Probable zinc-ribbon domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G46380 AT2G46380 AT3G61670 AT3G61670 |
| fragaria_vesca | FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 |
| malus_domestica | MD01G1076900.v1.1 MD07G1146100.v1.1 MD07G1146300.v1.1 |
| prunus_persica | Prupe.2G184400_v2.0.a1 |
| pyrus_communis | pycom01g10600 pycom07g14570 |
| rosa_chinensis | RchiOBHm_Chr1g0359001 |
| rosa_laevigata | RLG00000027910 |
| rosa_multiflora | Rmu_sc0001176.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00297470 |
| rosa_rugosa | Rorug01G0267000 |
| rosa_samantha | Rh1AG280300 Rh1BG247400 Rh1CG264700 Rh1DG275800 |
| rosa_wichuraiana | Rw1G024920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 202 |
| Acc36I | ACCTGC | 2 cut(s) | 202, 769 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 440 |
| AccII | CGCG | 1 cut(s) | 1066 |
| AciI | CCGC | 2 cut(s) | 512, 569 |
| AclWI | GGATC | 3 cut(s) | 86, 698, 1185 |
| AcoI | YGGCCR | 1 cut(s) | 418 |
| AcsI | RAATTY | 4 cut(s) | 480, 887, 968, 1445 |
| AcuI | CTGAAG | 1 cut(s) | 1222 |
| AfaI | GTAC | 5 cut(s) | 405, 504, 841, 1127, 1348 |
| AgeI | ACCGGT | 1 cut(s) | 1616 |
| AgsI | TTSAA | 9 cut(s) | 479, 576, 640, 789, 882, 968, 1305, 1442, 1450 |
| AjnI | CCWGG | 7 cut(s) | 29, 260, 940, 1154, 1357, 1411, 1602 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 363, 395 |
| Alw21I | GWGCWC | 3 cut(s) | 16, 451, 1323 |
| Alw26I | GTCTC | 1 cut(s) | 1079 |
| AlwI | GGATC | 3 cut(s) | 86, 698, 1185 |
| AoxI | GGCC | 6 cut(s) | 271, 344, 418, 778, 1329, 1408 |
| ApeKI | GCWGC | 5 cut(s) | 197, 907, 1475, 1700, 1703 |
| ApoI | RAATTY | 4 cut(s) | 480, 887, 968, 1445 |
| AsiGI | ACCGGT | 1 cut(s) | 1616 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1235 |
| AspS9I | GGNCC | 5 cut(s) | 272, 345, 677, 779, 1409 |
| AsuC2I | CCSGG | 1 cut(s) | 688 |
| AsuHPI | GGTGA | 6 cut(s) | 119, 676, 939, 1069, 1508, 1631 |
| AvaII | GGWCC | 1 cut(s) | 677 |
| BanII | GRGCYC | 2 cut(s) | 16, 1323 |
| BauI | CACGAG | 1 cut(s) | 806 |
| BbsI | GAAGAC | 2 cut(s) | 422, 1617 |
| Bbv12I | GWGCWC | 3 cut(s) | 16, 451, 1323 |
| BbvI | GCAGC | 4 cut(s) | 184, 919, 1487, 1690 |
| BccI | CCATC | 7 cut(s) | 255, 259, 336, 848, 1099, 1333, 1362 |
| BciT130I | CCWGG | 7 cut(s) | 31, 262, 942, 1156, 1359, 1413, 1604 |
| BclI | TGATCA | 1 cut(s) | 280 |
| BcnI | CCSGG | 1 cut(s) | 688 |
| BcoDI | GTCTC | 1 cut(s) | 1079 |
| BfaI | CTAG | 2 cut(s) | 231, 1094 |
| BfmI | CTRYAG | 2 cut(s) | 953, 1015 |
| BfuAI | ACCTGC | 2 cut(s) | 202, 769 |
| BglII | AGATCT | 2 cut(s) | 1571, 1587 |
| BisI | GCNGC | 5 cut(s) | 198, 908, 1476, 1701, 1704 |
| BlsI | GCNGC | 5 cut(s) | 199, 909, 1477, 1702, 1705 |
| BmcAI | AGTACT | 2 cut(s) | 504, 1127 |
| Bme1390I | CCNGG | 8 cut(s) | 31, 262, 688, 942, 1156, 1359, 1413, 1604 |
| Bme18I | GGWCC | 1 cut(s) | 677 |
| BmgT120I | GGNCC | 5 cut(s) | 272, 345, 677, 779, 1409 |
| BmiI | GGNNCC | 1 cut(s) | 218 |
| BmrFI | CCNGG | 8 cut(s) | 31, 262, 688, 942, 1156, 1359, 1413, 1604 |
| BmrI | ACTGGG | 3 cut(s) | 342, 831, 1146 |
| BmsI | GCATC | 4 cut(s) | 801, 867, 1150, 1431 |
| BmuI | ACTGGG | 3 cut(s) | 342, 831, 1146 |
| BpiI | GAAGAC | 2 cut(s) | 422, 1617 |
| BpmI | CTGGAG | 2 cut(s) | 855, 1500 |
| BpuEI | CTTGAG | 1 cut(s) | 1307 |
| BpuMI | CCSGG | 1 cut(s) | 688 |
| Bsa29I | ATCGAT | 1 cut(s) | 561 |
| BsaJI | CCNNGG | 7 cut(s) | 29, 260, 293, 673, 1155, 1411, 1636 |
| BsaWI | WCCGGW | 2 cut(s) | 1562, 1616 |
| Bse118I | RCCGGY | 3 cut(s) | 168, 420, 1616 |
| Bse1I | ACTGG | 8 cut(s) | 185, 348, 411, 837, 872, 1141, 1492, 1542 |
| BseBI | CCWGG | 7 cut(s) | 31, 262, 942, 1156, 1359, 1413, 1604 |
| BseCI | ATCGAT | 1 cut(s) | 561 |
| BseDI | CCNNGG | 7 cut(s) | 29, 260, 293, 673, 1155, 1411, 1636 |
| BseGI | GGATG | 9 cut(s) | 19, 247, 270, 856, 858, 1114, 1165, 1354, 1612 |
| BseMII | CTCAG | 6 cut(s) | 192, 837, 1041, 1092, 1478, 1605 |
| BseNI | ACTGG | 8 cut(s) | 185, 348, 411, 837, 872, 1141, 1492, 1542 |
| BseRI | GAGGAG | 6 cut(s) | 6, 659, 697, 921, 964, 1187 |
| BseXI | GCAGC | 4 cut(s) | 184, 919, 1487, 1690 |
| BsgI | GTGCAG | 1 cut(s) | 1494 |
| Bsh1236I | CGCG | 1 cut(s) | 1066 |
| BshFI | GGCC | 6 cut(s) | 273, 346, 420, 780, 1331, 1410 |
| BshTI | ACCGGT | 1 cut(s) | 1616 |
| BshVI | ATCGAT | 1 cut(s) | 561 |
| BsiHKAI | GWGCWC | 3 cut(s) | 16, 451, 1323 |
| BsiSI | CCGG | 5 cut(s) | 169, 421, 688, 1563, 1617 |
| BsmAI | GTCTC | 1 cut(s) | 1079 |
| BsmI | GAATGC | 1 cut(s) | 1300 |
| BsnI | GGCC | 6 cut(s) | 273, 346, 420, 780, 1331, 1410 |
| Bsp1286I | GDGCHC | 3 cut(s) | 16, 451, 1323 |
| Bsp143I | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| Bsp19I | CCATGG | 1 cut(s) | 673 |
| Bsp68I | TCGCGA | 1 cut(s) | 1066 |
| BspACI | CCGC | 2 cut(s) | 512, 569 |
| BspANI | GGCC | 6 cut(s) | 273, 346, 420, 780, 1331, 1410 |
| BspCNI | CTCAG | 6 cut(s) | 191, 838, 1040, 1093, 1477, 1604 |
| BspDI | ATCGAT | 1 cut(s) | 561 |
| BspFNI | CGCG | 1 cut(s) | 1066 |
| BspLI | GGNNCC | 1 cut(s) | 218 |
| BspMAI | CTGCAG | 1 cut(s) | 1019 |
| BspMI | ACCTGC | 2 cut(s) | 202, 769 |
| BspPI | GGATC | 3 cut(s) | 86, 698, 1185 |
| BspQI | GCTCTTC | 2 cut(s) | 1226, 1617 |
| BsrFI | RCCGGY | 3 cut(s) | 168, 420, 1616 |
| BsrI | ACTGG | 8 cut(s) | 185, 348, 411, 837, 872, 1141, 1492, 1542 |
| BssAI | RCCGGY | 3 cut(s) | 168, 420, 1616 |
| BssECI | CCNNGG | 7 cut(s) | 29, 260, 293, 673, 1155, 1411, 1636 |
| BssMI | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| BssSI | CACGAG | 1 cut(s) | 806 |
| BssT1I | CCWWGG | 2 cut(s) | 673, 1636 |
| Bst2BI | CACGAG | 1 cut(s) | 806 |
| Bst2UI | CCWGG | 7 cut(s) | 31, 262, 942, 1156, 1359, 1413, 1604 |
| Bst6I | CTCTTC | 2 cut(s) | 1226, 1617 |
| BstC8I | GCNNGC | 6 cut(s) | 422, 510, 547, 800, 1643, 1647 |
| BstDEI | CTNAG | 6 cut(s) | 178, 846, 1027, 1101, 1464, 1591 |
| BstDSI | CCRYGG | 1 cut(s) | 673 |
| BstEII | GGTNACC | 1 cut(s) | 1057 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 28 |
| BstF5I | GGATG | 9 cut(s) | 19, 247, 270, 856, 858, 1114, 1165, 1354, 1612 |
| BstFNI | CGCG | 1 cut(s) | 1066 |
| BstKTI | GATC | 9 cut(s) | 94, 283, 561, 693, 1033, 1180, 1315, 1574, 1590 |
| BstMAI | GTCTC | 1 cut(s) | 1079 |
| BstMBI | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 153, 875, 1023 |
| BstNI | CCWGG | 7 cut(s) | 31, 262, 942, 1156, 1359, 1413, 1604 |
| BstNSI | RCATGY | 2 cut(s) | 465, 549 |
| BstPI | GGTNACC | 1 cut(s) | 1057 |
| BstSCI | CCNGG | 8 cut(s) | 29, 260, 686, 940, 1154, 1357, 1411, 1602 |
| BstSFI | CTRYAG | 2 cut(s) | 953, 1015 |
| BstUI | CGCG | 1 cut(s) | 1066 |
| BstV1I | GCAGC | 4 cut(s) | 184, 919, 1487, 1690 |
| BstV2I | GAAGAC | 2 cut(s) | 422, 1617 |
| BstX2I | RGATCY | 3 cut(s) | 690, 1571, 1587 |
| BstYI | RGATCY | 3 cut(s) | 690, 1571, 1587 |
| Bsu15I | ATCGAT | 1 cut(s) | 561 |
| BsuRI | GGCC | 6 cut(s) | 273, 346, 420, 780, 1331, 1410 |
| BsuTUI | ATCGAT | 1 cut(s) | 561 |
| BtgI | CCRYGG | 1 cut(s) | 673 |
| BtgZI | GCGATG | 2 cut(s) | 439, 550 |
| BtsCI | GGATG | 9 cut(s) | 19, 247, 270, 856, 858, 1114, 1165, 1354, 1612 |
| BtsIMutI | CAGTG | 4 cut(s) | 13, 186, 355, 418 |
| BtuMI | TCGCGA | 1 cut(s) | 1066 |
| BveI | ACCTGC | 2 cut(s) | 202, 769 |
| Cac8I | GCNNGC | 6 cut(s) | 422, 510, 547, 800, 1643, 1647 |
| Cfr10I | RCCGGY | 3 cut(s) | 168, 420, 1616 |
| Cfr13I | GGNCC | 5 cut(s) | 272, 345, 677, 779, 1409 |
| ClaI | ATCGAT | 1 cut(s) | 561 |
| CseI | GACGC | 1 cut(s) | 108 |
| Csp6I | GTAC | 5 cut(s) | 404, 503, 840, 1126, 1347 |
| CspAI | ACCGGT | 1 cut(s) | 1616 |
| CviAII | CATG | 9 cut(s) | 241, 320, 462, 546, 599, 674, 1402, 1459, 1684 |
| CviQI | GTAC | 5 cut(s) | 404, 503, 840, 1126, 1347 |
| DdeI | CTNAG | 6 cut(s) | 178, 846, 1027, 1101, 1464, 1591 |
| DpnI | GATC | 9 cut(s) | 93, 282, 560, 692, 1032, 1179, 1314, 1573, 1589 |
| DpnII | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| DraI | TTTAAA | 1 cut(s) | 1080 |
| EaeI | YGGCCR | 1 cut(s) | 418 |
| Eam1104I | CTCTTC | 2 cut(s) | 1226, 1617 |
| EarI | CTCTTC | 2 cut(s) | 1226, 1617 |
| Ecl136II | GAGCTC | 2 cut(s) | 14, 1321 |
| Eco130I | CCWWGG | 2 cut(s) | 673, 1636 |
| Eco24I | GRGCYC | 2 cut(s) | 16, 1323 |
| Eco47I | GGWCC | 1 cut(s) | 677 |
| Eco53kI | GAGCTC | 2 cut(s) | 14, 1321 |
| Eco57I | CTGAAG | 1 cut(s) | 1222 |
| Eco91I | GGTNACC | 1 cut(s) | 1057 |
| EcoICRI | GAGCTC | 2 cut(s) | 14, 1321 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 28 |
| EcoO65I | GGTNACC | 1 cut(s) | 1057 |
| EcoRI | GAATTC | 3 cut(s) | 887, 968, 1445 |
| EcoRII | CCWGG | 7 cut(s) | 29, 260, 940, 1154, 1357, 1411, 1602 |
| EcoT14I | CCWWGG | 2 cut(s) | 673, 1636 |
| EcoT38I | GRGCYC | 2 cut(s) | 16, 1323 |
| ErhI | CCWWGG | 2 cut(s) | 673, 1636 |
| FaeI | CATG | 9 cut(s) | 244, 323, 465, 549, 602, 677, 1405, 1462, 1687 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 492, 524, 1220, 1252 |
| FatI | CATG | 9 cut(s) | 240, 319, 461, 545, 598, 673, 1401, 1458, 1683 |
| FauNDI | CATATG | 1 cut(s) | 277 |
| FbaI | TGATCA | 1 cut(s) | 280 |
| Fnu4HI | GCNGC | 5 cut(s) | 198, 908, 1476, 1701, 1704 |
| FokI | GGATG | 9 cut(s) | 6, 234, 277, 845, 863, 1121, 1172, 1341, 1619 |
| FriOI | GRGCYC | 2 cut(s) | 16, 1323 |
| Fsp4HI | GCNGC | 5 cut(s) | 198, 908, 1476, 1701, 1704 |
| FspBI | CTAG | 2 cut(s) | 231, 1094 |
| GluI | GCNGC | 5 cut(s) | 198, 908, 1476, 1701, 1704 |
| GsuI | CTGGAG | 2 cut(s) | 855, 1500 |
| HaeIII | GGCC | 6 cut(s) | 273, 346, 420, 780, 1331, 1410 |
| HapII | CCGG | 5 cut(s) | 169, 421, 688, 1563, 1617 |
| HgaI | GACGC | 1 cut(s) | 108 |
| Hin1II | CATG | 9 cut(s) | 244, 323, 465, 549, 602, 677, 1405, 1462, 1687 |
| HindIII | AAGCTT | 3 cut(s) | 817, 1643, 1688 |
| HinfI | GANTC | 6 cut(s) | 304, 896, 1151, 1205, 1389, 1599 |
| HpaII | CCGG | 5 cut(s) | 169, 421, 688, 1563, 1617 |
| HphI | GGTGA | 6 cut(s) | 119, 676, 939, 1069, 1508, 1631 |
| Hpy166II | GTNNAC | 2 cut(s) | 774, 947 |
| Hpy188I | TCNGA | 8 cut(s) | 297, 625, 712, 847, 1030, 1263, 1382, 1467 |
| Hpy8I | GTNNAC | 2 cut(s) | 774, 947 |
| Hpy99I | CGWCG | 3 cut(s) | 52, 124, 625 |
| HpyAV | CCTTC | 6 cut(s) | 945, 1000, 1033, 1321, 1500, 1657 |
| HpyCH4IV | ACGT | 2 cut(s) | 987, 1672 |
| HpyCH4V | TGCA | 9 cut(s) | 4, 487, 545, 602, 814, 1017, 1163, 1475, 1706 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 153, 875, 1023 |
| HpyF3I | CTNAG | 6 cut(s) | 178, 846, 1027, 1101, 1464, 1591 |
| HpySE526I | ACGT | 2 cut(s) | 987, 1672 |
| Hsp92II | CATG | 9 cut(s) | 244, 323, 465, 549, 602, 677, 1405, 1462, 1687 |
| KroI | GCCGGC | 1 cut(s) | 420 |
| KroNI | GCCGGC | 1 cut(s) | 422 |
| Ksp22I | TGATCA | 1 cut(s) | 280 |
| Kzo9I | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| LguI | GCTCTTC | 2 cut(s) | 1226, 1617 |
| LmnI | GCTCC | 6 cut(s) | 11, 19, 249, 454, 874, 1510 |
| Lsp1109I | GCAGC | 4 cut(s) | 184, 919, 1487, 1690 |
| LweI | GCATC | 4 cut(s) | 801, 867, 1150, 1431 |
| MaeI | CTAG | 2 cut(s) | 231, 1094 |
| MaeII | ACGT | 2 cut(s) | 987, 1672 |
| MaeIII | GTNAC | 4 cut(s) | 350, 467, 682, 1057 |
| MalI | GATC | 9 cut(s) | 93, 282, 560, 692, 1032, 1179, 1314, 1573, 1589 |
| MboI | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| MboII | GAAGA | 6 cut(s) | 422, 819, 1243, 1454, 1622, 1634 |
| MflI | RGATCY | 3 cut(s) | 690, 1571, 1587 |
| MhlI | GDGCHC | 3 cut(s) | 16, 451, 1323 |
| MluCI | AATT | 5 cut(s) | 480, 724, 887, 968, 1445 |
| MlyI | GAGTC | 1 cut(s) | 1608 |
| MmeI | TCCRAC | 1 cut(s) | 603 |
| MroNI | GCCGGC | 1 cut(s) | 420 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1235 |
| MseI | TTAA | 6 cut(s) | 357, 630, 1079, 1119, 1227, 1293 |
| MslI | CAYNNNNRTG | 2 cut(s) | 672, 1521 |
| MspA1I | CMGCKG | 2 cut(s) | 1478, 1703 |
| MspI | CCGG | 5 cut(s) | 169, 421, 688, 1563, 1617 |
| MspR9I | CCNGG | 8 cut(s) | 31, 262, 688, 942, 1156, 1359, 1413, 1604 |
| Mva1269I | GAATGC | 1 cut(s) | 1300 |
| MvaI | CCWGG | 7 cut(s) | 31, 262, 942, 1156, 1359, 1413, 1604 |
| MvnI | CGCG | 1 cut(s) | 1066 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 40, 49, 153, 875, 1023 |
| NaeI | GCCGGC | 1 cut(s) | 422 |
| NciI | CCSGG | 1 cut(s) | 688 |
| NcoI | CCATGG | 1 cut(s) | 673 |
| NdeI | CATATG | 1 cut(s) | 277 |
| NdeII | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| NgoMIV | GCCGGC | 1 cut(s) | 420 |
| NlaIII | CATG | 9 cut(s) | 244, 323, 465, 549, 602, 677, 1405, 1462, 1687 |
| NlaIV | GGNNCC | 1 cut(s) | 218 |
| NmuCI | GTSAC | 3 cut(s) | 350, 682, 1057 |
| NruI | TCGCGA | 1 cut(s) | 1066 |
| NspI | RCATGY | 2 cut(s) | 465, 549 |
| PaeI | GCATGC | 1 cut(s) | 549 |
| PaqCI | CACCTGC | 1 cut(s) | 202 |
| PciSI | GCTCTTC | 2 cut(s) | 1226, 1617 |
| PctI | GAATGC | 1 cut(s) | 1300 |
| PdiI | GCCGGC | 1 cut(s) | 422 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1235 |
| PfeI | GAWTC | 5 cut(s) | 304, 896, 1151, 1205, 1389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 440 |
| PfoI | TCCNGGA | 2 cut(s) | 1357, 1602 |
| PinAI | ACCGGT | 1 cut(s) | 1616 |
| PkrI | GCNGC | 5 cut(s) | 199, 909, 1477, 1702, 1705 |
| PleI | GAGTC | 1 cut(s) | 1607 |
| PpsI | GAGTC | 1 cut(s) | 1607 |
| Psp124BI | GAGCTC | 2 cut(s) | 16, 1323 |
| Psp6I | CCWGG | 7 cut(s) | 29, 260, 940, 1154, 1357, 1411, 1602 |
| PspEI | GGTNACC | 1 cut(s) | 1057 |
| PspGI | CCWGG | 7 cut(s) | 29, 260, 940, 1154, 1357, 1411, 1602 |
| PspN4I | GGNNCC | 1 cut(s) | 218 |
| PspPI | GGNCC | 5 cut(s) | 272, 345, 677, 779, 1409 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 750, 782 |
| PstI | CTGCAG | 1 cut(s) | 1019 |
| PsuI | RGATCY | 3 cut(s) | 690, 1571, 1587 |
| PvuII | CAGCTG | 2 cut(s) | 1478, 1703 |
| RruI | TCGCGA | 1 cut(s) | 1066 |
| RsaI | GTAC | 5 cut(s) | 405, 504, 841, 1127, 1348 |
| RsaNI | GTAC | 5 cut(s) | 404, 503, 840, 1126, 1347 |
| RseI | CAYNNNNRTG | 2 cut(s) | 672, 1521 |
| SacI | GAGCTC | 2 cut(s) | 16, 1323 |
| SapI | GCTCTTC | 2 cut(s) | 1226, 1617 |
| SaqAI | TTAA | 6 cut(s) | 357, 630, 1079, 1119, 1227, 1293 |
| SatI | GCNGC | 5 cut(s) | 198, 908, 1476, 1701, 1704 |
| Sau3AI | GATC | 9 cut(s) | 91, 280, 558, 690, 1030, 1177, 1312, 1571, 1587 |
| Sau96I | GGNCC | 5 cut(s) | 272, 345, 677, 779, 1409 |
| ScaI | AGTACT | 2 cut(s) | 504, 1127 |
| SchI | GAGTC | 1 cut(s) | 1608 |
| ScrFI | CCNGG | 8 cut(s) | 31, 262, 688, 942, 1156, 1359, 1413, 1604 |
| SduI | GDGCHC | 3 cut(s) | 16, 451, 1323 |
| SfaNI | GCATC | 4 cut(s) | 801, 867, 1150, 1431 |
| SfcI | CTRYAG | 2 cut(s) | 953, 1015 |
| SgrAI | CRCCGGYG | 2 cut(s) | 168, 1616 |
| SinI | GGWCC | 1 cut(s) | 677 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 672, 1521 |
| SmlI | CTYRAG | 1 cut(s) | 1322 |
| SmoI | CTYRAG | 1 cut(s) | 1322 |
| SphI | GCATGC | 1 cut(s) | 549 |
| Sse9I | AATT | 5 cut(s) | 480, 724, 887, 968, 1445 |
| SsiI | CCGC | 2 cut(s) | 512, 569 |
| SspI | AATATT | 1 cut(s) | 1367 |
| SspMI | CTAG | 2 cut(s) | 231, 1094 |
| SstI | GAGCTC | 2 cut(s) | 16, 1323 |
| StyD4I | CCNGG | 8 cut(s) | 29, 260, 686, 940, 1154, 1357, 1411, 1602 |
| StyI | CCWWGG | 2 cut(s) | 673, 1636 |
| TaiI | ACGT | 2 cut(s) | 990, 1675 |
| TaqI | TCGA | 4 cut(s) | 302, 561, 977, 1584 |
| TasI | AATT | 5 cut(s) | 480, 724, 887, 968, 1445 |
| TatI | WGTACW | 2 cut(s) | 502, 1125 |
| TfiI | GAWTC | 5 cut(s) | 304, 896, 1151, 1205, 1389 |
| Tru1I | TTAA | 6 cut(s) | 357, 630, 1079, 1119, 1227, 1293 |
| Tru9I | TTAA | 6 cut(s) | 357, 630, 1079, 1119, 1227, 1293 |
| TscAI | CASTG | 4 cut(s) | 13, 186, 355, 418 |
| TseFI | GTSAC | 3 cut(s) | 350, 682, 1057 |
| TseI | GCWGC | 5 cut(s) | 197, 907, 1475, 1700, 1703 |
| Tsp45I | GTSAC | 3 cut(s) | 350, 682, 1057 |
| TspDTI | ATGAA | 7 cut(s) | 308, 371, 812, 819, 880, 1623, 1700 |
| TspGWI | ACGGA | 3 cut(s) | 84, 377, 609 |
| TspRI | CASTG | 4 cut(s) | 13, 186, 355, 418 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 440 |
| VpaK11BI | GGWCC | 1 cut(s) | 677 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 28 |
| XapI | RAATTY | 4 cut(s) | 480, 887, 968, 1445 |
| XceI | RCATGY | 2 cut(s) | 465, 549 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1235 |
| XspI | CTAG | 2 cut(s) | 231, 1094 |
| ZrmI | AGTACT | 2 cut(s) | 504, 1127 |