Protein of unknown function (DUF642)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08030 AT3G08030 |
| fragaria_vesca | FvH4_7g01370 FvH4_7g01370 FvH4_7g01370 FvH4_7g01370 |
| malus_domestica | MD02G1307700.v1.1 |
| prunus_persica | Prupe.2G017800_v2.0.a1 Prupe.2G017800_v2.0.a1 |
| pyrus_communis | pycom02g25890 pycom07g01380 |
| rosa_chinensis | RchiOBHm_Chr1g0317061 |
| rosa_laevigata | RLG00000030629 |
| rosa_multiflora | Rmu_co8457401.1_g000001 Rmu_sc0018727.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00330690 |
| rosa_rugosa | Rorug01G0014200 |
| rosa_samantha | Rh1AG025300 Rh1BG022100 Rh1CG023700 Rh1DG022500 |
| rosa_wichuraiana | Rw1G001760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 394 |
| AccB1I | GGYRCC | 1 cut(s) | 394 |
| AccBSI | CCGCTC | 1 cut(s) | 700 |
| AciI | CCGC | 8 cut(s) | 219, 227, 237, 447, 698, 797, 966, 998 |
| AclWI | GGATC | 4 cut(s) | 521, 534, 719, 904 |
| AcoI | YGGCCR | 1 cut(s) | 105 |
| AcuI | CTGAAG | 1 cut(s) | 1012 |
| AcyI | GRCGYC | 1 cut(s) | 264 |
| AfaI | GTAC | 5 cut(s) | 212, 245, 396, 584, 663 |
| AgsI | TTSAA | 8 cut(s) | 122, 521, 623, 760, 911, 973, 994, 1005 |
| AjnI | CCWGG | 5 cut(s) | 201, 322, 402, 511, 613 |
| AluBI | AGCT | 7 cut(s) | 83, 257, 571, 790, 847, 1032, 1061 |
| AluI | AGCT | 7 cut(s) | 83, 257, 571, 790, 847, 1032, 1061 |
| Alw21I | GWGCWC | 1 cut(s) | 1063 |
| AlwI | GGATC | 4 cut(s) | 521, 534, 719, 904 |
| AoxI | GGCC | 8 cut(s) | 105, 199, 224, 291, 538, 729, 978, 1069 |
| ApeKI | GCWGC | 4 cut(s) | 58, 80, 438, 888 |
| Asp718I | GGTACC | 1 cut(s) | 394 |
| AspS9I | GGNCC | 5 cut(s) | 224, 412, 539, 1011, 1070 |
| AsuC2I | CCSGG | 3 cut(s) | 223, 234, 705 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 856, 884 |
| AvaII | GGWCC | 2 cut(s) | 412, 1011 |
| AxyI | CCTNAGG | 1 cut(s) | 146 |
| BaeGI | GKGCMC | 1 cut(s) | 370 |
| BalI | TGGCCA | 1 cut(s) | 107 |
| BamHI | GGATCC | 1 cut(s) | 526 |
| BanI | GGYRCC | 1 cut(s) | 394 |
| BanII | GRGCYC | 1 cut(s) | 1063 |
| Bbv12I | GWGCWC | 1 cut(s) | 1063 |
| BbvI | GCAGC | 4 cut(s) | 45, 92, 450, 875 |
| BccI | CCATC | 3 cut(s) | 89, 191, 898 |
| BceAI | ACGGC | 2 cut(s) | 716, 901 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 440, 474 |
| BciT130I | CCWGG | 5 cut(s) | 203, 324, 404, 513, 615 |
| BcnI | CCSGG | 3 cut(s) | 223, 234, 705 |
| BfaI | CTAG | 3 cut(s) | 591, 683, 1079 |
| BfmI | CTRYAG | 2 cut(s) | 78, 850 |
| BisI | GCNGC | 6 cut(s) | 59, 81, 227, 439, 448, 889 |
| BlsI | GCNGC | 6 cut(s) | 60, 82, 228, 440, 449, 890 |
| Bme1390I | CCNGG | 8 cut(s) | 203, 223, 234, 324, 404, 513, 615, 705 |
| Bme18I | GGWCC | 2 cut(s) | 412, 1011 |
| BmgT120I | GGNCC | 5 cut(s) | 224, 412, 539, 1011, 1070 |
| BmiI | GGNNCC | 4 cut(s) | 396, 413, 528, 630 |
| BmrFI | CCNGG | 8 cut(s) | 203, 223, 234, 324, 404, 513, 615, 705 |
| BmrI | ACTGGG | 1 cut(s) | 27 |
| BmsI | GCATC | 4 cut(s) | 362, 541, 676, 865 |
| BmuI | ACTGGG | 1 cut(s) | 27 |
| BpuEI | CTTGAG | 1 cut(s) | 710 |
| BpuMI | CCSGG | 3 cut(s) | 223, 234, 705 |
| Bsa29I | ATCGAT | 2 cut(s) | 195, 744 |
| BsaBI | GATNNNNATC | 1 cut(s) | 750 |
| BsaHI | GRCGYC | 1 cut(s) | 264 |
| BsaJI | CCNNGG | 7 cut(s) | 402, 512, 613, 655, 703, 892, 1047 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 793, 823 |
| Bse118I | RCCGGY | 1 cut(s) | 920 |
| Bse1I | ACTGG | 3 cut(s) | 22, 767, 981 |
| Bse21I | CCTNAGG | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 4 cut(s) | 53, 292, 448, 555 |
| Bse8I | GATNNNNATC | 1 cut(s) | 750 |
| BseBI | CCWGG | 5 cut(s) | 203, 324, 404, 513, 615 |
| BseCI | ATCGAT | 2 cut(s) | 195, 744 |
| BseDI | CCNNGG | 7 cut(s) | 402, 512, 613, 655, 703, 892, 1047 |
| BseGI | GGATG | 3 cut(s) | 100, 556, 692 |
| BseJI | GATNNNNATC | 1 cut(s) | 750 |
| BseMI | GCAATG | 4 cut(s) | 53, 292, 448, 555 |
| BseMII | CTCAG | 1 cut(s) | 160 |
| BseNI | ACTGG | 3 cut(s) | 22, 767, 981 |
| BseRI | GAGGAG | 2 cut(s) | 389, 656 |
| BseSI | GKGCMC | 1 cut(s) | 370 |
| BseXI | GCAGC | 4 cut(s) | 45, 92, 450, 875 |
| BshFI | GGCC | 8 cut(s) | 107, 201, 226, 293, 540, 731, 980, 1071 |
| BshNI | GGYRCC | 1 cut(s) | 394 |
| BshVI | ATCGAT | 2 cut(s) | 195, 744 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1063 |
| BsiSI | CCGG | 4 cut(s) | 222, 234, 705, 921 |
| BslFI | GGGAC | 2 cut(s) | 425, 706 |
| BsmFI | GGGAC | 2 cut(s) | 425, 706 |
| BsmI | GAATGC | 1 cut(s) | 47 |
| BsnI | GGCC | 8 cut(s) | 107, 201, 226, 293, 540, 731, 980, 1071 |
| Bsp1286I | GDGCHC | 2 cut(s) | 370, 1063 |
| Bsp143I | GATC | 3 cut(s) | 526, 711, 896 |
| Bsp19I | CCATGG | 1 cut(s) | 655 |
| BspACI | CCGC | 8 cut(s) | 219, 227, 237, 447, 698, 797, 966, 998 |
| BspANI | GGCC | 8 cut(s) | 107, 201, 226, 293, 540, 731, 980, 1071 |
| BspCNI | CTCAG | 1 cut(s) | 159 |
| BspDI | ATCGAT | 2 cut(s) | 195, 744 |
| BspLI | GGNNCC | 4 cut(s) | 396, 413, 528, 630 |
| BspMAI | CTGCAG | 1 cut(s) | 82 |
| BspPI | GGATC | 4 cut(s) | 521, 534, 719, 904 |
| BspQI | GCTCTTC | 1 cut(s) | 117 |
| BspT107I | GGYRCC | 1 cut(s) | 394 |
| BsrBI | CCGCTC | 1 cut(s) | 700 |
| BsrDI | GCAATG | 4 cut(s) | 53, 292, 448, 555 |
| BsrFI | RCCGGY | 1 cut(s) | 920 |
| BsrI | ACTGG | 3 cut(s) | 22, 767, 981 |
| BssAI | RCCGGY | 1 cut(s) | 920 |
| BssECI | CCNNGG | 7 cut(s) | 402, 512, 613, 655, 703, 892, 1047 |
| BssMI | GATC | 3 cut(s) | 526, 711, 896 |
| BssNI | GRCGYC | 1 cut(s) | 264 |
| BssT1I | CCWWGG | 3 cut(s) | 655, 892, 1047 |
| Bst2UI | CCWGG | 5 cut(s) | 203, 324, 404, 513, 615 |
| Bst4CI | ACNGT | 3 cut(s) | 490, 835, 868 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 618, 655 |
| BstACI | GRCGYC | 1 cut(s) | 264 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 482 |
| BstC8I | GCNNGC | 3 cut(s) | 45, 63, 922 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstDSI | CCRYGG | 1 cut(s) | 655 |
| BstF5I | GGATG | 3 cut(s) | 100, 556, 692 |
| BstKTI | GATC | 3 cut(s) | 529, 714, 899 |
| BstMBI | GATC | 3 cut(s) | 526, 711, 896 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 71, 80, 444, 447, 482 |
| BstNI | CCWGG | 5 cut(s) | 203, 324, 404, 513, 615 |
| BstSCI | CCNGG | 8 cut(s) | 201, 221, 232, 322, 402, 511, 613, 703 |
| BstSFI | CTRYAG | 2 cut(s) | 78, 850 |
| BstSLI | GKGCMC | 1 cut(s) | 370 |
| BstV1I | GCAGC | 4 cut(s) | 45, 92, 450, 875 |
| BstX2I | RGATCY | 1 cut(s) | 526 |
| BstYI | RGATCY | 1 cut(s) | 526 |
| Bsu15I | ATCGAT | 2 cut(s) | 195, 744 |
| Bsu36I | CCTNAGG | 1 cut(s) | 146 |
| BsuRI | GGCC | 8 cut(s) | 107, 201, 226, 293, 540, 731, 980, 1071 |
| BsuTUI | ATCGAT | 2 cut(s) | 195, 744 |
| BtgI | CCRYGG | 1 cut(s) | 655 |
| BtsCI | GGATG | 3 cut(s) | 100, 556, 692 |
| BtsI | GCAGTG | 1 cut(s) | 176 |
| BtsIMutI | CAGTG | 1 cut(s) | 176 |
| Cac8I | GCNNGC | 3 cut(s) | 45, 63, 922 |
| Cfr10I | RCCGGY | 1 cut(s) | 920 |
| Cfr13I | GGNCC | 5 cut(s) | 224, 412, 539, 1011, 1070 |
| ClaI | ATCGAT | 2 cut(s) | 195, 744 |
| CseI | GACGC | 1 cut(s) | 253 |
| Csp6I | GTAC | 5 cut(s) | 211, 244, 395, 583, 662 |
| CviAII | CATG | 3 cut(s) | 260, 269, 656 |
| CviQI | GTAC | 5 cut(s) | 211, 244, 395, 583, 662 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 3 cut(s) | 528, 713, 898 |
| DpnII | GATC | 3 cut(s) | 526, 711, 896 |
| EaeI | YGGCCR | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 618, 655 |
| EarI | CTCTTC | 3 cut(s) | 117, 618, 655 |
| EciI | GGCGGA | 2 cut(s) | 208, 252 |
| Ecl136II | GAGCTC | 1 cut(s) | 1061 |
| Eco130I | CCWWGG | 3 cut(s) | 655, 892, 1047 |
| Eco147I | AGGCCT | 1 cut(s) | 293 |
| Eco24I | GRGCYC | 1 cut(s) | 1063 |
| Eco47I | GGWCC | 2 cut(s) | 412, 1011 |
| Eco53kI | GAGCTC | 1 cut(s) | 1061 |
| Eco57I | CTGAAG | 1 cut(s) | 1012 |
| Eco81I | CCTNAGG | 1 cut(s) | 146 |
| EcoICRI | GAGCTC | 1 cut(s) | 1061 |
| EcoO109I | RGGNCCY | 1 cut(s) | 412 |
| EcoRII | CCWGG | 5 cut(s) | 201, 322, 402, 511, 613 |
| EcoT14I | CCWWGG | 3 cut(s) | 655, 892, 1047 |
| EcoT38I | GRGCYC | 1 cut(s) | 1063 |
| ErhI | CCWWGG | 3 cut(s) | 655, 892, 1047 |
| FaeI | CATG | 3 cut(s) | 263, 272, 659 |
| FaqI | GGGAC | 2 cut(s) | 425, 706 |
| FatI | CATG | 3 cut(s) | 259, 268, 655 |
| FauI | CCCGC | 3 cut(s) | 705, 790, 959 |
| Fnu4HI | GCNGC | 6 cut(s) | 59, 81, 227, 439, 448, 889 |
| FokI | GGATG | 3 cut(s) | 107, 563, 679 |
| FriOI | GRGCYC | 1 cut(s) | 1063 |
| Fsp4HI | GCNGC | 6 cut(s) | 59, 81, 227, 439, 448, 889 |
| FspBI | CTAG | 3 cut(s) | 591, 683, 1079 |
| GluI | GCNGC | 6 cut(s) | 59, 81, 227, 439, 448, 889 |
| HaeIII | GGCC | 8 cut(s) | 107, 201, 226, 293, 540, 731, 980, 1071 |
| HapII | CCGG | 4 cut(s) | 222, 234, 705, 921 |
| HgaI | GACGC | 1 cut(s) | 253 |
| Hin1I | GRCGYC | 1 cut(s) | 264 |
| Hin1II | CATG | 3 cut(s) | 263, 272, 659 |
| HinfI | GANTC | 5 cut(s) | 99, 468, 719, 746, 1017 |
| HpaII | CCGG | 4 cut(s) | 222, 234, 705, 921 |
| HphI | GGTGA | 3 cut(s) | 16, 856, 884 |
| Hpy166II | GTNNAC | 2 cut(s) | 583, 662 |
| Hpy188I | TCNGA | 4 cut(s) | 473, 608, 675, 773 |
| Hpy188III | TCNNGA | 6 cut(s) | 92, 148, 521, 829, 973, 1009 |
| Hpy8I | GTNNAC | 2 cut(s) | 583, 662 |
| Hpy99I | CGWCG | 1 cut(s) | 872 |
| HpyAV | CCTTC | 4 cut(s) | 425, 955, 970, 1045 |
| HpyCH4III | ACNGT | 3 cut(s) | 490, 835, 868 |
| HpyCH4IV | ACGT | 1 cut(s) | 1022 |
| HpyCH4V | TGCA | 6 cut(s) | 47, 80, 176, 424, 485, 878 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 71, 80, 444, 447, 482 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| HpySE526I | ACGT | 1 cut(s) | 1022 |
| Hsp92I | GRCGYC | 1 cut(s) | 264 |
| Hsp92II | CATG | 3 cut(s) | 263, 272, 659 |
| KpnI | GGTACC | 1 cut(s) | 398 |
| KroI | GCCGGC | 1 cut(s) | 920 |
| KroNI | GCCGGC | 1 cut(s) | 922 |
| Kzo9I | GATC | 3 cut(s) | 526, 711, 896 |
| LguI | GCTCTTC | 1 cut(s) | 117 |
| LmnI | GCTCC | 5 cut(s) | 568, 634, 705, 1037, 1058 |
| Lsp1109I | GCAGC | 4 cut(s) | 45, 92, 450, 875 |
| LweI | GCATC | 4 cut(s) | 362, 541, 676, 865 |
| MaeI | CTAG | 3 cut(s) | 591, 683, 1079 |
| MaeII | ACGT | 1 cut(s) | 1022 |
| MaeIII | GTNAC | 1 cut(s) | 496 |
| MalI | GATC | 3 cut(s) | 528, 713, 898 |
| MbiI | CCGCTC | 1 cut(s) | 700 |
| MboI | GATC | 3 cut(s) | 526, 711, 896 |
| MboII | GAAGA | 4 cut(s) | 134, 635, 642, 1018 |
| MflI | RGATCY | 1 cut(s) | 526 |
| MhlI | GDGCHC | 2 cut(s) | 370, 1063 |
| MlsI | TGGCCA | 1 cut(s) | 107 |
| MluCI | AATT | 1 cut(s) | 598 |
| MluNI | TGGCCA | 1 cut(s) | 107 |
| MlyI | GAGTC | 2 cut(s) | 93, 728 |
| MmeI | TCCRAC | 1 cut(s) | 751 |
| Mox20I | TGGCCA | 1 cut(s) | 107 |
| MroNI | GCCGGC | 1 cut(s) | 920 |
| MscI | TGGCCA | 1 cut(s) | 107 |
| MseI | TTAA | 6 cut(s) | 249, 312, 492, 644, 1089, 1108 |
| MslI | CAYNNNNRTG | 1 cut(s) | 759 |
| Msp20I | TGGCCA | 1 cut(s) | 107 |
| MspA1I | CMGCKG | 1 cut(s) | 83 |
| MspI | CCGG | 4 cut(s) | 222, 234, 705, 921 |
| MspR9I | CCNGG | 8 cut(s) | 203, 223, 234, 324, 404, 513, 615, 705 |
| Mva1269I | GAATGC | 1 cut(s) | 47 |
| MvaI | CCWGG | 5 cut(s) | 203, 324, 404, 513, 615 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 71, 80, 444, 447, 482 |
| NaeI | GCCGGC | 1 cut(s) | 922 |
| NciI | CCSGG | 3 cut(s) | 223, 234, 705 |
| NcoI | CCATGG | 1 cut(s) | 655 |
| NdeII | GATC | 3 cut(s) | 526, 711, 896 |
| NgoMIV | GCCGGC | 1 cut(s) | 920 |
| NlaIII | CATG | 3 cut(s) | 263, 272, 659 |
| NlaIV | GGNNCC | 4 cut(s) | 396, 413, 528, 630 |
| NmuCI | GTSAC | 1 cut(s) | 496 |
| PceI | AGGCCT | 1 cut(s) | 293 |
| PciSI | GCTCTTC | 1 cut(s) | 117 |
| PctI | GAATGC | 1 cut(s) | 47 |
| PdiI | GCCGGC | 1 cut(s) | 922 |
| PfeI | GAWTC | 3 cut(s) | 468, 746, 1017 |
| PkrI | GCNGC | 6 cut(s) | 60, 82, 228, 440, 449, 890 |
| PleI | GAGTC | 2 cut(s) | 93, 727 |
| PpsI | GAGTC | 2 cut(s) | 93, 727 |
| PpuMI | RGGWCCY | 1 cut(s) | 412 |
| Psp124BI | GAGCTC | 1 cut(s) | 1063 |
| Psp5II | RGGWCCY | 1 cut(s) | 412 |
| Psp6I | CCWGG | 5 cut(s) | 201, 322, 402, 511, 613 |
| PspGI | CCWGG | 5 cut(s) | 201, 322, 402, 511, 613 |
| PspN4I | GGNNCC | 4 cut(s) | 396, 413, 528, 630 |
| PspPI | GGNCC | 5 cut(s) | 224, 412, 539, 1011, 1070 |
| PspPPI | RGGWCCY | 1 cut(s) | 412 |
| PstI | CTGCAG | 1 cut(s) | 82 |
| PsuI | RGATCY | 1 cut(s) | 526 |
| PvuII | CAGCTG | 1 cut(s) | 83 |
| RsaI | GTAC | 5 cut(s) | 212, 245, 396, 584, 663 |
| RsaNI | GTAC | 5 cut(s) | 211, 244, 395, 583, 662 |
| RseI | CAYNNNNRTG | 1 cut(s) | 759 |
| SacI | GAGCTC | 1 cut(s) | 1063 |
| SapI | GCTCTTC | 1 cut(s) | 117 |
| SaqAI | TTAA | 6 cut(s) | 249, 312, 492, 644, 1089, 1108 |
| SatI | GCNGC | 6 cut(s) | 59, 81, 227, 439, 448, 889 |
| Sau3AI | GATC | 3 cut(s) | 526, 711, 896 |
| Sau96I | GGNCC | 5 cut(s) | 224, 412, 539, 1011, 1070 |
| SchI | GAGTC | 2 cut(s) | 93, 728 |
| ScrFI | CCNGG | 8 cut(s) | 203, 223, 234, 324, 404, 513, 615, 705 |
| SduI | GDGCHC | 2 cut(s) | 370, 1063 |
| SfaNI | GCATC | 4 cut(s) | 362, 541, 676, 865 |
| SfcI | CTRYAG | 2 cut(s) | 78, 850 |
| SinI | GGWCC | 2 cut(s) | 412, 1011 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 759 |
| SmlI | CTYRAG | 1 cut(s) | 725 |
| SmoI | CTYRAG | 1 cut(s) | 725 |
| Sse9I | AATT | 1 cut(s) | 598 |
| SseBI | AGGCCT | 1 cut(s) | 293 |
| SsiI | CCGC | 8 cut(s) | 219, 227, 237, 447, 698, 797, 966, 998 |
| SspMI | CTAG | 3 cut(s) | 591, 683, 1079 |
| SstI | GAGCTC | 1 cut(s) | 1063 |
| StuI | AGGCCT | 1 cut(s) | 293 |
| StyD4I | CCNGG | 8 cut(s) | 201, 221, 232, 322, 402, 511, 613, 703 |
| StyI | CCWWGG | 3 cut(s) | 655, 892, 1047 |
| TaaI | ACNGT | 3 cut(s) | 490, 835, 868 |
| TaiI | ACGT | 1 cut(s) | 1025 |
| TaqI | TCGA | 3 cut(s) | 195, 717, 744 |
| TasI | AATT | 1 cut(s) | 598 |
| TatI | WGTACW | 3 cut(s) | 210, 243, 661 |
| TauI | GCSGC | 2 cut(s) | 229, 450 |
| TfiI | GAWTC | 3 cut(s) | 468, 746, 1017 |
| Tru1I | TTAA | 6 cut(s) | 249, 312, 492, 644, 1089, 1108 |
| Tru9I | TTAA | 6 cut(s) | 249, 312, 492, 644, 1089, 1108 |
| TscAI | CASTG | 1 cut(s) | 183 |
| TseFI | GTSAC | 1 cut(s) | 496 |
| TseI | GCWGC | 4 cut(s) | 58, 80, 438, 888 |
| Tsp45I | GTSAC | 1 cut(s) | 496 |
| TspDTI | ATGAA | 2 cut(s) | 730, 1098 |
| TspRI | CASTG | 1 cut(s) | 183 |
| VpaK11BI | GGWCC | 2 cut(s) | 412, 1011 |
| XspI | CTAG | 3 cut(s) | 591, 683, 1079 |