Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0007002

Physical Location & Seq

Genomic Coordinates Reverse (-)

37908106 .. 37910282

Gene Structure 2177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0267000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGCTGCCAGGTTGAGATCCCCGATGATCGGAATTGATCTTGGAACCGGATACTCGAGCGTGGGCGTCTGGAATAGAGAGAGTAACTGTGTGGAAATCATCGCCGACAAGAAGGGCAACACCAGGATTCCGAATTCTATGGTGTTTACCAAGACTCACTGTCAGTTTGGTGTTTCTGGCGACATGGAGGACGAGCTTTCAATCGATCCCGACAACACCATAGTCTCCAATGTCAAAAGGTTAATAGGCAGGAGAGACAAAAGCCTTATATTCAGGAAATTTCCATATATTCGGAGTGATTTGCATCAATATCCTTTCAAGGTCACTGCCAACACTAGTGGCATGCCTACGATCGCATTTAATTACAAGGGAGAACCGAAACAGTTGTATGTCGAAGCAATTTCTGCCATGGTGGTCAGCAATTTGGTTGAGATTGTTAAGGCTCATCCTAGCATCACGCATGTGAGCGATGCAGTCATTACTGTACCTTGCTACTTCACCACCTCCCAGAGAGGTGCTACCATAGACGCTGCACGCATTGCCGGCCTACGATACGTGCATATTGTCAATGACTCCACTGCTGCCGCCCTTGCGTATGGTTTTAAAAGTAAAGTGCATGCAGAGCGCGAGCAGAAGAACCTTTTGGTTTTTGATCTTGGGGCGGGGAGTTTAGACGTGTCTCTTGTTAGGATTGAGAACGGTAGATATCAGGTTATAGCCTGTATTGGAGACACACACTTGGGTGGAAATGATTTTGACAAGAGAATGGTAGATCTCTTTGTGCAAGAGTTCCAGAATGATCACAAGGAGGACATCAGTGCAAATCCAAGGGCTGTTAGGAGGTTAGCAATAGCCTATGAGAGTGCTAAGAGGACTCTGTCATCCAAAGAAATAAACCAGGCTACTATTCATATTGATTCGCTGGTCGATGGTATCAACTTCGATAAAACTATTACTAGGGACATATGTGATCAGATAAACATGGATTTGTACCACAAGTGTGTAAATCTAGTTGATAAATGTTTAAAAGACGCTGCTATAGACACACATAGTGTCTCCGATGTTTTGCTCCTAGGTGGTTCCTCAAAGATTCCTATACTTCAAGAACTTCTGGAATCTTTCTTCGAGGGGACTCAAGTGAGCATCCACAGAGACGAAGAAGAATTGGTCGCTTATGGTGCAGCTCTTTTGGGTGCAATGTTAACCATTGACACAGATGAGGTGCAATCTCTGTCAATCTGTGATGTAGCTACACTGTCTGTGAGTCGTGTAACCTCTAGCCCGATAAATCGAATACTACCTGCAAAACTAAAGAAGTTAGATGTTTTCAACAGGAAGACCGCCATTTTTCCAAGGAAGACTCCCCTCCCAACCAAAAAGGAACAAAATTACTCCATCTCCTCACATAACTTTTGGTTCTATAGAGAGAAAAGGTACAAGTTGACTCTTTATGAGGGTCATGACCAGATGGATCTTTTGGGGACATTCGAGTTTACTGGAATTCCAAAGGGTGCTTCTAACATCACTGTTTCGTTTGAAATAAACCACAGTGGAATCTTGTTTGTTACTGCCGAGGCTGACAATGTAAGGATTAAGGTAACTTGTAAGAGAGGCCGATTGACCGACTACCTCGATGTGGACCATCTCAACTTAGAGGTCAGGAAGTACATGCAACCAGTAGTGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zinc_ribbon_12

Protein Analysis

562

Amino Acids

62.86

Weight (kDa)

6.97

Isoelectric Point (pI)

29.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	9 - 532	3.1e-113	Hsp70 protein
MreB_Mbl	PF06723	143 - 396	1.3e-11	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46380 AT2G46380 AT3G61670 AT3G61670
fragaria_vesca	FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060 FvH4_7g16060
malus_domestica	MD01G1076900.v1.1 MD07G1146100.v1.1 MD07G1146300.v1.1
prunus_persica	Prupe.2G184400_v2.0.a1
pyrus_communis	pycom01g10600 pycom07g14570
rosa_chinensis	RchiOBHm_Chr1g0359001
rosa_laevigata	RLG00000027910
rosa_multiflora	Rmu_sc0001176.1_g000013
rosa_roxburghii	Rroxscaffold_4G00297470
rosa_rugosa	Rorug01G0267000
rosa_samantha	Rh1AG280300 Rh1BG247400 Rh1CG264700 Rh1DG275800
rosa_wichuraiana	Rw1G024920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1309
AccII	CGCG	1 cut(s)	627
AciI	CCGC	3 cut(s)	585, 662, 1341
AclWI	GGATC	3 cut(s)	12, 200, 1479
AcsI	RAATTY	3 cut(s)	133, 278, 1500
AcyI	GRCGYC	1 cut(s)	66
AdeI	CACNNNGTG	1 cut(s)	1052
AfaI	GTAC	5 cut(s)	486, 992, 1436, 1667, 1685
AfiI	CCNNNNNNNGG	2 cut(s)	29, 1636
AflIII	ACRYGT	1 cut(s)	675
AgsI	TTSAA	5 cut(s)	201, 319, 1103, 1330, 1538
AhdI	GACNNNNNGTC	1 cut(s)	159
AhlI	ACTAGT	1 cut(s)	335
AjiI	CACGTC	1 cut(s)	676
AjnI	CCWGG	3 cut(s)	8, 122, 897
AjuI	GAANNNNNNNTTGG	4 cut(s)	626, 658, 1498, 1530
AleI	CACNNNNGTG	3 cut(s)	461, 741, 999
AluBI	AGCT	3 cut(s)	196, 1184, 1250
AluI	AGCT	3 cut(s)	196, 1184, 1250
Alw26I	GTCTC	6 cut(s)	229, 249, 684, 723, 1060, 1146
AlwI	GGATC	3 cut(s)	12, 200, 1479
Ama87I	CYCGRG	1 cut(s)	55
AoxI	GGCC	2 cut(s)	544, 1612
ApeKI	GCWGC	5 cut(s)	5, 530, 581, 1034, 1181
ApoI	RAATTY	3 cut(s)	133, 278, 1500
AspA2I	CCTAGG	1 cut(s)	1072
AspLEI	GCGC	1 cut(s)	627
AspS9I	GGNCC	1 cut(s)	1639
AsuHPI	GGTGA	1 cut(s)	490
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	1 cut(s)	1639
AvrII	CCTAGG	1 cut(s)	1072
BbsI	GAAGAC	2 cut(s)	1343, 1364
BbvI	GCAGC	4 cut(s)	517, 568, 1021, 1193
BccI	CCATC	4 cut(s)	923, 1403, 1462, 1650
BciT130I	CCWGG	3 cut(s)	10, 124, 899
BciVI	GTATCC	1 cut(s)	44
BclI	TGATCA	2 cut(s)	799, 970
BcoDI	GTCTC	6 cut(s)	229, 249, 684, 723, 1060, 1146
BcuI	ACTAGT	1 cut(s)	335
BfaI	CTAG	6 cut(s)	336, 450, 957, 1010, 1073, 1278
BfmI	CTRYAG	2 cut(s)	1038, 1420
BfuAI	ACCTGC	1 cut(s)	1309
BfuI	GTATCC	1 cut(s)	44
BglII	AGATCT	1 cut(s)	772
BisI	GCNGC	6 cut(s)	6, 531, 582, 585, 1035, 1182
BlnI	CCTAGG	1 cut(s)	1072
BlsI	GCNGC	6 cut(s)	7, 532, 583, 586, 1036, 1183
Bme1390I	CCNGG	3 cut(s)	10, 124, 899
Bme18I	GGWCC	1 cut(s)	1639
BmeRI	GACNNNNNGTC	1 cut(s)	159
BmeT110I	CYCGRG	1 cut(s)	55
BmgBI	CACGTC	1 cut(s)	676
BmgT120I	GGNCC	1 cut(s)	1639
BmiI	GGNNCC	2 cut(s)	46, 1081
BmrFI	CCNGG	3 cut(s)	10, 124, 899
BmsI	GCATC	4 cut(s)	313, 460, 462, 1152
BpiI	GAAGAC	2 cut(s)	1343, 1364
BpuEI	CTTGAG	1 cut(s)	1119
Bsa29I	ATCGAT	1 cut(s)	204
BsaAI	YACGTR	1 cut(s)	556
BsaBI	GATNNNNATC	1 cut(s)	303
BsaHI	GRCGYC	1 cut(s)	66
BsaJI	CCNNGG	5 cut(s)	408, 827, 1072, 1352, 1572
BsaWI	WCCGGW	1 cut(s)	47
BsaXI	ACNNNNNCTCC	2 cut(s)	1382, 1412
Bsc4I	CCNNNNNNNGG	2 cut(s)	29, 1636
Bse118I	RCCGGY	1 cut(s)	542
Bse1I	ACTGG	2 cut(s)	1501, 1676
Bse3DI	GCAATG	2 cut(s)	537, 1203
Bse8I	GATNNNNATC	1 cut(s)	303
BseBI	CCWGG	3 cut(s)	10, 124, 899
BseCI	ATCGAT	1 cut(s)	204
BseDI	CCNNGG	5 cut(s)	408, 827, 1072, 1352, 1572
BseGI	GGATG	3 cut(s)	445, 881, 1143
BseJI	GATNNNNATC	1 cut(s)	303
BseLI	CCNNNNNNNGG	2 cut(s)	29, 1636
BseMI	GCAATG	2 cut(s)	537, 1203
BseNI	ACTGG	2 cut(s)	1501, 1676
BseRI	GAGGAG	1 cut(s)	1390
BseXI	GCAGC	4 cut(s)	517, 568, 1021, 1193
BsgI	GTGCAG	2 cut(s)	516, 1200
Bsh1236I	CGCG	1 cut(s)	627
Bsh1285I	CGRYCG	1 cut(s)	354
BshFI	GGCC	2 cut(s)	546, 1614
BshVI	ATCGAT	1 cut(s)	204
BsiEI	CGRYCG	1 cut(s)	354
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	2 cut(s)	48, 543
BslFI	GGGAC	3 cut(s)	974, 1144, 1495
BslI	CCNNNNNNNGG	2 cut(s)	29, 1636
BsmAI	GTCTC	6 cut(s)	229, 249, 684, 723, 1060, 1146
BsmBI	CGTCTC	1 cut(s)	1146
BsmFI	GGGAC	3 cut(s)	974, 1144, 1495
BsnI	GGCC	2 cut(s)	546, 1614
BsoBI	CYCGRG	1 cut(s)	55
Bsp19I	CCATGG	1 cut(s)	408
BspACI	CCGC	3 cut(s)	585, 662, 1341
BspANI	GGCC	2 cut(s)	546, 1614
BspDI	ATCGAT	1 cut(s)	204
BspFNI	CGCG	1 cut(s)	627
BspHI	TCATGA	1 cut(s)	1459
BspLI	GGNNCC	2 cut(s)	46, 1081
BspMI	ACCTGC	1 cut(s)	1309
BspPI	GGATC	3 cut(s)	12, 200, 1479
BsrDI	GCAATG	2 cut(s)	537, 1203
BsrFI	RCCGGY	1 cut(s)	542
BsrI	ACTGG	2 cut(s)	1501, 1676
BssAI	RCCGGY	1 cut(s)	542
BssECI	CCNNGG	5 cut(s)	408, 827, 1072, 1352, 1572
BssNI	GRCGYC	1 cut(s)	66
BssT1I	CCWWGG	4 cut(s)	408, 827, 1072, 1352
Bst2UI	CCWGG	3 cut(s)	10, 124, 899
Bst4CI	ACNGT	8 cut(s)	89, 161, 384, 484, 701, 1257, 1528, 1550
BstACI	GRCGYC	1 cut(s)	66
BstAPI	GCANNNNNTGC	2 cut(s)	404, 539
BstBAI	YACGTR	1 cut(s)	556
BstC8I	GCNNGC	5 cut(s)	344, 535, 544, 618, 629
BstDEI	CTNAG	2 cut(s)	867, 1651
BstDSI	CCRYGG	1 cut(s)	408
BstF5I	GGATG	3 cut(s)	445, 881, 1143
BstFNI	CGCG	1 cut(s)	627
BstHHI	GCGC	1 cut(s)	627
BstMAI	GTCTC	6 cut(s)	229, 249, 684, 723, 1060, 1146
BstMCI	CGRYCG	1 cut(s)	354
BstMWI	GCNNNNNNNGC	6 cut(s)	404, 539, 543, 590, 622, 1178
BstNI	CCWGG	3 cut(s)	10, 124, 899
BstNSI	RCATGY	4 cut(s)	346, 464, 620, 1672
BstSCI	CCNGG	3 cut(s)	8, 122, 897
BstSFI	CTRYAG	2 cut(s)	1038, 1420
BstUI	CGCG	1 cut(s)	627
BstV1I	GCAGC	4 cut(s)	517, 568, 1021, 1193
BstV2I	GAAGAC	2 cut(s)	1343, 1364
BstX2I	RGATCY	3 cut(s)	17, 772, 1471
BstYI	RGATCY	3 cut(s)	17, 772, 1471
Bsu15I	ATCGAT	1 cut(s)	204
BsuI	GTATCC	1 cut(s)	44
BsuRI	GGCC	2 cut(s)	546, 1614
BsuTUI	ATCGAT	1 cut(s)	204
BtgI	CCRYGG	1 cut(s)	408
BtgZI	GCGATG	2 cut(s)	85, 483
BtrI	CACGTC	1 cut(s)	676
BtsCI	GGATG	3 cut(s)	445, 881, 1143
BtsI	GCAGTG	2 cut(s)	324, 576
BtsIMutI	CAGTG	7 cut(s)	157, 324, 576, 823, 1253, 1524, 1555
BveI	ACCTGC	1 cut(s)	1309
Cac8I	GCNNGC	5 cut(s)	344, 535, 544, 618, 629
CciI	TCATGA	1 cut(s)	1459
CfoI	GCGC	1 cut(s)	627
Cfr10I	RCCGGY	1 cut(s)	542
Cfr13I	GGNCC	1 cut(s)	1639
ClaI	ATCGAT	1 cut(s)	204
CseI	GACGC	3 cut(s)	55, 536, 1040
Csp6I	GTAC	5 cut(s)	485, 991, 1435, 1666, 1684
CspCI	CAANNNNNGTGG	2 cut(s)	319, 354
CviAII	CATG	8 cut(s)	184, 343, 409, 461, 617, 982, 1460, 1669
CviQI	GTAC	5 cut(s)	485, 991, 1435, 1666, 1684
DdeI	CTNAG	2 cut(s)	867, 1651
DraI	TTTAAA	2 cut(s)	604, 1026
DraIII	CACNNNGTG	1 cut(s)	1052
DriI	GACNNNNNGTC	1 cut(s)	159
Eam1105I	GACNNNNNGTC	1 cut(s)	159
Eco130I	CCWWGG	4 cut(s)	408, 827, 1072, 1352
Eco32I	GATATC	1 cut(s)	707
Eco47I	GGWCC	1 cut(s)	1639
Eco88I	CYCGRG	1 cut(s)	55
EcoRI	GAATTC	2 cut(s)	133, 1500
EcoRII	CCWGG	3 cut(s)	8, 122, 897
EcoRV	GATATC	1 cut(s)	707
EcoT14I	CCWWGG	4 cut(s)	408, 827, 1072, 1352
ErhI	CCWWGG	4 cut(s)	408, 827, 1072, 1352
Esp3I	CGTCTC	1 cut(s)	1146
FaeI	CATG	8 cut(s)	187, 346, 412, 464, 620, 985, 1463, 1672
FaqI	GGGAC	3 cut(s)	974, 1144, 1495
FatI	CATG	8 cut(s)	183, 342, 408, 460, 616, 981, 1459, 1668
FauI	CCCGC	1 cut(s)	655
FauNDI	CATATG	1 cut(s)	965
FbaI	TGATCA	2 cut(s)	799, 970
Fnu4HI	GCNGC	6 cut(s)	6, 531, 582, 585, 1035, 1182
FokI	GGATG	3 cut(s)	432, 868, 1130
Fsp4HI	GCNGC	6 cut(s)	6, 531, 582, 585, 1035, 1182
FspBI	CTAG	6 cut(s)	336, 450, 957, 1010, 1073, 1278
GlaI	GCGC	1 cut(s)	626
GluI	GCNGC	6 cut(s)	6, 531, 582, 585, 1035, 1182
HaeIII	GGCC	2 cut(s)	546, 1614
HapII	CCGG	2 cut(s)	48, 543
HgaI	GACGC	3 cut(s)	55, 536, 1040
HhaI	GCGC	1 cut(s)	627
Hin1I	GRCGYC	1 cut(s)	66
Hin1II	CATG	8 cut(s)	187, 346, 412, 464, 620, 985, 1463, 1672
Hin6I	GCGC	1 cut(s)	625
HinP1I	GCGC	1 cut(s)	625
HincII	GTYRAC	2 cut(s)	1203, 1443
HindII	GTYRAC	2 cut(s)	1203, 1443
HpaI	GTTAAC	1 cut(s)	1203
HpaII	CCGG	2 cut(s)	48, 543
HphI	GGTGA	1 cut(s)	490
Hpy166II	GTNNAC	6 cut(s)	147, 1203, 1443, 1494, 1639, 1684
Hpy188I	TCNGA	5 cut(s)	32, 132, 294, 975, 1060
Hpy188III	TCNNGA	8 cut(s)	70, 209, 274, 793, 1103, 1112, 1460, 1660
Hpy8I	GTNNAC	6 cut(s)	147, 1203, 1443, 1494, 1639, 1684
HpyAV	CCTTC	1 cut(s)	106
HpyCH4III	ACNGT	8 cut(s)	89, 161, 384, 484, 701, 1257, 1528, 1550
HpyCH4IV	ACGT	2 cut(s)	555, 675
HpyF10VI	GCNNNNNNNGC	6 cut(s)	404, 539, 543, 590, 622, 1178
HpyF3I	CTNAG	2 cut(s)	867, 1651
HpySE526I	ACGT	2 cut(s)	555, 675
Hsp92I	GRCGYC	1 cut(s)	66
Hsp92II	CATG	8 cut(s)	187, 346, 412, 464, 620, 985, 1463, 1672
HspAI	GCGC	1 cut(s)	625
KroI	GCCGGC	1 cut(s)	542
KroNI	GCCGGC	1 cut(s)	544
Ksp22I	TGATCA	2 cut(s)	799, 970
KspAI	GTTAAC	1 cut(s)	1203
LmnI	GCTCC	1 cut(s)	1074
Lsp1109I	GCAGC	4 cut(s)	517, 568, 1021, 1193
LweI	GCATC	4 cut(s)	313, 460, 462, 1152
MaeI	CTAG	6 cut(s)	336, 450, 957, 1010, 1073, 1278
MaeII	ACGT	2 cut(s)	555, 675
MaeIII	GTNAC	5 cut(s)	83, 322, 1270, 1564, 1597
MboII	GAAGA	6 cut(s)	646, 1114, 1169, 1172, 1348, 1369
MflI	RGATCY	3 cut(s)	17, 772, 1471
MluCI	AATT	9 cut(s)	33, 133, 278, 361, 399, 421, 1163, 1387, 1500
MlyI	GAGTC	7 cut(s)	148, 566, 868, 1126, 1273, 1354, 1438
MroNI	GCCGGC	1 cut(s)	542
MseI	TTAA	7 cut(s)	242, 360, 438, 603, 1025, 1202, 1593
MslI	CAYNNNNRTG	3 cut(s)	461, 741, 999
MspI	CCGG	2 cut(s)	48, 543
MspR9I	CCNGG	3 cut(s)	10, 124, 899
MvaI	CCWGG	3 cut(s)	10, 124, 899
MvnI	CGCG	1 cut(s)	627
MwoI	GCNNNNNNNGC	6 cut(s)	404, 539, 543, 590, 622, 1178
NaeI	GCCGGC	1 cut(s)	544
NcoI	CCATGG	1 cut(s)	408
NdeI	CATATG	1 cut(s)	965
NgoMIV	GCCGGC	1 cut(s)	542
NlaIII	CATG	8 cut(s)	187, 346, 412, 464, 620, 985, 1463, 1672
NlaIV	GGNNCC	2 cut(s)	46, 1081
NmeAIII	GCCGAG	1 cut(s)	1597
NmuCI	GTSAC	1 cut(s)	322
NspI	RCATGY	4 cut(s)	346, 464, 620, 1672
OliI	CACNNNNGTG	3 cut(s)	461, 741, 999
PaeI	GCATGC	2 cut(s)	346, 620
PaeR7I	CTCGAG	1 cut(s)	55
PagI	TCATGA	1 cut(s)	1459
PdiI	GCCGGC	1 cut(s)	544
PfeI	GAWTC	5 cut(s)	127, 917, 1090, 1115, 1554
PflFI	GACNNNGTC	1 cut(s)	877
PkrI	GCNGC	6 cut(s)	7, 532, 583, 586, 1036, 1183
Ple19I	CGATCG	1 cut(s)	354
PleI	GAGTC	7 cut(s)	148, 566, 868, 1126, 1272, 1354, 1438
PpsI	GAGTC	7 cut(s)	148, 566, 868, 1126, 1272, 1354, 1438
Ppu21I	YACGTR	1 cut(s)	556
Psp6I	CCWGG	3 cut(s)	8, 122, 897
PspGI	CCWGG	3 cut(s)	8, 122, 897
PspN4I	GGNNCC	2 cut(s)	46, 1081
PspPI	GGNCC	1 cut(s)	1639
PspXI	VCTCGAGB	1 cut(s)	55
PsuI	RGATCY	3 cut(s)	17, 772, 1471
PsyI	GACNNNGTC	1 cut(s)	877
PvuI	CGATCG	1 cut(s)	354
RsaI	GTAC	5 cut(s)	486, 992, 1436, 1667, 1685
RsaNI	GTAC	5 cut(s)	485, 991, 1435, 1666, 1684
RseI	CAYNNNNRTG	3 cut(s)	461, 741, 999
SaqAI	TTAA	7 cut(s)	242, 360, 438, 603, 1025, 1202, 1593
SatI	GCNGC	6 cut(s)	6, 531, 582, 585, 1035, 1182
Sau96I	GGNCC	1 cut(s)	1639
SchI	GAGTC	7 cut(s)	148, 566, 868, 1126, 1273, 1354, 1438
ScrFI	CCNGG	3 cut(s)	10, 124, 899
SfaNI	GCATC	4 cut(s)	313, 460, 462, 1152
SfcI	CTRYAG	2 cut(s)	1038, 1420
Sfr274I	CTCGAG	1 cut(s)	55
SinI	GGWCC	1 cut(s)	1639
SlaI	CTCGAG	1 cut(s)	55
SmiMI	CAYNNNNRTG	3 cut(s)	461, 741, 999
SmlI	CTYRAG	2 cut(s)	55, 1134
SmoI	CTYRAG	2 cut(s)	55, 1134
SpeI	ACTAGT	1 cut(s)	335
SphI	GCATGC	2 cut(s)	346, 620
Sse9I	AATT	9 cut(s)	33, 133, 278, 361, 399, 421, 1163, 1387, 1500
SsiI	CCGC	3 cut(s)	585, 662, 1341
SspMI	CTAG	6 cut(s)	336, 450, 957, 1010, 1073, 1278
StyD4I	CCNGG	3 cut(s)	8, 122, 897
StyI	CCWWGG	4 cut(s)	408, 827, 1072, 1352
TaaI	ACNGT	8 cut(s)	89, 161, 384, 484, 701, 1257, 1528, 1550
TaiI	ACGT	2 cut(s)	558, 678
TaqI	TCGA	9 cut(s)	56, 204, 393, 927, 942, 1125, 1291, 1488, 1632
TaqII	GACCGA	1 cut(s)	1637
TasI	AATT	9 cut(s)	33, 133, 278, 361, 399, 421, 1163, 1387, 1500
TatI	WGTACW	2 cut(s)	1665, 1683
TauI	GCSGC	1 cut(s)	587
TfiI	GAWTC	5 cut(s)	127, 917, 1090, 1115, 1554
Tru1I	TTAA	7 cut(s)	242, 360, 438, 603, 1025, 1202, 1593
Tru9I	TTAA	7 cut(s)	242, 360, 438, 603, 1025, 1202, 1593
TscAI	CASTG	7 cut(s)	164, 331, 583, 823, 1260, 1531, 1555
TseFI	GTSAC	1 cut(s)	322
TseI	GCWGC	5 cut(s)	5, 530, 581, 1034, 1181
Tsp45I	GTSAC	1 cut(s)	322
TspDTI	ATGAA	1 cut(s)	899
TspRI	CASTG	7 cut(s)	164, 331, 583, 823, 1260, 1531, 1555
Tth111I	GACNNNGTC	1 cut(s)	877
VpaK11BI	GGWCC	1 cut(s)	1639
XapI	RAATTY	3 cut(s)	133, 278, 1500
XceI	RCATGY	4 cut(s)	346, 464, 620, 1672
XhoI	CTCGAG	1 cut(s)	55
XmaJI	CCTAGG	1 cut(s)	1072
XspI	CTAG	6 cut(s)	336, 450, 957, 1010, 1073, 1278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.