Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013327

Physical Location & Seq

Genomic Coordinates Forward (+)

19083029 .. 19085819

Gene Structure 2791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G132600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGAGAAAGAGGAAGTTAATTATGGACCGCTGGCGTGGAGTTCTAAAGGTCCCATTGAACCCTAGTGCCAGTTCCTGCTACCGAGTTGCAGCATCTCTTTGCCTTTCACGTACTTCCAAAACACTAACTGTTCCTTCAGCAAATGCTATCTTTTTCAATGGAGATCGAGTATCAGGCACTGGGAATCCAGTGATTGAGAGGCTATCTGACATACAAAATATAGCTGAAATACTGGTCTCGAAGATTGGTGATTCAACCAATGCTTGGGTTATTGATGCTTCTGTTTTCAATGGGCCTTTTGCTGTGTATCATGACTTTGTCCCATCGGCTAATCAATGGGGAGAGCCGAAGTCATACTGCCCTGTTGGATCTCCAGCTTTTGGGTCAATTATTTCGCTCTTATCAAGTTGCCTTCAACAGGTCAAGAATGACATTGCGCGAGGGAAAGAATTGCTTAAACCAGGAATATCCGCATCACATTTTGATCTACCTAAAACATTATTCTTTGGATTCAGCAAGGGTGGCACTGTACTTAACCAGCTAGTTACTGAGCTTGGCTTCTCAGATGTTAAACCCTCTGGAGATCCACCAATCTTGGAGGAAAAGGAAATTGGTGTCGAAGACGAGATTCATATCATACCTAGAACAAAACAAAGCCTGTTAAACAGCATCAGAGAAATTCATTACGTGGATGTTGGATTAAATTCCCCTGGTGCATATATCACTGACCATAGCATGATTGAGAAAATCCCCAAATGCCTAATGCAAGGGGCTAGAGGAATCAGTTTTGTCCTTCATGGAACTCCCAGGCAATGGTGTGACAGCAGACGACCTTGGATACGCAAAGAAAAAGACAAATTGGTTCATCTGCTGGAGTCCGAATCTCAGAGAAGTGGAGGAAAATTACAGGTGTTTGAGAAATTTTATTTTGCTGATAGGCCCCCGGATTTGCAGATGCATTTTGAAGTAATTGATAAATTGGATTTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UPF0565

Protein Analysis

331

Amino Acids

36.68

Weight (kDa)

8.65

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013327)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44850 AT2G44850 AT2G44850
fragaria_vesca	FvH4_7g09990
malus_domestica	MD07G1104800.v1.1
prunus_persica	Prupe.2G132600_v2.0.a1 Prupe.2G132600_v2.0.a1
pyrus_communis	pycom07g08990
rosa_chinensis	RchiOBHm_Chr1g0347591
rosa_laevigata	RLG00000028735
rosa_multiflora	Rmu_sc0010621.1_g000015 Rmu_sc0021384.1_g000001
rosa_roxburghii	Rroxscaffold_4G00307630
rosa_rugosa	Rorug01G0188100
rosa_samantha	Rh1CG190000 Rh1DG201000
rosa_wichuraiana	Rw0G013660 Rw1G017230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	264, 380, 813
AccII	CGCG	1 cut(s)	439
AciI	CCGC	2 cut(s)	28, 471
AclWI	GGATC	2 cut(s)	376, 578
AcsI	RAATTY	3 cut(s)	678, 703, 920
AcuI	CTGAAG	1 cut(s)	120
AfaI	GTAC	2 cut(s)	112, 531
AfiI	CCNNNNNNNGG	4 cut(s)	264, 380, 418, 813
AgsI	TTSAA	6 cut(s)	58, 157, 255, 289, 416, 965
AjnI	CCWGG	3 cut(s)	460, 709, 806
AjuI	GAANNNNNNNTTGG	2 cut(s)	594, 626
AluBI	AGCT	4 cut(s)	224, 377, 541, 553
AluI	AGCT	4 cut(s)	224, 377, 541, 553
Alw26I	GTCTC	1 cut(s)	241
AlwI	GGATC	2 cut(s)	376, 578
AlwNI	CAGNNNCTG	2 cut(s)	75, 179
AoxI	GGCC	2 cut(s)	293, 938
ApeKI	GCWGC	1 cut(s)	89
ApoI	RAATTY	3 cut(s)	678, 703, 920
AspLEI	GCGC	1 cut(s)	439
AspS9I	GGNCC	4 cut(s)	25, 49, 293, 939
AsuC2I	CCSGG	1 cut(s)	944
AsuHPI	GGTGA	1 cut(s)	260
AvaII	GGWCC	2 cut(s)	25, 49
BbsI	GAAGAC	1 cut(s)	627
BbvI	GCAGC	1 cut(s)	101
BccI	CCATC	1 cut(s)	331
BciT130I	CCWGG	3 cut(s)	462, 711, 808
BciVI	GTATCC	1 cut(s)	831
BcnI	CCSGG	1 cut(s)	944
BcoDI	GTCTC	1 cut(s)	241
BfaI	CTAG	4 cut(s)	63, 542, 642, 774
BfuI	GTATCC	1 cut(s)	831
BisI	GCNGC	1 cut(s)	90
BlsI	GCNGC	1 cut(s)	91
Bme1390I	CCNGG	4 cut(s)	462, 711, 808, 944
Bme18I	GGWCC	2 cut(s)	25, 49
BmgT120I	GGNCC	4 cut(s)	25, 49, 293, 939
BmiI	GGNNCC	2 cut(s)	51, 941
BmrFI	CCNGG	4 cut(s)	462, 711, 808, 944
BmrI	ACTGGG	1 cut(s)	189
BmsI	GCATC	5 cut(s)	101, 265, 482, 678, 945
BmuI	ACTGGG	1 cut(s)	189
BpiI	GAAGAC	1 cut(s)	627
BpmI	CTGGAG	3 cut(s)	357, 600, 893
BpuMI	CCSGG	1 cut(s)	944
BsaAI	YACGTR	2 cut(s)	110, 688
BsaBI	GATNNNNATC	1 cut(s)	632
BsaI	GGTCTC	1 cut(s)	241
BsaJI	CCNNGG	4 cut(s)	709, 806, 833, 942
BsaXI	ACNNNNNCTCC	2 cut(s)	153, 183
Bsc4I	CCNNNNNNNGG	4 cut(s)	264, 380, 418, 813
Bse1I	ACTGG	4 cut(s)	69, 184, 188, 237
Bse3DI	GCAATG	2 cut(s)	432, 818
Bse8I	GATNNNNATC	1 cut(s)	632
BseBI	CCWGG	3 cut(s)	462, 711, 808
BseDI	CCNNGG	4 cut(s)	709, 806, 833, 942
BseGI	GGATG	1 cut(s)	697
BseJI	GATNNNNATC	1 cut(s)	632
BseLI	CCNNNNNNNGG	4 cut(s)	264, 380, 418, 813
BseMI	GCAATG	2 cut(s)	432, 818
BseMII	CTCAG	3 cut(s)	540, 576, 899
BseNI	ACTGG	4 cut(s)	69, 184, 188, 237
BseXI	GCAGC	1 cut(s)	101
Bsh1236I	CGCG	1 cut(s)	439
BshFI	GGCC	2 cut(s)	295, 940
BsiSI	CCGG	1 cut(s)	944
BslFI	GGGAC	2 cut(s)	35, 305
BslI	CCNNNNNNNGG	4 cut(s)	264, 380, 418, 813
BsmAI	GTCTC	1 cut(s)	241
BsmFI	GGGAC	2 cut(s)	35, 305
BsnI	GGCC	2 cut(s)	295, 940
Bso31I	GGTCTC	1 cut(s)	241
Bsp143I	GATC	4 cut(s)	163, 368, 484, 583
BspACI	CCGC	2 cut(s)	28, 471
BspANI	GGCC	2 cut(s)	295, 940
BspCNI	CTCAG	3 cut(s)	541, 575, 898
BspFNI	CGCG	1 cut(s)	439
BspHI	TCATGA	1 cut(s)	310
BspLI	GGNNCC	2 cut(s)	51, 941
BspPI	GGATC	2 cut(s)	376, 578
BspTNI	GGTCTC	1 cut(s)	241
BsrDI	GCAATG	2 cut(s)	432, 818
BsrI	ACTGG	4 cut(s)	69, 184, 188, 237
BssECI	CCNNGG	4 cut(s)	709, 806, 833, 942
BssMI	GATC	4 cut(s)	163, 368, 484, 583
BssT1I	CCWWGG	1 cut(s)	833
Bst2UI	CCWGG	3 cut(s)	462, 711, 808
Bst4CI	ACNGT	2 cut(s)	130, 529
BstBAI	YACGTR	2 cut(s)	110, 688
BstC8I	GCNNGC	1 cut(s)	32
BstDEI	CTNAG	3 cut(s)	549, 562, 885
BstENI	CCTNNNNNAGG	1 cut(s)	416
BstF5I	GGATG	1 cut(s)	697
BstFNI	CGCG	1 cut(s)	439
BstHHI	GCGC	1 cut(s)	439
BstKTI	GATC	4 cut(s)	166, 371, 487, 586
BstMAI	GTCTC	1 cut(s)	241
BstMBI	GATC	4 cut(s)	163, 368, 484, 583
BstMWI	GCNNNNNNNGC	1 cut(s)	522
BstNI	CCWGG	3 cut(s)	462, 711, 808
BstSCI	CCNGG	4 cut(s)	460, 709, 806, 942
BstUI	CGCG	1 cut(s)	439
BstV1I	GCAGC	1 cut(s)	101
BstV2I	GAAGAC	1 cut(s)	627
BstX2I	RGATCY	2 cut(s)	368, 583
BstYI	RGATCY	2 cut(s)	368, 583
BsuI	GTATCC	1 cut(s)	831
BsuRI	GGCC	2 cut(s)	295, 940
BtsCI	GGATG	1 cut(s)	697
BtsIMutI	CAGTG	4 cut(s)	177, 195, 525, 723
Cac8I	GCNNGC	1 cut(s)	32
CaiI	CAGNNNCTG	2 cut(s)	75, 179
CciI	TCATGA	1 cut(s)	310
CfoI	GCGC	1 cut(s)	439
Cfr13I	GGNCC	4 cut(s)	25, 49, 293, 939
Csp6I	GTAC	2 cut(s)	111, 530
CspCI	CAANNNNNGTGG	2 cut(s)	576, 611
CviAII	CATG	3 cut(s)	311, 736, 797
CviQI	GTAC	2 cut(s)	111, 530
DdeI	CTNAG	3 cut(s)	549, 562, 885
DpnI	GATC	4 cut(s)	165, 370, 486, 585
DpnII	GATC	4 cut(s)	163, 368, 484, 583
Eco130I	CCWWGG	1 cut(s)	833
Eco31I	GGTCTC	1 cut(s)	241
Eco47I	GGWCC	2 cut(s)	25, 49
Eco57I	CTGAAG	1 cut(s)	120
EcoNI	CCTNNNNNAGG	1 cut(s)	416
EcoO109I	RGGNCCY	2 cut(s)	49, 939
EcoRII	CCWGG	3 cut(s)	460, 709, 806
EcoT14I	CCWWGG	1 cut(s)	833
EcoT22I	ATGCAT	1 cut(s)	960
ErhI	CCWWGG	1 cut(s)	833
FaeI	CATG	3 cut(s)	314, 739, 800
FalI	AAGNNNNNCTT	2 cut(s)	438, 470
FaqI	GGGAC	2 cut(s)	35, 305
FatI	CATG	3 cut(s)	310, 735, 796
Fnu4HI	GCNGC	1 cut(s)	90
FokI	GGATG	1 cut(s)	704
Fsp4HI	GCNGC	1 cut(s)	90
FspBI	CTAG	4 cut(s)	63, 542, 642, 774
GlaI	GCGC	1 cut(s)	438
GluI	GCNGC	1 cut(s)	90
GsuI	CTGGAG	3 cut(s)	357, 600, 893
HaeIII	GGCC	2 cut(s)	295, 940
HapII	CCGG	1 cut(s)	944
HhaI	GCGC	1 cut(s)	439
Hin1II	CATG	3 cut(s)	314, 739, 800
Hin6I	GCGC	1 cut(s)	437
HinP1I	GCGC	1 cut(s)	437
HinfI	GANTC	7 cut(s)	184, 251, 510, 628, 780, 875, 881
HpaII	CCGG	1 cut(s)	944
HphI	GGTGA	1 cut(s)	260
Hpy188I	TCNGA	5 cut(s)	208, 565, 674, 880, 888
Hpy188III	TCNNGA	4 cut(s)	238, 311, 424, 579
HpyAV	CCTTC	3 cut(s)	144, 422, 803
HpyCH4III	ACNGT	2 cut(s)	130, 529
HpyCH4IV	ACGT	2 cut(s)	109, 687
HpyCH4V	TGCA	5 cut(s)	89, 716, 766, 952, 958
HpyF10VI	GCNNNNNNNGC	1 cut(s)	522
HpyF3I	CTNAG	3 cut(s)	549, 562, 885
HpySE526I	ACGT	2 cut(s)	109, 687
Hsp92II	CATG	3 cut(s)	314, 739, 800
HspAI	GCGC	1 cut(s)	437
Kzo9I	GATC	4 cut(s)	163, 368, 484, 583
Lsp1109I	GCAGC	1 cut(s)	101
LweI	GCATC	5 cut(s)	101, 265, 482, 678, 945
MaeI	CTAG	4 cut(s)	63, 542, 642, 774
MaeII	ACGT	2 cut(s)	109, 687
MaeIII	GTNAC	2 cut(s)	544, 818
MalI	GATC	4 cut(s)	165, 370, 486, 585
MboI	GATC	4 cut(s)	163, 368, 484, 583
MboII	GAAGA	2 cut(s)	253, 632
MflI	RGATCY	2 cut(s)	368, 583
MlyI	GAGTC	1 cut(s)	884
MmeI	TCCRAC	2 cut(s)	346, 676
MnlI	CCTC	7 cut(s)	3, 192, 434, 586, 592, 770, 890
Mph1103I	ATGCAT	1 cut(s)	960
MseI	TTAA	7 cut(s)	17, 456, 534, 570, 662, 701, 991
MspA1I	CMGCKG	1 cut(s)	30
MspI	CCGG	1 cut(s)	944
MspR9I	CCNGG	4 cut(s)	462, 711, 808, 944
MvaI	CCWGG	3 cut(s)	462, 711, 808
MvnI	CGCG	1 cut(s)	439
MwoI	GCNNNNNNNGC	1 cut(s)	522
NciI	CCSGG	1 cut(s)	944
NdeII	GATC	4 cut(s)	163, 368, 484, 583
NlaIII	CATG	3 cut(s)	314, 739, 800
NlaIV	GGNNCC	2 cut(s)	51, 941
NmuCI	GTSAC	1 cut(s)	818
NsiI	ATGCAT	1 cut(s)	960
PagI	TCATGA	1 cut(s)	310
PfeI	GAWTC	6 cut(s)	184, 251, 510, 628, 780, 881
PflFI	GACNNNGTC	1 cut(s)	317
PflMI	CCANNNNNTGG	3 cut(s)	264, 380, 813
PkrI	GCNGC	1 cut(s)	91
PleI	GAGTC	1 cut(s)	883
PpsI	GAGTC	1 cut(s)	883
Ppu21I	YACGTR	2 cut(s)	110, 688
PpuMI	RGGWCCY	1 cut(s)	49
Psp5II	RGGWCCY	1 cut(s)	49
Psp6I	CCWGG	3 cut(s)	460, 709, 806
PspGI	CCWGG	3 cut(s)	460, 709, 806
PspN4I	GGNNCC	2 cut(s)	51, 941
PspPI	GGNCC	4 cut(s)	25, 49, 293, 939
PspPPI	RGGWCCY	1 cut(s)	49
PstNI	CAGNNNCTG	2 cut(s)	75, 179
PsuI	RGATCY	2 cut(s)	368, 583
PsyI	GACNNNGTC	1 cut(s)	317
RsaI	GTAC	2 cut(s)	112, 531
RsaNI	GTAC	2 cut(s)	111, 530
SaqAI	TTAA	7 cut(s)	17, 456, 534, 570, 662, 701, 991
SatI	GCNGC	1 cut(s)	90
Sau3AI	GATC	4 cut(s)	163, 368, 484, 583
Sau96I	GGNCC	4 cut(s)	25, 49, 293, 939
SchI	GAGTC	1 cut(s)	884
ScrFI	CCNGG	4 cut(s)	462, 711, 808, 944
SfaNI	GCATC	5 cut(s)	101, 265, 482, 678, 945
SinI	GGWCC	2 cut(s)	25, 49
SsiI	CCGC	2 cut(s)	28, 471
SspMI	CTAG	4 cut(s)	63, 542, 642, 774
StyD4I	CCNGG	4 cut(s)	460, 709, 806, 942
StyI	CCWWGG	1 cut(s)	833
TaaI	ACNGT	2 cut(s)	130, 529
TaiI	ACGT	2 cut(s)	112, 690
TaqI	TCGA	3 cut(s)	166, 239, 618
TatI	WGTACW	1 cut(s)	529
TfiI	GAWTC	6 cut(s)	184, 251, 510, 628, 780, 881
Tru1I	TTAA	7 cut(s)	17, 456, 534, 570, 662, 701, 991
Tru9I	TTAA	7 cut(s)	17, 456, 534, 570, 662, 701, 991
TscAI	CASTG	4 cut(s)	184, 195, 532, 730
TseFI	GTSAC	1 cut(s)	818
TseI	GCWGC	1 cut(s)	89
Tsp45I	GTSAC	1 cut(s)	818
TspDTI	ATGAA	4 cut(s)	620, 671, 785, 854
TspRI	CASTG	4 cut(s)	184, 195, 532, 730
Tth111I	GACNNNGTC	1 cut(s)	317
Van91I	CCANNNNNTGG	3 cut(s)	264, 380, 813
VpaK11BI	GGWCC	2 cut(s)	25, 49
XagI	CCTNNNNNAGG	1 cut(s)	416
XapI	RAATTY	3 cut(s)	678, 703, 920
XspI	CTAG	4 cut(s)	63, 542, 642, 774
Zsp2I	ATGCAT	1 cut(s)	960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.