RLG00000029748

Bacterial extracellular solute-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0011078
Physical Location & Seq
Reverse (-)
48420598 .. 48425133
4536 bp
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UTR
Exon/CDS
Intron
RLM00000029748

Sequence Viewer

Length: 1533 bp
ATGGCTACTGCTCCATTGCTGCCGTCACGCGTCTGTTTCCCTTTGGATCCCTCATGTTCCCAATTCCAAAGCCCATACCTTAATCCCTCCTTCCCTCTCCGCCGTCGCTCTAAGCATACTCATAGCCTCACTCTCACACTCGTCTCTTCTGCCCACACTCTCACTCCGCCGGAGCCGCCGCCGCCGCCGCAGCCTACTTCCACCGTCCCTCACACCTTGCTTCGGTTCGCCGCCTCTGCCGCCCTCCTTCTCGGGATTGGGCTCGGATGCTGCGTCGCCTCCGCCCGCTCTTCTCCTCTTCCTCCTCCTCTAGCCCAGCCTCCGCCGGCGCTACAGGATGAAGCTACGGATGATGACAATTTAGAAGCGGCATTTGGAACTTGGAAGTCCAAGACATTCGCTTTGACTGTGCCCTTGACAGTTGCTGCTCTACGTGGCTCTGTGCCTCCTTCATGGATTAAGGATTTTATGCAGTCTCAAGGAAAAAGATCAAAGCTTCAACTCAAGTCTCATGCAAGTCTTGAGAGCGTATTTTCGGATCTCTCAAGAGACTTCAGCAAAGGCGATGTTCGGCCTTCCTCTGTTGCGGCTGCTGATGTAGTTAGTATTGGGGACTCTTGGCTCAGTCATGCTATTAACAAGGGTCTAATTGAGCCAATTCAAGGGGTAGAAGACCAGGATTGGTATAAAGGATTGAGTGACAGATGGAAAGTATATCTACGCAGGAACTCTGAGGGGAGAATTGACCCTGATGGTAAAATATGGGCTGCTCCATATCGGTGGGGCTGCATGGTGATAGCATACAAAAAAACTAAATTTAGAAAGCATAACTTGGCTCCAATATCGGACTGGGCAGATTTATGGCGACCTGAACTTGCAGGAAGGATTTCAATGGTTGATTCTTCTAGAGAGGTTATCGGTGCAGTTCTGAAGCATATGGGAACCTCCTACAACACACAAGATATCCATTTGCAAGTTGATGGTGGGAAAGATGCTGTAAGGCAAAATCTGGCTTTACTTGGAAAACAGGTCCGACTATTTGACAGTGTACAATATTTGAAAGCATTTGCGGTTGGAGATGTGTGGGTGGCTGTCGGGTGGAGCAGCGATGTTCTTCCTGTTGCCAAACGCATGTCTGATGTTGCAGTAATTGTTCCGAAATCTGGAACTAGTATATGGGCAGATATGTGGGCAACCCCTGCTGTCTCTCGACTTGAAACAAATCGAATTGGGGGGCGAGTTAGAGGGCCATCTCCACTCATCCATCAGTGGATAGACTTCTGCTTGCAAACTGCTAGAGCACTCCCTTTTAAGCAGGAGGTAATTCCAGGCGCCTCCCCCTCTACACTTGATAGTGCCCCGGCTGAAAATTTAGAAGAGTTCACCAAGGGTAAGCCAAGACTGGACACAAACCTCATTGCGGGTGTACCACCACCTGAGATTTTGGCAAGAACACTCGAAGTGATCCTGGACTCGGAAGAACATCAAACTAGTACTTCTGTTAACAATCTTGTCGGTGATACATTAGAATAA

Protein Analysis

511

Amino Acids

55.68

Weight (kDa)

8.42

Isoelectric Point (pI)

54.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBP_bac_1 PF01547 180 - 397 1.4e-06 Bacterial extracellular solute-binding protein
SBP_bac_8 PF13416 196 - 403 1.4e-17 Bacterial extracellular solute-binding protein
SBP_bac_11 PF13531 197 - 373 3.9e-07 Bacterial extracellular solute-binding protein
SBP_bac_6 PF13343 198 - 455 2.2e-23 Bacterial extracellular solute-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31410
fragaria_vesca FvH4_3g41920 FvH4_3g41920 FvH4_3g41920
malus_domestica MD07G1026800.v1.1
prunus_persica Prupe.2G060600_v2.0.a1 Prupe.2G060600_v2.0.a1
pyrus_communis pycom07g02020 pycom07g02060
rosa_chinensis RchiOBHm_Chr1g0331171
rosa_laevigata RLG00000029748
rosa_multiflora Rmu_sc0005711.1_g000003
rosa_roxburghii Rroxscaffold_4G00319290
rosa_rugosa Rorug01G0091900 Rorug01G0092000
rosa_samantha Rh1AG116000 Rh1BG087700 Rh1CG111500 Rh1DG120400
rosa_wichuraiana Rw1G009320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1331
AccBSI CCGCTC 1 cut(s) 288
AccII CGCG 1 cut(s) 30
AclWI GGATC 4 cut(s) 41, 54, 546, 1459
AcsI RAATTY 2 cut(s) 815, 1369
AcuI CTGAAG 2 cut(s) 538, 950
AcyI GRCGYC 1 cut(s) 1332
AfaI GTAC 3 cut(s) 1050, 1428, 1495
AfiI CCNNNNNNNGG 5 cut(s) 222, 662, 1163, 1420, 1474
AflIII ACRYGT 1 cut(s) 28
AgsI TTSAA 5 cut(s) 500, 662, 891, 1060, 1217
AhlI ACTAGT 2 cut(s) 1169, 1490
AjnI CCWGG 3 cut(s) 675, 1327, 1467
AjuI GAANNNNNNNTTGG 2 cut(s) 357, 389
AluBI AGCT 2 cut(s) 344, 496
AluI AGCT 2 cut(s) 344, 496
Alw21I GWGCWC 1 cut(s) 1303
Alw26I GTCTC 5 cut(s) 148, 480, 513, 543, 1210
AlwI GGATC 4 cut(s) 41, 54, 546, 1459
AlwNI CAGNNNCTG 1 cut(s) 425
Ama87I CYCGRG 1 cut(s) 251
AoxI GGCC 2 cut(s) 572, 1247
ApeKI GCWGC 8 cut(s) 19, 190, 270, 425, 590, 767, 786, 1104
ApoI RAATTY 2 cut(s) 815, 1369
ArsI GACNNNNNNTTYG 2 cut(s) 385, 417
Asp700I GAANNNNTTC 1 cut(s) 886
AspLEI GCGC 2 cut(s) 331, 1334
AspS9I GGNCC 2 cut(s) 1030, 1247
AsuC2I CCSGG 1 cut(s) 1361
AsuHPI GGTGA 3 cut(s) 805, 1375, 1529
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 1 cut(s) 1030
BaeGI GKGCMC 2 cut(s) 414, 1360
BamHI GGATCC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 1331
BanII GRGCYC 1 cut(s) 264
BbsI GAAGAC 1 cut(s) 678
Bbv12I GWGCWC 1 cut(s) 1303
BbvI GCAGC 8 cut(s) 6, 202, 257, 412, 577, 754, 773, 1116
BccI CCATC 5 cut(s) 699, 746, 974, 1258, 1272
BceAI ACGGC 2 cut(s) 7, 87
BciT130I CCWGG 3 cut(s) 677, 1329, 1469
BcnI CCSGG 1 cut(s) 1361
BcoDI GTCTC 5 cut(s) 148, 480, 513, 543, 1210
BcuI ACTAGT 2 cut(s) 1169, 1490
BfaI CTAG 5 cut(s) 311, 906, 1170, 1296, 1491
BfmI CTRYAG 1 cut(s) 332
BfoI RGCGCY 2 cut(s) 332, 1335
BmcAI AGTACT 1 cut(s) 1495
Bme1390I CCNGG 4 cut(s) 677, 1329, 1361, 1469
Bme18I GGWCC 1 cut(s) 1030
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 1030, 1247
BmiI GGNNCC 5 cut(s) 48, 174, 837, 943, 1333
BmrFI CCNGG 4 cut(s) 677, 1329, 1361, 1469
BmrI ACTGGG 1 cut(s) 859
BmsI GCATC 2 cut(s) 257, 982
BmuI ACTGGG 1 cut(s) 859
BpiI GAAGAC 1 cut(s) 678
BpuEI CTTGAG 4 cut(s) 462, 488, 529, 542
BpuMI CCSGG 1 cut(s) 1361
BsaAI YACGTR 1 cut(s) 434
BsaHI GRCGYC 1 cut(s) 1332
BsaJI CCNNGG 2 cut(s) 1359, 1386
BsaXI ACNNNNNCTCC 2 cut(s) 148, 178
Bsc4I CCNNNNNNNGG 5 cut(s) 222, 662, 1163, 1420, 1474
Bse118I RCCGGY 1 cut(s) 325
Bse1I ACTGG 2 cut(s) 854, 1407
Bse3DI GCAATG 2 cut(s) 14, 1416
BseBI CCWGG 3 cut(s) 677, 1329, 1469
BseDI CCNNGG 2 cut(s) 1359, 1386
BseGI GGATG 4 cut(s) 272, 343, 355, 1260
BseLI CCNNNNNNNGG 5 cut(s) 222, 662, 1163, 1420, 1474
BseMI GCAATG 2 cut(s) 14, 1416
BseMII CTCAG 3 cut(s) 637, 723, 1428
BseNI ACTGG 2 cut(s) 854, 1407
BseRI GAGGAG 3 cut(s) 285, 294, 297
BseSI GKGCMC 2 cut(s) 414, 1360
BseXI GCAGC 8 cut(s) 6, 202, 257, 412, 577, 754, 773, 1116
BseYI CCCAGC 1 cut(s) 315
BsgI GTGCAG 1 cut(s) 942
Bsh1236I CGCG 1 cut(s) 30
BshFI GGCC 2 cut(s) 574, 1249
BshNI GGYRCC 1 cut(s) 1331
BsiHKAI GWGCWC 1 cut(s) 1303
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 3 cut(s) 170, 326, 1361
BslFI GGGAC 2 cut(s) 191, 626
BslI CCNNNNNNNGG 5 cut(s) 222, 662, 1163, 1420, 1474
BsmAI GTCTC 5 cut(s) 148, 480, 513, 543, 1210
BsmBI CGTCTC 1 cut(s) 148
BsmFI GGGAC 2 cut(s) 191, 626
BsnI GGCC 2 cut(s) 574, 1249
BsoBI CYCGRG 1 cut(s) 251
Bsp1286I GDGCHC 4 cut(s) 264, 414, 1303, 1360
Bsp1407I TGTACA 1 cut(s) 1048
Bsp143I GATC 4 cut(s) 46, 488, 538, 1464
BspANI GGCC 2 cut(s) 574, 1249
BspCNI CTCAG 3 cut(s) 636, 724, 1429
BspFNI CGCG 1 cut(s) 30
BspLI GGNNCC 5 cut(s) 48, 174, 837, 943, 1333
BspPI GGATC 4 cut(s) 41, 54, 546, 1459
BspQI GCTCTTC 1 cut(s) 295
BspT107I GGYRCC 1 cut(s) 1331
BsrBI CCGCTC 1 cut(s) 288
BsrDI GCAATG 2 cut(s) 14, 1416
BsrFI RCCGGY 1 cut(s) 325
BsrGI TGTACA 1 cut(s) 1048
BsrI ACTGG 2 cut(s) 854, 1407
BssAI RCCGGY 1 cut(s) 325
BssECI CCNNGG 2 cut(s) 1359, 1386
BssMI GATC 4 cut(s) 46, 488, 538, 1464
BssNI GRCGYC 1 cut(s) 1332
BssT1I CCWWGG 1 cut(s) 1386
Bst2UI CCWGG 3 cut(s) 677, 1329, 1469
Bst4CI ACNGT 4 cut(s) 205, 409, 421, 1046
Bst6I CTCTTC 4 cut(s) 151, 295, 303, 1371
BstACI GRCGYC 1 cut(s) 1332
BstAPI GCANNNNNTGC 1 cut(s) 1199
BstAUI TGTACA 1 cut(s) 1048
BstBAI YACGTR 1 cut(s) 434
BstC8I GCNNGC 3 cut(s) 286, 327, 1286
BstDEI CTNAG 4 cut(s) 111, 623, 732, 1437
BstF5I GGATG 4 cut(s) 272, 343, 355, 1260
BstFNI CGCG 1 cut(s) 30
BstH2I RGCGCY 2 cut(s) 332, 1335
BstHHI GCGC 2 cut(s) 331, 1334
BstKTI GATC 4 cut(s) 49, 491, 541, 1467
BstMAI GTCTC 5 cut(s) 148, 480, 513, 543, 1210
BstMBI GATC 4 cut(s) 46, 488, 538, 1464
BstMWI GCNNNNNNNGC 8 cut(s) 175, 181, 184, 187, 190, 236, 239, 1199
BstNI CCWGG 3 cut(s) 677, 1329, 1469
BstNSI RCATGY 1 cut(s) 1135
BstSCI CCNGG 4 cut(s) 675, 1327, 1359, 1467
BstSFI CTRYAG 1 cut(s) 332
BstSLI GKGCMC 2 cut(s) 414, 1360
BstUI CGCG 1 cut(s) 30
BstV1I GCAGC 8 cut(s) 6, 202, 257, 412, 577, 754, 773, 1116
BstV2I GAAGAC 1 cut(s) 678
BstX2I RGATCY 2 cut(s) 46, 538
BstXI CCANNNNNNTGG 1 cut(s) 780
BstYI RGATCY 2 cut(s) 46, 538
BsuRI GGCC 2 cut(s) 574, 1249
BtgZI GCGATG 2 cut(s) 579, 1122
BtsCI GGATG 4 cut(s) 272, 343, 355, 1260
BtsIMutI CAGTG 2 cut(s) 1051, 1274
Cac8I GCNNGC 3 cut(s) 286, 327, 1286
CaiI CAGNNNCTG 1 cut(s) 425
CfoI GCGC 2 cut(s) 331, 1334
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 2 cut(s) 1030, 1247
CseI GACGC 2 cut(s) 19, 262
Csp6I GTAC 3 cut(s) 1049, 1427, 1494
CviAII CATG 6 cut(s) 54, 453, 512, 629, 790, 1132
CviQI GTAC 3 cut(s) 1049, 1427, 1494
DdeI CTNAG 4 cut(s) 111, 623, 732, 1437
DinI GGCGCC 1 cut(s) 1333
DpnI GATC 4 cut(s) 48, 490, 540, 1466
DpnII GATC 4 cut(s) 46, 488, 538, 1464
Eam1104I CTCTTC 4 cut(s) 151, 295, 303, 1371
EarI CTCTTC 4 cut(s) 151, 295, 303, 1371
EciI GGCGGA 4 cut(s) 89, 156, 271, 312
Eco130I CCWWGG 1 cut(s) 1386
Eco24I GRGCYC 1 cut(s) 264
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 1 cut(s) 1030
Eco57I CTGAAG 2 cut(s) 538, 950
Eco88I CYCGRG 1 cut(s) 251
EcoRII CCWGG 3 cut(s) 675, 1327, 1467
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 1 cut(s) 1386
EcoT38I GRGCYC 1 cut(s) 264
EgeI GGCGCC 1 cut(s) 1333
EheI GGCGCC 1 cut(s) 1333
ErhI CCWWGG 1 cut(s) 1386
Esp3I CGTCTC 1 cut(s) 148
FaeI CATG 6 cut(s) 57, 456, 515, 632, 793, 1135
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 2 cut(s) 191, 626
FatI CATG 6 cut(s) 53, 452, 511, 628, 789, 1131
FauI CCCGC 2 cut(s) 293, 1414
FauNDI CATATG 1 cut(s) 936
FokI GGATG 4 cut(s) 279, 350, 362, 1247
FriOI GRGCYC 1 cut(s) 264
FspBI CTAG 5 cut(s) 311, 906, 1170, 1296, 1491
GlaI GCGC 2 cut(s) 330, 1333
GsaI CCCAGC 1 cut(s) 319
HaeII RGCGCY 2 cut(s) 332, 1335
HaeIII GGCC 2 cut(s) 574, 1249
HapII CCGG 3 cut(s) 170, 326, 1361
HgaI GACGC 2 cut(s) 19, 262
HhaI GCGC 2 cut(s) 331, 1334
Hin1I GRCGYC 1 cut(s) 1332
Hin1II CATG 6 cut(s) 57, 456, 515, 632, 793, 1135
Hin6I GCGC 2 cut(s) 329, 1332
HinP1I GCGC 2 cut(s) 329, 1332
HincII GTYRAC 1 cut(s) 1504
HindII GTYRAC 1 cut(s) 1504
HindIII AAGCTT 1 cut(s) 494
HinfI GANTC 3 cut(s) 614, 899, 1472
HpaI GTTAAC 1 cut(s) 1504
HpaII CCGG 3 cut(s) 170, 326, 1361
HphI GGTGA 3 cut(s) 805, 1375, 1529
Hpy166II GTNNAC 4 cut(s) 1049, 1383, 1427, 1504
Hpy188I TCNGA 9 cut(s) 266, 538, 733, 847, 930, 1034, 1138, 1158, 1477
Hpy188III TCNNGA 6 cut(s) 253, 521, 546, 906, 1164, 1209
Hpy8I GTNNAC 4 cut(s) 1049, 1383, 1427, 1504
Hpy99I CGWCG 2 cut(s) 108, 278
HpyAV CCTTC 5 cut(s) 100, 257, 459, 585, 876
HpyCH4III ACNGT 4 cut(s) 205, 409, 421, 1046
HpyCH4IV ACGT 1 cut(s) 433
HpyCH4V TGCA 8 cut(s) 472, 515, 789, 878, 923, 973, 1145, 1288
HpyF10VI GCNNNNNNNGC 8 cut(s) 175, 181, 184, 187, 190, 236, 239, 1199
HpyF3I CTNAG 4 cut(s) 111, 623, 732, 1437
HpySE526I ACGT 1 cut(s) 433
Hsp92I GRCGYC 1 cut(s) 1332
Hsp92II CATG 6 cut(s) 57, 456, 515, 632, 793, 1135
HspAI GCGC 2 cut(s) 329, 1332
KasI GGCGCC 1 cut(s) 1331
KroI GCCGGC 1 cut(s) 325
KroNI GCCGGC 1 cut(s) 327
KspAI GTTAAC 1 cut(s) 1504
Kzo9I GATC 4 cut(s) 46, 488, 538, 1464
LguI GCTCTTC 1 cut(s) 295
LmnI GCTCC 5 cut(s) 16, 172, 775, 841, 1101
Lsp1109I GCAGC 8 cut(s) 6, 202, 257, 412, 577, 754, 773, 1116
LweI GCATC 2 cut(s) 257, 982
MaeI CTAG 5 cut(s) 311, 906, 1170, 1296, 1491
MaeII ACGT 1 cut(s) 433
MaeIII GTNAC 2 cut(s) 24, 698
MalI GATC 4 cut(s) 48, 490, 540, 1466
MbiI CCGCTC 1 cut(s) 288
MboI GATC 4 cut(s) 46, 488, 538, 1464
MboII GAAGA 8 cut(s) 138, 282, 290, 683, 894, 1106, 1388, 1490
MflI RGATCY 2 cut(s) 46, 538
MhlI GDGCHC 4 cut(s) 264, 414, 1303, 1360
MluI ACGCGT 1 cut(s) 28
Mly113I GGCGCC 1 cut(s) 1332
MlyI GAGTC 2 cut(s) 608, 1466
MmeI TCCRAC 2 cut(s) 1054, 1057
MreI CGCCGGCG 1 cut(s) 325
MroNI GCCGGC 1 cut(s) 325
MroXI GAANNNNTTC 1 cut(s) 886
MseI TTAA 5 cut(s) 81, 459, 636, 1311, 1503
MslI CAYNNNNRTG 1 cut(s) 778
MspI CCGG 3 cut(s) 170, 326, 1361
MspR9I CCNGG 4 cut(s) 677, 1329, 1361, 1469
MvaI CCWGG 3 cut(s) 677, 1329, 1469
MvnI CGCG 1 cut(s) 30
MwoI GCNNNNNNNGC 8 cut(s) 175, 181, 184, 187, 190, 236, 239, 1199
NaeI GCCGGC 1 cut(s) 327
NarI GGCGCC 1 cut(s) 1332
NciI CCSGG 1 cut(s) 1361
NdeI CATATG 1 cut(s) 936
NdeII GATC 4 cut(s) 46, 488, 538, 1464
NgoMIV GCCGGC 1 cut(s) 325
NlaIII CATG 6 cut(s) 57, 456, 515, 632, 793, 1135
NlaIV GGNNCC 5 cut(s) 48, 174, 837, 943, 1333
NmuCI GTSAC 2 cut(s) 24, 698
NspI RCATGY 1 cut(s) 1135
PciSI GCTCTTC 1 cut(s) 295
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PdiI GCCGGC 1 cut(s) 327
PdmI GAANNNNTTC 1 cut(s) 886
PfeI GAWTC 1 cut(s) 899
PfoI TCCNGGA 1 cut(s) 1467
PleI GAGTC 2 cut(s) 608, 1466
PluTI GGCGCC 1 cut(s) 1335
PpsI GAGTC 2 cut(s) 608, 1466
Ppu21I YACGTR 1 cut(s) 434
Psp6I CCWGG 3 cut(s) 675, 1327, 1467
PspFI CCCAGC 1 cut(s) 315
PspGI CCWGG 3 cut(s) 675, 1327, 1467
PspN4I GGNNCC 5 cut(s) 48, 174, 837, 943, 1333
PspPI GGNCC 2 cut(s) 1030, 1247
PstNI CAGNNNCTG 1 cut(s) 425
PsuI RGATCY 2 cut(s) 46, 538
RsaI GTAC 3 cut(s) 1050, 1428, 1495
RsaNI GTAC 3 cut(s) 1049, 1427, 1494
RseI CAYNNNNRTG 1 cut(s) 778
SapI GCTCTTC 1 cut(s) 295
SaqAI TTAA 5 cut(s) 81, 459, 636, 1311, 1503
Sau3AI GATC 4 cut(s) 46, 488, 538, 1464
Sau96I GGNCC 2 cut(s) 1030, 1247
ScaI AGTACT 1 cut(s) 1495
SchI GAGTC 2 cut(s) 608, 1466
ScrFI CCNGG 4 cut(s) 677, 1329, 1361, 1469
SduI GDGCHC 4 cut(s) 264, 414, 1303, 1360
SfaNI GCATC 2 cut(s) 257, 982
SfcI CTRYAG 1 cut(s) 332
SfoI GGCGCC 1 cut(s) 1333
SgrAI CRCCGGYG 1 cut(s) 325
SinI GGWCC 1 cut(s) 1030
SmiMI CAYNNNNRTG 1 cut(s) 778
SmlI CTYRAG 4 cut(s) 477, 503, 521, 544
SmoI CTYRAG 4 cut(s) 477, 503, 521, 544
SpeI ACTAGT 2 cut(s) 1169, 1490
SspDI GGCGCC 1 cut(s) 1331
SspI AATATT 1 cut(s) 1055
SspMI CTAG 5 cut(s) 311, 906, 1170, 1296, 1491
StyD4I CCNGG 4 cut(s) 675, 1327, 1359, 1467
StyI CCWWGG 1 cut(s) 1386
TaaI ACNGT 4 cut(s) 205, 409, 421, 1046
TaiI ACGT 1 cut(s) 436
TaqI TCGA 3 cut(s) 1210, 1225, 1458
TatI WGTACW 2 cut(s) 1048, 1493
TauI GCSGC 9 cut(s) 178, 181, 184, 187, 190, 233, 242, 371, 590
TfiI GAWTC 1 cut(s) 899
Tru1I TTAA 5 cut(s) 81, 459, 636, 1311, 1503
Tru9I TTAA 5 cut(s) 81, 459, 636, 1311, 1503
TscAI CASTG 2 cut(s) 1051, 1274
TseFI GTSAC 2 cut(s) 24, 698
TseI GCWGC 8 cut(s) 19, 190, 270, 425, 590, 767, 786, 1104
Tsp45I GTSAC 2 cut(s) 24, 698
TspDTI ATGAA 2 cut(s) 354, 441
TspGWI ACGGA 1 cut(s) 362
TspRI CASTG 2 cut(s) 1051, 1274
VpaK11BI GGWCC 1 cut(s) 1030
XapI RAATTY 2 cut(s) 815, 1369
XbaI TCTAGA 1 cut(s) 905
XceI RCATGY 1 cut(s) 1135
XcmI CCANNNNNNNNNTGG 1 cut(s) 846
XmnI GAANNNNTTC 1 cut(s) 886
XspI CTAG 5 cut(s) 311, 906, 1170, 1296, 1491
ZrmI AGTACT 1 cut(s) 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.