Rh1AG116000

Bacterial extracellular solute-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0011078
Physical Location & Seq
Forward (+)
19943363 .. 19947624
4262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG116000.1

Sequence Viewer

Length: 1623 bp
ATGGCTACTGCTGCTGCTGCTCCATTGCTGCCGTCACGCATCTGGTTCCACTTGGATCCCTCATGTTCCCAATTCCAAAGCCCTAACCTTAATCCCTCCTTCCCTCTCCGCCGTCGCTCTAACCATACTCATAGCCTCACTCTCACACTCGTCTCTTCTGCCCACACCCTCACTCCGCCGGAGCCGCCGCCGCCTACTTCCACCACCGTCCCTCACACCTTGCTTCGGTTCGCCGCCTCCGCCGCCCTCCTTCTCGGGATTGGGCTCGGATGCTGCGTCGCCTCCGCCCGCTCTTCTCCTCTAGCCCAGCCTCTGCCGGCGCTACAGGATCAAGCTACGGATGATGACAATGTAGAAGCGGCGTTTGGAACTTGGAAGTCCAAGACATTCGCTTTGACTGTGCCCTTGACAGTTGCAGCTCTACGCGGCTCTGTACCTCCTTCATGGATTAGGGATTTTATGCAGTCTCAAGGAAAAAGATCAAAGCTTCAACTCAAGTCTCATGCAAGTCTCGAGAGCGTGTTTTCGGATCTCTCAAGAGACTTCAGCAAAGGCCATGTTCGGCCTTCTTCTGTTGCGGCTGCTGATGTAGTTAGTATTGGGGACTCTTGGCTCAGTCATGCCATTAACAAGGGTCTAATTGAGCCACTTCAAGGGGTAGAAGACCAGGATTGGTATAAAGGATTGAGTGACAGATGGAAAGTATATCTACGCAGGAACTCTGAGGGGAGAATTGACCCTGATGGTAAAATATGGGCTGCTCCATATCGGTGGGGCTGCATGGTGATAGCATACAAAAAAACTAAATTTAGAAAGCATAACTTGGCTCCTATATCGGACTGGGCAGATTTATGGCGACCTGAACTTGCAGGAAGGATTTCAATGGTTGATTCTTCTAGAGAGGTTATCGGTGCAGTTCTGAAGCATATGGGAACCTCCTACAACACACAAGATATCCATTTGCAAGTTGATGGTGGGAAAGATGCTGTAAGGCAAAATCTGGCTTTACTTGGAAAACAGGTCCGACTATTTGACAGTGTACACTATTTGAAAGCATTTGCGGTTGGAGATGTGTGGGTGGCTGTCGGGTGGAGCAGTGATGTTCTTCCTGTTGCCAAACGCATGTCTGATGTTGCAGTAATTGTTCCGAAATCTGGAACTAGTATATGGGCAGATATGTGGGCAACCCCTGCTGTCTCTCGACTTGAAACAAATCGAATTGGGGGGCGAGTTAGAGGGCCATCTCCACTCATCCATCAGTGGATAGACTTCTGCTTGCAAACTGCTAGAGCACTCCCTTTTAAGCAGGAGGTAATCCCAGGCGCCTCCCCCTCTGCACTTGATAGTGCCCCGGCTGAAAATTTAGAAGAGTTCACCAAGGGTAAGCCAAGACTGGATACAAACCTCATTGTGGGAGTACCGCCACCTGAGATTTTGGCAAGGTGTGAGTTTTTGGAGCCATTATCTGACTCCACACTATCAGATTATCAATCGCTAATAGATAGTATGCAGAAATCTAAACATGGTTTGGTCCCTAGTATAAATTACAATATCTTATCATTGATTCAAAATTTGTGGTTGAAGCTGCATTCAAATAATAACAAGAGCTTGAAGCAAGTTTAG

Protein Analysis

540

Amino Acids

59.31

Weight (kDa)

9.23

Isoelectric Point (pI)

53.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP_bac_8 PF13416 194 - 400 2.9e-17 Bacterial extracellular solute-binding protein
SBP_bac_11 PF13531 194 - 370 3.8e-06 Bacterial extracellular solute-binding protein
SBP_bac_6 PF13343 195 - 453 3.3e-23 Bacterial extracellular solute-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31410
fragaria_vesca FvH4_3g41920 FvH4_3g41920 FvH4_3g41920
malus_domestica MD07G1026800.v1.1
prunus_persica Prupe.2G060600_v2.0.a1 Prupe.2G060600_v2.0.a1
pyrus_communis pycom07g02020 pycom07g02060
rosa_chinensis RchiOBHm_Chr1g0331171
rosa_laevigata RLG00000029748
rosa_multiflora Rmu_sc0005711.1_g000003
rosa_roxburghii Rroxscaffold_4G00319290
rosa_rugosa Rorug01G0091900 Rorug01G0092000
rosa_samantha Rh1AG116000 Rh1BG087700 Rh1CG111500 Rh1DG120400
rosa_wichuraiana Rw1G009320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1322
AccBSI CCGCTC 1 cut(s) 291
AccII CGCG 1 cut(s) 426
AclWI GGATC 4 cut(s) 50, 63, 336, 537
AcsI RAATTY 3 cut(s) 806, 1360, 1570
AcuI CTGAAG 2 cut(s) 529, 941
AcyI GRCGYC 1 cut(s) 1323
AfaI GTAC 3 cut(s) 435, 1041, 1419
AfiI CCNNNNNNNGG 4 cut(s) 225, 653, 1154, 1411
AgsI TTSAA 9 cut(s) 491, 653, 882, 1051, 1208, 1568, 1582, 1593, 1612
AhlI ACTAGT 1 cut(s) 1160
AjnI CCWGG 2 cut(s) 666, 1318
AjuI GAANNNNNNNTTGG 2 cut(s) 348, 380
AluBI AGCT 5 cut(s) 335, 419, 487, 1585, 1608
AluI AGCT 5 cut(s) 335, 419, 487, 1585, 1608
Alw21I GWGCWC 1 cut(s) 1294
Alw26I GTCTC 6 cut(s) 157, 471, 504, 515, 534, 1201
AlwI GGATC 4 cut(s) 50, 63, 336, 537
AlwNI CAGNNNCTG 1 cut(s) 313
Ama87I CYCGRG 2 cut(s) 254, 512
AoxI GGCC 3 cut(s) 553, 563, 1238
ApoI RAATTY 3 cut(s) 806, 1360, 1570
ArsI GACNNNNNNTTYG 2 cut(s) 376, 408
Asp700I GAANNNNTTC 1 cut(s) 877
AspLEI GCGC 2 cut(s) 322, 1325
AspS9I GGNCC 3 cut(s) 1021, 1238, 1531
AsuC2I CCSGG 1 cut(s) 1352
AsuHPI GGTGA 2 cut(s) 796, 1366
AvaI CYCGRG 2 cut(s) 254, 512
AvaII GGWCC 2 cut(s) 1021, 1531
BaeGI GKGCMC 2 cut(s) 405, 1351
BamHI GGATCC 1 cut(s) 55
BanI GGYRCC 1 cut(s) 1322
BanII GRGCYC 1 cut(s) 267
BbsI GAAGAC 1 cut(s) 669
Bbv12I GWGCWC 1 cut(s) 1294
BbvI GCAGC 8 cut(s) 4, 15, 260, 428, 568, 745, 764, 1572
BccI CCATC 5 cut(s) 690, 737, 965, 1249, 1263
BceAI ACGGC 2 cut(s) 16, 96
BciT130I CCWGG 2 cut(s) 668, 1320
BciVI GTATCC 1 cut(s) 1390
BcnI CCSGG 1 cut(s) 1352
BcoDI GTCTC 6 cut(s) 157, 471, 504, 515, 534, 1201
BcuI ACTAGT 1 cut(s) 1160
BfaI CTAG 5 cut(s) 302, 897, 1161, 1287, 1536
BfmI CTRYAG 1 cut(s) 323
BfoI RGCGCY 2 cut(s) 323, 1326
BfuI GTATCC 1 cut(s) 1390
Bme1390I CCNGG 3 cut(s) 668, 1320, 1352
Bme18I GGWCC 2 cut(s) 1021, 1531
BmeT110I CYCGRG 2 cut(s) 254, 512
BmgT120I GGNCC 3 cut(s) 1021, 1238, 1531
BmiI GGNNCC 8 cut(s) 47, 57, 183, 828, 934, 1324, 1458, 1533
BmrFI CCNGG 3 cut(s) 668, 1320, 1352
BmrI ACTGGG 1 cut(s) 850
BmsI GCATC 3 cut(s) 48, 260, 973
BmuI ACTGGG 1 cut(s) 850
BpiI GAAGAC 1 cut(s) 669
BpuEI CTTGAG 3 cut(s) 453, 479, 520
BpuMI CCSGG 1 cut(s) 1352
BsaHI GRCGYC 1 cut(s) 1323
BsaJI CCNNGG 3 cut(s) 1318, 1350, 1377
BsaXI ACNNNNNCTCC 2 cut(s) 157, 187
Bsc4I CCNNNNNNNGG 4 cut(s) 225, 653, 1154, 1411
Bse118I RCCGGY 1 cut(s) 316
Bse1I ACTGG 2 cut(s) 845, 1398
Bse3DI GCAATG 1 cut(s) 23
BseBI CCWGG 2 cut(s) 668, 1320
BseDI CCNNGG 3 cut(s) 1318, 1350, 1377
BseGI GGATG 3 cut(s) 275, 346, 1251
BseLI CCNNNNNNNGG 4 cut(s) 225, 653, 1154, 1411
BseMI GCAATG 1 cut(s) 23
BseMII CTCAG 3 cut(s) 628, 714, 1419
BseNI ACTGG 2 cut(s) 845, 1398
BseRI GAGGAG 1 cut(s) 288
BseSI GKGCMC 2 cut(s) 405, 1351
BseXI GCAGC 8 cut(s) 4, 15, 260, 428, 568, 745, 764, 1572
BseYI CCCAGC 1 cut(s) 306
BsgI GTGCAG 2 cut(s) 933, 1320
Bsh1236I CGCG 1 cut(s) 426
BshFI GGCC 3 cut(s) 555, 565, 1240
BshNI GGYRCC 1 cut(s) 1322
BsiHKAI GWGCWC 1 cut(s) 1294
BsiHKCI CYCGRG 2 cut(s) 254, 512
BsiSI CCGG 3 cut(s) 179, 317, 1352
BslFI GGGAC 3 cut(s) 194, 617, 1517
BslI CCNNNNNNNGG 4 cut(s) 225, 653, 1154, 1411
BsmAI GTCTC 6 cut(s) 157, 471, 504, 515, 534, 1201
BsmBI CGTCTC 1 cut(s) 157
BsmFI GGGAC 3 cut(s) 194, 617, 1517
BsmI GAATGC 1 cut(s) 1588
BsnI GGCC 3 cut(s) 555, 565, 1240
BsoBI CYCGRG 2 cut(s) 254, 512
Bsp1286I GDGCHC 4 cut(s) 267, 405, 1294, 1351
Bsp1407I TGTACA 1 cut(s) 1039
Bsp143I GATC 4 cut(s) 55, 328, 479, 529
BspANI GGCC 3 cut(s) 555, 565, 1240
BspCNI CTCAG 3 cut(s) 627, 715, 1420
BspFNI CGCG 1 cut(s) 426
BspLI GGNNCC 8 cut(s) 47, 57, 183, 828, 934, 1324, 1458, 1533
BspPI GGATC 4 cut(s) 50, 63, 336, 537
BspQI GCTCTTC 1 cut(s) 298
BspT107I GGYRCC 1 cut(s) 1322
BsrBI CCGCTC 1 cut(s) 291
BsrDI GCAATG 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 316
BsrGI TGTACA 1 cut(s) 1039
BsrI ACTGG 2 cut(s) 845, 1398
BssAI RCCGGY 1 cut(s) 316
BssECI CCNNGG 3 cut(s) 1318, 1350, 1377
BssMI GATC 4 cut(s) 55, 328, 479, 529
BssNI GRCGYC 1 cut(s) 1323
BssT1I CCWWGG 1 cut(s) 1377
Bst2UI CCWGG 2 cut(s) 668, 1320
Bst4CI ACNGT 4 cut(s) 208, 400, 412, 1037
Bst6I CTCTTC 3 cut(s) 160, 298, 1362
BstACI GRCGYC 1 cut(s) 1323
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 1039
BstC8I GCNNGC 3 cut(s) 289, 318, 1277
BstDEI CTNAG 3 cut(s) 614, 723, 1428
BstF5I GGATG 3 cut(s) 275, 346, 1251
BstFNI CGCG 1 cut(s) 426
BstH2I RGCGCY 2 cut(s) 323, 1326
BstHHI GCGC 2 cut(s) 322, 1325
BstKTI GATC 4 cut(s) 58, 331, 482, 532
BstMAI GTCTC 6 cut(s) 157, 471, 504, 515, 534, 1201
BstMBI GATC 4 cut(s) 55, 328, 479, 529
BstMWI GCNNNNNNNGC 7 cut(s) 11, 17, 184, 190, 239, 242, 1190
BstNI CCWGG 2 cut(s) 668, 1320
BstNSI RCATGY 1 cut(s) 1126
BstSCI CCNGG 3 cut(s) 666, 1318, 1350
BstSFI CTRYAG 1 cut(s) 323
BstSLI GKGCMC 2 cut(s) 405, 1351
BstUI CGCG 1 cut(s) 426
BstV1I GCAGC 8 cut(s) 4, 15, 260, 428, 568, 745, 764, 1572
BstV2I GAAGAC 1 cut(s) 669
BstX2I RGATCY 2 cut(s) 55, 529
BstXI CCANNNNNNTGG 1 cut(s) 771
BstYI RGATCY 2 cut(s) 55, 529
BsuI GTATCC 1 cut(s) 1390
BsuRI GGCC 3 cut(s) 555, 565, 1240
BtsCI GGATG 3 cut(s) 275, 346, 1251
BtsI GCAGTG 1 cut(s) 1102
BtsIMutI CAGTG 3 cut(s) 1042, 1102, 1265
Cac8I GCNNGC 3 cut(s) 289, 318, 1277
CaiI CAGNNNCTG 1 cut(s) 313
CfoI GCGC 2 cut(s) 322, 1325
Cfr10I RCCGGY 1 cut(s) 316
Cfr13I GGNCC 3 cut(s) 1021, 1238, 1531
CseI GACGC 1 cut(s) 265
Csp6I GTAC 3 cut(s) 434, 1040, 1418
CspCI CAANNNNNGTGG 2 cut(s) 1556, 1591
CviAII CATG 8 cut(s) 63, 444, 503, 557, 620, 781, 1123, 1523
CviQI GTAC 3 cut(s) 434, 1040, 1418
DdeI CTNAG 3 cut(s) 614, 723, 1428
DinI GGCGCC 1 cut(s) 1324
DpnI GATC 4 cut(s) 57, 330, 481, 531
DpnII GATC 4 cut(s) 55, 328, 479, 529
Eam1104I CTCTTC 3 cut(s) 160, 298, 1362
EarI CTCTTC 3 cut(s) 160, 298, 1362
EciI GGCGGA 4 cut(s) 98, 165, 229, 274
Eco130I CCWWGG 1 cut(s) 1377
Eco24I GRGCYC 1 cut(s) 267
Eco32I GATATC 1 cut(s) 955
Eco47I GGWCC 2 cut(s) 1021, 1531
Eco57I CTGAAG 2 cut(s) 529, 941
Eco88I CYCGRG 2 cut(s) 254, 512
EcoRII CCWGG 2 cut(s) 666, 1318
EcoRV GATATC 1 cut(s) 955
EcoT14I CCWWGG 1 cut(s) 1377
EcoT38I GRGCYC 1 cut(s) 267
EgeI GGCGCC 1 cut(s) 1324
EheI GGCGCC 1 cut(s) 1324
ErhI CCWWGG 1 cut(s) 1377
Esp3I CGTCTC 1 cut(s) 157
FaeI CATG 8 cut(s) 66, 447, 506, 560, 623, 784, 1126, 1526
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 3 cut(s) 194, 617, 1517
FatI CATG 8 cut(s) 62, 443, 502, 556, 619, 780, 1122, 1522
FauI CCCGC 1 cut(s) 296
FauNDI CATATG 1 cut(s) 927
FokI GGATG 3 cut(s) 282, 353, 1238
FriOI GRGCYC 1 cut(s) 267
FspBI CTAG 5 cut(s) 302, 897, 1161, 1287, 1536
GlaI GCGC 2 cut(s) 321, 1324
GsaI CCCAGC 1 cut(s) 310
HaeII RGCGCY 2 cut(s) 323, 1326
HaeIII GGCC 3 cut(s) 555, 565, 1240
HapII CCGG 3 cut(s) 179, 317, 1352
HgaI GACGC 1 cut(s) 265
HhaI GCGC 2 cut(s) 322, 1325
Hin1I GRCGYC 1 cut(s) 1323
Hin1II CATG 8 cut(s) 66, 447, 506, 560, 623, 784, 1126, 1526
Hin6I GCGC 2 cut(s) 320, 1323
HinP1I GCGC 2 cut(s) 320, 1323
HindIII AAGCTT 1 cut(s) 485
HinfI GANTC 4 cut(s) 605, 890, 1469, 1564
HpaII CCGG 3 cut(s) 179, 317, 1352
HphI GGTGA 2 cut(s) 796, 1366
Hpy166II GTNNAC 3 cut(s) 1040, 1042, 1374
Hpy188III TCNNGA 7 cut(s) 256, 512, 514, 537, 897, 1155, 1200
Hpy8I GTNNAC 3 cut(s) 1040, 1042, 1374
Hpy99I CGWCG 2 cut(s) 117, 281
HpyAV CCTTC 5 cut(s) 109, 260, 450, 576, 867
HpyCH4III ACNGT 4 cut(s) 208, 400, 412, 1037
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 17, 184, 190, 239, 242, 1190
HpyF3I CTNAG 3 cut(s) 614, 723, 1428
Hsp92I GRCGYC 1 cut(s) 1323
Hsp92II CATG 8 cut(s) 66, 447, 506, 560, 623, 784, 1126, 1526
HspAI GCGC 2 cut(s) 320, 1323
KasI GGCGCC 1 cut(s) 1322
KroI GCCGGC 1 cut(s) 316
KroNI GCCGGC 1 cut(s) 318
Kzo9I GATC 4 cut(s) 55, 328, 479, 529
LguI GCTCTTC 1 cut(s) 298
LmnI GCTCC 6 cut(s) 25, 181, 766, 832, 1092, 1456
Lsp1109I GCAGC 8 cut(s) 4, 15, 260, 428, 568, 745, 764, 1572
LweI GCATC 3 cut(s) 48, 260, 973
MaeI CTAG 5 cut(s) 302, 897, 1161, 1287, 1536
MaeIII GTNAC 2 cut(s) 33, 689
MalI GATC 4 cut(s) 57, 330, 481, 531
MbiI CCGCTC 1 cut(s) 291
MboI GATC 4 cut(s) 55, 328, 479, 529
MboII GAAGA 7 cut(s) 147, 285, 561, 674, 885, 1097, 1379
MflI RGATCY 2 cut(s) 55, 529
MhlI GDGCHC 4 cut(s) 267, 405, 1294, 1351
MluCI AATT 9 cut(s) 71, 639, 732, 806, 1140, 1218, 1360, 1543, 1570
Mly113I GGCGCC 1 cut(s) 1323
MlyI GAGTC 2 cut(s) 599, 1463
MmeI TCCRAC 2 cut(s) 1045, 1048
MroNI GCCGGC 1 cut(s) 316
MroXI GAANNNNTTC 1 cut(s) 877
MseI TTAA 3 cut(s) 90, 627, 1302
MslI CAYNNNNRTG 1 cut(s) 769
MspI CCGG 3 cut(s) 179, 317, 1352
MspR9I CCNGG 3 cut(s) 668, 1320, 1352
Mva1269I GAATGC 1 cut(s) 1588
MvaI CCWGG 2 cut(s) 668, 1320
MvnI CGCG 1 cut(s) 426
MwoI GCNNNNNNNGC 7 cut(s) 11, 17, 184, 190, 239, 242, 1190
NaeI GCCGGC 1 cut(s) 318
NarI GGCGCC 1 cut(s) 1323
NciI CCSGG 1 cut(s) 1352
NdeI CATATG 1 cut(s) 927
NdeII GATC 4 cut(s) 55, 328, 479, 529
NgoMIV GCCGGC 1 cut(s) 316
NlaIII CATG 8 cut(s) 66, 447, 506, 560, 623, 784, 1126, 1526
NlaIV GGNNCC 8 cut(s) 47, 57, 183, 828, 934, 1324, 1458, 1533
NmuCI GTSAC 2 cut(s) 33, 689
NspI RCATGY 1 cut(s) 1126
PaeR7I CTCGAG 1 cut(s) 512
PciSI GCTCTTC 1 cut(s) 298
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PctI GAATGC 1 cut(s) 1588
PdiI GCCGGC 1 cut(s) 318
PdmI GAANNNNTTC 1 cut(s) 877
PfeI GAWTC 2 cut(s) 890, 1564
PleI GAGTC 2 cut(s) 599, 1463
PluTI GGCGCC 1 cut(s) 1326
PpsI GAGTC 2 cut(s) 599, 1463
Psp6I CCWGG 2 cut(s) 666, 1318
PspFI CCCAGC 1 cut(s) 306
PspGI CCWGG 2 cut(s) 666, 1318
PspN4I GGNNCC 8 cut(s) 47, 57, 183, 828, 934, 1324, 1458, 1533
PspPI GGNCC 3 cut(s) 1021, 1238, 1531
PstNI CAGNNNCTG 1 cut(s) 313
PsuI RGATCY 2 cut(s) 55, 529
RsaI GTAC 3 cut(s) 435, 1041, 1419
RsaNI GTAC 3 cut(s) 434, 1040, 1418
RseI CAYNNNNRTG 1 cut(s) 769
SapI GCTCTTC 1 cut(s) 298
SaqAI TTAA 3 cut(s) 90, 627, 1302
Sau3AI GATC 4 cut(s) 55, 328, 479, 529
Sau96I GGNCC 3 cut(s) 1021, 1238, 1531
SchI GAGTC 2 cut(s) 599, 1463
ScrFI CCNGG 3 cut(s) 668, 1320, 1352
SduI GDGCHC 4 cut(s) 267, 405, 1294, 1351
SfaNI GCATC 3 cut(s) 48, 260, 973
SfcI CTRYAG 1 cut(s) 323
SfoI GGCGCC 1 cut(s) 1324
Sfr274I CTCGAG 1 cut(s) 512
SinI GGWCC 2 cut(s) 1021, 1531
SlaI CTCGAG 1 cut(s) 512
SmiMI CAYNNNNRTG 1 cut(s) 769
SmlI CTYRAG 4 cut(s) 468, 494, 512, 535
SmoI CTYRAG 4 cut(s) 468, 494, 512, 535
SpeI ACTAGT 1 cut(s) 1160
Sse9I AATT 9 cut(s) 71, 639, 732, 806, 1140, 1218, 1360, 1543, 1570
SspDI GGCGCC 1 cut(s) 1322
SspMI CTAG 5 cut(s) 302, 897, 1161, 1287, 1536
StyD4I CCNGG 3 cut(s) 666, 1318, 1350
StyI CCWWGG 1 cut(s) 1377
TaaI ACNGT 4 cut(s) 208, 400, 412, 1037
TaqI TCGA 3 cut(s) 513, 1201, 1216
TasI AATT 9 cut(s) 71, 639, 732, 806, 1140, 1218, 1360, 1543, 1570
TatI WGTACW 1 cut(s) 1039
TauI GCSGC 8 cut(s) 187, 190, 193, 236, 245, 362, 429, 581
TfiI GAWTC 2 cut(s) 890, 1564
Tru1I TTAA 3 cut(s) 90, 627, 1302
Tru9I TTAA 3 cut(s) 90, 627, 1302
TscAI CASTG 3 cut(s) 1042, 1102, 1265
TseFI GTSAC 2 cut(s) 33, 689
Tsp45I GTSAC 2 cut(s) 33, 689
TspDTI ATGAA 1 cut(s) 432
TspGWI ACGGA 1 cut(s) 353
TspRI CASTG 3 cut(s) 1042, 1102, 1265
VpaK11BI GGWCC 2 cut(s) 1021, 1531
XapI RAATTY 3 cut(s) 806, 1360, 1570
XbaI TCTAGA 1 cut(s) 896
XceI RCATGY 1 cut(s) 1126
XhoI CTCGAG 1 cut(s) 512
XmnI GAANNNNTTC 1 cut(s) 877
XspI CTAG 5 cut(s) 302, 897, 1161, 1287, 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.