Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0016912

Physical Location & Seq

Genomic Coordinates Reverse (-)

11073036 .. 11073911

Gene Structure 876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G073300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 675 bp

ATGGCTGTGCAGAGGGAGTTTTGCATTATATTAGCTGTGATGGTGGTTGTTTTGGTTGTTCCATCCTATGGCTGCTCCCAGAACGGCAGCGGGGGCGTGAGATACTCAGTCGGAGACACATTCTGGGCCATACCTCCAATTGTTGGTTACTACTCCAACTGGTCTTCTAACCATTTCTTCAAGATCGGCGACTCTCTCGTTTTTGACTTCGAAGCGGGGCGTTTCAATGTGCTGCAAGTGACAAAGAAAGAGTATGATAGCTGCACAGCTTACAAGCCCTTGAAGGTCTTCAACAGTGGTCCAGTGAATATTCCATTGCGAGAAAAGGGCGTGTTCTACTACATGTGCAACATCTCAAACTACTGTAGTCTTGGGCAAAAGATTTCCATTGCAGTTAATGAGTGCCCCTGCGCCACACCAAGTCCATCACCGTCTTCCCCTCCTCGTGCTTCTCCACCTCCTGTTCCGCCATCTTCATCGCCACAGATACCGGCTCTGCTGCCGTCTCCAGATAACTCCCGGCCTCCTTATGTGCAAGTTACAAGTCCAGCTCCGTCCACAGTTGATAATGGTTCCCCTCAGGGTCCTTCAAACTCTGCAGCATTGATACACAAAGGGGTGCTTCTTGGCTGGCTTTCCCAATTGGTGTTACTTCTTGTTTTTGTGTTGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002239 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006979 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009605 GO:0009607 GO:0009628 GO:0009642 GO:0009646 GO:0009889 GO:0009987 GO:0015690 GO:0016020 GO:0019222 GO:0030001 GO:0031224 GO:0031225 GO:0031226 GO:0031323 GO:0031326 GO:0033554 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043455 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046658 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070417 GO:0071944 GO:0072512 GO:1900376 GO:1901141 GO:2000762

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu_bind_like

Protein Analysis

225

Amino Acids

24.08

Weight (kDa)

8.45

Isoelectric Point (pI)

65.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016912)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g05250
malus_domestica	MD07G1062400.v1.1
prunus_persica	Prupe.2G073300_v2.0.a1
pyrus_communis	pycom07g04790
rosa_chinensis	RchiOBHm_Chr1g0332061
rosa_laevigata	RLG00000029695
rosa_multiflora	Rmu_sc0003358.1_g000009
rosa_roxburghii	Rroxscaffold_4G00318410
rosa_rugosa	Rorug01G0098100
rosa_samantha	Rh1AG122000 Rh1BG093400 Rh1CG116600 Rh1DG127700
rosa_wichuraiana	Rw1G009940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	68, 143
AciI	CCGC	3 cut(s)	90, 215, 467
AfiI	CCNNNNNNNGG	2 cut(s)	68, 143
AflIII	ACRYGT	1 cut(s)	342
AgsI	TTSAA	5 cut(s)	181, 226, 283, 292, 591
AluBI	AGCT	4 cut(s)	35, 261, 269, 551
AluI	AGCT	4 cut(s)	35, 261, 269, 551
Alw26I	GTCTC	2 cut(s)	108, 510
AoxI	GGCC	2 cut(s)	126, 521
ApeKI	GCWGC	6 cut(s)	72, 87, 232, 261, 499, 599
Asp700I	GAANNNNTTC	1 cut(s)	287
AspLEI	GCGC	1 cut(s)	413
AspS9I	GGNCC	3 cut(s)	126, 299, 584
AsuC2I	CCSGG	1 cut(s)	520
AsuHPI	GGTGA	1 cut(s)	420
AsuII	TTCGAA	1 cut(s)	210
AvaII	GGWCC	2 cut(s)	299, 584
AxyI	CCTNAGG	1 cut(s)	579
BaeGI	GKGCMC	1 cut(s)	407
BauI	CACGAG	1 cut(s)	444
BbsI	GAAGAC	3 cut(s)	156, 280, 426
BbvI	GCAGC	6 cut(s)	59, 99, 219, 248, 486, 611
BccI	CCATC	4 cut(s)	34, 70, 433, 478
BceAI	ACGGC	2 cut(s)	100, 487
BcnI	CCSGG	1 cut(s)	520
BcoDI	GTCTC	2 cut(s)	108, 510
BfaI	CTAG	1 cut(s)	673
BfmI	CTRYAG	2 cut(s)	364, 597
BisI	GCNGC	6 cut(s)	73, 88, 233, 262, 500, 600
BlsI	GCNGC	6 cut(s)	74, 89, 234, 263, 501, 601
Bme1390I	CCNGG	1 cut(s)	520
Bme18I	GGWCC	2 cut(s)	299, 584
BmgT120I	GGNCC	3 cut(s)	126, 299, 584
BmiI	GGNNCC	2 cut(s)	574, 585
BmrFI	CCNGG	1 cut(s)	520
BpiI	GAAGAC	3 cut(s)	156, 280, 426
BpmI	CTGGAG	1 cut(s)	492
Bpu14I	TTCGAA	1 cut(s)	210
BpuMI	CCSGG	1 cut(s)	520
Bsc4I	CCNNNNNNNGG	2 cut(s)	68, 143
Bse118I	RCCGGY	1 cut(s)	490
Bse1I	ACTGG	2 cut(s)	164, 302
Bse21I	CCTNAGG	1 cut(s)	579
Bse3DI	GCAATG	2 cut(s)	314, 387
BseGI	GGATG	1 cut(s)	62
BseLI	CCNNNNNNNGG	2 cut(s)	68, 143
BseMI	GCAATG	2 cut(s)	314, 387
BseMII	CTCAG	2 cut(s)	120, 593
BseNI	ACTGG	2 cut(s)	164, 302
BseRI	GAGGAG	1 cut(s)	432
BseSI	GKGCMC	1 cut(s)	407
BseXI	GCAGC	6 cut(s)	59, 99, 219, 248, 486, 611
BsgI	GTGCAG	2 cut(s)	29, 247
BshFI	GGCC	2 cut(s)	128, 523
BsiSI	CCGG	2 cut(s)	491, 520
BslI	CCNNNNNNNGG	2 cut(s)	68, 143
BsmAI	GTCTC	2 cut(s)	108, 510
BsmBI	CGTCTC	1 cut(s)	510
BsnI	GGCC	2 cut(s)	128, 523
Bsp119I	TTCGAA	1 cut(s)	210
Bsp1286I	GDGCHC	1 cut(s)	407
Bsp143I	GATC	1 cut(s)	183
BspACI	CCGC	3 cut(s)	90, 215, 467
BspANI	GGCC	2 cut(s)	128, 523
BspCNI	CTCAG	2 cut(s)	119, 592
BspLI	GGNNCC	2 cut(s)	574, 585
BspMAI	CTGCAG	1 cut(s)	601
BspT104I	TTCGAA	1 cut(s)	210
BsrDI	GCAATG	2 cut(s)	314, 387
BsrFI	RCCGGY	1 cut(s)	490
BsrI	ACTGG	2 cut(s)	164, 302
BssAI	RCCGGY	1 cut(s)	490
BssMI	GATC	1 cut(s)	183
BssSI	CACGAG	1 cut(s)	444
Bst2BI	CACGAG	1 cut(s)	444
Bst4CI	ACNGT	4 cut(s)	296, 365, 432, 562
BstBI	TTCGAA	1 cut(s)	210
BstC8I	GCNNGC	1 cut(s)	632
BstDEI	CTNAG	2 cut(s)	106, 579
BstF5I	GGATG	1 cut(s)	62
BstHHI	GCGC	1 cut(s)	413
BstKTI	GATC	1 cut(s)	186
BstMAI	GTCTC	2 cut(s)	108, 510
BstMBI	GATC	1 cut(s)	183
BstMWI	GCNNNNNNNGC	1 cut(s)	93
BstNSI	RCATGY	1 cut(s)	346
BstSCI	CCNGG	1 cut(s)	518
BstSFI	CTRYAG	2 cut(s)	364, 597
BstSLI	GKGCMC	1 cut(s)	407
BstV1I	GCAGC	6 cut(s)	59, 99, 219, 248, 486, 611
BstV2I	GAAGAC	3 cut(s)	156, 280, 426
Bsu36I	CCTNAGG	1 cut(s)	579
BsuRI	GGCC	2 cut(s)	128, 523
BtgZI	GCGATG	1 cut(s)	462
BtsCI	GGATG	1 cut(s)	62
BtsIMutI	CAGTG	2 cut(s)	301, 309
Cac8I	GCNNGC	1 cut(s)	632
CfoI	GCGC	1 cut(s)	413
Cfr10I	RCCGGY	1 cut(s)	490
Cfr13I	GGNCC	3 cut(s)	126, 299, 584
CviAII	CATG	1 cut(s)	343
DdeI	CTNAG	2 cut(s)	106, 579
DpnI	GATC	1 cut(s)	185
DpnII	GATC	1 cut(s)	183
EciI	GGCGGA	1 cut(s)	456
Eco47I	GGWCC	2 cut(s)	299, 584
Eco81I	CCTNAGG	1 cut(s)	579
EcoO109I	RGGNCCY	1 cut(s)	584
Esp3I	CGTCTC	1 cut(s)	510
FaeI	CATG	1 cut(s)	346
FaiI	YATR	6 cut(s)	29, 69, 131, 255, 344, 531
FalI	AAGNNNNNCTT	2 cut(s)	606, 638
FatI	CATG	1 cut(s)	342
FauI	CCCGC	2 cut(s)	83, 208
Fnu4HI	GCNGC	6 cut(s)	73, 88, 233, 262, 500, 600
FokI	GGATG	1 cut(s)	49
Fsp4HI	GCNGC	6 cut(s)	73, 88, 233, 262, 500, 600
FspBI	CTAG	1 cut(s)	673
GlaI	GCGC	1 cut(s)	412
GluI	GCNGC	6 cut(s)	73, 88, 233, 262, 500, 600
GsuI	CTGGAG	1 cut(s)	492
HaeIII	GGCC	2 cut(s)	128, 523
HapII	CCGG	2 cut(s)	491, 520
HhaI	GCGC	1 cut(s)	413
Hin1II	CATG	1 cut(s)	346
Hin6I	GCGC	1 cut(s)	411
HinP1I	GCGC	1 cut(s)	411
HinfI	GANTC	1 cut(s)	191
HpaII	CCGG	2 cut(s)	491, 520
HphI	GGTGA	1 cut(s)	420
Hpy166II	GTNNAC	1 cut(s)	558
Hpy188I	TCNGA	1 cut(s)	113
Hpy188III	TCNNGA	2 cut(s)	181, 509
Hpy8I	GTNNAC	1 cut(s)	558
HpyAV	CCTTC	2 cut(s)	277, 597
HpyCH4III	ACNGT	4 cut(s)	296, 365, 432, 562
HpyCH4V	TGCA	8 cut(s)	10, 24, 235, 264, 348, 392, 535, 599
HpyF10VI	GCNNNNNNNGC	1 cut(s)	93
HpyF3I	CTNAG	2 cut(s)	106, 579
Hsp92II	CATG	1 cut(s)	346
HspAI	GCGC	1 cut(s)	411
Kzo9I	GATC	1 cut(s)	183
LmnI	GCTCC	2 cut(s)	80, 556
Lsp1109I	GCAGC	6 cut(s)	59, 99, 219, 248, 486, 611
MaeI	CTAG	1 cut(s)	673
MaeIII	GTNAC	4 cut(s)	146, 238, 538, 648
MalI	GATC	1 cut(s)	185
MboI	GATC	1 cut(s)	183
MboII	GAAGA	5 cut(s)	156, 169, 280, 426, 465
MfeI	CAATTG	2 cut(s)	138, 641
MhlI	GDGCHC	1 cut(s)	407
MluCI	AATT	2 cut(s)	138, 641
MlyI	GAGTC	1 cut(s)	185
MmeI	TCCRAC	2 cut(s)	91, 180
MnlI	CCTC	7 cut(s)	6, 144, 450, 453, 468, 534, 588
MroXI	GAANNNNTTC	1 cut(s)	287
MseI	TTAA	1 cut(s)	396
MspA1I	CMGCKG	1 cut(s)	90
MspI	CCGG	2 cut(s)	491, 520
MspR9I	CCNGG	1 cut(s)	520
MunI	CAATTG	2 cut(s)	138, 641
MwoI	GCNNNNNNNGC	1 cut(s)	93
NciI	CCSGG	1 cut(s)	520
NdeII	GATC	1 cut(s)	183
NlaIII	CATG	1 cut(s)	346
NlaIV	GGNNCC	2 cut(s)	574, 585
NmuCI	GTSAC	1 cut(s)	238
NspI	RCATGY	1 cut(s)	346
NspV	TTCGAA	1 cut(s)	210
PciI	ACATGT	1 cut(s)	342
PdmI	GAANNNNTTC	1 cut(s)	287
PflMI	CCANNNNNTGG	2 cut(s)	68, 143
PkrI	GCNGC	6 cut(s)	74, 89, 234, 263, 501, 601
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
PpuMI	RGGWCCY	1 cut(s)	584
PscI	ACATGT	1 cut(s)	342
Psp5II	RGGWCCY	1 cut(s)	584
PspN4I	GGNNCC	2 cut(s)	574, 585
PspPI	GGNCC	3 cut(s)	126, 299, 584
PspPPI	RGGWCCY	1 cut(s)	584
PstI	CTGCAG	1 cut(s)	601
SaqAI	TTAA	1 cut(s)	396
SatI	GCNGC	6 cut(s)	73, 88, 233, 262, 500, 600
Sau3AI	GATC	1 cut(s)	183
Sau96I	GGNCC	3 cut(s)	126, 299, 584
SchI	GAGTC	1 cut(s)	185
ScrFI	CCNGG	1 cut(s)	520
SduI	GDGCHC	1 cut(s)	407
SetI	ASST	7 cut(s)	37, 136, 263, 271, 288, 460, 553
SfcI	CTRYAG	2 cut(s)	364, 597
SfuI	TTCGAA	1 cut(s)	210
SinI	GGWCC	2 cut(s)	299, 584
Sse9I	AATT	2 cut(s)	138, 641
SsiI	CCGC	3 cut(s)	90, 215, 467
SspI	AATATT	1 cut(s)	310
SspMI	CTAG	1 cut(s)	673
StyD4I	CCNGG	1 cut(s)	518
TaaI	ACNGT	4 cut(s)	296, 365, 432, 562
TaqI	TCGA	1 cut(s)	210
TasI	AATT	2 cut(s)	138, 641
Tru1I	TTAA	1 cut(s)	396
Tru9I	TTAA	1 cut(s)	396
TscAI	CASTG	2 cut(s)	301, 309
TseFI	GTSAC	1 cut(s)	238
TseI	GCWGC	6 cut(s)	72, 87, 232, 261, 499, 599
Tsp45I	GTSAC	1 cut(s)	238
TspDTI	ATGAA	1 cut(s)	465
TspGWI	ACGGA	1 cut(s)	543
TspRI	CASTG	2 cut(s)	301, 309
Van91I	CCANNNNNTGG	2 cut(s)	68, 143
VpaK11BI	GGWCC	2 cut(s)	299, 584
XceI	RCATGY	1 cut(s)	346
XmnI	GAANNNNTTC	1 cut(s)	287
XspI	CTAG	1 cut(s)	673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.