Probable zinc-ribbon domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46380 AT2G46380 AT3G61670 AT3G61670 |
| fragaria_vesca | FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 |
| malus_domestica | MD01G1076900.v1.1 MD07G1146100.v1.1 MD07G1146300.v1.1 |
| prunus_persica | Prupe.2G184400_v2.0.a1 |
| pyrus_communis | pycom01g10600 pycom07g14570 |
| rosa_chinensis | RchiOBHm_Chr1g0359001 |
| rosa_laevigata | RLG00000027910 |
| rosa_multiflora | Rmu_sc0001176.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00297470 |
| rosa_rugosa | Rorug01G0267000 |
| rosa_samantha | Rh1AG280300 Rh1BG247400 Rh1CG264700 Rh1DG275800 |
| rosa_wichuraiana | Rw1G024920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 33 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1511, 2018 |
| AccBSI | CCGCTC | 1 cut(s) | 523 |
| AccII | CGCG | 1 cut(s) | 2143 |
| AccIII | TCCGGA | 1 cut(s) | 1939 |
| AciI | CCGC | 5 cut(s) | 523, 1492, 1611, 2390, 2423 |
| AclWI | GGATC | 8 cut(s) | 741, 806, 1019, 1029, 1032, 1042, 1127, 2400 |
| AcoI | YGGCCR | 2 cut(s) | 1415, 1489 |
| AcsI | RAATTY | 5 cut(s) | 1964, 1972, 2045, 2149, 2525 |
| AcuI | CTGAAG | 2 cut(s) | 837, 1203 |
| AcvI | CACGTG | 2 cut(s) | 1366, 2065 |
| AcyI | GRCGYC | 1 cut(s) | 1387 |
| AdeI | CACNNNGTG | 1 cut(s) | 1157 |
| AfaI | GTAC | 7 cut(s) | 328, 683, 881, 1575, 1738, 1918, 2204 |
| AflII | CTTAAG | 1 cut(s) | 2402 |
| AflIII | ACRYGT | 2 cut(s) | 898, 1365 |
| AgeI | ACCGGT | 1 cut(s) | 2696 |
| AjnI | CCWGG | 7 cut(s) | 841, 1012, 1070, 1303, 2017, 2437, 2491 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 156, 188 |
| Alw21I | GWGCWC | 1 cut(s) | 1522 |
| Alw26I | GTCTC | 2 cut(s) | 338, 2156 |
| AlwI | GGATC | 8 cut(s) | 741, 806, 1019, 1029, 1032, 1042, 1127, 2400 |
| Ama87I | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| Aor13HI | TCCGGA | 1 cut(s) | 1939 |
| AoxI | GGCC | 4 cut(s) | 1287, 1415, 1489, 2489 |
| ApeKI | GCWGC | 5 cut(s) | 1558, 1561, 1984, 2780, 2783 |
| ApoI | RAATTY | 5 cut(s) | 1964, 1972, 2045, 2149, 2525 |
| AseI | ATTAAT | 1 cut(s) | 2384 |
| AsiGI | ACCGGT | 1 cut(s) | 2696 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1216 |
| AspA2I | CCTAGG | 1 cut(s) | 1337 |
| AspS9I | GGNCC | 6 cut(s) | 593, 887, 1052, 1288, 1316, 2489 |
| AsuC2I | CCSGG | 2 cut(s) | 1765, 1766 |
| AsuHPI | GGTGA | 6 cut(s) | 524, 1160, 1753, 2016, 2588, 2711 |
| AsuNHI | GCTAGC | 1 cut(s) | 1477 |
| AvaI | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| AvaII | GGWCC | 4 cut(s) | 593, 887, 1052, 1316 |
| AvrII | CCTAGG | 1 cut(s) | 1337 |
| BaeGI | GKGCMC | 1 cut(s) | 38 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 234, 267 |
| BalI | TGGCCA | 1 cut(s) | 1417 |
| BamHI | GGATCC | 2 cut(s) | 1024, 1034 |
| BanI | GGYRCC | 1 cut(s) | 33 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 550, 582 |
| BbrPI | CACGTG | 2 cut(s) | 1366, 2065 |
| BbsI | GAAGAC | 3 cut(s) | 538, 558, 1493 |
| Bbv12I | GWGCWC | 1 cut(s) | 1522 |
| BbvI | GCAGC | 5 cut(s) | 1548, 1570, 1996, 2767, 2770 |
| BciT130I | CCWGG | 7 cut(s) | 843, 1014, 1072, 1305, 2019, 2439, 2493 |
| BciVI | GTATCC | 1 cut(s) | 133 |
| BclI | TGATCA | 1 cut(s) | 1324 |
| BcnI | CCSGG | 2 cut(s) | 1765, 1766 |
| BcoDI | GTCTC | 2 cut(s) | 338, 2156 |
| BfaI | CTAG | 7 cut(s) | 110, 891, 975, 1338, 1478, 2171, 2684 |
| BfmI | CTRYAG | 2 cut(s) | 1556, 2030 |
| BfrI | CTTAAG | 1 cut(s) | 2402 |
| BfuI | GTATCC | 1 cut(s) | 133 |
| BglII | AGATCT | 2 cut(s) | 2651, 2667 |
| BisI | GCNGC | 6 cut(s) | 1492, 1559, 1562, 1985, 2781, 2784 |
| BlnI | CCTAGG | 1 cut(s) | 1337 |
| BlpI | GCTNAGC | 1 cut(s) | 702 |
| BlsI | GCNGC | 6 cut(s) | 1493, 1560, 1563, 1986, 2782, 2785 |
| BmcAI | AGTACT | 4 cut(s) | 881, 1575, 1738, 2204 |
| Bme1390I | CCNGG | 9 cut(s) | 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493 |
| Bme18I | GGWCC | 4 cut(s) | 593, 887, 1052, 1316 |
| BmeT110I | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| BmgT120I | GGNCC | 6 cut(s) | 593, 887, 1052, 1288, 1316, 2489 |
| BmiI | GGNNCC | 6 cut(s) | 35, 594, 636, 804, 1026, 1036 |
| BmrFI | CCNGG | 9 cut(s) | 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493 |
| BmrI | ACTGGG | 1 cut(s) | 2223 |
| BmsI | GCATC | 3 cut(s) | 223, 1598, 1878 |
| BmtI | GCTAGC | 1 cut(s) | 1481 |
| BmuI | ACTGGG | 1 cut(s) | 2223 |
| BpiI | GAAGAC | 3 cut(s) | 538, 558, 1493 |
| BpmI | CTGGAG | 1 cut(s) | 792 |
| Bpu10I | CCTNAGC | 2 cut(s) | 728, 933 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 702 |
| BpuMI | CCSGG | 2 cut(s) | 1765, 1766 |
| Bsa29I | ATCGAT | 1 cut(s) | 1632 |
| BsaAI | YACGTR | 2 cut(s) | 1366, 2065 |
| BsaHI | GRCGYC | 1 cut(s) | 1387 |
| BsaJI | CCNNGG | 8 cut(s) | 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437 |
| BsaWI | WCCGGW | 2 cut(s) | 1939, 2696 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1415, 1445, 1990, 2020 |
| Bse118I | RCCGGY | 2 cut(s) | 744, 2696 |
| Bse1I | ACTGG | 5 cut(s) | 1226, 1482, 2218, 2572, 2622 |
| Bse3DI | GCAATG | 2 cut(s) | 415, 2368 |
| BseAI | TCCGGA | 1 cut(s) | 1939 |
| BseBI | CCWGG | 7 cut(s) | 843, 1014, 1072, 1305, 2019, 2439, 2493 |
| BseCI | ATCGAT | 1 cut(s) | 1632 |
| BseDI | CCNNGG | 8 cut(s) | 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437 |
| BseMI | GCAATG | 2 cut(s) | 415, 2368 |
| BseMII | CTCAG | 8 cut(s) | 24, 693, 924, 1060, 1914, 2118, 2169, 2558 |
| BseNI | ACTGG | 5 cut(s) | 1226, 1482, 2218, 2572, 2622 |
| BseRI | GAGGAG | 3 cut(s) | 192, 1047, 1998 |
| BseSI | GKGCMC | 1 cut(s) | 38 |
| BseXI | GCAGC | 5 cut(s) | 1548, 1570, 1996, 2767, 2770 |
| BseYI | CCCAGC | 1 cut(s) | 1290 |
| Bsh1236I | CGCG | 1 cut(s) | 2143 |
| BshFI | GGCC | 4 cut(s) | 1289, 1417, 1491, 2491 |
| BshNI | GGYRCC | 1 cut(s) | 33 |
| BshTI | ACCGGT | 1 cut(s) | 2696 |
| BshVI | ATCGAT | 1 cut(s) | 1632 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1522 |
| BsiHKCI | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| BsiSI | CCGG | 4 cut(s) | 745, 1765, 1940, 2697 |
| BslFI | GGGAC | 2 cut(s) | 20, 2249 |
| BsmAI | GTCTC | 2 cut(s) | 338, 2156 |
| BsmBI | CGTCTC | 1 cut(s) | 338 |
| BsmFI | GGGAC | 2 cut(s) | 20, 2249 |
| BsnI | GGCC | 4 cut(s) | 1289, 1417, 1491, 2491 |
| BsoBI | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| Bsp1286I | GDGCHC | 2 cut(s) | 38, 1522 |
| Bsp13I | TCCGGA | 1 cut(s) | 1939 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 702 |
| Bsp19I | CCATGG | 1 cut(s) | 1750 |
| Bsp68I | TCGCGA | 1 cut(s) | 2143 |
| BspACI | CCGC | 5 cut(s) | 523, 1492, 1611, 2390, 2423 |
| BspANI | GGCC | 4 cut(s) | 1289, 1417, 1491, 2491 |
| BspCNI | CTCAG | 8 cut(s) | 23, 694, 925, 1059, 1915, 2117, 2170, 2557 |
| BspDI | ATCGAT | 1 cut(s) | 1632 |
| BspEI | TCCGGA | 1 cut(s) | 1939 |
| BspFNI | CGCG | 1 cut(s) | 2143 |
| BspHI | TCATGA | 1 cut(s) | 1882 |
| BspLI | GGNNCC | 6 cut(s) | 35, 594, 636, 804, 1026, 1036 |
| BspMAI | CTGCAG | 1 cut(s) | 1560 |
| BspOI | GCTAGC | 1 cut(s) | 1481 |
| BspPI | GGATC | 8 cut(s) | 741, 806, 1019, 1029, 1032, 1042, 1127, 2400 |
| BspQI | GCTCTTC | 2 cut(s) | 1207, 2697 |
| BspT107I | GGYRCC | 1 cut(s) | 33 |
| BspTI | CTTAAG | 1 cut(s) | 2402 |
| BsrBI | CCGCTC | 1 cut(s) | 523 |
| BsrDI | GCAATG | 2 cut(s) | 415, 2368 |
| BsrFI | RCCGGY | 2 cut(s) | 744, 2696 |
| BsrI | ACTGG | 5 cut(s) | 1226, 1482, 2218, 2572, 2622 |
| BssAI | RCCGGY | 2 cut(s) | 744, 2696 |
| BssECI | CCNNGG | 8 cut(s) | 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437 |
| BssNI | GRCGYC | 1 cut(s) | 1387 |
| BssT1I | CCWWGG | 2 cut(s) | 1337, 1750 |
| Bst2UI | CCWGG | 7 cut(s) | 843, 1014, 1072, 1305, 2019, 2439, 2493 |
| Bst4CI | ACNGT | 9 cut(s) | 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737 |
| Bst6I | CTCTTC | 5 cut(s) | 415, 1207, 1789, 2581, 2697 |
| BstACI | GRCGYC | 1 cut(s) | 1387 |
| BstAFI | CTTAAG | 1 cut(s) | 2402 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1542 |
| BstBAI | YACGTR | 2 cut(s) | 1366, 2065 |
| BstC8I | GCNNGC | 6 cut(s) | 66, 336, 1479, 1877, 2723, 2727 |
| BstDSI | CCRYGG | 1 cut(s) | 1750 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1069, 2687 |
| BstFNI | CGCG | 1 cut(s) | 2143 |
| BstMAI | GTCTC | 2 cut(s) | 338, 2156 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 724, 866, 964, 1081, 1542, 1952 |
| BstNI | CCWGG | 7 cut(s) | 843, 1014, 1072, 1305, 2019, 2439, 2493 |
| BstNSI | RCATGY | 2 cut(s) | 902, 1536 |
| BstSCI | CCNGG | 9 cut(s) | 841, 1012, 1070, 1303, 1763, 1764, 2017, 2437, 2491 |
| BstSFI | CTRYAG | 2 cut(s) | 1556, 2030 |
| BstSLI | GKGCMC | 1 cut(s) | 38 |
| BstUI | CGCG | 1 cut(s) | 2143 |
| BstV1I | GCAGC | 5 cut(s) | 1548, 1570, 1996, 2767, 2770 |
| BstV2I | GAAGAC | 3 cut(s) | 538, 558, 1493 |
| BstX2I | RGATCY | 5 cut(s) | 811, 1024, 1034, 2651, 2667 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1013 |
| BstYI | RGATCY | 5 cut(s) | 811, 1024, 1034, 2651, 2667 |
| Bsu15I | ATCGAT | 1 cut(s) | 1632 |
| BsuI | GTATCC | 1 cut(s) | 133 |
| BsuRI | GGCC | 4 cut(s) | 1289, 1417, 1491, 2491 |
| BsuTUI | ATCGAT | 1 cut(s) | 1632 |
| BtgI | CCRYGG | 1 cut(s) | 1750 |
| BtgZI | GCGATG | 1 cut(s) | 1621 |
| BtsI | GCAGTG | 1 cut(s) | 1236 |
| BtsIMutI | CAGTG | 6 cut(s) | 92, 1054, 1227, 1236, 1489, 2211 |
| BtuMI | TCGCGA | 1 cut(s) | 2143 |
| Cac8I | GCNNGC | 6 cut(s) | 66, 336, 1479, 1877, 2723, 2727 |
| CciI | TCATGA | 1 cut(s) | 1882 |
| Cfr10I | RCCGGY | 2 cut(s) | 744, 2696 |
| Cfr13I | GGNCC | 6 cut(s) | 593, 887, 1052, 1288, 1316, 2489 |
| Cfr9I | CCCGGG | 1 cut(s) | 1764 |
| ClaI | ATCGAT | 1 cut(s) | 1632 |
| CseI | GACGC | 3 cut(s) | 839, 1395, 2246 |
| Csp6I | GTAC | 7 cut(s) | 327, 682, 880, 1574, 1737, 1917, 2203 |
| CspAI | ACCGGT | 1 cut(s) | 2696 |
| CviQI | GTAC | 7 cut(s) | 327, 682, 880, 1574, 1737, 1917, 2203 |
| DraIII | CACNNNGTG | 1 cut(s) | 1157 |
| EaeI | YGGCCR | 2 cut(s) | 1415, 1489 |
| Eam1104I | CTCTTC | 5 cut(s) | 415, 1207, 1789, 2581, 2697 |
| EarI | CTCTTC | 5 cut(s) | 415, 1207, 1789, 2581, 2697 |
| Eco130I | CCWWGG | 2 cut(s) | 1337, 1750 |
| Eco47I | GGWCC | 4 cut(s) | 593, 887, 1052, 1316 |
| Eco57I | CTGAAG | 2 cut(s) | 837, 1203 |
| Eco72I | CACGTG | 2 cut(s) | 1366, 2065 |
| Eco88I | CYCGRG | 4 cut(s) | 59, 284, 1764, 2671 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1069, 2687 |
| EcoRI | GAATTC | 3 cut(s) | 1964, 2045, 2525 |
| EcoRII | CCWGG | 7 cut(s) | 841, 1012, 1070, 1303, 2017, 2437, 2491 |
| EcoT14I | CCWWGG | 2 cut(s) | 1337, 1750 |
| EcoT22I | ATGCAT | 2 cut(s) | 415, 996 |
| ErhI | CCWWGG | 2 cut(s) | 1337, 1750 |
| Esp3I | CGTCTC | 1 cut(s) | 338 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2297, 2329 |
| FaqI | GGGAC | 2 cut(s) | 20, 2249 |
| FauI | CCCGC | 2 cut(s) | 1604, 2416 |
| FauNDI | CATATG | 1 cut(s) | 1321 |
| FbaI | TGATCA | 1 cut(s) | 1324 |
| Fnu4HI | GCNGC | 6 cut(s) | 1492, 1559, 1562, 1985, 2781, 2784 |
| Fsp4HI | GCNGC | 6 cut(s) | 1492, 1559, 1562, 1985, 2781, 2784 |
| FspBI | CTAG | 7 cut(s) | 110, 891, 975, 1338, 1478, 2171, 2684 |
| GluI | GCNGC | 6 cut(s) | 1492, 1559, 1562, 1985, 2781, 2784 |
| GsaI | CCCAGC | 1 cut(s) | 1294 |
| GsuI | CTGGAG | 1 cut(s) | 792 |
| HaeIII | GGCC | 4 cut(s) | 1289, 1417, 1491, 2491 |
| HapII | CCGG | 4 cut(s) | 745, 1765, 1940, 2697 |
| HgaI | GACGC | 3 cut(s) | 839, 1395, 2246 |
| Hin1I | GRCGYC | 1 cut(s) | 1387 |
| HincII | GTYRAC | 1 cut(s) | 2137 |
| HindII | GTYRAC | 1 cut(s) | 2137 |
| HindIII | AAGCTT | 4 cut(s) | 1894, 2311, 2723, 2768 |
| HpaI | GTTAAC | 1 cut(s) | 2137 |
| HpaII | CCGG | 4 cut(s) | 745, 1765, 1940, 2697 |
| HphI | GGTGA | 6 cut(s) | 524, 1160, 1753, 2016, 2588, 2711 |
| Hpy166II | GTNNAC | 6 cut(s) | 896, 1052, 1851, 2024, 2137, 2434 |
| Hpy8I | GTNNAC | 6 cut(s) | 896, 1052, 1851, 2024, 2137, 2434 |
| HpyAV | CCTTC | 8 cut(s) | 292, 548, 785, 996, 2077, 2110, 2401, 2737 |
| HpyCH4III | ACNGT | 9 cut(s) | 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737 |
| HpyCH4IV | ACGT | 2 cut(s) | 1365, 2064 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 724, 866, 964, 1081, 1542, 1952 |
| HpySE526I | ACGT | 2 cut(s) | 1365, 2064 |
| Hsp92I | GRCGYC | 1 cut(s) | 1387 |
| Kpn2I | TCCGGA | 1 cut(s) | 1939 |
| Ksp22I | TGATCA | 1 cut(s) | 1324 |
| KspAI | GTTAAC | 1 cut(s) | 2137 |
| LguI | GCTCTTC | 2 cut(s) | 1207, 2697 |
| LmnI | GCTCC | 9 cut(s) | 113, 359, 520, 787, 845, 1525, 1951, 1960, 2035 |
| Lsp1109I | GCAGC | 5 cut(s) | 1548, 1570, 1996, 2767, 2770 |
| LweI | GCATC | 3 cut(s) | 223, 1598, 1878 |
| MaeI | CTAG | 7 cut(s) | 110, 891, 975, 1338, 1478, 2171, 2684 |
| MaeII | ACGT | 2 cut(s) | 1365, 2064 |
| MaeIII | GTNAC | 6 cut(s) | 901, 1368, 1394, 1528, 1759, 2060 |
| MbiI | CCGCTC | 1 cut(s) | 523 |
| MfeI | CAATTG | 1 cut(s) | 1950 |
| MflI | RGATCY | 5 cut(s) | 811, 1024, 1034, 2651, 2667 |
| MhlI | GDGCHC | 2 cut(s) | 38, 1522 |
| MlsI | TGGCCA | 1 cut(s) | 1417 |
| MluNI | TGGCCA | 1 cut(s) | 1417 |
| MlyI | GAGTC | 2 cut(s) | 2, 2688 |
| MmeI | TCCRAC | 2 cut(s) | 138, 154 |
| Mox20I | TGGCCA | 1 cut(s) | 1417 |
| Mph1103I | ATGCAT | 2 cut(s) | 415, 996 |
| MroI | TCCGGA | 1 cut(s) | 1939 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1216 |
| MscI | TGGCCA | 1 cut(s) | 1417 |
| MslI | CAYNNNNRTG | 3 cut(s) | 627, 1749, 1755 |
| Msp20I | TGGCCA | 1 cut(s) | 1417 |
| MspA1I | CMGCKG | 1 cut(s) | 1561 |
| MspCI | CTTAAG | 1 cut(s) | 2402 |
| MspI | CCGG | 4 cut(s) | 745, 1765, 1940, 2697 |
| MspR9I | CCNGG | 9 cut(s) | 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493 |
| MunI | CAATTG | 1 cut(s) | 1950 |
| MvaI | CCWGG | 7 cut(s) | 843, 1014, 1072, 1305, 2019, 2439, 2493 |
| MvnI | CGCG | 1 cut(s) | 2143 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 724, 866, 964, 1081, 1542, 1952 |
| NciI | CCSGG | 2 cut(s) | 1765, 1766 |
| NcoI | CCATGG | 1 cut(s) | 1750 |
| NdeI | CATATG | 1 cut(s) | 1321 |
| NheI | GCTAGC | 1 cut(s) | 1477 |
| NlaIV | GGNNCC | 6 cut(s) | 35, 594, 636, 804, 1026, 1036 |
| NmuCI | GTSAC | 5 cut(s) | 901, 1368, 1394, 1759, 2060 |
| NruI | TCGCGA | 1 cut(s) | 2143 |
| NsiI | ATGCAT | 2 cut(s) | 415, 996 |
| NspI | RCATGY | 2 cut(s) | 902, 1536 |
| PagI | TCATGA | 1 cut(s) | 1882 |
| PciI | ACATGT | 1 cut(s) | 898 |
| PciSI | GCTCTTC | 2 cut(s) | 1207, 2697 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 363, 372 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1216 |
| PfeI | GAWTC | 8 cut(s) | 49, 200, 1257, 1591, 2228, 2282, 2469, 2506 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1511, 2018 |
| PinAI | ACCGGT | 1 cut(s) | 2696 |
| PkrI | GCNGC | 6 cut(s) | 1493, 1560, 1563, 1986, 2782, 2785 |
| PleI | GAGTC | 2 cut(s) | 2, 2687 |
| PmaCI | CACGTG | 2 cut(s) | 1366, 2065 |
| PmlI | CACGTG | 2 cut(s) | 1366, 2065 |
| PpsI | GAGTC | 2 cut(s) | 2, 2687 |
| Ppu21I | YACGTR | 2 cut(s) | 1366, 2065 |
| PscI | ACATGT | 1 cut(s) | 898 |
| PshBI | ATTAAT | 1 cut(s) | 2384 |
| Psp6I | CCWGG | 7 cut(s) | 841, 1012, 1070, 1303, 2017, 2437, 2491 |
| PspCI | CACGTG | 2 cut(s) | 1366, 2065 |
| PspFI | CCCAGC | 1 cut(s) | 1290 |
| PspGI | CCWGG | 7 cut(s) | 841, 1012, 1070, 1303, 2017, 2437, 2491 |
| PspN4I | GGNNCC | 6 cut(s) | 35, 594, 636, 804, 1026, 1036 |
| PspPI | GGNCC | 6 cut(s) | 593, 887, 1052, 1288, 1316, 2489 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1827, 1859 |
| PstI | CTGCAG | 1 cut(s) | 1560 |
| PsuI | RGATCY | 5 cut(s) | 811, 1024, 1034, 2651, 2667 |
| PvuII | CAGCTG | 1 cut(s) | 1561 |
| RruI | TCGCGA | 1 cut(s) | 2143 |
| RsaI | GTAC | 7 cut(s) | 328, 683, 881, 1575, 1738, 1918, 2204 |
| RsaNI | GTAC | 7 cut(s) | 327, 682, 880, 1574, 1737, 1917, 2203 |
| RseI | CAYNNNNRTG | 3 cut(s) | 627, 1749, 1755 |
| SapI | GCTCTTC | 2 cut(s) | 1207, 2697 |
| SatI | GCNGC | 6 cut(s) | 1492, 1559, 1562, 1985, 2781, 2784 |
| Sau96I | GGNCC | 6 cut(s) | 593, 887, 1052, 1288, 1316, 2489 |
| ScaI | AGTACT | 4 cut(s) | 881, 1575, 1738, 2204 |
| SchI | GAGTC | 2 cut(s) | 2, 2688 |
| ScrFI | CCNGG | 9 cut(s) | 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493 |
| SduI | GDGCHC | 2 cut(s) | 38, 1522 |
| SfaNI | GCATC | 3 cut(s) | 223, 1598, 1878 |
| SfcI | CTRYAG | 2 cut(s) | 1556, 2030 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2696 |
| SinI | GGWCC | 4 cut(s) | 593, 887, 1052, 1316 |
| SmaI | CCCGGG | 1 cut(s) | 1766 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 627, 1749, 1755 |
| SmlI | CTYRAG | 1 cut(s) | 2402 |
| SmoI | CTYRAG | 1 cut(s) | 2402 |
| SsiI | CCGC | 5 cut(s) | 523, 1492, 1611, 2390, 2423 |
| SspI | AATATT | 2 cut(s) | 1708, 2447 |
| SspMI | CTAG | 7 cut(s) | 110, 891, 975, 1338, 1478, 2171, 2684 |
| StyD4I | CCNGG | 9 cut(s) | 841, 1012, 1070, 1303, 1763, 1764, 2017, 2437, 2491 |
| StyI | CCWWGG | 2 cut(s) | 1337, 1750 |
| TaaI | ACNGT | 9 cut(s) | 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737 |
| TaiI | ACGT | 2 cut(s) | 1368, 2067 |
| TaqI | TCGA | 5 cut(s) | 366, 529, 687, 1632, 1715 |
| TaqII | GACCGA | 1 cut(s) | 711 |
| TatI | WGTACW | 4 cut(s) | 879, 1573, 1736, 2202 |
| TauI | GCSGC | 1 cut(s) | 1494 |
| TfiI | GAWTC | 8 cut(s) | 49, 200, 1257, 1591, 2228, 2282, 2469, 2506 |
| TscAI | CASTG | 6 cut(s) | 92, 1054, 1227, 1243, 1489, 2218 |
| TseFI | GTSAC | 5 cut(s) | 901, 1368, 1394, 1759, 2060 |
| TseI | GCWGC | 5 cut(s) | 1558, 1561, 1984, 2780, 2783 |
| Tsp45I | GTSAC | 5 cut(s) | 901, 1368, 1394, 1759, 2060 |
| TspDTI | ATGAA | 8 cut(s) | 167, 414, 804, 825, 1808, 1889, 1896, 2780 |
| TspGWI | ACGGA | 1 cut(s) | 372 |
| TspMI | CCCGGG | 1 cut(s) | 1764 |
| TspRI | CASTG | 6 cut(s) | 92, 1054, 1227, 1243, 1489, 2218 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1511, 2018 |
| Vha464I | CTTAAG | 1 cut(s) | 2402 |
| VpaK11BI | GGWCC | 4 cut(s) | 593, 887, 1052, 1316 |
| VspI | ATTAAT | 1 cut(s) | 2384 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1069, 2687 |
| XapI | RAATTY | 5 cut(s) | 1964, 1972, 2045, 2149, 2525 |
| XceI | RCATGY | 2 cut(s) | 902, 1536 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1046 |
| XmaI | CCCGGG | 1 cut(s) | 1764 |
| XmaJI | CCTAGG | 1 cut(s) | 1337 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1216 |
| XspI | CTAG | 7 cut(s) | 110, 891, 975, 1338, 1478, 2171, 2684 |
| ZrmI | AGTACT | 4 cut(s) | 881, 1575, 1738, 2204 |
| Zsp2I | ATGCAT | 2 cut(s) | 415, 996 |