Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007414

Physical Location & Seq

Genomic Coordinates Forward (+)

10900234 .. 10905427

Gene Structure 5194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G072100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1101 bp

ATGTGCTTGTTGATTTCAATGGCTGCCGCGGCAGAGTCAGCTGGGGAAAAGAAGAGGGTGGTGGTGATTGGAGGTGGGGTTGCTGGCTCTGTTGTTGCCAAGTCTCTCCAGTTCTGCGCTGATGTTGTTCTCATTGATGAGAAGGAGTATTTTGAGATCCCATGGGGAAGCTTGAGGGCAATGGTGGAGCCATCATTTGCTGAAAGATCAGTGATTAATCACTCCGATTATCTTCCCAATGTGAGGATTGTTGCATCTACTGCAGCTAACATAACAGAGCGTGAAGTGTTGACTACAGATGGCCATTTGCTTGTATATGAATATCTTGTTATTGCCACTGGTCACAAGGAAGCTGTTCCCAAAACCAGAGCTGAGAGGCTCAGTCATTATGAGGCAGAATTTGTTAAGATAAATTCTGCTAAATCAGTTTTAATTGTTGGAGGGGGCCCCACGGGTGTTGAACTTGCTGGTGAAATTGCTACGGATTTTCCAGAAAAGAAGGTGATACTGGTGCACAGGGGGTCAAGGCTGCTAGAATTCATTGGTTTGAAGGCGTCCCAAAAGGCACTCGATTGGTTGATATCAAAAAAAGTTGAAGTTATTTTGGATGAAACCATTAATTTGAACACTATATCTGATCCTATTATTCAAACACCTTCTGGAGAAATTATCACAGCTGATTGTCACTTTGTGTGCACGGGTAAACCAACAGGTTCATCATGGCTTAGGGGGACTATTGTGCAGAATAATTTGGATATGCAAGGAAGACTAATGGTTGATGAAAACTTGAGGGTTAGGGGTCATAAAAATATCTTCGCAGTAGGAGATATAACCAATATTAAGGAGATCAAACAAGGCTATTTAGCACAAAGACATGCTGAAGTGACTGCCAAGAACCTTAAGCTGTTGCTGATGGGAGGAAATGAAAGCAAGATGGCTACTTACAAGCCCGGTTTAGACATTGCACTTGTGTCACTTGGGAGGAACGAGGGAGTTGCGCAATTCCCATTATTGACAATTAGCGGTTGCATCCCTGGCATGATCAAATCTGGAGACTTATATGTAGGAAAGACAAGGAAACATCTTGGGCTAAAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

367

Amino Acids

39.7

Weight (kDa)

8.16

Isoelectric Point (pI)

27.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44190 AT3G44190 AT5G22140 AT5G22140
fragaria_vesca	FvH4_3g26670 FvH4_3g26670 FvH4_3g26670
malus_domestica	MD00G1071200.v1.1 MD02G1258500.v1.1
prunus_persica	Prupe.2G072100_v2.0.a1 Prupe.2G072100_v2.0.a1 Prupe.6G143400_v2.0.a1
pyrus_communis	pycom02g21970 pycom11g14620
rosa_chinensis	RchiOBHm_Chr5g0048121
rosa_laevigata	RLG00000034499
rosa_multiflora	Rmu_sc0001408.1_g000021
rosa_roxburghii	Rroxscaffold_1G00033780
rosa_rugosa	Rorug05G0236700 Rorug05G0236800
rosa_samantha	Rh5AG315900 Rh5BG326200 Rh5CG352700 Rh5DG337400
rosa_wichuraiana	Rw5G029610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	999
AccII	CGCG	1 cut(s)	29
AciI	CCGC	3 cut(s)	27, 29, 1023
AclWI	GGATC	2 cut(s)	151, 632
AcoI	YGGCCR	1 cut(s)	301
AcsI	RAATTY	3 cut(s)	398, 412, 536
AcuI	CTGAAG	1 cut(s)	900
AcyI	GRCGYC	1 cut(s)	554
AdeI	CACNNNGTG	1 cut(s)	691
AfiI	CCNNNNNNNGG	1 cut(s)	243
AflII	CTTAAG	1 cut(s)	899
AgsI	TTSAA	6 cut(s)	18, 461, 550, 596, 625, 650
AjnI	CCWGG	1 cut(s)	1033
AluBI	AGCT	7 cut(s)	41, 171, 266, 353, 371, 677, 904
AluI	AGCT	7 cut(s)	41, 171, 266, 353, 371, 677, 904
Alw21I	GWGCWC	2 cut(s)	516, 698
Alw26I	GTCTC	2 cut(s)	108, 1047
Alw44I	GTGCAC	2 cut(s)	512, 694
AlwI	GGATC	2 cut(s)	151, 632
AoxI	GGCC	2 cut(s)	301, 445
ApaI	GGGCCC	1 cut(s)	449
ApaLI	GTGCAC	2 cut(s)	512, 694
ApeKI	GCWGC	3 cut(s)	23, 263, 529
ApoI	RAATTY	3 cut(s)	398, 412, 536
AseI	ATTAAT	2 cut(s)	216, 618
Asp700I	GAANNNNTTC	1 cut(s)	354
AspLEI	GCGC	2 cut(s)	119, 1000
AspS9I	GGNCC	2 cut(s)	445, 446
AsuC2I	CCSGG	1 cut(s)	951
AsuHPI	GGTGA	3 cut(s)	76, 482, 514
BaeGI	GKGCMC	3 cut(s)	449, 516, 698
BalI	TGGCCA	1 cut(s)	303
BanII	GRGCYC	1 cut(s)	449
BbsI	GAAGAC	1 cut(s)	772
Bbv12I	GWGCWC	2 cut(s)	516, 698
BbvI	GCAGC	3 cut(s)	10, 275, 516
BccI	CCATC	4 cut(s)	199, 293, 907, 928
BcgI	CGANNNNNNTGC	2 cut(s)	977, 1011
BciT130I	CCWGG	1 cut(s)	1035
BclI	TGATCA	1 cut(s)	1041
BcnI	CCSGG	1 cut(s)	951
BcoDI	GTCTC	2 cut(s)	108, 1047
BfaI	CTAG	1 cut(s)	533
BfmI	CTRYAG	2 cut(s)	261, 294
BfrI	CTTAAG	1 cut(s)	899
BisI	GCNGC	5 cut(s)	24, 27, 30, 264, 530
BlsI	GCNGC	5 cut(s)	25, 28, 31, 265, 531
Bme1390I	CCNGG	2 cut(s)	951, 1035
BmgT120I	GGNCC	2 cut(s)	445, 446
BmiI	GGNNCC	4 cut(s)	189, 446, 447, 448
BmrFI	CCNGG	2 cut(s)	951, 1035
BmsI	GCATC	2 cut(s)	263, 1038
BpiI	GAAGAC	1 cut(s)	772
BpmI	CTGGAG	3 cut(s)	92, 681, 1071
Bpu10I	CCTNAGC	1 cut(s)	725
BpuEI	CTTGAG	2 cut(s)	193, 808
BpuMI	CCSGG	1 cut(s)	951
BsaHI	GRCGYC	1 cut(s)	554
BsaJI	CCNNGG	4 cut(s)	27, 161, 450, 1033
BsaXI	ACNNNNNCTCC	2 cut(s)	63, 93
Bsc4I	CCNNNNNNNGG	1 cut(s)	243
Bse1I	ACTGG	3 cut(s)	109, 343, 513
Bse3DI	GCAATG	2 cut(s)	186, 960
BseBI	CCWGG	1 cut(s)	1035
BseDI	CCNNGG	4 cut(s)	27, 161, 450, 1033
BseGI	GGATG	2 cut(s)	613, 1029
BseLI	CCNNNNNNNGG	1 cut(s)	243
BseMI	GCAATG	2 cut(s)	186, 960
BseMII	CTCAG	2 cut(s)	363, 394
BseNI	ACTGG	3 cut(s)	109, 343, 513
BseSI	GKGCMC	3 cut(s)	449, 516, 698
BseXI	GCAGC	3 cut(s)	10, 275, 516
BseYI	CCCAGC	1 cut(s)	41
BsgI	GTGCAG	1 cut(s)	761
Bsh1236I	CGCG	1 cut(s)	29
BshFI	GGCC	2 cut(s)	303, 447
BsiHKAI	GWGCWC	2 cut(s)	516, 698
BsiSI	CCGG	1 cut(s)	951
BslFI	GGGAC	2 cut(s)	541, 745
BslI	CCNNNNNNNGG	1 cut(s)	243
BsmAI	GTCTC	2 cut(s)	108, 1047
BsmFI	GGGAC	2 cut(s)	541, 745
BsnI	GGCC	2 cut(s)	303, 447
Bsp120I	GGGCCC	1 cut(s)	445
Bsp1286I	GDGCHC	3 cut(s)	449, 516, 698
Bsp143I	GATC	5 cut(s)	156, 206, 637, 846, 1041
Bsp19I	CCATGG	1 cut(s)	161
BspACI	CCGC	3 cut(s)	27, 29, 1023
BspANI	GGCC	2 cut(s)	303, 447
BspCNI	CTCAG	2 cut(s)	364, 393
BspFNI	CGCG	1 cut(s)	29
BspLI	GGNNCC	4 cut(s)	189, 446, 447, 448
BspMAI	CTGCAG	1 cut(s)	265
BspPI	GGATC	2 cut(s)	151, 632
BspTI	CTTAAG	1 cut(s)	899
BsrDI	GCAATG	2 cut(s)	186, 960
BsrI	ACTGG	3 cut(s)	109, 343, 513
BssECI	CCNNGG	4 cut(s)	27, 161, 450, 1033
BssMI	GATC	5 cut(s)	156, 206, 637, 846, 1041
BssNI	GRCGYC	1 cut(s)	554
BssT1I	CCWWGG	1 cut(s)	161
Bst2UI	CCWGG	1 cut(s)	1035
Bst6I	CTCTTC	1 cut(s)	47
BstACI	GRCGYC	1 cut(s)	554
BstAFI	CTTAAG	1 cut(s)	899
BstAPI	GCANNNNNTGC	1 cut(s)	260
BstC8I	GCNNGC	1 cut(s)	85
BstDEI	CTNAG	3 cut(s)	372, 380, 725
BstDSI	CCRYGG	3 cut(s)	27, 161, 450
BstF5I	GGATG	2 cut(s)	613, 1029
BstFNI	CGCG	1 cut(s)	29
BstHHI	GCGC	2 cut(s)	119, 1000
BstKTI	GATC	5 cut(s)	159, 209, 640, 849, 1044
BstMAI	GTCTC	2 cut(s)	108, 1047
BstMBI	GATC	5 cut(s)	156, 206, 637, 846, 1041
BstMWI	GCNNNNNNNGC	4 cut(s)	29, 38, 260, 1035
BstNI	CCWGG	1 cut(s)	1035
BstNSI	RCATGY	1 cut(s)	878
BstSCI	CCNGG	2 cut(s)	949, 1033
BstSFI	CTRYAG	2 cut(s)	261, 294
BstSLI	GKGCMC	3 cut(s)	449, 516, 698
BstUI	CGCG	1 cut(s)	29
BstV1I	GCAGC	3 cut(s)	10, 275, 516
BstV2I	GAAGAC	1 cut(s)	772
BstX2I	RGATCY	1 cut(s)	156
BstYI	RGATCY	1 cut(s)	156
BsuRI	GGCC	2 cut(s)	303, 447
BtgI	CCRYGG	3 cut(s)	27, 161, 450
BtsCI	GGATG	2 cut(s)	613, 1029
BtsIMutI	CAGTG	2 cut(s)	216, 336
Cac8I	GCNNGC	1 cut(s)	85
CfoI	GCGC	2 cut(s)	119, 1000
Cfr13I	GGNCC	2 cut(s)	445, 446
Cfr42I	CCGCGG	1 cut(s)	30
CseI	GACGC	1 cut(s)	543
CspCI	CAANNNNNGTGG	2 cut(s)	439, 474
CviAII	CATG	4 cut(s)	162, 720, 875, 1039
DdeI	CTNAG	3 cut(s)	372, 380, 725
DpnI	GATC	5 cut(s)	158, 208, 639, 848, 1043
DpnII	GATC	5 cut(s)	156, 206, 637, 846, 1041
DraIII	CACNNNGTG	1 cut(s)	691
EaeI	YGGCCR	1 cut(s)	301
Eam1104I	CTCTTC	1 cut(s)	47
EarI	CTCTTC	1 cut(s)	47
Eco130I	CCWWGG	1 cut(s)	161
Eco24I	GRGCYC	1 cut(s)	449
Eco32I	GATATC	1 cut(s)	582
Eco57I	CTGAAG	1 cut(s)	900
EcoO109I	RGGNCCY	2 cut(s)	445, 446
EcoRI	GAATTC	1 cut(s)	536
EcoRII	CCWGG	1 cut(s)	1033
EcoRV	GATATC	1 cut(s)	582
EcoT14I	CCWWGG	1 cut(s)	161
EcoT38I	GRGCYC	1 cut(s)	449
ErhI	CCWWGG	1 cut(s)	161
FaeI	CATG	4 cut(s)	165, 723, 878, 1042
FaqI	GGGAC	2 cut(s)	541, 745
FatI	CATG	4 cut(s)	161, 719, 874, 1038
FbaI	TGATCA	1 cut(s)	1041
Fnu4HI	GCNGC	5 cut(s)	24, 27, 30, 264, 530
FokI	GGATG	2 cut(s)	620, 1016
FriOI	GRGCYC	1 cut(s)	449
Fsp4HI	GCNGC	5 cut(s)	24, 27, 30, 264, 530
FspBI	CTAG	1 cut(s)	533
FspI	TGCGCA	1 cut(s)	999
GlaI	GCGC	2 cut(s)	118, 999
GluI	GCNGC	5 cut(s)	24, 27, 30, 264, 530
GsaI	CCCAGC	1 cut(s)	45
GsuI	CTGGAG	3 cut(s)	92, 681, 1071
HaeIII	GGCC	2 cut(s)	303, 447
HapII	CCGG	1 cut(s)	951
HgaI	GACGC	1 cut(s)	543
HhaI	GCGC	2 cut(s)	119, 1000
Hin1I	GRCGYC	1 cut(s)	554
Hin1II	CATG	4 cut(s)	165, 723, 878, 1042
Hin6I	GCGC	2 cut(s)	117, 998
HinP1I	GCGC	2 cut(s)	117, 998
HincII	GTYRAC	1 cut(s)	291
HindII	GTYRAC	1 cut(s)	291
HindIII	AAGCTT	1 cut(s)	169
HinfI	GANTC	1 cut(s)	35
HpaII	CCGG	1 cut(s)	951
HphI	GGTGA	3 cut(s)	76, 482, 514
Hpy166II	GTNNAC	4 cut(s)	291, 514, 696, 704
Hpy188I	TCNGA	2 cut(s)	226, 637
Hpy188III	TCNNGA	3 cut(s)	491, 660, 1050
Hpy8I	GTNNAC	4 cut(s)	291, 514, 696, 704
HpyAV	CCTTC	4 cut(s)	136, 493, 544, 666
HpyCH4V	TGCA	8 cut(s)	254, 263, 514, 696, 742, 760, 965, 1029
HpyF10VI	GCNNNNNNNGC	4 cut(s)	29, 38, 260, 1035
HpyF3I	CTNAG	3 cut(s)	372, 380, 725
Hsp92I	GRCGYC	1 cut(s)	554
Hsp92II	CATG	4 cut(s)	165, 723, 878, 1042
HspAI	GCGC	2 cut(s)	117, 998
Ksp22I	TGATCA	1 cut(s)	1041
KspI	CCGCGG	1 cut(s)	30
Kzo9I	GATC	5 cut(s)	156, 206, 637, 846, 1041
LmnI	GCTCC	1 cut(s)	187
Lsp1109I	GCAGC	3 cut(s)	10, 275, 516
LweI	GCATC	2 cut(s)	263, 1038
MaeI	CTAG	1 cut(s)	533
MaeIII	GTNAC	4 cut(s)	341, 683, 883, 972
MalI	GATC	5 cut(s)	158, 208, 639, 848, 1043
MboI	GATC	5 cut(s)	156, 206, 637, 846, 1041
MboII	GAAGA	4 cut(s)	64, 224, 777, 805
MflI	RGATCY	1 cut(s)	156
MhlI	GDGCHC	3 cut(s)	449, 516, 698
MlsI	TGGCCA	1 cut(s)	303
MluNI	TGGCCA	1 cut(s)	303
MlyI	GAGTC	1 cut(s)	44
MmeI	TCCRAC	1 cut(s)	418
Mox20I	TGGCCA	1 cut(s)	303
MroXI	GAANNNNTTC	1 cut(s)	354
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	6 cut(s)	216, 405, 431, 618, 840, 900
Msp20I	TGGCCA	1 cut(s)	303
MspA1I	CMGCKG	3 cut(s)	29, 41, 677
MspCI	CTTAAG	1 cut(s)	899
MspI	CCGG	1 cut(s)	951
MspR9I	CCNGG	2 cut(s)	951, 1035
MvaI	CCWGG	1 cut(s)	1035
MvnI	CGCG	1 cut(s)	29
MwoI	GCNNNNNNNGC	4 cut(s)	29, 38, 260, 1035
NciI	CCSGG	1 cut(s)	951
NcoI	CCATGG	1 cut(s)	161
NdeII	GATC	5 cut(s)	156, 206, 637, 846, 1041
NlaIII	CATG	4 cut(s)	165, 723, 878, 1042
NlaIV	GGNNCC	4 cut(s)	189, 446, 447, 448
NmuCI	GTSAC	4 cut(s)	341, 683, 883, 972
NsbI	TGCGCA	1 cut(s)	999
NspI	RCATGY	1 cut(s)	878
PdmI	GAANNNNTTC	1 cut(s)	354
PkrI	GCNGC	5 cut(s)	25, 28, 31, 265, 531
PleI	GAGTC	1 cut(s)	43
PpsI	GAGTC	1 cut(s)	43
PshBI	ATTAAT	2 cut(s)	216, 618
Psp6I	CCWGG	1 cut(s)	1033
PspFI	CCCAGC	1 cut(s)	41
PspGI	CCWGG	1 cut(s)	1033
PspN4I	GGNNCC	4 cut(s)	189, 446, 447, 448
PspOMI	GGGCCC	1 cut(s)	445
PspPI	GGNCC	2 cut(s)	445, 446
PstI	CTGCAG	1 cut(s)	265
PsuI	RGATCY	1 cut(s)	156
PvuII	CAGCTG	2 cut(s)	41, 677
SacII	CCGCGG	1 cut(s)	30
SaqAI	TTAA	6 cut(s)	216, 405, 431, 618, 840, 900
SatI	GCNGC	5 cut(s)	24, 27, 30, 264, 530
Sau3AI	GATC	5 cut(s)	156, 206, 637, 846, 1041
Sau96I	GGNCC	2 cut(s)	445, 446
SchI	GAGTC	1 cut(s)	44
ScrFI	CCNGG	2 cut(s)	951, 1035
SduI	GDGCHC	3 cut(s)	449, 516, 698
SfaNI	GCATC	2 cut(s)	263, 1038
SfcI	CTRYAG	2 cut(s)	261, 294
Sfr303I	CCGCGG	1 cut(s)	30
SgrBI	CCGCGG	1 cut(s)	30
SmlI	CTYRAG	3 cut(s)	172, 787, 899
SmoI	CTYRAG	3 cut(s)	172, 787, 899
SsiI	CCGC	3 cut(s)	27, 29, 1023
SspI	AATATT	1 cut(s)	838
SspMI	CTAG	1 cut(s)	533
StyD4I	CCNGG	2 cut(s)	949, 1033
StyI	CCWWGG	1 cut(s)	161
TaqI	TCGA	1 cut(s)	570
TauI	GCSGC	2 cut(s)	29, 32
Tru1I	TTAA	6 cut(s)	216, 405, 431, 618, 840, 900
Tru9I	TTAA	6 cut(s)	216, 405, 431, 618, 840, 900
TscAI	CASTG	2 cut(s)	216, 343
TseFI	GTSAC	4 cut(s)	341, 683, 883, 972
TseI	GCWGC	3 cut(s)	23, 263, 529
Tsp45I	GTSAC	4 cut(s)	341, 683, 883, 972
TspDTI	ATGAA	6 cut(s)	333, 529, 624, 705, 795, 939
TspGWI	ACGGA	1 cut(s)	497
TspRI	CASTG	2 cut(s)	216, 343
Vha464I	CTTAAG	1 cut(s)	899
VneI	GTGCAC	2 cut(s)	512, 694
VspI	ATTAAT	2 cut(s)	216, 618
XapI	RAATTY	3 cut(s)	398, 412, 536
XceI	RCATGY	1 cut(s)	878
XmnI	GAANNNNTTC	1 cut(s)	354
XspI	CTAG	1 cut(s)	533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.