC 3 cut(s) 702, 837, 844
BstMAI GTCTC 3 cut(s) 321, 382, 977
BstMBI GATC 3 cut(s) 699, 834, 841
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstNI CCWGG 6 cut(s) 312, 501, 603, 693, 997, 1036
BstSCI CCNGG 7 cut(s) 220, 310, 499, 601, 691, 995, 1034
BstSFI CTRYAG 2 cut(s) 421, 1015
BstSLI GKGCMC 2 cut(s) 358, 828
BstV1I GCAGC 6 cut(s) 17, 74, 438, 863, 952, 998
BstX2I RGATCY 1 cut(s) 834
BstYI RGATCY 1 cut(s) 834
Bsu15I ATCGAT 1 cut(s) 732
Bsu36I CCTNAGG 1 cut(s) 390
BsuRI GGCC 3 cut(s) 213, 281, 1065
BsuTUI ATCGAT 1 cut(s) 732
BtgI CCRYGG 2 cut(s) 643, 880
BtgZI GCGATG 1 cut(s) 876
BtsCI GGATG 2 cut(s) 88, 680
BtsI GCAGTG 1 cut(s) 164
BtsIMutI CAGTG 2 cut(s) 164, 387
BveI ACCTGC 1 cut(s) 799
Cac8I GCNNGC 3 cut(s) 27, 215, 910
CfoI GCGC 2 cut(s) 770, 808
Cfr10I RCCGGY 1 cut(s) 908
Cfr13I GGNCC 6 cut(s) 212, 400, 514, 527, 999, 1064
ClaI ATCGAT 1 cut(s) 732
Csp6I GTAC 5 cut(s) 68, 146, 199, 232, 650
CviAII CATG 3 cut(s) 248, 257, 644
CviQI GTAC 5 cut(s) 68, 146, 199, 232, 650
DdeI CTNAG 5 cut(s) 379, 390, 535, 815, 1101
DinI GGCGCC 1 cut(s) 769
DpnI GATC 3 cut(s) 701, 836, 843
DpnII GATC 3 cut(s) 699, 834, 841
Eam1104I CTCTTC 4 cut(s) 105, 357, 566, 643
EarI CTCTTC 4 cut(s) 105, 357, 566, 643
Ecl136II GAGCTC 1 cut(s) 1055
Eco130I CCWWGG 2 cut(s) 643, 943
Eco147I AGGCCT 1 cut(s) 281
Eco24I GRGCYC 2 cut(s) 90, 1057
Eco31I GGTCTC 2 cut(s) 321, 382
Eco47I GGWCC 4 cut(s) 400, 514, 527, 999
Eco53kI GAGCTC 1 cut(s) 1055
Eco81I CCTNAGG 1 cut(s) 390
EcoICRI GAGCTC 1 cut(s) 1055
EcoNI CCTNNNNNAGG 1 cut(s) 393
EcoO109I RGGNCCY 2 cut(s) 400, 514
EcoRII CCWGG 6 cut(s) 310, 499, 601, 691, 995, 1034
EcoT14I CCWWGG 2 cut(s) 643, 943
EcoT38I GRGCYC 2 cut(s) 90, 1057
EgeI GGCGCC 1 cut(s) 769
EheI GGCGCC 1 cut(s) 769
ErhI CCWWGG 2 cut(s) 643, 943
FaeI CATG 3 cut(s) 251, 260, 647
FalI AAGNNNNNCTT 4 cut(s) 545, 577, 905, 937
FaqI GGGAC 3 cut(s) 413, 694, 737
FatI CATG 3 cut(s) 247, 256, 643
FauI CCCGC 2 cut(s) 222, 947
Fnu4HI GCNGC 7 cut(s) 6, 63, 211, 427, 877, 966, 987
FokI GGATG 2 cut(s) 95, 667
FriOI GRGCYC 2 cut(s) 90, 1057
Fsp4HI GCNGC 7 cut(s) 6, 63, 211, 427, 877, 966, 987
FspBI CTAG 4 cut(s) 579, 671, 969, 1073
GlaI GCGC 2 cut(s) 769, 807
GluI GCNGC 7 cut(s) 6, 63, 211, 427, 877, 966, 987
HaeII RGCGCY 1 cut(s) 771
HaeIII GGCC 3 cut(s) 213, 281, 1065
HapII CCGG 3 cut(s) 207, 221, 909
HhaI GCGC 2 cut(s) 770, 808
Hin1I GRCGYC 1 cut(s) 768
Hin1II CATG 3 cut(s) 251, 260, 647
Hin6I GCGC 2 cut(s) 768, 806
HinP1I GCGC 2 cut(s) 768, 806
HinfI GANTC 3 cut(s) 415, 707, 734
HpaII CCGG 3 cut(s) 207, 221, 909
HphI GGTGA 4 cut(s) 316, 449, 928, 984
Hpy166II GTNNAC 4 cut(s) 45, 356, 650, 1090
Hpy188I TCNGA 2 cut(s) 461, 596
Hpy188III TCNNGA 3 cut(s) 91, 136, 509
Hpy8I GTNNAC 4 cut(s) 45, 356, 650, 1090
HpyAV CCTTC 3 cut(s) 413, 698, 943
HpyCH4III ACNGT 3 cut(s) 145, 823, 884
HpyCH4V TGCA 9 cut(s) 29, 62, 164, 356, 412, 542, 569, 785, 866
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 5 cut(s) 379, 390, 535, 815, 1101
Hsp92I GRCGYC 1 cut(s) 768
Hsp92II CATG 3 cut(s) 251, 260, 647
HspAI GCGC 2 cut(s) 768, 806
KasI GGCGCC 1 cut(s) 767
KroI GCCGGC 1 cut(s) 908
KroNI GCCGGC 1 cut(s) 910
Kzo9I GATC 3 cut(s) 699, 834, 841
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 2 cut(s) 622, 1052
Lsp1109I GCAGC 6 cut(s) 17, 74, 438, 863, 952, 998
LweI GCATC 3 cut(s) 350, 529, 853
MaeI CTAG 4 cut(s) 579, 671, 969, 1073
MaeIII GTNAC 2 cut(s) 484, 676
MalI GATC 3 cut(s) 701, 836, 843
MboI GATC 3 cut(s) 699, 834, 841
MboII GAAGA 5 cut(s) 11, 122, 374, 553, 630
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 1 cut(s) 834
MhlI GDGCHC 5 cut(s) 15, 90, 358, 828, 1057
MluCI AATT 3 cut(s) 543, 586, 1005
Mly113I GGCGCC 1 cut(s) 768
MlyI GAGTC 2 cut(s) 409, 716
MroNI GCCGGC 1 cut(s) 908
MseI TTAA 1 cut(s) 923
MslI CAYNNNNRTG 2 cut(s) 302, 747
MspA1I CMGCKG 2 cut(s) 8, 65
MspI CCGG 3 cut(s) 207, 221, 909
MspR9I CCNGG 7 cut(s) 222, 312, 501, 603, 693, 997, 1036
MunI CAATTG 1 cut(s) 543
Mva1269I GAATGC 1 cut(s) 29
MvaI CCWGG 6 cut(s) 312, 501, 603, 693, 997, 1036
MwoI GCNNNNNNNGC 1 cut(s) 62
NaeI GCCGGC 1 cut(s) 910
NarI GGCGCC 1 cut(s) 768
NciI CCSGG 1 cut(s) 222
NcoI CCATGG 1 cut(s) 643
NdeII GATC 3 cut(s) 699, 834, 841
NgoMIV GCCGGC 1 cut(s) 908
NlaIII CATG 3 cut(s) 251, 260, 647
NlaIV GGNNCC 4 cut(s) 401, 516, 618, 769
NmuCI GTSAC 2 cut(s) 484, 676
NspV TTCGAA 1 cut(s) 108
PceI AGGCCT 1 cut(s) 281
PciSI GCTCTTC 1 cut(s) 105
PctI GAATGC 1 cut(s) 29
PdiI GCCGGC 1 cut(s) 910
PfeI GAWTC 1 cut(s) 734
PkrI GCNGC 7 cut(s) 7, 64, 212, 428, 878, 967, 988
PleI GAGTC 2 cut(s) 409, 715
PluTI GGCGCC 1 cut(s) 771
PpsI GAGTC 2 cut(s) 409, 715
PpuMI RGGWCCY 2 cut(s) 400, 514
Psp124BI GAGCTC 1 cut(s) 1057
Psp5II RGGWCCY 2 cut(s) 400, 514
Psp6I CCWGG 6 cut(s) 310, 499, 601, 691, 995, 1034
PspGI CCWGG 6 cut(s) 310, 499, 601, 691, 995, 1034
PspN4I GGNNCC 4 cut(s) 401, 516, 618, 769
PspPI GGNCC 6 cut(s) 212, 400, 514, 527, 999, 1064
PspPPI RGGWCCY 2 cut(s) 400, 514
PsuI RGATCY 1 cut(s) 834
PvuII CAGCTG 2 cut(s) 8, 65
RsaI GTAC 5 cut(s) 69, 147, 200, 233, 651
RsaNI GTAC 5 cut(s) 68, 146, 199, 232, 650
RseI CAYNNNNRTG 2 cut(s) 302, 747
SacI GAGCTC 1 cut(s) 1057
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 1 cut(s) 923
SatI GCNGC 7 cut(s) 6, 63, 211, 427, 877, 966, 987
Sau3AI GATC 3 cut(s) 699, 834, 841
Sau96I GGNCC 6 cut(s) 212, 400, 514, 527, 999, 1064
ScaI AGTACT 1 cut(s) 147
SchI GAGTC 2 cut(s) 409, 716
ScrFI CCNGG 7 cut(s) 222, 312, 501, 603, 693, 997, 1036
SduI GDGCHC 5 cut(s) 15, 90, 358, 828, 1057
SfaNI GCATC 3 cut(s) 350, 529, 853
SfcI CTRYAG 2 cut(s) 421, 1015
SfoI GGCGCC 1 cut(s) 769
SfuI TTCGAA 1 cut(s) 108
SinI GGWCC 4 cut(s) 400, 514, 527, 999
SmiMI CAYNNNNRTG 2 cut(s) 302, 747
SmlI CTYRAG 2 cut(s) 134, 974
SmoI CTYRAG 2 cut(s) 134, 974
Sse9I AATT 3 cut(s) 543, 586, 1005
SseBI AGGCCT 1 cut(s) 281
SsiI CCGC 3 cut(s) 210, 215, 954
SspDI GGCGCC 1 cut(s) 767
SspMI CTAG 4 cut(s) 579, 671, 969, 1073
SstI GAGCTC 1 cut(s) 1057
StuI AGGCCT 1 cut(s) 281
StyD4I CCNGG 7 cut(s) 220, 310, 499, 601, 691, 995, 1034
StyI CCWWGG 2 cut(s) 643, 943
TaaI ACNGT 3 cut(s) 145, 823, 884
TaqI TCGA 4 cut(s) 108, 705, 732, 887
TasI AATT 3 cut(s) 543, 586, 1005
TatI WGTACW 5 cut(s) 67, 145, 198, 231, 649
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 1 cut(s) 734
Tru1I TTAA 1 cut(s) 923
Tru9I TTAA 1 cut(s) 923
TscAI CASTG 2 cut(s) 171, 387
TseFI GTSAC 2 cut(s) 484, 676
TseI GCWGC 6 cut(s) 5, 62, 426, 876, 965, 986
Tsp45I GTSAC 2 cut(s) 484, 676
TspDTI ATGAA 2 cut(s) 245, 718
TspGWI ACGGA 1 cut(s) 1065
TspRI CASTG 2 cut(s) 171, 387
VneI GTGCAC 1 cut(s) 354
VpaK11BI GGWCC 4 cut(s) 400, 514, 527, 999
XagI CCTNNNNNAGG 1 cut(s) 393
XspI CTAG 4 cut(s) 579, 671, 969, 1073
ZrmI AGTACT 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.