Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0012066

Physical Location & Seq

Genomic Coordinates Forward (+)

15197713 .. 15200642

Gene Structure 2930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G096700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGACGAGCCTCTTATCCTTCACCCCAAGCACCCCCTCTCTCTACCTCCCCACTTTCTCTAACGTGCGCCATCATCATCGCCTCAGCTCCACCACCCTCCTTATCAGCTACCCGCATCCCCTTCCACGTGTCCAGGTCCTCTACCGTGCGCCGCATGCTCCCCGACGCCCATCCCTTTCCGCCTCCGCCCTACGCGCCGCCGCCGATGGCCTCTTGCAGGACGCCGGAGCCACCGCGTTTGTTCTCGCAGGCGCCTACGGCCTCGTCCTCTGCTTCGACAATCTCACGCAGCGAAACCTTCTCCAGCAGAGTTTAAGCAGAAAATTGGTGCATATATTGTCTGGGCTGCTCTTCATGCTTTCCTGGCCAATTTTCAGCACCTCAACAGCGGCTCGCTACTTTGCCACTGTGGTTCCCCTTGTCAATTGCTTGAGGCTTCTTCTTCATGGCCTCTCCATAGTCACCAATGAAGGACTAGTCAAATCTGTCACTCGAGAAGGAAACCCAAAGGAGTTGCTTAGAGGTCCTTTGTATTATGTTCTGATTTTGATTTTATGTGCTCTTGCATTTTGGCGTGAGTCTCCAGTTGGAGTGGTCTCCTTGGCAATGATGTGTGGTGGGGATGGTGTTGCTGATATCATGGGAAGAAAATTTGGGTCCATAAAGATCCCTTATAATCAAAAAAAGAGTTGGGCTGGTAGCATATCCATGTTTCTTTTTGGGTTCGTGATTTCCATTGGGATGCTCTACTATTACTCATTTCTGGGATATTTTCAATTGAATTGGGTCGAGACAGTTGAAAAGGTAGCATTGATTTCTCTGGTGGCAACAATAGTGGAGTCTCTTCCAATTACAGATGTACTAGATGACAATATATCTGTTCCATTGGTGAGCATGGCAGCAGCATACTTGAGTTTCTCTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006766 GO:0006775 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009058 GO:0009110 GO:0009507 GO:0009536 GO:0009987 GO:0010189 GO:0010276 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

309

Amino Acids

33.79

Weight (kDa)

9.39

Isoelectric Point (pI)

30.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04490 AT5G04490
fragaria_vesca	FvH4_7g06990 FvH4_7g06990 FvH4_7g06990
malus_domestica	MD07G1076000.v1.1
prunus_persica	Prupe.2G096700_v2.0.a1 Prupe.2G096700_v2.0.a1
pyrus_communis	pycom07g05990
rosa_chinensis	RchiOBHm_Chr1g0336921
rosa_laevigata	RLG00000029322
rosa_roxburghii	Rroxscaffold_4G00315190
rosa_rugosa	Rorug01G0128900 Rorug01G0128900
rosa_samantha	Rh1AG149900 Rh1CG141100 Rh1DG157000
rosa_wichuraiana	Rw1G012110 Rw1G012220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	675
AccB1I	GGYRCC	1 cut(s)	251
AccII	CGCG	2 cut(s)	195, 236
AciI	CCGC	8 cut(s)	113, 152, 180, 186, 198, 201, 234, 389
AclWI	GGATC	1 cut(s)	661
AcoI	YGGCCR	1 cut(s)	365
AcsI	RAATTY	1 cut(s)	650
AcvI	CACGTG	1 cut(s)	128
AcyI	GRCGYC	3 cut(s)	166, 222, 252
AfaI	GTAC	1 cut(s)	861
AfiI	CCNNNNNNNGG	1 cut(s)	217
AflIII	ACRYGT	1 cut(s)	127
AgsI	TTSAA	3 cut(s)	776, 781, 800
AhlI	ACTAGT	1 cut(s)	475
AjnI	CCWGG	2 cut(s)	132, 362
AluBI	AGCT	2 cut(s)	87, 108
AluI	AGCT	2 cut(s)	87, 108
Alw21I	GWGCWC	1 cut(s)	562
Alw26I	GTCTC	4 cut(s)	585, 601, 785, 846
AlwI	GGATC	1 cut(s)	661
Ama87I	CYCGRG	1 cut(s)	492
AoxI	GGCC	4 cut(s)	208, 259, 365, 448
ApeKI	GCWGC	4 cut(s)	289, 346, 899, 902
ApoI	RAATTY	1 cut(s)	650
AspLEI	GCGC	4 cut(s)	69, 151, 197, 254
AspS9I	GGNCC	3 cut(s)	136, 524, 657
AsuHPI	GGTGA	3 cut(s)	13, 454, 901
AvaI	CYCGRG	1 cut(s)	492
AvaII	GGWCC	3 cut(s)	136, 524, 657
BalI	TGGCCA	1 cut(s)	367
BanI	GGYRCC	1 cut(s)	251
BbrPI	CACGTG	1 cut(s)	128
Bbv12I	GWGCWC	1 cut(s)	562
BbvCI	CCTCAGC	1 cut(s)	83
BbvI	GCAGC	4 cut(s)	301, 333, 911, 914
BccI	CCATC	4 cut(s)	78, 178, 200, 617
BceAI	ACGGC	1 cut(s)	274
BciT130I	CCWGG	2 cut(s)	134, 364
BcoDI	GTCTC	4 cut(s)	585, 601, 785, 846
BcuI	ACTAGT	1 cut(s)	475
BfaI	CTAG	2 cut(s)	476, 863
BfoI	RGCGCY	1 cut(s)	255
BisI	GCNGC	8 cut(s)	152, 198, 201, 290, 347, 390, 900, 903
BlsI	GCNGC	8 cut(s)	153, 199, 202, 291, 348, 391, 901, 904
Bme1390I	CCNGG	2 cut(s)	134, 364
Bme18I	GGWCC	3 cut(s)	136, 524, 657
BmeT110I	CYCGRG	1 cut(s)	492
BmgT120I	GGNCC	3 cut(s)	136, 524, 657
BmiI	GGNNCC	4 cut(s)	229, 253, 414, 658
BmrFI	CCNGG	2 cut(s)	134, 364
BmsI	GCATC	2 cut(s)	124, 732
BpmI	CTGGAG	2 cut(s)	287, 567
Bpu10I	CCTNAGC	1 cut(s)	83
BpuEI	CTTGAG	1 cut(s)	451
BsaAI	YACGTR	1 cut(s)	128
BsaHI	GRCGYC	3 cut(s)	166, 222, 252
BsaI	GGTCTC	1 cut(s)	601
BsaJI	CCNNGG	1 cut(s)	600
Bsc4I	CCNNNNNNNGG	1 cut(s)	217
Bse1I	ACTGG	1 cut(s)	584
Bse3DI	GCAATG	1 cut(s)	612
BseBI	CCWGG	2 cut(s)	134, 364
BseDI	CCNNGG	1 cut(s)	600
BseGI	GGATG	4 cut(s)	115, 170, 628, 747
BseLI	CCNNNNNNNGG	1 cut(s)	217
BseMI	GCAATG	1 cut(s)	612
BseMII	CTCAG	1 cut(s)	97
BseNI	ACTGG	1 cut(s)	584
BseXI	GCAGC	4 cut(s)	301, 333, 911, 914
Bsh1236I	CGCG	2 cut(s)	195, 236
BshFI	GGCC	4 cut(s)	210, 261, 367, 450
BshNI	GGYRCC	1 cut(s)	251
BsiHKAI	GWGCWC	1 cut(s)	562
BsiHKCI	CYCGRG	1 cut(s)	492
BsiSI	CCGG	1 cut(s)	225
BslI	CCNNNNNNNGG	1 cut(s)	217
BsmAI	GTCTC	4 cut(s)	585, 601, 785, 846
BsnI	GGCC	4 cut(s)	210, 261, 367, 450
Bso31I	GGTCTC	1 cut(s)	601
BsoBI	CYCGRG	1 cut(s)	492
Bsp1286I	GDGCHC	1 cut(s)	562
Bsp143I	GATC	1 cut(s)	666
BspACI	CCGC	8 cut(s)	113, 152, 180, 186, 198, 201, 234, 389
BspANI	GGCC	4 cut(s)	210, 261, 367, 450
BspCNI	CTCAG	1 cut(s)	96
BspFNI	CGCG	2 cut(s)	195, 236
BspLI	GGNNCC	4 cut(s)	229, 253, 414, 658
BspPI	GGATC	1 cut(s)	661
BspQI	GCTCTTC	1 cut(s)	356
BspT107I	GGYRCC	1 cut(s)	251
BspTNI	GGTCTC	1 cut(s)	601
BsrDI	GCAATG	1 cut(s)	612
BsrI	ACTGG	1 cut(s)	584
BssECI	CCNNGG	1 cut(s)	600
BssMI	GATC	1 cut(s)	666
BssNI	GRCGYC	3 cut(s)	166, 222, 252
BssT1I	CCWWGG	1 cut(s)	600
Bst2UI	CCWGG	2 cut(s)	134, 364
Bst4CI	ACNGT	3 cut(s)	146, 409, 796
Bst6I	CTCTTC	2 cut(s)	356, 849
BstACI	GRCGYC	3 cut(s)	166, 222, 252
BstBAI	YACGTR	1 cut(s)	128
BstC8I	GCNNGC	3 cut(s)	156, 250, 394
BstDEI	CTNAG	2 cut(s)	83, 518
BstENI	CCTNNNNNAGG	1 cut(s)	215
BstF5I	GGATG	4 cut(s)	115, 170, 628, 747
BstFNI	CGCG	2 cut(s)	195, 236
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	4 cut(s)	69, 151, 197, 254
BstKTI	GATC	1 cut(s)	669
BstMAI	GTCTC	4 cut(s)	585, 601, 785, 846
BstMBI	GATC	1 cut(s)	666
BstMWI	GCNNNNNNNGC	5 cut(s)	155, 194, 258, 355, 364
BstNI	CCWGG	2 cut(s)	134, 364
BstNSI	RCATGY	1 cut(s)	158
BstSCI	CCNGG	2 cut(s)	132, 362
BstUI	CGCG	2 cut(s)	195, 236
BstV1I	GCAGC	4 cut(s)	301, 333, 911, 914
BstX2I	RGATCY	1 cut(s)	666
BstYI	RGATCY	1 cut(s)	666
BsuRI	GGCC	4 cut(s)	210, 261, 367, 450
BtgZI	GCGATG	1 cut(s)	62
BtsCI	GGATG	4 cut(s)	115, 170, 628, 747
BtsIMutI	CAGTG	1 cut(s)	405
Cac8I	GCNNGC	3 cut(s)	156, 250, 394
CfoI	GCGC	4 cut(s)	69, 151, 197, 254
Cfr13I	GGNCC	3 cut(s)	136, 524, 657
CseI	GACGC	2 cut(s)	174, 230
Csp6I	GTAC	1 cut(s)	860
CspCI	CAANNNNNGTGG	4 cut(s)	220, 255, 816, 851
CviAII	CATG	6 cut(s)	155, 355, 446, 640, 709, 895
CviQI	GTAC	1 cut(s)	860
DdeI	CTNAG	2 cut(s)	83, 518
DinI	GGCGCC	1 cut(s)	253
DpnI	GATC	1 cut(s)	668
DpnII	GATC	1 cut(s)	666
EaeI	YGGCCR	1 cut(s)	365
Eam1104I	CTCTTC	2 cut(s)	356, 849
EarI	CTCTTC	2 cut(s)	356, 849
EciI	GGCGGA	2 cut(s)	169, 175
Eco130I	CCWWGG	1 cut(s)	600
Eco31I	GGTCTC	1 cut(s)	601
Eco32I	GATATC	1 cut(s)	637
Eco47I	GGWCC	3 cut(s)	136, 524, 657
Eco72I	CACGTG	1 cut(s)	128
Eco88I	CYCGRG	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	215
EcoO109I	RGGNCCY	2 cut(s)	136, 524
EcoRII	CCWGG	2 cut(s)	132, 362
EcoRV	GATATC	1 cut(s)	637
EcoT14I	CCWWGG	1 cut(s)	600
EgeI	GGCGCC	1 cut(s)	253
EheI	GGCGCC	1 cut(s)	253
ErhI	CCWWGG	1 cut(s)	600
FaeI	CATG	6 cut(s)	158, 358, 449, 643, 712, 898
FatI	CATG	6 cut(s)	154, 354, 445, 639, 708, 894
FauI	CCCGC	1 cut(s)	120
Fnu4HI	GCNGC	8 cut(s)	152, 198, 201, 290, 347, 390, 900, 903
FokI	GGATG	4 cut(s)	102, 157, 635, 754
Fsp4HI	GCNGC	8 cut(s)	152, 198, 201, 290, 347, 390, 900, 903
FspBI	CTAG	2 cut(s)	476, 863
GlaI	GCGC	4 cut(s)	68, 150, 196, 253
GluI	GCNGC	8 cut(s)	152, 198, 201, 290, 347, 390, 900, 903
GsuI	CTGGAG	2 cut(s)	287, 567
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	4 cut(s)	210, 261, 367, 450
HapII	CCGG	1 cut(s)	225
HgaI	GACGC	2 cut(s)	174, 230
HhaI	GCGC	4 cut(s)	69, 151, 197, 254
Hin1I	GRCGYC	3 cut(s)	166, 222, 252
Hin1II	CATG	6 cut(s)	158, 358, 449, 643, 712, 898
Hin6I	GCGC	4 cut(s)	67, 149, 195, 252
HinP1I	GCGC	4 cut(s)	67, 149, 195, 252
HinfI	GANTC	2 cut(s)	578, 839
HpaII	CCGG	1 cut(s)	225
HphI	GGTGA	3 cut(s)	13, 454, 901
Hpy188I	TCNGA	1 cut(s)	543
Hpy188III	TCNNGA	3 cut(s)	494, 727, 790
Hpy99I	CGWCG	1 cut(s)	168
HpyAV	CCTTC	5 cut(s)	28, 131, 308, 464, 491
HpyCH4III	ACNGT	3 cut(s)	146, 409, 796
HpyCH4IV	ACGT	2 cut(s)	63, 127
HpyCH4V	TGCA	3 cut(s)	217, 331, 566
HpyF10VI	GCNNNNNNNGC	5 cut(s)	155, 194, 258, 355, 364
HpyF3I	CTNAG	2 cut(s)	83, 518
HpySE526I	ACGT	2 cut(s)	63, 127
Hsp92I	GRCGYC	3 cut(s)	166, 222, 252
Hsp92II	CATG	6 cut(s)	158, 358, 449, 643, 712, 898
HspAI	GCGC	4 cut(s)	67, 149, 195, 252
KasI	GGCGCC	1 cut(s)	251
Kzo9I	GATC	1 cut(s)	666
LguI	GCTCTTC	1 cut(s)	356
LmnI	GCTCC	3 cut(s)	92, 163, 227
Lsp1109I	GCAGC	4 cut(s)	301, 333, 911, 914
LweI	GCATC	2 cut(s)	124, 732
MaeI	CTAG	2 cut(s)	476, 863
MaeII	ACGT	2 cut(s)	63, 127
MaeIII	GTNAC	2 cut(s)	460, 487
MalI	GATC	1 cut(s)	668
MboI	GATC	1 cut(s)	666
MboII	GAAGA	5 cut(s)	343, 431, 434, 657, 836
MfeI	CAATTG	2 cut(s)	424, 776
MflI	RGATCY	1 cut(s)	666
MhlI	GDGCHC	1 cut(s)	562
MlsI	TGGCCA	1 cut(s)	367
MluCI	AATT	7 cut(s)	323, 369, 424, 650, 776, 781, 849
MluNI	TGGCCA	1 cut(s)	367
Mly113I	GGCGCC	1 cut(s)	252
MlyI	GAGTC	2 cut(s)	587, 848
MmeI	TCCRAC	1 cut(s)	568
Mox20I	TGGCCA	1 cut(s)	367
MscI	TGGCCA	1 cut(s)	367
MseI	TTAA	1 cut(s)	314
MslI	CAYNNNNRTG	2 cut(s)	707, 740
Msp20I	TGGCCA	1 cut(s)	367
MspA1I	CMGCKG	1 cut(s)	389
MspI	CCGG	1 cut(s)	225
MspR9I	CCNGG	2 cut(s)	134, 364
MunI	CAATTG	2 cut(s)	424, 776
MvaI	CCWGG	2 cut(s)	134, 364
MvnI	CGCG	2 cut(s)	195, 236
MwoI	GCNNNNNNNGC	5 cut(s)	155, 194, 258, 355, 364
NarI	GGCGCC	1 cut(s)	252
NdeII	GATC	1 cut(s)	666
NlaIII	CATG	6 cut(s)	158, 358, 449, 643, 712, 898
NlaIV	GGNNCC	4 cut(s)	229, 253, 414, 658
NmuCI	GTSAC	2 cut(s)	460, 487
NspI	RCATGY	1 cut(s)	158
PaeI	GCATGC	1 cut(s)	158
PaeR7I	CTCGAG	1 cut(s)	492
PciSI	GCTCTTC	1 cut(s)	356
PkrI	GCNGC	8 cut(s)	153, 199, 202, 291, 348, 391, 901, 904
PleI	GAGTC	2 cut(s)	586, 847
PluTI	GGCGCC	1 cut(s)	255
PmaCI	CACGTG	1 cut(s)	128
PmlI	CACGTG	1 cut(s)	128
PpsI	GAGTC	2 cut(s)	586, 847
Ppu21I	YACGTR	1 cut(s)	128
PpuMI	RGGWCCY	2 cut(s)	136, 524
PsiI	TTATAA	1 cut(s)	675
Psp5II	RGGWCCY	2 cut(s)	136, 524
Psp6I	CCWGG	2 cut(s)	132, 362
PspCI	CACGTG	1 cut(s)	128
PspGI	CCWGG	2 cut(s)	132, 362
PspN4I	GGNNCC	4 cut(s)	229, 253, 414, 658
PspPI	GGNCC	3 cut(s)	136, 524, 657
PspPPI	RGGWCCY	2 cut(s)	136, 524
PsuI	RGATCY	1 cut(s)	666
RsaI	GTAC	1 cut(s)	861
RsaNI	GTAC	1 cut(s)	860
RseI	CAYNNNNRTG	2 cut(s)	707, 740
SapI	GCTCTTC	1 cut(s)	356
SaqAI	TTAA	1 cut(s)	314
SatI	GCNGC	8 cut(s)	152, 198, 201, 290, 347, 390, 900, 903
Sau3AI	GATC	1 cut(s)	666
Sau96I	GGNCC	3 cut(s)	136, 524, 657
SchI	GAGTC	2 cut(s)	587, 848
ScrFI	CCNGG	2 cut(s)	134, 364
SduI	GDGCHC	1 cut(s)	562
SfaNI	GCATC	2 cut(s)	124, 732
SfoI	GGCGCC	1 cut(s)	253
Sfr274I	CTCGAG	1 cut(s)	492
SinI	GGWCC	3 cut(s)	136, 524, 657
SlaI	CTCGAG	1 cut(s)	492
SmiMI	CAYNNNNRTG	2 cut(s)	707, 740
SmlI	CTYRAG	3 cut(s)	430, 492, 910
SmoI	CTYRAG	3 cut(s)	430, 492, 910
SpeI	ACTAGT	1 cut(s)	475
SphI	GCATGC	1 cut(s)	158
Sse9I	AATT	7 cut(s)	323, 369, 424, 650, 776, 781, 849
SsiI	CCGC	8 cut(s)	113, 152, 180, 186, 198, 201, 234, 389
SspDI	GGCGCC	1 cut(s)	251
SspMI	CTAG	2 cut(s)	476, 863
StyD4I	CCNGG	2 cut(s)	132, 362
StyI	CCWWGG	1 cut(s)	600
TaaI	ACNGT	3 cut(s)	146, 409, 796
TaiI	ACGT	2 cut(s)	66, 130
TaqI	TCGA	3 cut(s)	276, 493, 789
TasI	AATT	7 cut(s)	323, 369, 424, 650, 776, 781, 849
TatI	WGTACW	1 cut(s)	859
TauI	GCSGC	4 cut(s)	154, 200, 203, 392
Tru1I	TTAA	1 cut(s)	314
Tru9I	TTAA	1 cut(s)	314
TscAI	CASTG	1 cut(s)	412
TseFI	GTSAC	2 cut(s)	460, 487
TseI	GCWGC	4 cut(s)	289, 346, 899, 902
Tsp45I	GTSAC	2 cut(s)	460, 487
TspDTI	ATGAA	3 cut(s)	343, 434, 483
TspRI	CASTG	1 cut(s)	412
VpaK11BI	GGWCC	3 cut(s)	136, 524, 657
XagI	CCTNNNNNAGG	1 cut(s)	215
XapI	RAATTY	1 cut(s)	650
XceI	RCATGY	1 cut(s)	158
XhoI	CTCGAG	1 cut(s)	492
XspI	CTAG	2 cut(s)	476, 863

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.