Bacterial extracellular solute-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G31410 |
| fragaria_vesca | FvH4_3g41920 FvH4_3g41920 FvH4_3g41920 |
| malus_domestica | MD07G1026800.v1.1 |
| prunus_persica | Prupe.2G060600_v2.0.a1 Prupe.2G060600_v2.0.a1 |
| pyrus_communis | pycom07g02020 pycom07g02060 |
| rosa_chinensis | RchiOBHm_Chr1g0331171 |
| rosa_laevigata | RLG00000029748 |
| rosa_multiflora | Rmu_sc0005711.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00319290 |
| rosa_rugosa | Rorug01G0091900 Rorug01G0092000 |
| rosa_samantha | Rh1AG116000 Rh1BG087700 Rh1CG111500 Rh1DG120400 |
| rosa_wichuraiana | Rw1G009320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 37, 205 |
| AccBSI | CCGCTC | 1 cut(s) | 1330 |
| AciI | CCGC | 8 cut(s) | 148, 264, 300, 317, 344, 793, 1328, 1433 |
| AclWI | GGATC | 1 cut(s) | 812 |
| AcsI | RAATTY | 4 cut(s) | 887, 1529, 1650, 1669 |
| AcuI | CTGAAG | 1 cut(s) | 1682 |
| AcyI | GRCGYC | 1 cut(s) | 206 |
| AfaI | GTAC | 3 cut(s) | 483, 1007, 1500 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 246, 343, 355, 734, 735, 1235 |
| AflIII | ACRYGT | 1 cut(s) | 1632 |
| AjnI | CCWGG | 3 cut(s) | 337, 348, 747 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 429, 461 |
| AluBI | AGCT | 5 cut(s) | 94, 368, 665, 1241, 1453 |
| AluI | AGCT | 5 cut(s) | 94, 368, 665, 1241, 1453 |
| Alw21I | GWGCWC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| Alw26I | GTCTC | 1 cut(s) | 1282 |
| Alw44I | GTGCAC | 1 cut(s) | 1121 |
| AlwI | GGATC | 1 cut(s) | 812 |
| Ama87I | CYCGRG | 1 cut(s) | 1368 |
| AoxI | GGCC | 5 cut(s) | 158, 297, 306, 621, 1319 |
| ApaLI | GTGCAC | 1 cut(s) | 1121 |
| ApoI | RAATTY | 4 cut(s) | 887, 1529, 1650, 1669 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 457, 469, 489, 501 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 729, 958 |
| AspLEI | GCGC | 1 cut(s) | 208 |
| AspS9I | GGNCC | 6 cut(s) | 297, 307, 346, 644, 1102, 1319 |
| AsuC2I | CCSGG | 1 cut(s) | 1401 |
| AsuHPI | GGTGA | 3 cut(s) | 88, 398, 877 |
| AvaI | CYCGRG | 1 cut(s) | 1368 |
| AvaII | GGWCC | 3 cut(s) | 346, 644, 1102 |
| BaeGI | GKGCMC | 1 cut(s) | 1125 |
| BanI | GGYRCC | 2 cut(s) | 37, 205 |
| BanII | GRGCYC | 1 cut(s) | 1455 |
| BbsI | GAAGAC | 1 cut(s) | 750 |
| Bbv12I | GWGCWC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| BbvCI | CCTCAGC | 1 cut(s) | 182 |
| BbvI | GCAGC | 8 cut(s) | 4, 226, 241, 452, 484, 674, 826, 845 |
| BceAI | ACGGC | 2 cut(s) | 212, 1525 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1349, 1383 |
| BciT130I | CCWGG | 3 cut(s) | 339, 350, 749 |
| BcnI | CCSGG | 1 cut(s) | 1401 |
| BcoDI | GTCTC | 1 cut(s) | 1282 |
| BfaI | CTAG | 4 cut(s) | 978, 1242, 1584, 1617 |
| BfmI | CTRYAG | 1 cut(s) | 912 |
| BfoI | RGCGCY | 1 cut(s) | 209 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 305 |
| Bme1390I | CCNGG | 4 cut(s) | 339, 350, 749, 1401 |
| Bme18I | GGWCC | 3 cut(s) | 346, 644, 1102 |
| BmeT110I | CYCGRG | 1 cut(s) | 1368 |
| BmgT120I | GGNCC | 6 cut(s) | 297, 307, 346, 644, 1102, 1319 |
| BmiI | GGNNCC | 4 cut(s) | 39, 207, 909, 1539 |
| BmrFI | CCNGG | 4 cut(s) | 339, 350, 749, 1401 |
| BmrI | ACTGGG | 1 cut(s) | 931 |
| BmsI | GCATC | 4 cut(s) | 609, 1025, 1054, 1415 |
| BmuI | ACTGGG | 1 cut(s) | 931 |
| BpiI | GAAGAC | 1 cut(s) | 750 |
| BpmI | CTGGAG | 1 cut(s) | 371 |
| Bpu10I | CCTNAGC | 1 cut(s) | 182 |
| BpuEI | CTTGAG | 3 cut(s) | 354, 534, 614 |
| BpuMI | CCSGG | 1 cut(s) | 1401 |
| BsaHI | GRCGYC | 1 cut(s) | 206 |
| BsaJI | CCNNGG | 3 cut(s) | 337, 338, 1399 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 129, 159 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 246, 343, 355, 734, 735, 1235 |
| Bse1I | ACTGG | 3 cut(s) | 758, 926, 1479 |
| BseBI | CCWGG | 3 cut(s) | 339, 350, 749 |
| BseDI | CCNNGG | 3 cut(s) | 337, 338, 1399 |
| BseGI | GGATG | 5 cut(s) | 1035, 1164, 1332, 1406, 1609 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 246, 343, 355, 734, 735, 1235 |
| BseMII | CTCAG | 5 cut(s) | 196, 248, 709, 795, 1523 |
| BseNI | ACTGG | 3 cut(s) | 758, 926, 1479 |
| BseRI | GAGGAG | 2 cut(s) | 368, 371 |
| BseSI | GKGCMC | 1 cut(s) | 1125 |
| BseXI | GCAGC | 8 cut(s) | 4, 226, 241, 452, 484, 674, 826, 845 |
| BseYI | CCCAGC | 1 cut(s) | 852 |
| BsgI | GTGCAG | 1 cut(s) | 1014 |
| BshFI | GGCC | 5 cut(s) | 160, 299, 308, 623, 1321 |
| BshNI | GGYRCC | 2 cut(s) | 37, 205 |
| BsiHKAI | GWGCWC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1368 |
| BsiSI | CCGG | 3 cut(s) | 203, 209, 1401 |
| BslFI | GGGAC | 2 cut(s) | 565, 1382 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 246, 343, 355, 734, 735, 1235 |
| BsmAI | GTCTC | 1 cut(s) | 1282 |
| BsmFI | GGGAC | 2 cut(s) | 565, 1382 |
| BsmI | GAATGC | 1 cut(s) | 1624 |
| BsnI | GGCC | 5 cut(s) | 160, 299, 308, 623, 1321 |
| BsoBI | CYCGRG | 1 cut(s) | 1368 |
| Bsp1286I | GDGCHC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| Bsp143I | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| BspACI | CCGC | 8 cut(s) | 148, 264, 300, 317, 344, 793, 1328, 1433 |
| BspANI | GGCC | 5 cut(s) | 160, 299, 308, 623, 1321 |
| BspCNI | CTCAG | 5 cut(s) | 195, 247, 708, 796, 1522 |
| BspLI | GGNNCC | 4 cut(s) | 39, 207, 909, 1539 |
| BspPI | GGATC | 1 cut(s) | 812 |
| BspT107I | GGYRCC | 2 cut(s) | 37, 205 |
| BsrBI | CCGCTC | 1 cut(s) | 1330 |
| BsrI | ACTGG | 3 cut(s) | 758, 926, 1479 |
| BssECI | CCNNGG | 3 cut(s) | 337, 338, 1399 |
| BssMI | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| BssNI | GRCGYC | 1 cut(s) | 206 |
| Bst2UI | CCWGG | 3 cut(s) | 339, 350, 749 |
| Bst4CI | ACNGT | 2 cut(s) | 481, 1118 |
| Bst6I | CTCTTC | 2 cut(s) | 275, 327 |
| BstACI | GRCGYC | 1 cut(s) | 206 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1271 |
| BstC8I | GCNNGC | 3 cut(s) | 252, 1358, 1680 |
| BstDEI | CTNAG | 6 cut(s) | 182, 234, 462, 695, 804, 1509 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 353 |
| BstF5I | GGATG | 5 cut(s) | 1035, 1164, 1332, 1406, 1609 |
| BstH2I | RGCGCY | 1 cut(s) | 209 |
| BstHHI | GCGC | 1 cut(s) | 208 |
| BstKTI | GATC | 4 cut(s) | 563, 613, 820, 1258 |
| BstMAI | GTCTC | 1 cut(s) | 1282 |
| BstMBI | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| BstNI | CCWGG | 3 cut(s) | 339, 350, 749 |
| BstNSI | RCATGY | 2 cut(s) | 1207, 1636 |
| BstSCI | CCNGG | 4 cut(s) | 337, 348, 747, 1399 |
| BstSFI | CTRYAG | 1 cut(s) | 912 |
| BstSLI | GKGCMC | 1 cut(s) | 1125 |
| BstV1I | GCAGC | 8 cut(s) | 4, 226, 241, 452, 484, 674, 826, 845 |
| BstV2I | GAAGAC | 1 cut(s) | 750 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 525, 852 |
| BsuRI | GGCC | 5 cut(s) | 160, 299, 308, 623, 1321 |
| BtgZI | GCGATG | 1 cut(s) | 104 |
| BtsCI | GGATG | 5 cut(s) | 1035, 1164, 1332, 1406, 1609 |
| BtsI | GCAGTG | 1 cut(s) | 1183 |
| BtsIMutI | CAGTG | 2 cut(s) | 1123, 1183 |
| Cac8I | GCNNGC | 3 cut(s) | 252, 1358, 1680 |
| CfoI | GCGC | 1 cut(s) | 208 |
| Cfr13I | GGNCC | 6 cut(s) | 297, 307, 346, 644, 1102, 1319 |
| Csp6I | GTAC | 3 cut(s) | 482, 1006, 1499 |
| CviAII | CATG | 7 cut(s) | 525, 541, 584, 862, 1009, 1204, 1633 |
| CviQI | GTAC | 3 cut(s) | 482, 1006, 1499 |
| DdeI | CTNAG | 6 cut(s) | 182, 234, 462, 695, 804, 1509 |
| DinI | GGCGCC | 1 cut(s) | 207 |
| DpnI | GATC | 4 cut(s) | 562, 612, 819, 1257 |
| DpnII | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| DraI | TTTAAA | 2 cut(s) | 760, 1131 |
| Eam1104I | CTCTTC | 2 cut(s) | 275, 327 |
| EarI | CTCTTC | 2 cut(s) | 275, 327 |
| EciI | GGCGGA | 2 cut(s) | 306, 1422 |
| Ecl136II | GAGCTC | 1 cut(s) | 1453 |
| Eco147I | AGGCCT | 1 cut(s) | 160 |
| Eco24I | GRGCYC | 1 cut(s) | 1455 |
| Eco47I | GGWCC | 3 cut(s) | 346, 644, 1102 |
| Eco53kI | GAGCTC | 1 cut(s) | 1453 |
| Eco57I | CTGAAG | 1 cut(s) | 1682 |
| Eco88I | CYCGRG | 1 cut(s) | 1368 |
| EcoICRI | GAGCTC | 1 cut(s) | 1453 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 353 |
| EcoRI | GAATTC | 1 cut(s) | 1669 |
| EcoRII | CCWGG | 3 cut(s) | 337, 348, 747 |
| EcoT22I | ATGCAT | 1 cut(s) | 1626 |
| EcoT38I | GRGCYC | 1 cut(s) | 1455 |
| EgeI | GGCGCC | 1 cut(s) | 207 |
| EheI | GGCGCC | 1 cut(s) | 207 |
| FaeI | CATG | 7 cut(s) | 528, 544, 587, 865, 1012, 1207, 1636 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 557, 589 |
| FaqI | GGGAC | 2 cut(s) | 565, 1382 |
| FatI | CATG | 7 cut(s) | 524, 540, 583, 861, 1008, 1203, 1632 |
| FauNDI | CATATG | 1 cut(s) | 469 |
| FokI | GGATG | 5 cut(s) | 1022, 1171, 1319, 1393, 1616 |
| FriOI | GRGCYC | 1 cut(s) | 1455 |
| FspBI | CTAG | 4 cut(s) | 978, 1242, 1584, 1617 |
| GlaI | GCGC | 1 cut(s) | 207 |
| GsaI | CCCAGC | 1 cut(s) | 856 |
| GsuI | CTGGAG | 1 cut(s) | 371 |
| HaeII | RGCGCY | 1 cut(s) | 209 |
| HaeIII | GGCC | 5 cut(s) | 160, 299, 308, 623, 1321 |
| HapII | CCGG | 3 cut(s) | 203, 209, 1401 |
| HhaI | GCGC | 1 cut(s) | 208 |
| Hin1I | GRCGYC | 1 cut(s) | 206 |
| Hin1II | CATG | 7 cut(s) | 528, 544, 587, 865, 1012, 1207, 1636 |
| Hin6I | GCGC | 1 cut(s) | 206 |
| HinP1I | GCGC | 1 cut(s) | 206 |
| HinfI | GANTC | 5 cut(s) | 450, 686, 971, 1550, 1645 |
| HpaII | CCGG | 3 cut(s) | 203, 209, 1401 |
| HphI | GGTGA | 3 cut(s) | 88, 398, 877 |
| Hpy166II | GTNNAC | 2 cut(s) | 571, 1123 |
| Hpy188I | TCNGA | 9 cut(s) | 237, 421, 610, 805, 893, 1106, 1512, 1549, 1564 |
| Hpy188III | TCNNGA | 5 cut(s) | 454, 593, 821, 1236, 1421 |
| Hpy8I | GTNNAC | 2 cut(s) | 571, 1123 |
| HpyAV | CCTTC | 2 cut(s) | 531, 657 |
| HpyCH4III | ACNGT | 2 cut(s) | 481, 1118 |
| HpyF3I | CTNAG | 6 cut(s) | 182, 234, 462, 695, 804, 1509 |
| Hsp92I | GRCGYC | 1 cut(s) | 206 |
| Hsp92II | CATG | 7 cut(s) | 528, 544, 587, 865, 1012, 1207, 1636 |
| HspAI | GCGC | 1 cut(s) | 206 |
| KasI | GGCGCC | 1 cut(s) | 205 |
| Kzo9I | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| Lsp1109I | GCAGC | 8 cut(s) | 4, 226, 241, 452, 484, 674, 826, 845 |
| LweI | GCATC | 4 cut(s) | 609, 1025, 1054, 1415 |
| MaeI | CTAG | 4 cut(s) | 978, 1242, 1584, 1617 |
| MaeIII | GTNAC | 1 cut(s) | 770 |
| MalI | GATC | 4 cut(s) | 562, 612, 819, 1257 |
| MbiI | CCGCTC | 1 cut(s) | 1330 |
| MboI | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| MboII | GAAGA | 6 cut(s) | 97, 262, 314, 434, 755, 1178 |
| MhlI | GDGCHC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| Mly113I | GGCGCC | 1 cut(s) | 206 |
| MlyI | GAGTC | 1 cut(s) | 459 |
| MmeI | TCCRAC | 5 cut(s) | 414, 622, 1126, 1129, 1542 |
| Mph1103I | ATGCAT | 1 cut(s) | 1626 |
| MroXI | GAANNNNTTC | 2 cut(s) | 729, 958 |
| MseI | TTAA | 7 cut(s) | 531, 708, 719, 759, 1130, 1383, 1610 |
| MslI | CAYNNNNRTG | 1 cut(s) | 523 |
| MspA1I | CMGCKG | 2 cut(s) | 150, 665 |
| MspI | CCGG | 3 cut(s) | 203, 209, 1401 |
| MspR9I | CCNGG | 4 cut(s) | 339, 350, 749, 1401 |
| Mva1269I | GAATGC | 1 cut(s) | 1624 |
| MvaI | CCWGG | 3 cut(s) | 339, 350, 749 |
| NarI | GGCGCC | 1 cut(s) | 206 |
| NciI | CCSGG | 1 cut(s) | 1401 |
| NdeI | CATATG | 1 cut(s) | 469 |
| NdeII | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| NlaIII | CATG | 7 cut(s) | 528, 544, 587, 865, 1012, 1207, 1636 |
| NlaIV | GGNNCC | 4 cut(s) | 39, 207, 909, 1539 |
| NmeAIII | GCCGAG | 1 cut(s) | 309 |
| NmuCI | GTSAC | 1 cut(s) | 770 |
| NsiI | ATGCAT | 1 cut(s) | 1626 |
| NspI | RCATGY | 2 cut(s) | 1207, 1636 |
| PaeR7I | CTCGAG | 1 cut(s) | 1368 |
| PasI | CCCWGGG | 1 cut(s) | 338 |
| PceI | AGGCCT | 1 cut(s) | 160 |
| PciI | ACATGT | 1 cut(s) | 1632 |
| PctI | GAATGC | 1 cut(s) | 1624 |
| PdmI | GAANNNNTTC | 2 cut(s) | 729, 958 |
| PfeI | GAWTC | 4 cut(s) | 686, 971, 1550, 1645 |
| PfoI | TCCNGGA | 1 cut(s) | 348 |
| PleI | GAGTC | 1 cut(s) | 458 |
| PluTI | GGCGCC | 1 cut(s) | 209 |
| PpsI | GAGTC | 1 cut(s) | 458 |
| PscI | ACATGT | 1 cut(s) | 1632 |
| Psp124BI | GAGCTC | 1 cut(s) | 1455 |
| Psp6I | CCWGG | 3 cut(s) | 337, 348, 747 |
| PspFI | CCCAGC | 1 cut(s) | 852 |
| PspGI | CCWGG | 3 cut(s) | 337, 348, 747 |
| PspN4I | GGNNCC | 4 cut(s) | 39, 207, 909, 1539 |
| PspPI | GGNCC | 6 cut(s) | 297, 307, 346, 644, 1102, 1319 |
| PspXI | VCTCGAGB | 1 cut(s) | 1368 |
| PvuII | CAGCTG | 1 cut(s) | 665 |
| RsaI | GTAC | 3 cut(s) | 483, 1007, 1500 |
| RsaNI | GTAC | 3 cut(s) | 482, 1006, 1499 |
| RseI | CAYNNNNRTG | 1 cut(s) | 523 |
| SacI | GAGCTC | 1 cut(s) | 1455 |
| SaqAI | TTAA | 7 cut(s) | 531, 708, 719, 759, 1130, 1383, 1610 |
| Sau3AI | GATC | 4 cut(s) | 560, 610, 817, 1255 |
| Sau96I | GGNCC | 6 cut(s) | 297, 307, 346, 644, 1102, 1319 |
| SchI | GAGTC | 1 cut(s) | 459 |
| ScrFI | CCNGG | 4 cut(s) | 339, 350, 749, 1401 |
| SduI | GDGCHC | 5 cut(s) | 363, 1125, 1375, 1432, 1455 |
| SfaNI | GCATC | 4 cut(s) | 609, 1025, 1054, 1415 |
| SfcI | CTRYAG | 1 cut(s) | 912 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 305 |
| SfoI | GGCGCC | 1 cut(s) | 207 |
| Sfr274I | CTCGAG | 1 cut(s) | 1368 |
| SinI | GGWCC | 3 cut(s) | 346, 644, 1102 |
| SlaI | CTCGAG | 1 cut(s) | 1368 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 523 |
| SmlI | CTYRAG | 4 cut(s) | 369, 549, 593, 1368 |
| SmoI | CTYRAG | 4 cut(s) | 369, 549, 593, 1368 |
| SseBI | AGGCCT | 1 cut(s) | 160 |
| SsiI | CCGC | 8 cut(s) | 148, 264, 300, 317, 344, 793, 1328, 1433 |
| SspDI | GGCGCC | 1 cut(s) | 205 |
| SspMI | CTAG | 4 cut(s) | 978, 1242, 1584, 1617 |
| SstI | GAGCTC | 1 cut(s) | 1455 |
| StuI | AGGCCT | 1 cut(s) | 160 |
| StyD4I | CCNGG | 4 cut(s) | 337, 348, 747, 1399 |
| TaaI | ACNGT | 2 cut(s) | 481, 1118 |
| TaqI | TCGA | 2 cut(s) | 1297, 1369 |
| TatI | WGTACW | 1 cut(s) | 1005 |
| TauI | GCSGC | 2 cut(s) | 266, 302 |
| TfiI | GAWTC | 4 cut(s) | 686, 971, 1550, 1645 |
| Tru1I | TTAA | 7 cut(s) | 531, 708, 719, 759, 1130, 1383, 1610 |
| Tru9I | TTAA | 7 cut(s) | 531, 708, 719, 759, 1130, 1383, 1610 |
| TscAI | CASTG | 2 cut(s) | 1123, 1183 |
| TseFI | GTSAC | 1 cut(s) | 770 |
| Tsp45I | GTSAC | 1 cut(s) | 770 |
| TspDTI | ATGAA | 3 cut(s) | 513, 529, 639 |
| TspRI | CASTG | 2 cut(s) | 1123, 1183 |
| VneI | GTGCAC | 1 cut(s) | 1121 |
| VpaK11BI | GGWCC | 3 cut(s) | 346, 644, 1102 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 353 |
| XapI | RAATTY | 4 cut(s) | 887, 1529, 1650, 1669 |
| XceI | RCATGY | 2 cut(s) | 1207, 1636 |
| XhoI | CTCGAG | 1 cut(s) | 1368 |
| XmnI | GAANNNNTTC | 2 cut(s) | 729, 958 |
| XspI | CTAG | 4 cut(s) | 978, 1242, 1584, 1617 |
| Zsp2I | ATGCAT | 1 cut(s) | 1626 |