Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007002

Physical Location & Seq

Genomic Coordinates Forward (+)

11380954 .. 11385076

Gene Structure 4123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g10600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGGGGACTCGGCTGCTACAGTGAGGCTGGTTCGGTGCCCCAAGTGTGAGAATCTTCTTCCGGAGCTTGATGATTACGCTGTTTACCAGTGTGGTGGTTGTGGTGCTGTTCTTCGAGCAAATAAAAAGAGGCAAGAGGGGGAAACTTTGTTGGAGAAGTCAGACAAAGAGCGGGTTGGAGGAGTTTGTGCTAAATCAGACGATTCAGACAATAAAGGAATAGTTGTGTTGAGTGATGCTTCTGATATGGATGTTAAGTCGGGTGTTGGTTCTTTGAGGTGTGATCAAAGGGATTTAGAGAAGGAAAATGTTAAAAATGCTGAGGTTGTTAGGAAGCAAGCGAAAGATGCAAGTGAGAACTGGTTTGTCGAGGATGGCGTTGATATGAGCATGAAAGGAGATGAATTGGAGAATGCTTCGGGAAGAGAACATGGAGATTTGAATTCCCAATTTGGTCCCATAAGTGCAAGTCGAAGATCGCAATGGATGGCAGATTGGCGAGCTCAAGAGAATGGTGAAAAGGAGGGAGTTCGAAGACATCAAAGAACTGATGTTGGAGGTATCAGGTCTTCAACTTCAACCTATCAAGACGAGGGCCCGTCAAATTACCATTTGGGTTCTTCGTGTAGGGGTGGGGAACCATTGAGAAAAAGTATTGTCCCCGATGAGGCAAACAGAGTTCTGTACCTTGAACATGACCGAGCCGAGCTTCTAAAGAAGCTGGATGAGCTGAGGGATCAACTTAGCCGGTCTTGTGATATGGTTGATAAGCCGAAAGAGAAAGCTCCTGTTGATGGGGGGATGGTTCCTCCAGATCCTTATGGTAGTTCTGACACTTCATATGCAGGTGTTTCTTCCGGGGCAAATAGGGCTTCGATGCAGTACTTTGGACCTGGTAAACCTGTCACAGCACATGCTCATTTCAATCACTTTCCAGAGCCATTTCCCTATACCAATGGCCATGAAATGCCTATGGCTAGCTTTTCTTCTACCATGCATAATTCAAACAATTTTCCTAGATATGGCGATCGTTTTGGATCCCACATGCACAGTGGAGCTCCTCATCCCTTTCCCAGGCAATACCAGCAACCATCGCTTCCATACTTCTCTGGACAGTATGCTGAAAACAATCCTGATCCATTTGAGCTTTACCCAAATAATGCATCGGTTCACCATCCTACTTGCCCTTGCTTCTGTTGCTATGACAATCACCGGAGGGGTTCAGTGCCAGTTCCACCCACTGCTTTCCACAATAAAAGGTTCCCTGATTTCCCTAGTAGTTCCATGTTCCATCCTGAAAACCCGGGGATGGTCGGTCCATATGATCACAATAAACCTCGGACTGTGATTCCTCCACCCTTTAATGTTTCGCAAACCCATACAAGATGGCCAAGTGACCTTAACCCCCAAATGGGAAGCTTTGTTCATCCCCGTCCAGAGAGGGTGGTGCCAACCAGTGGTGGCCGACGATGTCTTCCATTTTCTGGTGGTGCTCCATTTGTAACATGTAATAATTGCTTTGAAATTCTGCAGCTGCCCAAAAAAGTATTGCTTGCGGAAAAGAATAAACAGAAGGTGCGATGCGGGGCATGCTTTACTGTGATCGATTTTTCTGTTTCTAATAAGAAACTAGTTCTTTCTCATGCAGAAGCAAAGAAAAATCTGTCGGAAGTTAATAGCTTGAATGAGGTGGTCAATGACAGTACTTTACATTCACATGGCCATGTCACCCGGATCTATGCTCATTTCTCCTCTGATGATTATGATACTTCTGGCTATGATTTTCAGTCAATAGATAGAGAACCTGCGTTACCATCCACAGGCCCAAGTTTAACTGGTAGCAAGCCTCACGAGATGCAAAGCTTTCATTCTTCATCTCCCAGTACCTCTGAGGATAACAGCATCCCAGAAGCTCCAGTTCCTCCAAAAGAATTCACAAATTCTATTCAGCAGCCAATCAAAGGCACTTTTTCTCCGCCTCCTGCTGGTTCACCTCTAGAGGAACACTTTGAGTTCTCATCGAACAATCATGTGATAAACCGACTTGGGAAGGGAAACTGCAGTAGTCGTTCAGATCAAGAGAAGGTAAAGCCAAATAAGGTCACCTCGCGACAAAACTCTTTAAAGGAGACATCAGTAGCAACTGAGATGGAGGTATCATTTAATGACTACTCCAACACTGGGGTTTCCCAAGATTCCTGGGATGCAAACAAAGAGGAGGATCAGCCAAGAACCAACAAAGGGAGCGATTCATTTATTACGAACTTTATTAAGAAGAGCTTCAGGGATTTTTCCAAATCAAATCAGACAAGTGGTGGGAGAAGTAATGTTTCGGTTAATGGGAATTTAATACCAGATCGTGTGCTCAAGAAGGCCGAAAAGATGGCGGGAACAGTCCATCCTGGACAATATTGGTATGATTTCCGAGCTGGATTCTGGGGTGTCATGGGTGGCCATGGTCTTGGCATCATTCCTCCATTTATTGAAGAGTTTAATTATCCCATGCCTCAGAACTGTGCGGCCGGAGATACCGGTATTTTTGTGAATGGAAGGGAGCTTCACCATAAAGATTTGGATTTGCTGTCCAGTAGAGGACTTCCCACAACCAGAGATAGATCTTATATCATCGAGATCTCAGGGAGAGTCCTGGATGAGGATACTGGTGAAGAGCTTGATAGCCTTGGCAAGCTAGCCCCAACAGTTGAGAAGGTAAAACGTGGATTTGGCATGAAGCTTCCAAGAGCAGCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zinc_ribbon_12

Protein Analysis

918

Amino Acids

101.4

Weight (kDa)

6.33

Isoelectric Point (pI)

46.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46380 AT2G46380 AT3G61670 AT3G61670
fragaria_vesca	FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060
malus_domestica	MD01G1076900.v1.1 MD07G1146100.v1.1 MD07G1146300.v1.1
prunus_persica	Prupe.2G184400_v2.0.a1
pyrus_communis	pycom01g10600 pycom07g14570
rosa_chinensis	RchiOBHm_Chr1g0359001
rosa_laevigata	RLG00000027910
rosa_multiflora	Rmu_sc0001176.1_g000013
rosa_roxburghii	Rroxscaffold_4G00297470
rosa_rugosa	Rorug01G0267000
rosa_samantha	Rh1AG280300 Rh1BG247400 Rh1CG264700 Rh1DG275800
rosa_wichuraiana	Rw1G024920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	836
Acc36I	ACCTGC	2 cut(s)	836, 1813
AccB1I	GGYRCC	2 cut(s)	36, 1447
AccB7I	CCANNNNNTGG	2 cut(s)	1457, 1484
AccBSI	CCGCTC	1 cut(s)	172
AccII	CGCG	1 cut(s)	2110
AccIII	TCCGGA	1 cut(s)	61
AciI	CCGC	6 cut(s)	172, 1556, 1584, 1976, 2387, 2519
AclWI	GGATC	7 cut(s)	744, 809, 1032, 1045, 1130, 1742, 2229
AcoI	YGGCCR	6 cut(s)	958, 1388, 1462, 1720, 2452, 2520
AcsI	RAATTY	5 cut(s)	442, 1524, 1931, 1939, 2344
AcuI	CTGAAG	1 cut(s)	2266
AfaI	GTAC	4 cut(s)	686, 884, 1705, 1885
AflIII	ACRYGT	1 cut(s)	1505
AgeI	ACCGGT	1 cut(s)	2531
AgsI	TTSAA	9 cut(s)	442, 573, 579, 692, 925, 1005, 1523, 1684, 2486
AhlI	ACTAGT	1 cut(s)	1630
AjnI	CCWGG	5 cut(s)	892, 1073, 2198, 2401, 2646
AloI	GAACNNNNNNTCC	4 cut(s)	1407, 1439, 2383, 2415
Alw21I	GWGCWC	4 cut(s)	505, 1060, 1495, 2367
Alw26I	GTCTC	1 cut(s)	2123
AlwI	GGATC	7 cut(s)	744, 809, 1032, 1045, 1130, 1742, 2229
Ama87I	CYCGRG	1 cut(s)	1303
Aor13HI	TCCGGA	1 cut(s)	61
AoxI	GGCC	9 cut(s)	595, 958, 1388, 1462, 1720, 1822, 2373, 2452, 2520
ApaI	GGGCCC	1 cut(s)	599
ApeKI	GCWGC	6 cut(s)	14, 1531, 1534, 1951, 2744, 2747
ApoI	RAATTY	5 cut(s)	442, 1524, 1931, 1939, 2344
AsiGI	ACCGGT	1 cut(s)	2531
Asp700I	GAANNNNTTC	1 cut(s)	2279
AspS9I	GGNCC	6 cut(s)	455, 595, 596, 890, 1316, 1823
AsuC2I	CCSGG	4 cut(s)	859, 1304, 1305, 1732
AsuHPI	GGTGA	8 cut(s)	527, 1163, 1202, 1720, 1983, 2095, 2552, 2675
AsuII	TTCGAA	1 cut(s)	532
AsuNHI	GCTAGC	2 cut(s)	977, 2689
AvaI	CYCGRG	1 cut(s)	1303
AvaII	GGWCC	3 cut(s)	455, 890, 1316
BaeGI	GKGCMC	2 cut(s)	41, 599
BalI	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
BamHI	GGATCC	1 cut(s)	1037
BanI	GGYRCC	2 cut(s)	36, 1447
BanII	GRGCYC	3 cut(s)	505, 599, 1060
BarI	GAAGNNNNNNTAC	2 cut(s)	553, 585
BauI	CACGAG	1 cut(s)	1850
BbsI	GAAGAC	3 cut(s)	541, 561, 1466
Bbv12I	GWGCWC	4 cut(s)	505, 1060, 1495, 2367
BbvCI	CCTCAGC	2 cut(s)	321, 731
BbvI	GCAGC	4 cut(s)	1521, 1543, 1963, 2734
BciT130I	CCWGG	5 cut(s)	894, 1075, 2200, 2403, 2648
BciVI	GTATCC	1 cut(s)	2650
BclI	TGATCA	2 cut(s)	283, 1324
BcnI	CCSGG	4 cut(s)	859, 1304, 1305, 1732
BcoDI	GTCTC	1 cut(s)	2123
BcuI	ACTAGT	1 cut(s)	1630
BfaI	CTAG	6 cut(s)	978, 1017, 1275, 1631, 1997, 2690
BfmI	CTRYAG	3 cut(s)	18, 1529, 2059
BfuAI	ACCTGC	2 cut(s)	836, 1813
BfuI	GTATCC	1 cut(s)	2650
BglII	AGATCT	2 cut(s)	2615, 2631
BisI	GCNGC	7 cut(s)	15, 1532, 1535, 1952, 2520, 2745, 2748
BlsI	GCNGC	7 cut(s)	16, 1533, 1536, 1953, 2521, 2746, 2749
BmcAI	AGTACT	2 cut(s)	884, 1705
Bme1390I	CCNGG	9 cut(s)	859, 894, 1075, 1304, 1305, 1732, 2200, 2403, 2648
Bme18I	GGWCC	3 cut(s)	455, 890, 1316
BmeT110I	CYCGRG	1 cut(s)	1303
BmgT120I	GGNCC	6 cut(s)	455, 595, 596, 890, 1316, 1823
BmiI	GGNNCC	8 cut(s)	38, 457, 597, 639, 807, 1039, 1262, 1449
BmrFI	CCNGG	9 cut(s)	859, 894, 1075, 1304, 1305, 1732, 2200, 2403, 2648
BmrI	ACTGGG	2 cut(s)	1875, 2190
BmsI	GCATC	9 cut(s)	226, 337, 867, 1172, 1571, 1845, 1911, 2194, 2475
BmtI	GCTAGC	2 cut(s)	981, 2693
BmuI	ACTGGG	2 cut(s)	1875, 2190
BpiI	GAAGAC	3 cut(s)	541, 561, 1466
BpmI	CTGGAG	2 cut(s)	795, 1899
Bpu10I	CCTNAGC	2 cut(s)	321, 731
Bpu14I	TTCGAA	1 cut(s)	532
BpuEI	CTTGAG	2 cut(s)	489, 2351
BpuMI	CCSGG	4 cut(s)	859, 1304, 1305, 1732
Bsa29I	ATCGAT	1 cut(s)	1605
BsaJI	CCNNGG	8 cut(s)	858, 1073, 1303, 1304, 1337, 2199, 2455, 2680
BsaWI	WCCGGW	3 cut(s)	61, 1212, 2531
BsaXI	ACNNNNNCTCC	2 cut(s)	1957, 1987
Bse118I	RCCGGY	2 cut(s)	747, 2531
Bse3DI	GCAATG	1 cut(s)	488
BseAI	TCCGGA	1 cut(s)	61
BseBI	CCWGG	5 cut(s)	894, 1075, 2200, 2403, 2648
BseCI	ATCGAT	1 cut(s)	1605
BseDI	CCNNGG	8 cut(s)	858, 1073, 1303, 1304, 1337, 2199, 2455, 2680
BseMI	GCAATG	1 cut(s)	488
BseMII	CTCAG	6 cut(s)	312, 722, 1881, 2136, 2522, 2649
BseRI	GAGGAG	4 cut(s)	195, 1050, 1741, 2231
BseSI	GKGCMC	2 cut(s)	41, 599
BseX3I	CGGCCG	1 cut(s)	2520
BseXI	GCAGC	4 cut(s)	1521, 1543, 1963, 2734
Bsh1236I	CGCG	1 cut(s)	2110
Bsh1285I	CGRYCG	2 cut(s)	1030, 2523
BshFI	GGCC	9 cut(s)	597, 960, 1390, 1464, 1722, 1824, 2375, 2454, 2522
BshNI	GGYRCC	2 cut(s)	36, 1447
BshTI	ACCGGT	1 cut(s)	2531
BshVI	ATCGAT	1 cut(s)	1605
BsiEI	CGRYCG	2 cut(s)	1030, 2523
BsiHKAI	GWGCWC	4 cut(s)	505, 1060, 1495, 2367
BsiHKCI	CYCGRG	1 cut(s)	1303
BsiSI	CCGG	8 cut(s)	62, 748, 858, 1213, 1304, 1732, 2523, 2532
BslFI	GGGAC	3 cut(s)	20, 441, 644
BsmAI	GTCTC	1 cut(s)	2123
BsmFI	GGGAC	3 cut(s)	20, 441, 644
BsmI	GAATGC	1 cut(s)	418
BsnI	GGCC	9 cut(s)	597, 960, 1390, 1464, 1722, 1824, 2375, 2454, 2522
BsoBI	CYCGRG	1 cut(s)	1303
Bsp119I	TTCGAA	1 cut(s)	532
Bsp120I	GGGCCC	1 cut(s)	595
Bsp1286I	GDGCHC	6 cut(s)	41, 505, 599, 1060, 1495, 2367
Bsp13I	TCCGGA	1 cut(s)	61
Bsp19I	CCATGG	1 cut(s)	2455
Bsp68I	TCGCGA	1 cut(s)	2110
BspACI	CCGC	6 cut(s)	172, 1556, 1584, 1976, 2387, 2519
BspANI	GGCC	9 cut(s)	597, 960, 1390, 1464, 1722, 1824, 2375, 2454, 2522
BspCNI	CTCAG	6 cut(s)	313, 723, 1882, 2137, 2521, 2648
BspDI	ATCGAT	1 cut(s)	1605
BspEI	TCCGGA	1 cut(s)	61
BspFNI	CGCG	1 cut(s)	2110
BspLI	GGNNCC	8 cut(s)	38, 457, 597, 639, 807, 1039, 1262, 1449
BspMAI	CTGCAG	2 cut(s)	1533, 2063
BspMI	ACCTGC	2 cut(s)	836, 1813
BspOI	GCTAGC	2 cut(s)	981, 2693
BspPI	GGATC	7 cut(s)	744, 809, 1032, 1045, 1130, 1742, 2229
BspQI	GCTCTTC	2 cut(s)	2270, 2661
BspT104I	TTCGAA	1 cut(s)	532
BspT107I	GGYRCC	2 cut(s)	36, 1447
BsrBI	CCGCTC	1 cut(s)	172
BsrDI	GCAATG	1 cut(s)	488
BsrFI	RCCGGY	2 cut(s)	747, 2531
BssAI	RCCGGY	2 cut(s)	747, 2531
BssECI	CCNNGG	8 cut(s)	858, 1073, 1303, 1304, 1337, 2199, 2455, 2680
BssSI	CACGAG	1 cut(s)	1850
BssT1I	CCWWGG	2 cut(s)	2455, 2680
Bst2BI	CACGAG	1 cut(s)	1850
Bst2UI	CCWGG	5 cut(s)	894, 1075, 2200, 2403, 2648
Bst4CI	ACNGT	9 cut(s)	22, 1052, 1116, 1345, 1600, 1703, 2395, 2516, 2701
Bst6I	CTCTTC	4 cut(s)	418, 2270, 2481, 2661
BstBI	TTCGAA	1 cut(s)	532
BstC8I	GCNNGC	8 cut(s)	339, 501, 979, 1554, 1591, 1844, 2687, 2691
BstDEI	CTNAG	7 cut(s)	321, 731, 743, 1890, 2145, 2508, 2635
BstDSI	CCRYGG	1 cut(s)	2455
BstEII	GGTNACC	1 cut(s)	2101
BstENI	CCTNNNNNAGG	2 cut(s)	1072, 2651
BstFNI	CGCG	1 cut(s)	2110
BstMAI	GTCTC	1 cut(s)	2123
BstMCI	CGRYCG	2 cut(s)	1030, 2523
BstMWI	GCNNNNNNNGC	7 cut(s)	347, 727, 869, 1084, 1093, 1197, 1590
BstNI	CCWGG	5 cut(s)	894, 1075, 2200, 2403, 2648
BstNSI	RCATGY	4 cut(s)	917, 1048, 1509, 1593
BstPI	GGTNACC	1 cut(s)	2101
BstSCI	CCNGG	9 cut(s)	857, 892, 1073, 1302, 1303, 1730, 2198, 2401, 2646
BstSFI	CTRYAG	3 cut(s)	18, 1529, 2059
BstSLI	GKGCMC	2 cut(s)	41, 599
BstUI	CGCG	1 cut(s)	2110
BstV1I	GCAGC	4 cut(s)	1521, 1543, 1963, 2734
BstV2I	GAAGAC	3 cut(s)	541, 561, 1466
BstX2I	RGATCY	5 cut(s)	814, 1037, 1734, 2615, 2631
BstXI	CCANNNNNNTGG	2 cut(s)	95, 2462
BstYI	RGATCY	5 cut(s)	814, 1037, 1734, 2615, 2631
BstZI	CGGCCG	1 cut(s)	2520
Bsu15I	ATCGAT	1 cut(s)	1605
BsuI	GTATCC	1 cut(s)	2650
BsuRI	GGCC	9 cut(s)	597, 960, 1390, 1464, 1722, 1824, 2375, 2454, 2522
BsuTUI	ATCGAT	1 cut(s)	1605
BtgI	CCRYGG	1 cut(s)	2455
BtgZI	GCGATG	2 cut(s)	1077, 1594
BtsI	GCAGTG	1 cut(s)	1239
BtsIMutI	CAGTG	7 cut(s)	27, 95, 1057, 1230, 1239, 1462, 2178
BtuMI	TCGCGA	1 cut(s)	2110
BveI	ACCTGC	2 cut(s)	836, 1813
Cac8I	GCNNGC	8 cut(s)	339, 501, 979, 1554, 1591, 1844, 2687, 2691
Cfr10I	RCCGGY	2 cut(s)	747, 2531
Cfr13I	GGNCC	6 cut(s)	455, 595, 596, 890, 1316, 1823
Cfr9I	CCCGGG	1 cut(s)	1303
ClaI	ATCGAT	1 cut(s)	1605
CsiI	ACCWGGT	1 cut(s)	892
Csp6I	GTAC	4 cut(s)	685, 883, 1704, 1884
CspAI	ACCGGT	1 cut(s)	2531
CviQI	GTAC	4 cut(s)	685, 883, 1704, 1884
DdeI	CTNAG	7 cut(s)	321, 731, 743, 1890, 2145, 2508, 2635
DraI	TTTAAA	1 cut(s)	2124
EaeI	YGGCCR	6 cut(s)	958, 1388, 1462, 1720, 2452, 2520
EagI	CGGCCG	1 cut(s)	2520
Eam1104I	CTCTTC	4 cut(s)	418, 2270, 2481, 2661
EarI	CTCTTC	4 cut(s)	418, 2270, 2481, 2661
EciI	GGCGGA	1 cut(s)	1965
Ecl136II	GAGCTC	2 cut(s)	503, 1058
EclXI	CGGCCG	1 cut(s)	2520
Eco130I	CCWWGG	2 cut(s)	2455, 2680
Eco24I	GRGCYC	3 cut(s)	505, 599, 1060
Eco47I	GGWCC	3 cut(s)	455, 890, 1316
Eco52I	CGGCCG	1 cut(s)	2520
Eco53kI	GAGCTC	2 cut(s)	503, 1058
Eco57I	CTGAAG	1 cut(s)	2266
Eco88I	CYCGRG	1 cut(s)	1303
Eco91I	GGTNACC	1 cut(s)	2101
EcoICRI	GAGCTC	2 cut(s)	503, 1058
EcoNI	CCTNNNNNAGG	2 cut(s)	1072, 2651
EcoO109I	RGGNCCY	1 cut(s)	595
EcoO65I	GGTNACC	1 cut(s)	2101
EcoRI	GAATTC	2 cut(s)	442, 1931
EcoRII	CCWGG	5 cut(s)	892, 1073, 2198, 2401, 2646
EcoT14I	CCWWGG	2 cut(s)	2455, 2680
EcoT22I	ATGCAT	2 cut(s)	999, 1165
EcoT38I	GRGCYC	3 cut(s)	505, 599, 1060
ErhI	CCWWGG	2 cut(s)	2455, 2680
FalI	AAGNNNNNCTT	4 cut(s)	1536, 1568, 2264, 2296
FaqI	GGGAC	3 cut(s)	20, 441, 644
FauI	CCCGC	3 cut(s)	165, 1577, 2380
FauNDI	CATATG	2 cut(s)	841, 1321
FbaI	TGATCA	2 cut(s)	283, 1324
Fnu4HI	GCNGC	7 cut(s)	15, 1532, 1535, 1952, 2520, 2745, 2748
FriOI	GRGCYC	3 cut(s)	505, 599, 1060
Fsp4HI	GCNGC	7 cut(s)	15, 1532, 1535, 1952, 2520, 2745, 2748
FspBI	CTAG	6 cut(s)	978, 1017, 1275, 1631, 1997, 2690
GluI	GCNGC	7 cut(s)	15, 1532, 1535, 1952, 2520, 2745, 2748
GsuI	CTGGAG	2 cut(s)	795, 1899
HaeIII	GGCC	9 cut(s)	597, 960, 1390, 1464, 1722, 1824, 2375, 2454, 2522
HapII	CCGG	8 cut(s)	62, 748, 858, 1213, 1304, 1732, 2523, 2532
HindIII	AAGCTT	3 cut(s)	1417, 1861, 2732
HinfI	GANTC	8 cut(s)	8, 52, 203, 1348, 2195, 2249, 2433, 2643
HpaII	CCGG	8 cut(s)	62, 748, 858, 1213, 1304, 1732, 2523, 2532
HphI	GGTGA	8 cut(s)	527, 1163, 1202, 1720, 1983, 2095, 2552, 2675
Hpy166II	GTNNAC	4 cut(s)	85, 899, 1171, 1991
Hpy8I	GTNNAC	4 cut(s)	85, 899, 1171, 1991
Hpy99I	CGWCG	1 cut(s)	1470
HpyAV	CCTTC	7 cut(s)	295, 1567, 2044, 2077, 2365, 2544, 2701
HpyCH4III	ACNGT	9 cut(s)	22, 1052, 1116, 1345, 1600, 1703, 2395, 2516, 2701
HpyCH4IV	ACGT	1 cut(s)	2716
HpyF10VI	GCNNNNNNNGC	7 cut(s)	347, 727, 869, 1084, 1093, 1197, 1590
HpyF3I	CTNAG	7 cut(s)	321, 731, 743, 1890, 2145, 2508, 2635
HpySE526I	ACGT	1 cut(s)	2716
Kpn2I	TCCGGA	1 cut(s)	61
Ksp22I	TGATCA	2 cut(s)	283, 1324
LguI	GCTCTTC	2 cut(s)	2270, 2661
LmnI	GCTCC	8 cut(s)	64, 790, 1055, 1063, 1498, 1918, 2244, 2554
Lsp1109I	GCAGC	4 cut(s)	1521, 1543, 1963, 2734
LweI	GCATC	9 cut(s)	226, 337, 867, 1172, 1571, 1845, 1911, 2194, 2475
MabI	ACCWGGT	1 cut(s)	892
MaeI	CTAG	6 cut(s)	978, 1017, 1275, 1631, 1997, 2690
MaeII	ACGT	1 cut(s)	2716
MaeIII	GTNAC	6 cut(s)	904, 1394, 1501, 1726, 1809, 2101
MbiI	CCGCTC	1 cut(s)	172
MflI	RGATCY	5 cut(s)	814, 1037, 1734, 2615, 2631
MhlI	GDGCHC	6 cut(s)	41, 505, 599, 1060, 1495, 2367
MlsI	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
MluNI	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
MlyI	GAGTC	2 cut(s)	2, 2652
MmeI	TCCRAC	5 cut(s)	132, 157, 535, 1647, 2199
Mox20I	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
Mph1103I	ATGCAT	2 cut(s)	999, 1165
MroI	TCCGGA	1 cut(s)	61
MroXI	GAANNNNTTC	1 cut(s)	2279
MscI	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
MslI	CAYNNNNRTG	2 cut(s)	1716, 1722
Msp20I	TGGCCA	4 cut(s)	960, 1390, 1722, 2454
MspA1I	CMGCKG	2 cut(s)	1534, 2747
MspI	CCGG	8 cut(s)	62, 748, 858, 1213, 1304, 1732, 2523, 2532
MspR9I	CCNGG	9 cut(s)	859, 894, 1075, 1304, 1305, 1732, 2200, 2403, 2648
Mva1269I	GAATGC	1 cut(s)	418
MvaI	CCWGG	5 cut(s)	894, 1075, 2200, 2403, 2648
MvnI	CGCG	1 cut(s)	2110
MwoI	GCNNNNNNNGC	7 cut(s)	347, 727, 869, 1084, 1093, 1197, 1590
NciI	CCSGG	4 cut(s)	859, 1304, 1305, 1732
NcoI	CCATGG	1 cut(s)	2455
NdeI	CATATG	2 cut(s)	841, 1321
NheI	GCTAGC	2 cut(s)	977, 2689
NlaIV	GGNNCC	8 cut(s)	38, 457, 597, 639, 807, 1039, 1262, 1449
NmeAIII	GCCGAG	1 cut(s)	730
NmuCI	GTSAC	4 cut(s)	904, 1394, 1726, 2101
NruI	TCGCGA	1 cut(s)	2110
NsiI	ATGCAT	2 cut(s)	999, 1165
NspI	RCATGY	4 cut(s)	917, 1048, 1509, 1593
NspV	TTCGAA	1 cut(s)	532
PaeI	GCATGC	1 cut(s)	1593
PaqCI	CACCTGC	1 cut(s)	836
PciI	ACATGT	1 cut(s)	1505
PciSI	GCTCTTC	2 cut(s)	2270, 2661
PcsI	WCGNNNNNNNCGW	1 cut(s)	375
PctI	GAATGC	1 cut(s)	418
PdmI	GAANNNNTTC	1 cut(s)	2279
PfeI	GAWTC	6 cut(s)	52, 203, 1348, 2195, 2249, 2433
PflFI	GACNNNGTC	1 cut(s)	1470
PflMI	CCANNNNNTGG	2 cut(s)	1457, 1484
PfoI	TCCNGGA	2 cut(s)	2401, 2646
PinAI	ACCGGT	1 cut(s)	2531
PkrI	GCNGC	7 cut(s)	16, 1533, 1536, 1953, 2521, 2746, 2749
Ple19I	CGATCG	1 cut(s)	1030
PleI	GAGTC	2 cut(s)	2, 2651
PpsI	GAGTC	2 cut(s)	2, 2651
PscI	ACATGT	1 cut(s)	1505
Psp124BI	GAGCTC	2 cut(s)	505, 1060
Psp6I	CCWGG	5 cut(s)	892, 1073, 2198, 2401, 2646
PspEI	GGTNACC	1 cut(s)	2101
PspGI	CCWGG	5 cut(s)	892, 1073, 2198, 2401, 2646
PspN4I	GGNNCC	8 cut(s)	38, 457, 597, 639, 807, 1039, 1262, 1449
PspOMI	GGGCCC	1 cut(s)	595
PspPI	GGNCC	6 cut(s)	455, 595, 596, 890, 1316, 1823
PsrI	GAACNNNNNNTAC	2 cut(s)	1794, 1826
PstI	CTGCAG	2 cut(s)	1533, 2063
PsuI	RGATCY	5 cut(s)	814, 1037, 1734, 2615, 2631
PsyI	GACNNNGTC	1 cut(s)	1470
PvuI	CGATCG	1 cut(s)	1030
PvuII	CAGCTG	2 cut(s)	1534, 2747
RruI	TCGCGA	1 cut(s)	2110
RsaI	GTAC	4 cut(s)	686, 884, 1705, 1885
RsaNI	GTAC	4 cut(s)	685, 883, 1704, 1884
RseI	CAYNNNNRTG	2 cut(s)	1716, 1722
SacI	GAGCTC	2 cut(s)	505, 1060
SapI	GCTCTTC	2 cut(s)	2270, 2661
SatI	GCNGC	7 cut(s)	15, 1532, 1535, 1952, 2520, 2745, 2748
Sau96I	GGNCC	6 cut(s)	455, 595, 596, 890, 1316, 1823
ScaI	AGTACT	2 cut(s)	884, 1705
SchI	GAGTC	2 cut(s)	2, 2652
ScrFI	CCNGG	9 cut(s)	859, 894, 1075, 1304, 1305, 1732, 2200, 2403, 2648
SduI	GDGCHC	6 cut(s)	41, 505, 599, 1060, 1495, 2367
SexAI	ACCWGGT	1 cut(s)	892
SfaNI	GCATC	9 cut(s)	226, 337, 867, 1172, 1571, 1845, 1911, 2194, 2475
SfcI	CTRYAG	3 cut(s)	18, 1529, 2059
SfuI	TTCGAA	1 cut(s)	532
SinI	GGWCC	3 cut(s)	455, 890, 1316
SmaI	CCCGGG	1 cut(s)	1305
SmiMI	CAYNNNNRTG	2 cut(s)	1716, 1722
SmlI	CTYRAG	2 cut(s)	504, 2366
SmoI	CTYRAG	2 cut(s)	504, 2366
SpeI	ACTAGT	1 cut(s)	1630
SphI	GCATGC	1 cut(s)	1593
SsiI	CCGC	6 cut(s)	172, 1556, 1584, 1976, 2387, 2519
SspI	AATATT	1 cut(s)	2411
SspMI	CTAG	6 cut(s)	978, 1017, 1275, 1631, 1997, 2690
SstI	GAGCTC	2 cut(s)	505, 1060
StyD4I	CCNGG	9 cut(s)	857, 892, 1073, 1302, 1303, 1730, 2198, 2401, 2646
StyI	CCWWGG	2 cut(s)	2455, 2680
TaaI	ACNGT	9 cut(s)	22, 1052, 1116, 1345, 1600, 1703, 2395, 2516, 2701
TaiI	ACGT	1 cut(s)	2719
TaqI	TCGA	8 cut(s)	115, 369, 472, 532, 875, 1605, 2021, 2628
TaqII	GACCGA	2 cut(s)	714, 1304
TatI	WGTACW	2 cut(s)	882, 1703
TauI	GCSGC	1 cut(s)	2522
TfiI	GAWTC	6 cut(s)	52, 203, 1348, 2195, 2249, 2433
TscAI	CASTG	7 cut(s)	27, 95, 1057, 1230, 1246, 1462, 2185
TseFI	GTSAC	4 cut(s)	904, 1394, 1726, 2101
TseI	GCWGC	6 cut(s)	14, 1531, 1534, 1951, 2744, 2747
Tsp45I	GTSAC	4 cut(s)	904, 1394, 1726, 2101
TspDTI	ATGAA	9 cut(s)	407, 417, 828, 978, 1415, 1856, 1863, 2241, 2744
TspMI	CCCGGG	1 cut(s)	1303
TspRI	CASTG	7 cut(s)	27, 95, 1057, 1230, 1246, 1462, 2185
Tth111I	GACNNNGTC	1 cut(s)	1470
Van91I	CCANNNNNTGG	2 cut(s)	1457, 1484
VpaK11BI	GGWCC	3 cut(s)	455, 890, 1316
XagI	CCTNNNNNAGG	2 cut(s)	1072, 2651
XapI	RAATTY	5 cut(s)	442, 1524, 1931, 1939, 2344
XbaI	TCTAGA	1 cut(s)	1996
XceI	RCATGY	4 cut(s)	917, 1048, 1509, 1593
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1049
XmaI	CCCGGG	1 cut(s)	1303
XmnI	GAANNNNTTC	1 cut(s)	2279
XspI	CTAG	6 cut(s)	978, 1017, 1275, 1631, 1997, 2690
ZrmI	AGTACT	2 cut(s)	884, 1705
Zsp2I	ATGCAT	2 cut(s)	999, 1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.