Prupe.2G233000_v2.0.a1

SLT1 protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25630670 .. 25633604
2935 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G233000.1

Sequence Viewer

Length: 1509 bp
ATGGGGGAAGCTCTTCTCACTACCTTGTCCATAGAGAATTCTCATTTGTCTACATTATTGTCTATGGATTCGAGTTCTTTGTCGCATGATGAATTGGAAAGAGAGATGAATCGAACATTCATACTTTCTCGTCCTCCTGATATCAATCTCCCGCTACTTTCTGAGCCCAGCCCACCTCCTCAAACCTGGAATGATTCATGTGACATCTTGGATGTAGGCCTTGGGTCTCAAGTTTATGAGGCTGAGGCAACAATCAGTCTCCCCAAAGTTGTAAGGAAATGCAACAAGAGACTTGATAGCGTTTGGGGTGCGTGGTTTTTCTTCAGCTTCTATTTCAAGCCTGTGTTGAATGAGAAGTCCAAGTGTAAGGTCATTCGGGACAGTAATGGGGTGTCTGGGTATGACAAAACAGACTTGCAGTTAGATGCTTTCTTGGTTCAGCATGATATGGAGAACATGTATATGTGGGTTTTCAAGGATAGACCTGAAAATGCATTGGGTAAGATGCAGCTGAGGAGCTACATGAATGGGCATTCTCGCCAAGGAGAACGTCCATTCCCATTTAGTGTCGACAGGGGTTTTGTTCGGTCTCATCGGATGCAGAGGAAGCACTATAGGGGTCTTTCTAATCCGCAGTGTGTTCATGGGATTGAAGTTGTTCGATCACCCAACCTCATGTGTCTTGATGATGAAGAGAGGAAGAGGTGGACAGAGCTTACAGGCCGAGATATAAATTTCTCAATCCCTCTTGAAGCAAGTGACTTTGGTACTTGGAGGAACCTACAAAATACAGAATTCGAGCTTGAACGGCCAGTCCCTCCATCAAAGAACAATATAAATTCTCACCCAAGAAAATTACTTGATGGTACTGGTTTAAATTTGTCAACTCAGCCATCAGAGCATGTGAACAATGAGGGGATGGACCTATCCCCGGTCTGCAACAAGCGAAAGAAGGACCTTTTCCCCCATGGGAGTGACAGTGATTGTTGTTTACCTAATAACCCTCATTTTGACAGAGTTTTGGATGGCAAAGTCTACCCAGTTGAGTCACCTTGGTTTAATGAGTTTAGTGGGGTAATGAAGAATGCATCGGGGCCTGTTACAGCTGCGAAAACAATATATGAGGATGATGAAGGGTTTTTGATCATTGTCAGCTTGCCTTTTGTAGATCTTCAAAGGGTAAAAGTTACTTGGAAGAATACTCCGTCACATGGGATTGTAAAGATATCTTGTGTGAGTACAGCTTGTATTCCATTCATTAAGAGACGTGATAGAACATTTAAGCTAACAGATCCAACACCGGAGCACTGCCCTCCTGGGGAATTTGTGAGGGAAATTGCGCTCCCTACCCGCATTCCAGAAGATGCAAAACTGGAAGCATACTGCGACGAGACTGGAACAATGCTCGAGATTATGGTACCAAAACGTCGAGTGGGACCAGAAGAACATGAGGTCCGTGTGTGTCTTCGTCCCTCTCCCTGGAATGAAAGAGAGCATCTGTTGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

503

Amino Acids

57.4

Weight (kDa)

6.05

Isoelectric Point (pI)

51.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1417
AccB1I GGYRCC 1 cut(s) 1417
AccI GTMKAC 3 cut(s) 50, 570, 1035
AciI CCGC 3 cut(s) 152, 632, 1351
AclWI GGATC 1 cut(s) 1286
AcoI YGGCCR 1 cut(s) 809
AcsI RAATTY 6 cut(s) 37, 733, 794, 838, 877, 1322
AcuI CTGAAG 1 cut(s) 307
AfaI GTAC 4 cut(s) 769, 868, 1240, 1419
AfiI CCNNNNNNNGG 4 cut(s) 931, 1211, 1318, 1479
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 7 cut(s) 337, 349, 475, 653, 752, 806, 1175
AjiI CACGTC 1 cut(s) 1268
AjnI CCWGG 3 cut(s) 185, 1315, 1478
AloI GAACNNNNNNTCC 6 cut(s) 540, 572, 798, 830, 1437, 1469
Alw21I GWGCWC 1 cut(s) 1308
Alw26I GTCTC 6 cut(s) 231, 263, 283, 594, 1258, 1385
AlwI GGATC 1 cut(s) 1286
Ama87I CYCGRG 1 cut(s) 1406
AoxI GGCC 4 cut(s) 217, 721, 809, 1094
ApeKI GCWGC 2 cut(s) 508, 1106
ApoI RAATTY 6 cut(s) 37, 733, 794, 838, 877, 1322
ArsI GACNNNNNNTTYG 2 cut(s) 563, 595
Asp700I GAANNNNTTC 2 cut(s) 12, 657
Asp718I GGTACC 1 cut(s) 1417
AspLEI GCGC 1 cut(s) 1342
AspS9I GGNCC 5 cut(s) 922, 955, 1094, 1436, 1453
AsuC2I CCSGG 1 cut(s) 932
AsuHPI GGTGA 3 cut(s) 657, 836, 1041
AvaI CYCGRG 1 cut(s) 1406
AvaII GGWCC 4 cut(s) 922, 955, 1436, 1453
BanI GGYRCC 1 cut(s) 1417
BanII GRGCYC 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 1457
Bbv12I GWGCWC 1 cut(s) 1308
BbvCI CCTCAGC 2 cut(s) 243, 512
BbvI GCAGC 2 cut(s) 520, 1093
BccI CCATC 5 cut(s) 829, 857, 901, 913, 1019
BceAI ACGGC 1 cut(s) 824
BciT130I CCWGG 3 cut(s) 187, 1317, 1480
BclI TGATCA 1 cut(s) 1143
BcnI CCSGG 1 cut(s) 932
BcoDI GTCTC 6 cut(s) 231, 263, 283, 594, 1258, 1385
BfmI CTRYAG 1 cut(s) 613
BglII AGATCT 1 cut(s) 1168
BisI GCNGC 2 cut(s) 509, 1107
BlsI GCNGC 2 cut(s) 510, 1108
Bme1390I CCNGG 4 cut(s) 187, 932, 1317, 1480
Bme18I GGWCC 4 cut(s) 922, 955, 1436, 1453
BmeT110I CYCGRG 1 cut(s) 1406
BmgBI CACGTC 1 cut(s) 1268
BmgT120I GGNCC 5 cut(s) 922, 955, 1094, 1436, 1453
BmiI GGNNCC 4 cut(s) 779, 1095, 1419, 1437
BmrFI CCNGG 4 cut(s) 187, 932, 1317, 1480
BmrI ACTGGG 1 cut(s) 1034
BmsI GCATC 6 cut(s) 415, 495, 588, 1097, 1354, 1504
BmuI ACTGGG 1 cut(s) 1034
BpiI GAAGAC 1 cut(s) 1457
Bpu10I CCTNAGC 2 cut(s) 243, 512
BpuEI CTTGAG 1 cut(s) 213
BpuMI CCSGG 1 cut(s) 932
BsaBI GATNNNNATC 1 cut(s) 144
BsaI GGTCTC 2 cut(s) 231, 594
BsaJI CCNNGG 7 cut(s) 220, 541, 930, 967, 1052, 1316, 1478
BsaWI WCCGGW 1 cut(s) 1300
BsaXI ACNNNNNCTCC 4 cut(s) 443, 473, 964, 994
Bsc4I CCNNNNNNNGG 4 cut(s) 931, 1211, 1318, 1479
Bse1I ACTGG 5 cut(s) 812, 874, 1040, 1377, 1399
Bse8I GATNNNNATC 1 cut(s) 144
BseBI CCWGG 3 cut(s) 187, 1317, 1480
BseDI CCNNGG 7 cut(s) 220, 541, 930, 967, 1052, 1316, 1478
BseGI GGATG 5 cut(s) 217, 603, 924, 1030, 1132
BseJI GATNNNNATC 1 cut(s) 144
BseLI CCNNNNNNNGG 4 cut(s) 931, 1211, 1318, 1479
BseMII CTCAG 4 cut(s) 153, 234, 503, 902
BseNI ACTGG 5 cut(s) 812, 874, 1040, 1377, 1399
BseRI GAGGAG 2 cut(s) 168, 529
BseXI GCAGC 2 cut(s) 520, 1093
BseYI CCCAGC 1 cut(s) 167
BshFI GGCC 4 cut(s) 219, 723, 811, 1096
BshNI GGYRCC 1 cut(s) 1417
BsiHKAI GWGCWC 1 cut(s) 1308
BsiHKCI CYCGRG 1 cut(s) 1406
BsiSI CCGG 2 cut(s) 932, 1301
BslFI GGGAC 4 cut(s) 392, 800, 1449, 1455
BslI CCNNNNNNNGG 4 cut(s) 931, 1211, 1318, 1479
BsmAI GTCTC 6 cut(s) 231, 263, 283, 594, 1258, 1385
BsmBI CGTCTC 1 cut(s) 1258
BsmFI GGGAC 4 cut(s) 392, 800, 1449, 1455
BsmI GAATGC 3 cut(s) 532, 1090, 1353
BsnI GGCC 4 cut(s) 219, 723, 811, 1096
Bso31I GGTCTC 2 cut(s) 231, 594
BsoBI CYCGRG 1 cut(s) 1406
Bsp1286I GDGCHC 2 cut(s) 168, 1308
Bsp143I GATC 4 cut(s) 662, 1143, 1168, 1291
Bsp19I CCATGG 1 cut(s) 967
BspACI CCGC 3 cut(s) 152, 632, 1351
BspANI GGCC 4 cut(s) 219, 723, 811, 1096
BspCNI CTCAG 4 cut(s) 154, 235, 504, 901
BspLI GGNNCC 4 cut(s) 779, 1095, 1419, 1437
BspPI GGATC 1 cut(s) 1286
BspQI GCTCTTC 1 cut(s) 18
BspT107I GGYRCC 1 cut(s) 1417
BspTNI GGTCTC 2 cut(s) 231, 594
BsrI ACTGG 5 cut(s) 812, 874, 1040, 1377, 1399
BssECI CCNNGG 7 cut(s) 220, 541, 930, 967, 1052, 1316, 1478
BssMI GATC 4 cut(s) 662, 1143, 1168, 1291
BssT1I CCWWGG 4 cut(s) 220, 541, 967, 1052
Bst2UI CCWGG 3 cut(s) 187, 1317, 1480
Bst4CI ACNGT 2 cut(s) 383, 980
Bst6I CTCTTC 3 cut(s) 18, 687, 695
BstC8I GCNNGC 1 cut(s) 1157
BstDEI CTNAG 4 cut(s) 162, 243, 512, 888
BstDSI CCRYGG 1 cut(s) 967
BstF5I GGATG 5 cut(s) 217, 603, 924, 1030, 1132
BstHHI GCGC 1 cut(s) 1342
BstKTI GATC 4 cut(s) 665, 1146, 1171, 1294
BstMAI GTCTC 6 cut(s) 231, 263, 283, 594, 1258, 1385
BstMBI GATC 4 cut(s) 662, 1143, 1168, 1291
BstMWI GCNNNNNNNGC 3 cut(s) 607, 808, 898
BstNI CCWGG 3 cut(s) 187, 1317, 1480
BstNSI RCATGY 2 cut(s) 460, 905
BstSCI CCNGG 4 cut(s) 185, 930, 1315, 1478
BstSFI CTRYAG 1 cut(s) 613
BstV1I GCAGC 2 cut(s) 520, 1093
BstV2I GAAGAC 1 cut(s) 1457
BstX2I RGATCY 2 cut(s) 1168, 1291
BstYI RGATCY 2 cut(s) 1168, 1291
BsuRI GGCC 4 cut(s) 219, 723, 811, 1096
BtgI CCRYGG 1 cut(s) 967
BtrI CACGTC 1 cut(s) 1268
BtsCI GGATG 5 cut(s) 217, 603, 924, 1030, 1132
BtsI GCAGTG 2 cut(s) 641, 1306
BtsIMutI CAGTG 3 cut(s) 641, 985, 1306
Cac8I GCNNGC 1 cut(s) 1157
CfoI GCGC 1 cut(s) 1342
Cfr13I GGNCC 5 cut(s) 922, 955, 1094, 1436, 1453
Csp6I GTAC 4 cut(s) 768, 867, 1239, 1418
CviQI GTAC 4 cut(s) 768, 867, 1239, 1418
DdeI CTNAG 4 cut(s) 162, 243, 512, 888
DpnI GATC 4 cut(s) 664, 1145, 1170, 1293
DpnII GATC 4 cut(s) 662, 1143, 1168, 1291
DraI TTTAAA 1 cut(s) 876
EaeI YGGCCR 1 cut(s) 809
Eam1104I CTCTTC 3 cut(s) 18, 687, 695
EarI CTCTTC 3 cut(s) 18, 687, 695
Eco130I CCWWGG 4 cut(s) 220, 541, 967, 1052
Eco147I AGGCCT 1 cut(s) 219
Eco24I GRGCYC 1 cut(s) 168
Eco31I GGTCTC 2 cut(s) 231, 594
Eco32I GATATC 2 cut(s) 142, 1227
Eco47I GGWCC 4 cut(s) 922, 955, 1436, 1453
Eco57I CTGAAG 1 cut(s) 307
Eco88I CYCGRG 1 cut(s) 1406
EcoO109I RGGNCCY 2 cut(s) 955, 1094
EcoRI GAATTC 2 cut(s) 37, 794
EcoRII CCWGG 3 cut(s) 185, 1315, 1478
EcoRV GATATC 2 cut(s) 142, 1227
EcoT14I CCWWGG 4 cut(s) 220, 541, 967, 1052
EcoT22I ATGCAT 2 cut(s) 496, 1090
EcoT38I GRGCYC 1 cut(s) 168
ErhI CCWWGG 4 cut(s) 220, 541, 967, 1052
Esp3I CGTCTC 1 cut(s) 1258
FaqI GGGAC 4 cut(s) 392, 800, 1449, 1455
FauI CCCGC 2 cut(s) 159, 1358
FbaI TGATCA 1 cut(s) 1143
FblI GTMKAC 3 cut(s) 50, 570, 1035
Fnu4HI GCNGC 2 cut(s) 509, 1107
FokI GGATG 5 cut(s) 224, 610, 931, 1037, 1139
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 2 cut(s) 509, 1107
GlaI GCGC 1 cut(s) 1341
GluI GCNGC 2 cut(s) 509, 1107
GsaI CCCAGC 1 cut(s) 171
HaeIII GGCC 4 cut(s) 219, 723, 811, 1096
HapII CCGG 2 cut(s) 932, 1301
HhaI GCGC 1 cut(s) 1342
Hin6I GCGC 1 cut(s) 1340
HinP1I GCGC 1 cut(s) 1340
HincII GTYRAC 3 cut(s) 571, 885, 1503
HindII GTYRAC 3 cut(s) 571, 885, 1503
HinfI GANTC 4 cut(s) 68, 109, 194, 1046
HpaII CCGG 2 cut(s) 932, 1301
HphI GGTGA 3 cut(s) 657, 836, 1041
Hpy166II GTNNAC 8 cut(s) 51, 571, 708, 885, 907, 992, 1036, 1503
Hpy188I TCNGA 3 cut(s) 163, 597, 898
Hpy188III TCNNGA 6 cut(s) 137, 377, 683, 749, 1358, 1408
Hpy8I GTNNAC 8 cut(s) 51, 571, 708, 885, 907, 992, 1036, 1503
Hpy99I CGWCG 2 cut(s) 1391, 1431
HpyAV CCTTC 2 cut(s) 946, 1127
HpyCH4III ACNGT 2 cut(s) 383, 980
HpyCH4IV ACGT 3 cut(s) 550, 1267, 1426
HpyCH4V TGCA 8 cut(s) 282, 418, 494, 508, 601, 939, 1088, 1367
HpyF10VI GCNNNNNNNGC 3 cut(s) 607, 808, 898
HpyF3I CTNAG 4 cut(s) 162, 243, 512, 888
HpySE526I ACGT 3 cut(s) 550, 1267, 1426
HspAI GCGC 1 cut(s) 1340
KpnI GGTACC 1 cut(s) 1421
Ksp22I TGATCA 1 cut(s) 1143
Kzo9I GATC 4 cut(s) 662, 1143, 1168, 1291
LguI GCTCTTC 1 cut(s) 18
LmnI GCTCC 3 cut(s) 516, 1303, 1347
Lsp1109I GCAGC 2 cut(s) 520, 1093
LweI GCATC 6 cut(s) 415, 495, 588, 1097, 1354, 1504
MaeII ACGT 3 cut(s) 550, 1267, 1426
MaeIII GTNAC 7 cut(s) 200, 758, 974, 1047, 1099, 1186, 1206
MalI GATC 4 cut(s) 664, 1145, 1170, 1293
MboI GATC 4 cut(s) 662, 1143, 1168, 1291
MflI RGATCY 2 cut(s) 1168, 1291
MhlI GDGCHC 2 cut(s) 168, 1308
MluCI AATT 9 cut(s) 37, 92, 733, 794, 838, 854, 877, 1322, 1335
MlyI GAGTC 1 cut(s) 1055
MmeI TCCRAC 1 cut(s) 1319
Mph1103I ATGCAT 2 cut(s) 496, 1090
MroXI GAANNNNTTC 2 cut(s) 12, 657
MseI TTAA 4 cut(s) 875, 1059, 1260, 1281
MslI CAYNNNNRTG 2 cut(s) 461, 972
MspA1I CMGCKG 2 cut(s) 511, 1106
MspI CCGG 2 cut(s) 932, 1301
MspR9I CCNGG 4 cut(s) 187, 932, 1317, 1480
Mva1269I GAATGC 3 cut(s) 532, 1090, 1353
MvaI CCWGG 3 cut(s) 187, 1317, 1480
MwoI GCNNNNNNNGC 3 cut(s) 607, 808, 898
NciI CCSGG 1 cut(s) 932
NcoI CCATGG 1 cut(s) 967
NdeII GATC 4 cut(s) 662, 1143, 1168, 1291
NlaIV GGNNCC 4 cut(s) 779, 1095, 1419, 1437
NmeAIII GCCGAG 1 cut(s) 749
NmuCI GTSAC 5 cut(s) 200, 758, 974, 1047, 1206
NsiI ATGCAT 2 cut(s) 496, 1090
NspI RCATGY 2 cut(s) 460, 905
PaeR7I CTCGAG 1 cut(s) 1406
PceI AGGCCT 1 cut(s) 219
PciI ACATGT 1 cut(s) 456
PciSI GCTCTTC 1 cut(s) 18
PctI GAATGC 3 cut(s) 532, 1090, 1353
PdmI GAANNNNTTC 2 cut(s) 12, 657
PfeI GAWTC 3 cut(s) 68, 109, 194
PkrI GCNGC 2 cut(s) 510, 1108
PleI GAGTC 1 cut(s) 1054
PpsI GAGTC 1 cut(s) 1054
PpuMI RGGWCCY 1 cut(s) 955
PscI ACATGT 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 955
Psp6I CCWGG 3 cut(s) 185, 1315, 1478
PspFI CCCAGC 1 cut(s) 167
PspGI CCWGG 3 cut(s) 185, 1315, 1478
PspN4I GGNNCC 4 cut(s) 779, 1095, 1419, 1437
PspPI GGNCC 5 cut(s) 922, 955, 1094, 1436, 1453
PspPPI RGGWCCY 1 cut(s) 955
PsuI RGATCY 2 cut(s) 1168, 1291
PvuII CAGCTG 2 cut(s) 511, 1106
RsaI GTAC 4 cut(s) 769, 868, 1240, 1419
RsaNI GTAC 4 cut(s) 768, 867, 1239, 1418
RseI CAYNNNNRTG 2 cut(s) 461, 972
SalI GTCGAC 1 cut(s) 569
SapI GCTCTTC 1 cut(s) 18
SaqAI TTAA 4 cut(s) 875, 1059, 1260, 1281
SatI GCNGC 2 cut(s) 509, 1107
Sau3AI GATC 4 cut(s) 662, 1143, 1168, 1291
Sau96I GGNCC 5 cut(s) 922, 955, 1094, 1436, 1453
SchI GAGTC 1 cut(s) 1055
ScrFI CCNGG 4 cut(s) 187, 932, 1317, 1480
SduI GDGCHC 2 cut(s) 168, 1308
SfaNI GCATC 6 cut(s) 415, 495, 588, 1097, 1354, 1504
SfcI CTRYAG 1 cut(s) 613
Sfr274I CTCGAG 1 cut(s) 1406
SinI GGWCC 4 cut(s) 922, 955, 1436, 1453
SlaI CTCGAG 1 cut(s) 1406
SmiMI CAYNNNNRTG 2 cut(s) 461, 972
SmlI CTYRAG 2 cut(s) 228, 1406
SmoI CTYRAG 2 cut(s) 228, 1406
Sse9I AATT 9 cut(s) 37, 92, 733, 794, 838, 854, 877, 1322, 1335
SseBI AGGCCT 1 cut(s) 219
SsiI CCGC 3 cut(s) 152, 632, 1351
StuI AGGCCT 1 cut(s) 219
StyD4I CCNGG 4 cut(s) 185, 930, 1315, 1478
StyI CCWWGG 4 cut(s) 220, 541, 967, 1052
TaaI ACNGT 2 cut(s) 383, 980
TaiI ACGT 3 cut(s) 553, 1270, 1429
TaqI TCGA 7 cut(s) 71, 112, 570, 661, 798, 1407, 1429
TaqII GACCGA 1 cut(s) 576
TasI AATT 9 cut(s) 37, 92, 733, 794, 838, 854, 877, 1322, 1335
TatI WGTACW 1 cut(s) 1238
TfiI GAWTC 3 cut(s) 68, 109, 194
Tru1I TTAA 4 cut(s) 875, 1059, 1260, 1281
Tru9I TTAA 4 cut(s) 875, 1059, 1260, 1281
TscAI CASTG 3 cut(s) 641, 985, 1313
TseFI GTSAC 5 cut(s) 200, 758, 974, 1047, 1206
TseI GCWGC 2 cut(s) 508, 1106
Tsp45I GTSAC 5 cut(s) 200, 758, 974, 1047, 1206
TspGWI ACGGA 2 cut(s) 1194, 1445
TspRI CASTG 3 cut(s) 641, 985, 1313
VpaK11BI GGWCC 4 cut(s) 922, 955, 1436, 1453
XapI RAATTY 6 cut(s) 37, 733, 794, 838, 877, 1322
XceI RCATGY 2 cut(s) 460, 905
XhoI CTCGAG 1 cut(s) 1406
XmiI GTMKAC 3 cut(s) 50, 570, 1035
XmnI GAANNNNTTC 2 cut(s) 12, 657
Zsp2I ATGCAT 2 cut(s) 496, 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.