Prupe.2G152600_v2.0.a1
TCP Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
20715745 .. 20716635
891 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G152600.1

Sequence Viewer

Length: 891 bp
ATGACCATGACTGAGAAACGAGAACTTGAACCAGACCAAGCCACACCGTCCGTCGATCTCAGAATCAACGGCGGAGAAGAATCCGACTCAGAAGAGCCCGCCGGCCCATCCCAAGCTCTCATGCTTGCGCCCAAGGACGAGCGGGACGTAGCTATGCCTGTGGCGGTGCACGCGCCGAAGAGAGCGTCAACGAAGGACCGGCACACCAAAGTGGAGGGACGGGGCCGGAGGATCCGAATGCCCGCCACGTGCGCGGCTCGGATCTTCCAGCTGACCCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGCTCTTGGAGCACGCCGAGCCGGCCATCATCGCCGCCACCGGCACCGGAACCGTGCCTGCGATCGCGATGTCCGTGAACGGGGCGCTCAAAATCCCCACGTCCGCTCCGGACCCGCGACCCGGCGAGGACCCGCCCGACAAGAAAAAGCGCAAGCGGAACTCAAACAGCGAGTACGTGGACTTGAACGACGGCGTTTCGGCCTCGGCGGGTTTAGCCCCTTTAACAACAGAACGACATCACCAACAGCCACCGACAGCAGCGGTGCAAGCGGTGGTACCTCAAGGCGTGCTCCCCATGTGGGCCATACCGTCAAACGGCGTCGTTCCCGGAGCTTTCTTCATGGTCCCTTCCGCTTCGACCCAGCCTCACATATTTACATTTCCAACCACCGTCGCCGCCGCTCCGTTTATCAACATTTCGGCCCGACCCATATCCTCTTTCGTGGGCCCCAGTTCGGCTGCTGCAACGACCCATATGGCCGCTTCCACTGCCCCTCAGACGCTCAGAGACTTCTCTTTGGAAATTTACGACAAGAAGGAGCTTCAATTCATGTCTGGCTCTTCAAACCATTGA

Protein Analysis

297

Amino Acids

31.62

Weight (kDa)

6.77

Isoelectric Point (pI)

56.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015863)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45680
fragaria_vesca FvH4_7g12810
malus_domestica MD02G1196100.v1.1
prunus_persica Prupe.2G152600_v2.0.a1
pyrus_communis pycom02g15980
rosa_chinensis RchiOBHm_Chr1g0351841
rosa_laevigata RLG00000028378
rosa_multiflora Rmu_co8473567.1_g000001 Rmu_sc0001933.1_g000007
rosa_rugosa Rorug01G0222200
rosa_samantha Rh1AG236100 Rh1BG206600 Rh1CG220600 Rh1DG233600
rosa_wichuraiana Rw1G020550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 592
AccB1I GGYRCC 2 cut(s) 359, 592
AccB7I CCANNNNNTGG 1 cut(s) 315
AccBSI CCGCTC 3 cut(s) 142, 422, 719
AccII CGCG 4 cut(s) 173, 254, 383, 433
AccIII TCCGGA 1 cut(s) 424
AclWI GGATC 3 cut(s) 226, 239, 269
AcoI YGGCCR 2 cut(s) 339, 795
AcsI RAATTY 1 cut(s) 840
AcvI CACGTG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 636
AfaI GTAC 2 cut(s) 491, 594
AfiI CCNNNNNNNGG 6 cut(s) 315, 396, 437, 616, 632, 772
AgsI TTSAA 4 cut(s) 29, 502, 863, 882
AjiI CACGTC 1 cut(s) 417
AleI CACNNNNGTG 1 cut(s) 209
AluBI AGCT 6 cut(s) 116, 152, 271, 283, 650, 859
AluI AGCT 6 cut(s) 116, 152, 271, 283, 650, 859
Alw21I GWGCWC 3 cut(s) 171, 330, 609
Alw26I GTCTC 2 cut(s) 299, 819
Alw44I GTGCAC 1 cut(s) 167
AlwI GGATC 3 cut(s) 226, 239, 269
Ama87I CYCGRG 1 cut(s) 276
Aor13HI TCCGGA 1 cut(s) 424
AoxI GGCC 8 cut(s) 103, 223, 339, 516, 618, 738, 763, 795
ApaI GGGCCC 1 cut(s) 767
ApaLI GTGCAC 1 cut(s) 167
ApeKI GCWGC 3 cut(s) 575, 776, 779
ApoI RAATTY 1 cut(s) 840
ArsI GACNNNNNNTTYG 2 cut(s) 170, 202
AsiSI GCGATCGC 1 cut(s) 381
Asp718I GGTACC 1 cut(s) 592
AspLEI GCGC 5 cut(s) 130, 175, 254, 403, 468
AsuC2I CCSGG 4 cut(s) 277, 278, 438, 645
AsuHPI GGTGA 1 cut(s) 548
AvaI CYCGRG 1 cut(s) 276
AvaII GGWCC 4 cut(s) 196, 427, 445, 661
BaeGI GKGCMC 3 cut(s) 171, 291, 767
BamHI GGATCC 1 cut(s) 231
BanI GGYRCC 2 cut(s) 359, 592
BanII GRGCYC 2 cut(s) 99, 767
BbrPI CACGTG 1 cut(s) 249
Bbv12I GWGCWC 3 cut(s) 171, 330, 609
BbvI GCAGC 3 cut(s) 587, 763, 766
BccI CCATC 3 cut(s) 115, 317, 350
BceAI ACGGC 4 cut(s) 85, 316, 523, 649
BcnI CCSGG 4 cut(s) 277, 278, 438, 645
BcoDI GTCTC 2 cut(s) 299, 819
BfaI CTAG 1 cut(s) 284
BfoI RGCGCY 1 cut(s) 404
BglI GCCNNNNNGGC 1 cut(s) 338
BisI GCNGC 8 cut(s) 255, 351, 576, 714, 717, 777, 780, 798
BlsI GCNGC 8 cut(s) 256, 352, 577, 715, 718, 778, 781, 799
Bme1390I CCNGG 4 cut(s) 277, 278, 438, 645
Bme18I GGWCC 4 cut(s) 196, 427, 445, 661
BmeT110I CYCGRG 1 cut(s) 276
BmgBI CACGTC 1 cut(s) 417
BmrFI CCNGG 4 cut(s) 277, 278, 438, 645
BmrI ACTGGG 1 cut(s) 762
BmuI ACTGGG 1 cut(s) 762
BpuEI CTTGAG 1 cut(s) 582
BpuMI CCSGG 4 cut(s) 277, 278, 438, 645
BsaAI YACGTR 2 cut(s) 249, 493
BsaHI GRCGYC 1 cut(s) 636
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 3 cut(s) 132, 276, 519
BsaWI WCCGGW 3 cut(s) 312, 362, 424
BsaXI ACNNNNNCTCC 2 cut(s) 406, 436
Bsc4I CCNNNNNNNGG 6 cut(s) 315, 396, 437, 616, 632, 772
Bse118I RCCGGY 4 cut(s) 101, 198, 337, 356
Bse1I ACTGG 1 cut(s) 768
BseAI TCCGGA 1 cut(s) 424
BseDI CCNNGG 3 cut(s) 132, 276, 519
BseGI GGATG 2 cut(s) 107, 309
BseLI CCNNNNNNNGG 6 cut(s) 315, 396, 437, 616, 632, 772
BseMII CTCAG 4 cut(s) 73, 102, 827, 835
BseNI ACTGG 1 cut(s) 768
BseSI GKGCMC 3 cut(s) 171, 291, 767
BseXI GCAGC 3 cut(s) 587, 763, 766
BseYI CCCAGC 1 cut(s) 678
Bsh1236I CGCG 4 cut(s) 173, 254, 383, 433
Bsh1285I CGRYCG 1 cut(s) 381
BshFI GGCC 8 cut(s) 105, 225, 341, 518, 620, 740, 765, 797
BshNI GGYRCC 2 cut(s) 359, 592
BsiEI CGRYCG 1 cut(s) 381
BsiHKAI GWGCWC 3 cut(s) 171, 330, 609
BsiHKCI CYCGRG 1 cut(s) 276
BslFI GGGAC 3 cut(s) 158, 231, 647
BslI CCNNNNNNNGG 6 cut(s) 315, 396, 437, 616, 632, 772
BsmAI GTCTC 2 cut(s) 299, 819
BsmFI GGGAC 3 cut(s) 158, 231, 647
BsmI GAATGC 1 cut(s) 243
BsnI GGCC 8 cut(s) 105, 225, 341, 518, 620, 740, 765, 797
Bso31I GGTCTC 1 cut(s) 299
BsoBI CYCGRG 1 cut(s) 276
Bsp120I GGGCCC 1 cut(s) 763
Bsp1286I GDGCHC 6 cut(s) 99, 171, 291, 330, 609, 767
Bsp13I TCCGGA 1 cut(s) 424
Bsp143I GATC 4 cut(s) 55, 231, 261, 378
Bsp68I TCGCGA 1 cut(s) 383
BspANI GGCC 8 cut(s) 105, 225, 341, 518, 620, 740, 765, 797
BspCNI CTCAG 5 cut(s) 4, 72, 101, 826, 834
BspEI TCCGGA 1 cut(s) 424
BspFNI CGCG 4 cut(s) 173, 254, 383, 433
BspPI GGATC 3 cut(s) 226, 239, 269
BspQI GCTCTTC 2 cut(s) 87, 883
BspT107I GGYRCC 2 cut(s) 359, 592
BspTNI GGTCTC 1 cut(s) 299
BsrBI CCGCTC 3 cut(s) 142, 422, 719
BsrFI RCCGGY 4 cut(s) 101, 198, 337, 356
BsrI ACTGG 1 cut(s) 768
BssAI RCCGGY 4 cut(s) 101, 198, 337, 356
BssECI CCNNGG 3 cut(s) 132, 276, 519
BssMI GATC 4 cut(s) 55, 231, 261, 378
BssNI GRCGYC 1 cut(s) 636
BssT1I CCWWGG 1 cut(s) 132
Bst4CI ACNGT 4 cut(s) 48, 370, 627, 709
Bst6I CTCTTC 3 cut(s) 87, 173, 883
BstACI GRCGYC 1 cut(s) 636
BstBAI YACGTR 2 cut(s) 249, 493
BstDEI CTNAG 5 cut(s) 12, 59, 88, 813, 821
BstF5I GGATG 2 cut(s) 107, 309
BstFNI CGCG 4 cut(s) 173, 254, 383, 433
BstH2I RGCGCY 1 cut(s) 404
BstHHI GCGC 5 cut(s) 130, 175, 254, 403, 468
BstKTI GATC 4 cut(s) 58, 234, 264, 381
BstMAI GTCTC 2 cut(s) 299, 819
BstMBI GATC 4 cut(s) 55, 231, 261, 378
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 9 cut(s) 170, 251, 325, 334, 338, 347, 530, 584, 806
BstSCI CCNGG 4 cut(s) 275, 276, 436, 643
BstSLI GKGCMC 3 cut(s) 171, 291, 767
BstUI CGCG 4 cut(s) 173, 254, 383, 433
BstV1I GCAGC 3 cut(s) 587, 763, 766
BstX2I RGATCY 2 cut(s) 231, 261
BstYI RGATCY 2 cut(s) 231, 261
BsuRI GGCC 8 cut(s) 105, 225, 341, 518, 620, 740, 765, 797
BtgZI GCGATG 2 cut(s) 331, 398
BtrI CACGTC 1 cut(s) 417
BtsCI GGATG 2 cut(s) 107, 309
BtsI GCAGTG 1 cut(s) 804
BtsIMutI CAGTG 1 cut(s) 804
BtuMI TCGCGA 1 cut(s) 383
CfoI GCGC 5 cut(s) 130, 175, 254, 403, 468
Cfr10I RCCGGY 4 cut(s) 101, 198, 337, 356
Cfr9I CCCGGG 1 cut(s) 276
CseI GACGC 3 cut(s) 174, 625, 826
Csp6I GTAC 2 cut(s) 490, 593
CviAII CATG 5 cut(s) 7, 121, 613, 658, 868
CviQI GTAC 2 cut(s) 490, 593
DdeI CTNAG 5 cut(s) 12, 59, 88, 813, 821
DpnI GATC 4 cut(s) 57, 233, 263, 380
DpnII GATC 4 cut(s) 55, 231, 261, 378
EaeI YGGCCR 2 cut(s) 339, 795
Eam1104I CTCTTC 3 cut(s) 87, 173, 883
EarI CTCTTC 3 cut(s) 87, 173, 883
EciI GGCGGA 1 cut(s) 87
Eco130I CCWWGG 1 cut(s) 132
Eco24I GRGCYC 2 cut(s) 99, 767
Eco31I GGTCTC 1 cut(s) 299
Eco47I GGWCC 4 cut(s) 196, 427, 445, 661
Eco72I CACGTG 1 cut(s) 249
Eco88I CYCGRG 1 cut(s) 276
EcoO109I RGGNCCY 2 cut(s) 445, 764
EcoT14I CCWWGG 1 cut(s) 132
EcoT38I GRGCYC 2 cut(s) 99, 767
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 5 cut(s) 10, 124, 616, 661, 871
FaqI GGGAC 3 cut(s) 158, 231, 647
FatI CATG 5 cut(s) 6, 120, 612, 657, 867
FauI CCCGC 6 cut(s) 106, 135, 250, 438, 456, 517
FauNDI CATATG 1 cut(s) 792
Fnu4HI GCNGC 8 cut(s) 255, 351, 576, 714, 717, 777, 780, 798
FokI GGATG 2 cut(s) 94, 296
FriOI GRGCYC 2 cut(s) 99, 767
Fsp4HI GCNGC 8 cut(s) 255, 351, 576, 714, 717, 777, 780, 798
FspBI CTAG 1 cut(s) 284
GlaI GCGC 5 cut(s) 129, 174, 253, 402, 467
GluI GCNGC 8 cut(s) 255, 351, 576, 714, 717, 777, 780, 798
GsaI CCCAGC 1 cut(s) 682
HaeII RGCGCY 1 cut(s) 404
HaeIII GGCC 8 cut(s) 105, 225, 341, 518, 620, 740, 765, 797
HgaI GACGC 3 cut(s) 174, 625, 826
HhaI GCGC 5 cut(s) 130, 175, 254, 403, 468
Hin1I GRCGYC 1 cut(s) 636
Hin1II CATG 5 cut(s) 10, 124, 616, 661, 871
Hin6I GCGC 5 cut(s) 128, 173, 252, 401, 466
HinP1I GCGC 5 cut(s) 128, 173, 252, 401, 466
HincII GTYRAC 1 cut(s) 189
HindII GTYRAC 1 cut(s) 189
HinfI GANTC 3 cut(s) 63, 80, 86
HphI GGTGA 1 cut(s) 548
Hpy166II GTNNAC 4 cut(s) 169, 189, 394, 496
Hpy188I TCNGA 8 cut(s) 62, 85, 91, 236, 261, 298, 816, 824
Hpy188III TCNNGA 2 cut(s) 382, 425
Hpy8I GTNNAC 4 cut(s) 169, 189, 394, 496
Hpy99I CGWCG 5 cut(s) 56, 302, 509, 641, 713
HpyAV CCTTC 3 cut(s) 187, 675, 847
HpyCH4III ACNGT 4 cut(s) 48, 370, 627, 709
HpyCH4IV ACGT 4 cut(s) 147, 248, 416, 492
HpyCH4V TGCA 3 cut(s) 169, 583, 782
HpyF10VI GCNNNNNNNGC 9 cut(s) 170, 251, 325, 334, 338, 347, 530, 584, 806
HpyF3I CTNAG 5 cut(s) 12, 59, 88, 813, 821
HpySE526I ACGT 4 cut(s) 147, 248, 416, 492
Hsp92I GRCGYC 1 cut(s) 636
Hsp92II CATG 5 cut(s) 10, 124, 616, 661, 871
HspAI GCGC 5 cut(s) 128, 173, 252, 401, 466
Kpn2I TCCGGA 1 cut(s) 424
KpnI GGTACC 1 cut(s) 596
KroI GCCGGC 2 cut(s) 101, 337
KroNI GCCGGC 2 cut(s) 103, 339
Kzo9I GATC 4 cut(s) 55, 231, 261, 378
LguI GCTCTTC 2 cut(s) 87, 883
LmnI GCTCC 7 cut(s) 280, 325, 427, 612, 647, 724, 856
Lsp1109I GCAGC 3 cut(s) 587, 763, 766
MaeI CTAG 1 cut(s) 284
MaeII ACGT 4 cut(s) 147, 248, 416, 492
MalI GATC 4 cut(s) 57, 233, 263, 380
MbiI CCGCTC 3 cut(s) 142, 422, 719
MboI GATC 4 cut(s) 55, 231, 261, 378
MboII GAAGA 6 cut(s) 89, 104, 190, 256, 646, 870
MflI RGATCY 2 cut(s) 231, 261
MhlI GDGCHC 6 cut(s) 99, 171, 291, 330, 609, 767
MluCI AATT 2 cut(s) 840, 863
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 3 cut(s) 108, 321, 725
MnlI CCTC 8 cut(s) 208, 222, 436, 529, 606, 693, 763, 822
MroI TCCGGA 1 cut(s) 424
MroNI GCCGGC 2 cut(s) 101, 337
MseI TTAA 1 cut(s) 539
MslI CAYNNNNRTG 1 cut(s) 209
MspA1I CMGCKG 2 cut(s) 271, 578
MspR9I CCNGG 4 cut(s) 277, 278, 438, 645
Mva1269I GAATGC 1 cut(s) 243
MvnI CGCG 4 cut(s) 173, 254, 383, 433
MwoI GCNNNNNNNGC 9 cut(s) 170, 251, 325, 334, 338, 347, 530, 584, 806
NaeI GCCGGC 2 cut(s) 103, 339
NciI CCSGG 4 cut(s) 277, 278, 438, 645
NdeI CATATG 1 cut(s) 792
NdeII GATC 4 cut(s) 55, 231, 261, 378
NgoMIV GCCGGC 2 cut(s) 101, 337
NlaIII CATG 5 cut(s) 10, 124, 616, 661, 871
NmeAIII GCCGAG 2 cut(s) 358, 500
NruI TCGCGA 1 cut(s) 383
OliI CACNNNNGTG 1 cut(s) 209
PciSI GCTCTTC 2 cut(s) 87, 883
PcsI WCGNNNNNNNCGW 2 cut(s) 144, 387
PctI GAATGC 1 cut(s) 243
PdiI GCCGGC 2 cut(s) 103, 339
PfeI GAWTC 2 cut(s) 63, 80
PflMI CCANNNNNTGG 1 cut(s) 315
PfoI TCCNGGA 1 cut(s) 643
PkrI GCNGC 8 cut(s) 256, 352, 577, 715, 718, 778, 781, 799
Ple19I CGATCG 1 cut(s) 381
PleI GAGTC 1 cut(s) 80
PmaCI CACGTG 1 cut(s) 249
PmlI CACGTG 1 cut(s) 249
PpsI GAGTC 1 cut(s) 80
Ppu21I YACGTR 2 cut(s) 249, 493
PpuMI RGGWCCY 1 cut(s) 445
Psp5II RGGWCCY 1 cut(s) 445
PspCI CACGTG 1 cut(s) 249
PspFI CCCAGC 1 cut(s) 678
PspOMI GGGCCC 1 cut(s) 763
PspPPI RGGWCCY 1 cut(s) 445
PsuI RGATCY 2 cut(s) 231, 261
PvuI CGATCG 1 cut(s) 381
PvuII CAGCTG 1 cut(s) 271
RgaI GCGATCGC 1 cut(s) 381
RruI TCGCGA 1 cut(s) 383
RsaI GTAC 2 cut(s) 491, 594
RsaNI GTAC 2 cut(s) 490, 593
RseI CAYNNNNRTG 1 cut(s) 209
SapI GCTCTTC 2 cut(s) 87, 883
SaqAI TTAA 1 cut(s) 539
SatI GCNGC 8 cut(s) 255, 351, 576, 714, 717, 777, 780, 798
Sau3AI GATC 4 cut(s) 55, 231, 261, 378
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 4 cut(s) 277, 278, 438, 645
SduI GDGCHC 6 cut(s) 99, 171, 291, 330, 609, 767
SfaAI GCGATCGC 1 cut(s) 381
SgfI GCGATCGC 1 cut(s) 381
SinI GGWCC 4 cut(s) 196, 427, 445, 661
SmaI CCCGGG 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 1 cut(s) 597
SmoI CTYRAG 1 cut(s) 597
Sse9I AATT 2 cut(s) 840, 863
SspMI CTAG 1 cut(s) 284
StyD4I CCNGG 4 cut(s) 275, 276, 436, 643
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 4 cut(s) 48, 370, 627, 709
TaiI ACGT 4 cut(s) 150, 251, 419, 495
TaqI TCGA 2 cut(s) 54, 674
TasI AATT 2 cut(s) 840, 863
TauI GCSGC 5 cut(s) 257, 353, 716, 719, 800
TfiI GAWTC 2 cut(s) 63, 80
Tru1I TTAA 1 cut(s) 539
Tru9I TTAA 1 cut(s) 539
TscAI CASTG 1 cut(s) 811
TseI GCWGC 3 cut(s) 575, 776, 779
TspDTI ATGAA 2 cut(s) 646, 856
TspGWI ACGGA 3 cut(s) 40, 379, 711
TspMI CCCGGG 1 cut(s) 276
TspRI CASTG 1 cut(s) 811
Van91I CCANNNNNTGG 1 cut(s) 315
VneI GTGCAC 1 cut(s) 167
VpaK11BI GGWCC 4 cut(s) 196, 427, 445, 661
XapI RAATTY 1 cut(s) 840
XmaI CCCGGG 1 cut(s) 276
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.