Prupe.2G184400_v2.0.a1

Probable zinc-ribbon domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
22603365 .. 22608659
5295 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G184400.1

Sequence Viewer

Length: 2790 bp
ATGGGGGACTCAGCTAAAGTGAGGTTGGTTCGGTGCCCAAAATGTGAGAATCTTCTCCCCGAGCTTGCTGATTACTCTGTTTATCAGTGTGGTGGTTGTGGTGCTGTTCTAGGAGCTAACAAGAAAAGGCAAGAGGGGGATACTTTGTCCATGAAGTCGGACGAAGAAAGGGTTGGAGGAGTTTCTGCTAAATCAGATGATTCAGATAATAAAGGAATAGTTGTTTTGACTGATGCCTCTGATACTGATGTTAAGTCAAGTGATGGCTCTTTGAGGTTTGATCTCGGGGATTTAGAGAAGGAAGATGTTAAAACTGCTGAAATCTGTACGAAGCAAGCCAAAGAGACGACTGATAACGGAGCTGTCGAGGATGGCGTAGGTATGAGCGTGGAAAGAGATGAATTGAGCAATGCATTGGGAAGAGAGCATGGAGATTTGAATGTGGAATTGAGTTCCATGAGTGAAAGCCGAAGATCAGGATGGATGGCAGATTGGCAAACTTGGGAGAATGGTGAAAGGGAGCGGTATCGAAGACATCCAAGAATTGATGTTGAAGGTATGAGGTCTTCAACTTCAAATTATCCAGATGAGGGTCCATCAAATTATCATTTGGGTTCTTCTCATAGGGGTGGGGAACCATTGAGGAATACTAATGACCCAAATGGGGCAAACAGAGTTCTGTACCTCGAACAAGACCGAGCTGAGCTTCTAAAGAAGCTGGATGAGCTAAGGGATCAACTTAGCCGGTCTTGTAATTTGGTTGATAAACCGAAAGAGAAAGCTCCCCATGAAGGGGGGATGGTTCCTCCAGATCCTTATGGTAGTTCTGACGCTTCATACCCAGGAGCTTCTTCAGGGGCAAATAGGGCTTCAATGCAGTACTTTGGACCTAGTAAACATGTCACAGGACACTCTCATTTCAATCATTTTCCTGAGCCATATCCCTACACCAATGGGCGTGAAATGCCTATGCCTAGCTTTTCTCCTTCCATGCATAATTCAAACCATTTTCCTGGGTATGGGGATCCTTTTGGATCCCAAATGCTCAGTGGACCTCCTCATCCCTTTCCCAGGCAATACCAGCAACCATCTCATCCATACTTTTCTGGACAGTATGCTGAAAACAGTCCTGATCCTTATGAGCTTTACCCACATAGTGCAACATTTCACCATCCTACTTGCCCTTGTTTCTATTGCTATGACAAACACAGAAGAGCTTCAGTGCCAGTTCCATCCACTGCTTTTCACAATAAAAGATTCCCTGATTTCCCTAACAATCCCATGTTGGCCCAGCCTGAAAATCCTGGGATGATTGGTCCATATGATCACAACAAACCTAGGACTGCAATTCCTCCACCCTTTCACGTGTCACAAGCCCATACAAGACGCCCAAGTGACCAACCCCATACAAGATGGCCAAATGACCTTAACTCCCACATGGACAGTTTTGCTCATTCCCGTCCAGAGAGGGTGGTGCTAGCCAGTGGTGGCCGCCGATGTCTTCCATTTTCTGGTGGTGCTCCATTTGTAACATGCAATAATTGCTTTGAACTTCTGCAGCTGCCCAAGAGAGTACTTATTGGGGAAAAGAATCAACAGAAAATGCGATGCGGGGCTTGTTCAACAGTAATCGATTTTTCTGTTTCCAATAAGAAACTTGTCCTTTCCCATCACGCAGAAGCACAGCAAAATCCATCAGAGGTTAATATTAGCTCGAATGAGGTGGTCAAAGATAGTACTTCACATTCCCATGGTCGTGTCACCCGGGTCTATGCTCATTTCTCTTCTGATGATTATGATAATTCTGGTTATGATTTTCATTCAATAGATAGAGAACCTGTTTTACCGTCCACAGCCCCAAGTTCAACAACAGGCAAGCCTCATGAGATGCAAAGCTTTCATTCTTCATCTCCAAGTACCTCTGAGGATGACTGCAATCCGGAAGCTCCAATTGCTCCAAAAGAATTCACAAATTCTATTCAGCAGCCAACCAAAGCCACTTTTTCTCCTCCACCTCCTGGTTCACCTCTACAGGAGCATTTTGAATTCTCATCTAACAGTCACGTGATAAACCGACTTGGGAAGGGAAACCGAAGTAGTCGCTCAGATCAAGAGAAGGTAAAACCAAATAAGGTTAACTCGCGACAAAATTCGTTGAAAGAGACATCACTAGCAACTGAGATGGAGGTATCATTTAATGAGTACTCTAACACTGGGGTTTCCCAAGATTCTTGGGACGCAAACAAAGAAGAAGATCAGCCAAGAACCAACAAAGGGAGTGAATCATTTATTACCAACTTTATTAAGAAAAGCTTTAGGGATTTTTCCAAATCAAATCAAACAAATGAGCATGGGAGAAGCAATGTTTCAGTTAATGGGCAATTAATAGCGGATCGTGTGCTTAAGAAGGCTGAAAAGATGGCGGGAACAGTCCACCCTGGACAATATTGGTATGATTTCCGAGCTGGATTCTGGGGTGTCATGGGTGGGCCTGGTCTTGGCATGATTCCTCCATTTATTGAAGAATTCAATTATCCCATGCCTCAGAACTGTGCTGGTGGAGATACTGGTATCTTTGTGAATGGAAGAGAGCTTCACCAAAAAGATTTAGATTTGCTGTCCAGTAGAGGACTTCCCACAACCAGAGATAGATCTTACATCATAGAGATCTCGGGGAGAGTCCTAGATGAGGACACCGGTGAAGAGCTTGATTGTCTTGGCAAGCTTGCCCCAACGGTTGAGAAGGTAAAAAGGGGATTTGGCATGAAGCTTCCAAGAGCTGCTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

930

Amino Acids

103.06

Weight (kDa)

6.13

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 33
AccB7I CCANNNNNTGG 2 cut(s) 1511, 2018
AccBSI CCGCTC 1 cut(s) 523
AccII CGCG 1 cut(s) 2143
AccIII TCCGGA 1 cut(s) 1939
AciI CCGC 5 cut(s) 523, 1492, 1611, 2390, 2423
AclWI GGATC 8 cut(s) 741, 806, 1019, 1029, 1032, 1042, 1127, 2400
AcoI YGGCCR 2 cut(s) 1415, 1489
AcsI RAATTY 5 cut(s) 1964, 1972, 2045, 2149, 2525
AcuI CTGAAG 2 cut(s) 837, 1203
AcvI CACGTG 2 cut(s) 1366, 2065
AcyI GRCGYC 1 cut(s) 1387
AdeI CACNNNGTG 1 cut(s) 1157
AfaI GTAC 7 cut(s) 328, 683, 881, 1575, 1738, 1918, 2204
AflII CTTAAG 1 cut(s) 2402
AflIII ACRYGT 2 cut(s) 898, 1365
AgeI ACCGGT 1 cut(s) 2696
AjnI CCWGG 7 cut(s) 841, 1012, 1070, 1303, 2017, 2437, 2491
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
Alw21I GWGCWC 1 cut(s) 1522
Alw26I GTCTC 2 cut(s) 338, 2156
AlwI GGATC 8 cut(s) 741, 806, 1019, 1029, 1032, 1042, 1127, 2400
Ama87I CYCGRG 4 cut(s) 59, 284, 1764, 2671
Aor13HI TCCGGA 1 cut(s) 1939
AoxI GGCC 4 cut(s) 1287, 1415, 1489, 2489
ApeKI GCWGC 5 cut(s) 1558, 1561, 1984, 2780, 2783
ApoI RAATTY 5 cut(s) 1964, 1972, 2045, 2149, 2525
AseI ATTAAT 1 cut(s) 2384
AsiGI ACCGGT 1 cut(s) 2696
Asp700I GAANNNNTTC 1 cut(s) 1216
AspA2I CCTAGG 1 cut(s) 1337
AspS9I GGNCC 6 cut(s) 593, 887, 1052, 1288, 1316, 2489
AsuC2I CCSGG 2 cut(s) 1765, 1766
AsuHPI GGTGA 6 cut(s) 524, 1160, 1753, 2016, 2588, 2711
AsuNHI GCTAGC 1 cut(s) 1477
AvaI CYCGRG 4 cut(s) 59, 284, 1764, 2671
AvaII GGWCC 4 cut(s) 593, 887, 1052, 1316
AvrII CCTAGG 1 cut(s) 1337
BaeGI GKGCMC 1 cut(s) 38
BaeI ACNNNNGTAYC 2 cut(s) 234, 267
BalI TGGCCA 1 cut(s) 1417
BamHI GGATCC 2 cut(s) 1024, 1034
BanI GGYRCC 1 cut(s) 33
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbrPI CACGTG 2 cut(s) 1366, 2065
BbsI GAAGAC 3 cut(s) 538, 558, 1493
Bbv12I GWGCWC 1 cut(s) 1522
BbvI GCAGC 5 cut(s) 1548, 1570, 1996, 2767, 2770
BciT130I CCWGG 7 cut(s) 843, 1014, 1072, 1305, 2019, 2439, 2493
BciVI GTATCC 1 cut(s) 133
BclI TGATCA 1 cut(s) 1324
BcnI CCSGG 2 cut(s) 1765, 1766
BcoDI GTCTC 2 cut(s) 338, 2156
BfaI CTAG 7 cut(s) 110, 891, 975, 1338, 1478, 2171, 2684
BfmI CTRYAG 2 cut(s) 1556, 2030
BfrI CTTAAG 1 cut(s) 2402
BfuI GTATCC 1 cut(s) 133
BglII AGATCT 2 cut(s) 2651, 2667
BisI GCNGC 6 cut(s) 1492, 1559, 1562, 1985, 2781, 2784
BlnI CCTAGG 1 cut(s) 1337
BlpI GCTNAGC 1 cut(s) 702
BlsI GCNGC 6 cut(s) 1493, 1560, 1563, 1986, 2782, 2785
BmcAI AGTACT 4 cut(s) 881, 1575, 1738, 2204
Bme1390I CCNGG 9 cut(s) 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493
Bme18I GGWCC 4 cut(s) 593, 887, 1052, 1316
BmeT110I CYCGRG 4 cut(s) 59, 284, 1764, 2671
BmgT120I GGNCC 6 cut(s) 593, 887, 1052, 1288, 1316, 2489
BmiI GGNNCC 6 cut(s) 35, 594, 636, 804, 1026, 1036
BmrFI CCNGG 9 cut(s) 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493
BmrI ACTGGG 1 cut(s) 2223
BmsI GCATC 3 cut(s) 223, 1598, 1878
BmtI GCTAGC 1 cut(s) 1481
BmuI ACTGGG 1 cut(s) 2223
BpiI GAAGAC 3 cut(s) 538, 558, 1493
BpmI CTGGAG 1 cut(s) 792
Bpu10I CCTNAGC 2 cut(s) 728, 933
Bpu1102I GCTNAGC 1 cut(s) 702
BpuMI CCSGG 2 cut(s) 1765, 1766
Bsa29I ATCGAT 1 cut(s) 1632
BsaAI YACGTR 2 cut(s) 1366, 2065
BsaHI GRCGYC 1 cut(s) 1387
BsaJI CCNNGG 8 cut(s) 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437
BsaWI WCCGGW 2 cut(s) 1939, 2696
BsaXI ACNNNNNCTCC 4 cut(s) 1415, 1445, 1990, 2020
Bse118I RCCGGY 2 cut(s) 744, 2696
Bse1I ACTGG 5 cut(s) 1226, 1482, 2218, 2572, 2622
Bse3DI GCAATG 2 cut(s) 415, 2368
BseAI TCCGGA 1 cut(s) 1939
BseBI CCWGG 7 cut(s) 843, 1014, 1072, 1305, 2019, 2439, 2493
BseCI ATCGAT 1 cut(s) 1632
BseDI CCNNGG 8 cut(s) 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437
BseMI GCAATG 2 cut(s) 415, 2368
BseMII CTCAG 8 cut(s) 24, 693, 924, 1060, 1914, 2118, 2169, 2558
BseNI ACTGG 5 cut(s) 1226, 1482, 2218, 2572, 2622
BseRI GAGGAG 3 cut(s) 192, 1047, 1998
BseSI GKGCMC 1 cut(s) 38
BseXI GCAGC 5 cut(s) 1548, 1570, 1996, 2767, 2770
BseYI CCCAGC 1 cut(s) 1290
Bsh1236I CGCG 1 cut(s) 2143
BshFI GGCC 4 cut(s) 1289, 1417, 1491, 2491
BshNI GGYRCC 1 cut(s) 33
BshTI ACCGGT 1 cut(s) 2696
BshVI ATCGAT 1 cut(s) 1632
BsiHKAI GWGCWC 1 cut(s) 1522
BsiHKCI CYCGRG 4 cut(s) 59, 284, 1764, 2671
BsiSI CCGG 4 cut(s) 745, 1765, 1940, 2697
BslFI GGGAC 2 cut(s) 20, 2249
BsmAI GTCTC 2 cut(s) 338, 2156
BsmBI CGTCTC 1 cut(s) 338
BsmFI GGGAC 2 cut(s) 20, 2249
BsnI GGCC 4 cut(s) 1289, 1417, 1491, 2491
BsoBI CYCGRG 4 cut(s) 59, 284, 1764, 2671
Bsp1286I GDGCHC 2 cut(s) 38, 1522
Bsp13I TCCGGA 1 cut(s) 1939
Bsp1720I GCTNAGC 1 cut(s) 702
Bsp19I CCATGG 1 cut(s) 1750
Bsp68I TCGCGA 1 cut(s) 2143
BspACI CCGC 5 cut(s) 523, 1492, 1611, 2390, 2423
BspANI GGCC 4 cut(s) 1289, 1417, 1491, 2491
BspCNI CTCAG 8 cut(s) 23, 694, 925, 1059, 1915, 2117, 2170, 2557
BspDI ATCGAT 1 cut(s) 1632
BspEI TCCGGA 1 cut(s) 1939
BspFNI CGCG 1 cut(s) 2143
BspHI TCATGA 1 cut(s) 1882
BspLI GGNNCC 6 cut(s) 35, 594, 636, 804, 1026, 1036
BspMAI CTGCAG 1 cut(s) 1560
BspOI GCTAGC 1 cut(s) 1481
BspPI GGATC 8 cut(s) 741, 806, 1019, 1029, 1032, 1042, 1127, 2400
BspQI GCTCTTC 2 cut(s) 1207, 2697
BspT107I GGYRCC 1 cut(s) 33
BspTI CTTAAG 1 cut(s) 2402
BsrBI CCGCTC 1 cut(s) 523
BsrDI GCAATG 2 cut(s) 415, 2368
BsrFI RCCGGY 2 cut(s) 744, 2696
BsrI ACTGG 5 cut(s) 1226, 1482, 2218, 2572, 2622
BssAI RCCGGY 2 cut(s) 744, 2696
BssECI CCNNGG 8 cut(s) 841, 1013, 1070, 1304, 1337, 1750, 1764, 2437
BssNI GRCGYC 1 cut(s) 1387
BssT1I CCWWGG 2 cut(s) 1337, 1750
Bst2UI CCWGG 7 cut(s) 843, 1014, 1072, 1305, 2019, 2439, 2493
Bst4CI ACNGT 9 cut(s) 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737
Bst6I CTCTTC 5 cut(s) 415, 1207, 1789, 2581, 2697
BstACI GRCGYC 1 cut(s) 1387
BstAFI CTTAAG 1 cut(s) 2402
BstAPI GCANNNNNTGC 1 cut(s) 1542
BstBAI YACGTR 2 cut(s) 1366, 2065
BstC8I GCNNGC 6 cut(s) 66, 336, 1479, 1877, 2723, 2727
BstDSI CCRYGG 1 cut(s) 1750
BstENI CCTNNNNNAGG 2 cut(s) 1069, 2687
BstFNI CGCG 1 cut(s) 2143
BstMAI GTCTC 2 cut(s) 338, 2156
BstMWI GCNNNNNNNGC 6 cut(s) 724, 866, 964, 1081, 1542, 1952
BstNI CCWGG 7 cut(s) 843, 1014, 1072, 1305, 2019, 2439, 2493
BstNSI RCATGY 2 cut(s) 902, 1536
BstSCI CCNGG 9 cut(s) 841, 1012, 1070, 1303, 1763, 1764, 2017, 2437, 2491
BstSFI CTRYAG 2 cut(s) 1556, 2030
BstSLI GKGCMC 1 cut(s) 38
BstUI CGCG 1 cut(s) 2143
BstV1I GCAGC 5 cut(s) 1548, 1570, 1996, 2767, 2770
BstV2I GAAGAC 3 cut(s) 538, 558, 1493
BstX2I RGATCY 5 cut(s) 811, 1024, 1034, 2651, 2667
BstXI CCANNNNNNTGG 1 cut(s) 1013
BstYI RGATCY 5 cut(s) 811, 1024, 1034, 2651, 2667
Bsu15I ATCGAT 1 cut(s) 1632
BsuI GTATCC 1 cut(s) 133
BsuRI GGCC 4 cut(s) 1289, 1417, 1491, 2491
BsuTUI ATCGAT 1 cut(s) 1632
BtgI CCRYGG 1 cut(s) 1750
BtgZI GCGATG 1 cut(s) 1621
BtsI GCAGTG 1 cut(s) 1236
BtsIMutI CAGTG 6 cut(s) 92, 1054, 1227, 1236, 1489, 2211
BtuMI TCGCGA 1 cut(s) 2143
Cac8I GCNNGC 6 cut(s) 66, 336, 1479, 1877, 2723, 2727
CciI TCATGA 1 cut(s) 1882
Cfr10I RCCGGY 2 cut(s) 744, 2696
Cfr13I GGNCC 6 cut(s) 593, 887, 1052, 1288, 1316, 2489
Cfr9I CCCGGG 1 cut(s) 1764
ClaI ATCGAT 1 cut(s) 1632
CseI GACGC 3 cut(s) 839, 1395, 2246
Csp6I GTAC 7 cut(s) 327, 682, 880, 1574, 1737, 1917, 2203
CspAI ACCGGT 1 cut(s) 2696
CviQI GTAC 7 cut(s) 327, 682, 880, 1574, 1737, 1917, 2203
DraIII CACNNNGTG 1 cut(s) 1157
EaeI YGGCCR 2 cut(s) 1415, 1489
Eam1104I CTCTTC 5 cut(s) 415, 1207, 1789, 2581, 2697
EarI CTCTTC 5 cut(s) 415, 1207, 1789, 2581, 2697
Eco130I CCWWGG 2 cut(s) 1337, 1750
Eco47I GGWCC 4 cut(s) 593, 887, 1052, 1316
Eco57I CTGAAG 2 cut(s) 837, 1203
Eco72I CACGTG 2 cut(s) 1366, 2065
Eco88I CYCGRG 4 cut(s) 59, 284, 1764, 2671
EcoNI CCTNNNNNAGG 2 cut(s) 1069, 2687
EcoRI GAATTC 3 cut(s) 1964, 2045, 2525
EcoRII CCWGG 7 cut(s) 841, 1012, 1070, 1303, 2017, 2437, 2491
EcoT14I CCWWGG 2 cut(s) 1337, 1750
EcoT22I ATGCAT 2 cut(s) 415, 996
ErhI CCWWGG 2 cut(s) 1337, 1750
Esp3I CGTCTC 1 cut(s) 338
FalI AAGNNNNNCTT 2 cut(s) 2297, 2329
FaqI GGGAC 2 cut(s) 20, 2249
FauI CCCGC 2 cut(s) 1604, 2416
FauNDI CATATG 1 cut(s) 1321
FbaI TGATCA 1 cut(s) 1324
Fnu4HI GCNGC 6 cut(s) 1492, 1559, 1562, 1985, 2781, 2784
Fsp4HI GCNGC 6 cut(s) 1492, 1559, 1562, 1985, 2781, 2784
FspBI CTAG 7 cut(s) 110, 891, 975, 1338, 1478, 2171, 2684
GluI GCNGC 6 cut(s) 1492, 1559, 1562, 1985, 2781, 2784
GsaI CCCAGC 1 cut(s) 1294
GsuI CTGGAG 1 cut(s) 792
HaeIII GGCC 4 cut(s) 1289, 1417, 1491, 2491
HapII CCGG 4 cut(s) 745, 1765, 1940, 2697
HgaI GACGC 3 cut(s) 839, 1395, 2246
Hin1I GRCGYC 1 cut(s) 1387
HincII GTYRAC 1 cut(s) 2137
HindII GTYRAC 1 cut(s) 2137
HindIII AAGCTT 4 cut(s) 1894, 2311, 2723, 2768
HpaI GTTAAC 1 cut(s) 2137
HpaII CCGG 4 cut(s) 745, 1765, 1940, 2697
HphI GGTGA 6 cut(s) 524, 1160, 1753, 2016, 2588, 2711
Hpy166II GTNNAC 6 cut(s) 896, 1052, 1851, 2024, 2137, 2434
Hpy8I GTNNAC 6 cut(s) 896, 1052, 1851, 2024, 2137, 2434
HpyAV CCTTC 8 cut(s) 292, 548, 785, 996, 2077, 2110, 2401, 2737
HpyCH4III ACNGT 9 cut(s) 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737
HpyCH4IV ACGT 2 cut(s) 1365, 2064
HpyF10VI GCNNNNNNNGC 6 cut(s) 724, 866, 964, 1081, 1542, 1952
HpySE526I ACGT 2 cut(s) 1365, 2064
Hsp92I GRCGYC 1 cut(s) 1387
Kpn2I TCCGGA 1 cut(s) 1939
Ksp22I TGATCA 1 cut(s) 1324
KspAI GTTAAC 1 cut(s) 2137
LguI GCTCTTC 2 cut(s) 1207, 2697
LmnI GCTCC 9 cut(s) 113, 359, 520, 787, 845, 1525, 1951, 1960, 2035
Lsp1109I GCAGC 5 cut(s) 1548, 1570, 1996, 2767, 2770
LweI GCATC 3 cut(s) 223, 1598, 1878
MaeI CTAG 7 cut(s) 110, 891, 975, 1338, 1478, 2171, 2684
MaeII ACGT 2 cut(s) 1365, 2064
MaeIII GTNAC 6 cut(s) 901, 1368, 1394, 1528, 1759, 2060
MbiI CCGCTC 1 cut(s) 523
MfeI CAATTG 1 cut(s) 1950
MflI RGATCY 5 cut(s) 811, 1024, 1034, 2651, 2667
MhlI GDGCHC 2 cut(s) 38, 1522
MlsI TGGCCA 1 cut(s) 1417
MluNI TGGCCA 1 cut(s) 1417
MlyI GAGTC 2 cut(s) 2, 2688
MmeI TCCRAC 2 cut(s) 138, 154
Mox20I TGGCCA 1 cut(s) 1417
Mph1103I ATGCAT 2 cut(s) 415, 996
MroI TCCGGA 1 cut(s) 1939
MroXI GAANNNNTTC 1 cut(s) 1216
MscI TGGCCA 1 cut(s) 1417
MslI CAYNNNNRTG 3 cut(s) 627, 1749, 1755
Msp20I TGGCCA 1 cut(s) 1417
MspA1I CMGCKG 1 cut(s) 1561
MspCI CTTAAG 1 cut(s) 2402
MspI CCGG 4 cut(s) 745, 1765, 1940, 2697
MspR9I CCNGG 9 cut(s) 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493
MunI CAATTG 1 cut(s) 1950
MvaI CCWGG 7 cut(s) 843, 1014, 1072, 1305, 2019, 2439, 2493
MvnI CGCG 1 cut(s) 2143
MwoI GCNNNNNNNGC 6 cut(s) 724, 866, 964, 1081, 1542, 1952
NciI CCSGG 2 cut(s) 1765, 1766
NcoI CCATGG 1 cut(s) 1750
NdeI CATATG 1 cut(s) 1321
NheI GCTAGC 1 cut(s) 1477
NlaIV GGNNCC 6 cut(s) 35, 594, 636, 804, 1026, 1036
NmuCI GTSAC 5 cut(s) 901, 1368, 1394, 1759, 2060
NruI TCGCGA 1 cut(s) 2143
NsiI ATGCAT 2 cut(s) 415, 996
NspI RCATGY 2 cut(s) 902, 1536
PagI TCATGA 1 cut(s) 1882
PciI ACATGT 1 cut(s) 898
PciSI GCTCTTC 2 cut(s) 1207, 2697
PcsI WCGNNNNNNNCGW 2 cut(s) 363, 372
PdmI GAANNNNTTC 1 cut(s) 1216
PfeI GAWTC 8 cut(s) 49, 200, 1257, 1591, 2228, 2282, 2469, 2506
PflMI CCANNNNNTGG 2 cut(s) 1511, 2018
PinAI ACCGGT 1 cut(s) 2696
PkrI GCNGC 6 cut(s) 1493, 1560, 1563, 1986, 2782, 2785
PleI GAGTC 2 cut(s) 2, 2687
PmaCI CACGTG 2 cut(s) 1366, 2065
PmlI CACGTG 2 cut(s) 1366, 2065
PpsI GAGTC 2 cut(s) 2, 2687
Ppu21I YACGTR 2 cut(s) 1366, 2065
PscI ACATGT 1 cut(s) 898
PshBI ATTAAT 1 cut(s) 2384
Psp6I CCWGG 7 cut(s) 841, 1012, 1070, 1303, 2017, 2437, 2491
PspCI CACGTG 2 cut(s) 1366, 2065
PspFI CCCAGC 1 cut(s) 1290
PspGI CCWGG 7 cut(s) 841, 1012, 1070, 1303, 2017, 2437, 2491
PspN4I GGNNCC 6 cut(s) 35, 594, 636, 804, 1026, 1036
PspPI GGNCC 6 cut(s) 593, 887, 1052, 1288, 1316, 2489
PsrI GAACNNNNNNTAC 2 cut(s) 1827, 1859
PstI CTGCAG 1 cut(s) 1560
PsuI RGATCY 5 cut(s) 811, 1024, 1034, 2651, 2667
PvuII CAGCTG 1 cut(s) 1561
RruI TCGCGA 1 cut(s) 2143
RsaI GTAC 7 cut(s) 328, 683, 881, 1575, 1738, 1918, 2204
RsaNI GTAC 7 cut(s) 327, 682, 880, 1574, 1737, 1917, 2203
RseI CAYNNNNRTG 3 cut(s) 627, 1749, 1755
SapI GCTCTTC 2 cut(s) 1207, 2697
SatI GCNGC 6 cut(s) 1492, 1559, 1562, 1985, 2781, 2784
Sau96I GGNCC 6 cut(s) 593, 887, 1052, 1288, 1316, 2489
ScaI AGTACT 4 cut(s) 881, 1575, 1738, 2204
SchI GAGTC 2 cut(s) 2, 2688
ScrFI CCNGG 9 cut(s) 843, 1014, 1072, 1305, 1765, 1766, 2019, 2439, 2493
SduI GDGCHC 2 cut(s) 38, 1522
SfaNI GCATC 3 cut(s) 223, 1598, 1878
SfcI CTRYAG 2 cut(s) 1556, 2030
SgrAI CRCCGGYG 1 cut(s) 2696
SinI GGWCC 4 cut(s) 593, 887, 1052, 1316
SmaI CCCGGG 1 cut(s) 1766
SmiMI CAYNNNNRTG 3 cut(s) 627, 1749, 1755
SmlI CTYRAG 1 cut(s) 2402
SmoI CTYRAG 1 cut(s) 2402
SsiI CCGC 5 cut(s) 523, 1492, 1611, 2390, 2423
SspI AATATT 2 cut(s) 1708, 2447
SspMI CTAG 7 cut(s) 110, 891, 975, 1338, 1478, 2171, 2684
StyD4I CCNGG 9 cut(s) 841, 1012, 1070, 1303, 1763, 1764, 2017, 2437, 2491
StyI CCWWGG 2 cut(s) 1337, 1750
TaaI ACNGT 9 cut(s) 1113, 1127, 1445, 1627, 1848, 2060, 2431, 2552, 2737
TaiI ACGT 2 cut(s) 1368, 2067
TaqI TCGA 5 cut(s) 366, 529, 687, 1632, 1715
TaqII GACCGA 1 cut(s) 711
TatI WGTACW 4 cut(s) 879, 1573, 1736, 2202
TauI GCSGC 1 cut(s) 1494
TfiI GAWTC 8 cut(s) 49, 200, 1257, 1591, 2228, 2282, 2469, 2506
TscAI CASTG 6 cut(s) 92, 1054, 1227, 1243, 1489, 2218
TseFI GTSAC 5 cut(s) 901, 1368, 1394, 1759, 2060
TseI GCWGC 5 cut(s) 1558, 1561, 1984, 2780, 2783
Tsp45I GTSAC 5 cut(s) 901, 1368, 1394, 1759, 2060
TspDTI ATGAA 8 cut(s) 167, 414, 804, 825, 1808, 1889, 1896, 2780
TspGWI ACGGA 1 cut(s) 372
TspMI CCCGGG 1 cut(s) 1764
TspRI CASTG 6 cut(s) 92, 1054, 1227, 1243, 1489, 2218
Van91I CCANNNNNTGG 2 cut(s) 1511, 2018
Vha464I CTTAAG 1 cut(s) 2402
VpaK11BI GGWCC 4 cut(s) 593, 887, 1052, 1316
VspI ATTAAT 1 cut(s) 2384
XagI CCTNNNNNAGG 2 cut(s) 1069, 2687
XapI RAATTY 5 cut(s) 1964, 1972, 2045, 2149, 2525
XceI RCATGY 2 cut(s) 902, 1536
XcmI CCANNNNNNNNNTGG 1 cut(s) 1046
XmaI CCCGGG 1 cut(s) 1764
XmaJI CCTAGG 1 cut(s) 1337
XmnI GAANNNNTTC 1 cut(s) 1216
XspI CTAG 7 cut(s) 110, 891, 975, 1338, 1478, 2171, 2684
ZrmI AGTACT 4 cut(s) 881, 1575, 1738, 2204
Zsp2I ATGCAT 2 cut(s) 415, 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.