Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009227

Physical Location & Seq

Genomic Coordinates Reverse (-)

25806623 .. 25812262

Gene Structure 5640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G236800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3411 bp

ATGTTCCCTCAATTCGGCGCAACAGCAGATACTCTAAGCAAGGCGTCGACAATGGTGTTCCGGATCGGTACGGACGCCCACCTCTACGACGATCCCGATGATGTCAGCATCGCTCCTCTTCTTGACAGCAAGTTCGACTCTGAAAAATGCGAAGCTCTCAAGCGCCTGCTCGCTCTCATCGCCCAGGGCTTCGAAGTCTCCAATTTCTTCCCTCAGGTTGTTAAGAACGTAGCATCGCAGTCATTGGAAGTGAAAAAGCTGGTTTACTTATACCTGCTGCATTATGCTCAAAAGCGTCCGAATGAAGCATTGCTATCGATTAATTACTTCCAGAAGGATTTGGGGGATCCAAATCCGTTAGTGAGGGCATGGGCCCTGAGAACCATGGCGGGGATCCGTCTACATGTTATTGCACCGTTAGTTCTTGTTGCCGCTGGAAAATGTGCTAGAGATCCCTCTGTGTATGTTAGAAAATGCGCGGCCAATGCTCTTCCTAAGCTGCACGATTTGCGCCTTGACGAAAATACCGCGGGGATTGAAGAGATTATCGGAATATTGTTGAATGACCACTCCCCTTGTGTCGTTGGTGCTGCTGCCGCTGCTTTCTCTTCCGTTTGTCCGAATAATTTGGCTCTGATTGGAAGAAATTATAAAAGGTTATGCGAGATTCTTCCTGATGTGGAAGAATGGGGTAAAATAATTTTAATCGGGATCCTTTTGCGCTATATAATTGCGAGGCATGGGCTTGTAAAGGAATCCATTATGTTTTCTTTGCACAGTACAGAGAATTCTCAATCTGAAAAGGATTGTTCAGACACCAACTCTGCGTTAGTGGAAGACAACGGTGACATGAGTGGTCGTTATCAGTCTGAATTAGCAAATATTGTATCCCGTTGTTATATTGAAGGACCAGCTGAACATTTATCACGATTAAGTCTCATGAATAAAGATGCATCTGAATGTAATTATGCCAGTTTTACATCTGGAAAGAACAATGATGATGTGAAGATCCTGCTGCAGTGTACATCCCCATTGTTATGGAGTAATAATAGTGCAGTTGTACTAGCAGCTGCTGGTGTACACTGGATTATGGCACCCATAGAGGATTTGAAAAGAATTGTTAAGCCGCTGTTGTTCGTTCTAAGATCATCTAATGCCTCAAAATATGTGGTTTTATGTAACGTTCAAGTGTTTGCAAAAGCAATTCCTTCACTCTTCTCTCTGTACTTTGAAGACTTCTTTATATGCTCTTCAGATTCATATCAAATTAAAGCTTTGAAACTGGATATACTGGCTTACATTGCCACAGATTCATCAATTTCATTTATACTCAAAGAATTTCAGGATTATATTAGAGATCCAGACAGGAGATTTGCTGCTGATACTGTTGCTGGAATTGGCATATGCGCGCAGCGACTTCCAGAAATGGCAAACACATGCTTAGAATTTTTATTGGCTTTGACCAGACAGCAACTTATGACTGGTGAGTTCGGGTCTGTGGATGGTGAAGCAGATATTTTGATTCAAGCAATAATGTCTATTAAATCAATCATTCAGCAAGATCCACCCAGTCATGAAAAGGTTATTATTCAGTTGGTTCGTAGTTTAAATTCAATAAAGGTGCCTGCTGCACGGGCTATAATTGTTTGGATGGTGGGGGAGTATAACTCTTTAGGTGATCTCATCCCAAAGATGTTAGCTACAGTACTCAAGTATCTTGCATGGTGCTTTACTTCAGAAGAGTTGGAAACAAAGCTTCAAATTTGTAATACTACTGTTAAGGTTTTATTGCATGCAAAAGGGAATGATCTGTTGACTATCAAAAAAGTTTTAATCTATGTGCTGGAACTGGCCAAATGCGACTTAAACTATGACATTCGTGATCGAGCTCATTTCTTAAGGAAAATTCTGTCAACTTATTTAGATTCTCGAGGTCTGGAGGAGGAAACCAATTGTCTGGCCCAGCATAAAGATAGTTCATGTGTCCTTGCGGAATACTTATTTGGAGGACAAAAAAAACCAATGCCACATGAGCCCATTGATCACCGGTTTTACCTTCCTGGCTCTTTATCACAGATAGTACTTCATGCTGCTCCAGGGTATGAACCTCTCCCAAAGCCCTGTAGTTTGCGCTGTGATGGCCTCAAAATGAATGAATTTGGAGAGGGAGTCACTAATGGTGATCCATATGTTACAGACAACGAGGACTCAGAGTCTGAATTTTTGGATGAGGAAAACGCTTCTAGTTATAGTTCACAACACTCTGATATGGATTCAAGTGGCAGTGGTGGCAGTGAAGAGGCAGGTTCTGCAAGTGAAGGCGATGAAAATTCTCATCCCTTGATTCAATTTTCAGATGTTGGAAATGCTAATGAAAAGAAAAATATAGCTTCTCAGTCTGCTTCTGATTTTGGGGAATTGTTGTCAAATAGAGCTTTAGAATCATGGTTAGATGAGCAGCCTGGTTTTTCAAGCACAAATACTTCAGAACAAAGTCAAGTCCGTAGATCTTCAGCAAGAATCTCCATTGGTGATATTGGAGGTCAAATTAAACCTAAAAGCTATGCACTCTTGGATCCTGTGAATGGAAACGGCTTAAAGGCTGACTATTCATTTTCATCTGAGATTTCAAGCATCTCTCCTTTGTTTCTATGTATAGAAGTTTCCTTCAAGAACTGTTCAAAGGAAATCGTGTCTGATATAACTTTGGTTGATGAGGAATCCGGCAAAGGCATGGATTCTGTAGACCAAGCTTCGGGTTCACGTGAAAGCTCAACAACACCTGAAAATAATGAGCCAAATCTAGTTTCTGTAGAAGAGATCGCTTCTCTAGAACCTGGTCAGGCAATGACAAGAACCGTCCAGGTTCGCTTCCATCACCACCTTTTGCCTCTAAAACTGACCTTATATTGTAATGGCAAGAGGCATCCTGTTAAGTTGCGGCCCGACATTGGATACTTTGTAAAAGCTCTTCCTATGGATGTTGAAGCCTTCACAAAAAAGGAGTCTCATCTGCGAGGAATGTTTGAATGTGTAAGAAGGTGCACCTTCACTGATCATATCAAGGAGTTGGACAAGGACAAGGGTGACGATTCATTGGTAGAAGACAAATTTCTCGTAATCTGCCGAAATCTTGCATTGAAAATGCTTAGCAGTGCAAATCTTCATCTTGTATCTGTTGATTTGCCAGTCGCAGCGAACCTCGATGATGCAACAGGTTTGTGCTTACGATTCAGCAGCAAGCTTTTGAGCACCTCTGCCCCCTGCTTGATCACCATCACCGTTCAAGGTAGATGTTCTGAACCGTTGGAAATGTCAGTTAAAGTAAACTGCGAAGAAACTGTATTCGGGCTGAATCTGCTGAACAGGATCGTGAATGTATTGGTTGAGCCCTCTCATGCCCATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

AP3B1_C Adaptin_N

Protein Analysis

1137

Amino Acids

125.35

Weight (kDa)

5.29

Isoelectric Point (pI)

42.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55480 AT3G55480
fragaria_vesca	FvH4_7g22680 FvH4_7g22680 FvH4_7g22680 FvH4_7g22680
malus_domestica	MD01G1135400.v1.1 MD07G1200100.v1.1
prunus_persica	Prupe.2G236800_v2.0.a1 Prupe.2G236800_v2.0.a1
pyrus_communis	pycom01g15610 pycom07g18690
rosa_chinensis	RchiOBHm_Chr1g0367761
rosa_laevigata	RLG00000027265
rosa_multiflora	Rmu_ssc0000395.1_g000020
rosa_roxburghii	Rroxscaffold_4G00289240
rosa_rugosa	Rorug01G0336400
rosa_samantha	Rh1AG343600 Rh1BG305500 Rh1CG321100 Rh1DG337700
rosa_wichuraiana	Rw1G030580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	651
Acc36I	ACCTGC	2 cut(s)	282, 2294
AccB1I	GGYRCC	2 cut(s)	1093, 1621
AccI	GTMKAC	3 cut(s)	47, 400, 2745
AccII	CGCG	3 cut(s)	479, 530, 1409
AccIII	TCCGGA	1 cut(s)	60
AciI	CCGC	9 cut(s)	389, 432, 479, 528, 530, 597, 1127, 1991, 2941
AclI	AACGTT	1 cut(s)	1182
AcoI	YGGCCR	2 cut(s)	480, 1851
AcuI	CTGAAG	4 cut(s)	1236, 1719, 2469, 2496
AcvI	CACGTG	1 cut(s)	2765
AcyI	GRCGYC	2 cut(s)	44, 75
AfaI	GTAC	8 cut(s)	70, 781, 1024, 1062, 1080, 1226, 1707, 2082
AfiI	CCNNNNNNNGG	5 cut(s)	14, 390, 2585, 2755, 2951
AflII	CTTAAG	1 cut(s)	1897
AflIII	ACRYGT	1 cut(s)	403
AgeI	ACCGGT	1 cut(s)	2046
AhdI	GACNNNNNGTC	1 cut(s)	2212
AjnI	CCWGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
AjuI	GAANNNNNNNTTGG	4 cut(s)	1986, 2018, 2791, 2823
Alw21I	GWGCWC	3 cut(s)	1891, 3047, 3254
Alw26I	GTCTC	3 cut(s)	202, 941, 3012
Alw44I	GTGCAC	1 cut(s)	3043
AlwNI	CAGNNNCTG	3 cut(s)	1073, 2216, 2309
Ama87I	CYCGRG	1 cut(s)	1929
Aor13HI	TCCGGA	1 cut(s)	60
AoxI	GGCC	6 cut(s)	372, 480, 1851, 1959, 2140, 2942
ApaI	GGGCCC	1 cut(s)	376
ApaLI	GTGCAC	1 cut(s)	3043
ArsI	GACNNNNNNTTYG	6 cut(s)	116, 148, 1355, 1387, 2990, 3022
AseI	ATTAAT	1 cut(s)	321
AsiGI	ACCGGT	1 cut(s)	2046
AspLEI	GCGC	8 cut(s)	20, 165, 479, 513, 723, 1409, 1411, 2133
AspS9I	GGNCC	5 cut(s)	372, 373, 908, 1960, 2943
AsuII	TTCGAA	1 cut(s)	192
AvaI	CYCGRG	1 cut(s)	1929
AvaII	GGWCC	1 cut(s)	908
AxyI	CCTNAGG	1 cut(s)	213
BaeGI	GKGCMC	2 cut(s)	376, 3047
BaeI	ACNNNNGTAYC	2 cut(s)	1697, 1730
BalI	TGGCCA	1 cut(s)	1853
BamHI	GGATCC	4 cut(s)	346, 393, 711, 2575
BanI	GGYRCC	2 cut(s)	1093, 1621
BanII	GRGCYC	4 cut(s)	376, 1891, 2037, 3393
BarI	GAAGNNNNNNTAC	2 cut(s)	2955, 2987
BbrPI	CACGTG	1 cut(s)	2765
BbsI	GAAGAC	3 cut(s)	843, 1239, 3111
Bbv12I	GWGCWC	3 cut(s)	1891, 3047, 3254
BccI	CCATC	5 cut(s)	1496, 1645, 2132, 2883, 3284
BceAI	ACGGC	1 cut(s)	2608
BcgI	CGANNNNNNTGC	2 cut(s)	297, 331
BciT130I	CCWGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
BciVI	GTATCC	2 cut(s)	898, 2948
BclI	TGATCA	3 cut(s)	2041, 3055, 3270
BcoDI	GTCTC	3 cut(s)	202, 941, 3012
BfaI	CTAG	5 cut(s)	447, 1064, 2244, 2804, 2831
BfmI	CTRYAG	5 cut(s)	1016, 1701, 2122, 2742, 2811
BfoI	RGCGCY	1 cut(s)	166
BfrI	CTTAAG	1 cut(s)	1897
BfuAI	ACCTGC	2 cut(s)	282, 2294
BfuI	GTATCC	2 cut(s)	898, 2948
BglII	AGATCT	1 cut(s)	2507
BlpI	GCTNAGC	1 cut(s)	3149
BmcAI	AGTACT	2 cut(s)	1707, 2082
Bme1390I	CCNGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
Bme18I	GGWCC	1 cut(s)	908
BmeRI	GACNNNNNGTC	1 cut(s)	2212
BmeT110I	CYCGRG	1 cut(s)	1929
BmgT120I	GGNCC	5 cut(s)	372, 373, 908, 1960, 2943
BmiI	GGNNCC	7 cut(s)	348, 374, 395, 713, 1095, 1623, 2577
BmrFI	CCNGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
BmrI	ACTGGG	1 cut(s)	1563
BmsI	GCATC	7 cut(s)	117, 242, 940, 962, 2643, 2935, 3199
BmuI	ACTGGG	1 cut(s)	1563
BpiI	GAAGAC	3 cut(s)	843, 1239, 3111
BplI	GAGNNNNNCTC	2 cut(s)	1652, 1684
BpmI	CTGGAG	2 cut(s)	1958, 2079
Bpu10I	CCTNAGC	1 cut(s)	495
Bpu1102I	GCTNAGC	1 cut(s)	3149
Bpu14I	TTCGAA	1 cut(s)	192
BpuEI	CTTGAG	2 cut(s)	143, 1694
Bsa29I	ATCGAT	1 cut(s)	317
BsaAI	YACGTR	1 cut(s)	2765
BsaBI	GATNNNNATC	3 cut(s)	351, 1260, 3275
BsaHI	GRCGYC	2 cut(s)	44, 75
BsaJI	CCNNGG	5 cut(s)	183, 184, 384, 528, 2096
BsaWI	WCCGGW	2 cut(s)	60, 2046
BsaXI	ACNNNNNCTCC	2 cut(s)	2154, 2184
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 390, 2585, 2755, 2951
Bse118I	RCCGGY	1 cut(s)	2046
Bse1I	ACTGG	8 cut(s)	972, 1088, 1287, 1296, 1486, 1569, 1854, 3188
Bse21I	CCTNAGG	1 cut(s)	213
Bse3DI	GCAATG	3 cut(s)	308, 1299, 2853
Bse8I	GATNNNNATC	3 cut(s)	351, 1260, 3275
BseAI	TCCGGA	1 cut(s)	60
BseBI	CCWGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
BseCI	ATCGAT	1 cut(s)	317
BseDI	CCNNGG	5 cut(s)	183, 184, 384, 528, 2096
BseGI	GGATG	8 cut(s)	1025, 1507, 1656, 1683, 2233, 2335, 2926, 2986
BseJI	GATNNNNATC	3 cut(s)	351, 1260, 3275
BseLI	CCNNNNNNNGG	5 cut(s)	14, 390, 2585, 2755, 2951
BseMI	GCAATG	3 cut(s)	308, 1299, 2853
BseMII	CTCAG	5 cut(s)	227, 368, 2223, 2408, 2613
BseNI	ACTGG	8 cut(s)	972, 1088, 1287, 1296, 1486, 1569, 1854, 3188
BsePI	GCGCGC	1 cut(s)	1407
BseRI	GAGGAG	2 cut(s)	105, 1955
BseSI	GKGCMC	2 cut(s)	376, 3047
BseYI	CCCAGC	1 cut(s)	1962
BsgI	GTGCAG	3 cut(s)	485, 1074, 1614
Bsh1236I	CGCG	3 cut(s)	479, 530, 1409
BshFI	GGCC	6 cut(s)	374, 482, 1853, 1961, 2142, 2944
BshNI	GGYRCC	2 cut(s)	1093, 1621
BshTI	ACCGGT	1 cut(s)	2046
BshVI	ATCGAT	1 cut(s)	317
BsiHKAI	GWGCWC	3 cut(s)	1891, 3047, 3254
BsiHKCI	CYCGRG	1 cut(s)	1929
BsiSI	CCGG	3 cut(s)	61, 2047, 2724
BslI	CCNNNNNNNGG	5 cut(s)	14, 390, 2585, 2755, 2951
BsmAI	GTCTC	3 cut(s)	202, 941, 3012
BsnI	GGCC	6 cut(s)	374, 482, 1853, 1961, 2142, 2944
BsoBI	CYCGRG	1 cut(s)	1929
Bsp119I	TTCGAA	1 cut(s)	192
Bsp120I	GGGCCC	1 cut(s)	372
Bsp1286I	GDGCHC	6 cut(s)	376, 1891, 2037, 3047, 3254, 3393
Bsp13I	TCCGGA	1 cut(s)	60
Bsp1407I	TGTACA	2 cut(s)	1022, 1078
Bsp1720I	GCTNAGC	1 cut(s)	3149
Bsp19I	CCATGG	1 cut(s)	384
BspACI	CCGC	9 cut(s)	389, 432, 479, 528, 530, 597, 1127, 1991, 2941
BspANI	GGCC	6 cut(s)	374, 482, 1853, 1961, 2142, 2944
BspCNI	CTCAG	5 cut(s)	226, 369, 2222, 2407, 2614
BspDI	ATCGAT	1 cut(s)	317
BspEI	TCCGGA	1 cut(s)	60
BspFNI	CGCG	3 cut(s)	479, 530, 1409
BspHI	TCATGA	2 cut(s)	939, 1573
BspLI	GGNNCC	7 cut(s)	348, 374, 395, 713, 1095, 1623, 2577
BspMAI	CTGCAG	1 cut(s)	1020
BspMI	ACCTGC	2 cut(s)	282, 2294
BspQI	GCTCTTC	3 cut(s)	495, 1255, 2976
BspT104I	TTCGAA	1 cut(s)	192
BspT107I	GGYRCC	2 cut(s)	1093, 1621
BspTI	CTTAAG	1 cut(s)	1897
BsrDI	GCAATG	3 cut(s)	308, 1299, 2853
BsrFI	RCCGGY	1 cut(s)	2046
BsrGI	TGTACA	2 cut(s)	1022, 1078
BsrI	ACTGG	8 cut(s)	972, 1088, 1287, 1296, 1486, 1569, 1854, 3188
BssAI	RCCGGY	1 cut(s)	2046
BssECI	CCNNGG	5 cut(s)	183, 184, 384, 528, 2096
BssHII	GCGCGC	1 cut(s)	1407
BssNI	GRCGYC	2 cut(s)	44, 75
BssT1I	CCWWGG	1 cut(s)	384
Bst2UI	CCWGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
BstACI	GRCGYC	2 cut(s)	44, 75
BstAFI	CTTAAG	1 cut(s)	1897
BstAPI	GCANNNNNTGC	2 cut(s)	508, 2309
BstAUI	TGTACA	2 cut(s)	1022, 1078
BstBAI	YACGTR	1 cut(s)	2765
BstBI	TTCGAA	1 cut(s)	192
BstC8I	GCNNGC	6 cut(s)	167, 171, 1409, 1626, 1794, 3242
BstDSI	CCRYGG	2 cut(s)	384, 528
BstF5I	GGATG	8 cut(s)	1025, 1507, 1656, 1683, 2233, 2335, 2926, 2986
BstFNI	CGCG	3 cut(s)	479, 530, 1409
BstH2I	RGCGCY	1 cut(s)	166
BstHHI	GCGC	8 cut(s)	20, 165, 479, 513, 723, 1409, 1411, 2133
BstMAI	GTCTC	3 cut(s)	202, 941, 3012
BstNI	CCWGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
BstNSI	RCATGY	3 cut(s)	407, 1440, 1796
BstSCI	CCNGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
BstSFI	CTRYAG	5 cut(s)	1016, 1701, 2122, 2742, 2811
BstSLI	GKGCMC	2 cut(s)	376, 3047
BstUI	CGCG	3 cut(s)	479, 530, 1409
BstV2I	GAAGAC	3 cut(s)	843, 1239, 3111
BstX2I	RGATCY	9 cut(s)	346, 393, 451, 711, 1008, 1357, 1561, 2507, 2575
BstXI	CCANNNNNNTGG	2 cut(s)	1038, 1957
BstYI	RGATCY	9 cut(s)	346, 393, 451, 711, 1008, 1357, 1561, 2507, 2575
Bsu15I	ATCGAT	1 cut(s)	317
Bsu36I	CCTNAGG	1 cut(s)	213
BsuI	GTATCC	2 cut(s)	898, 2948
BsuRI	GGCC	6 cut(s)	374, 482, 1853, 1961, 2142, 2944
BsuTUI	ATCGAT	1 cut(s)	317
BtgI	CCRYGG	2 cut(s)	384, 528
BtgZI	GCGATG	4 cut(s)	94, 163, 219, 2337
BtsCI	GGATG	8 cut(s)	1025, 1507, 1656, 1683, 2233, 2335, 2926, 2986
BtsI	GCAGTG	4 cut(s)	1025, 2290, 2299, 3160
BtsIMutI	CAGTG	6 cut(s)	1025, 1081, 2290, 2299, 3051, 3160
BveI	ACCTGC	2 cut(s)	282, 2294
Cac8I	GCNNGC	6 cut(s)	167, 171, 1409, 1626, 1794, 3242
CaiI	CAGNNNCTG	3 cut(s)	1073, 2216, 2309
CciI	TCATGA	2 cut(s)	939, 1573
CfoI	GCGC	8 cut(s)	20, 165, 479, 513, 723, 1409, 1411, 2133
Cfr10I	RCCGGY	1 cut(s)	2046
Cfr13I	GGNCC	5 cut(s)	372, 373, 908, 1960, 2943
Cfr42I	CCGCGG	1 cut(s)	531
ClaI	ATCGAT	1 cut(s)	317
CseI	GACGC	3 cut(s)	33, 83, 284
CsiI	ACCWGGT	1 cut(s)	2836
Csp6I	GTAC	8 cut(s)	69, 780, 1023, 1061, 1079, 1225, 1706, 2081
CspAI	ACCGGT	1 cut(s)	2046
CspCI	CAANNNNNGTGG	4 cut(s)	557, 592, 1149, 1184
CviQI	GTAC	8 cut(s)	69, 780, 1023, 1061, 1079, 1225, 1706, 2081
DraI	TTTAAA	1 cut(s)	1608
DriI	GACNNNNNGTC	1 cut(s)	2212
EaeI	YGGCCR	2 cut(s)	480, 1851
Eam1105I	GACNNNNNGTC	1 cut(s)	2212
Ecl136II	GAGCTC	1 cut(s)	1889
Eco130I	CCWWGG	1 cut(s)	384
Eco24I	GRGCYC	4 cut(s)	376, 1891, 2037, 3393
Eco47I	GGWCC	1 cut(s)	908
Eco53kI	GAGCTC	1 cut(s)	1889
Eco57I	CTGAAG	4 cut(s)	1236, 1719, 2469, 2496
Eco72I	CACGTG	1 cut(s)	2765
Eco81I	CCTNAGG	1 cut(s)	213
Eco88I	CYCGRG	1 cut(s)	1929
EcoICRI	GAGCTC	1 cut(s)	1889
EcoO109I	RGGNCCY	1 cut(s)	373
EcoRI	GAATTC	1 cut(s)	787
EcoRII	CCWGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
EcoT14I	CCWWGG	1 cut(s)	384
EcoT22I	ATGCAT	1 cut(s)	955
EcoT38I	GRGCYC	4 cut(s)	376, 1891, 2037, 3393
ErhI	CCWWGG	1 cut(s)	384
FauI	CCCGC	2 cut(s)	382, 523
FauNDI	CATATG	2 cut(s)	1403, 2188
FbaI	TGATCA	3 cut(s)	2041, 3055, 3270
FblI	GTMKAC	3 cut(s)	47, 400, 2745
FokI	GGATG	8 cut(s)	1012, 1514, 1663, 1670, 2240, 2322, 2913, 2993
FriOI	GRGCYC	4 cut(s)	376, 1891, 2037, 3393
FspBI	CTAG	5 cut(s)	447, 1064, 2244, 2804, 2831
GlaI	GCGC	8 cut(s)	19, 164, 478, 512, 722, 1408, 1410, 2132
GsaI	CCCAGC	1 cut(s)	1966
GsuI	CTGGAG	2 cut(s)	1958, 2079
HaeII	RGCGCY	1 cut(s)	166
HaeIII	GGCC	6 cut(s)	374, 482, 1853, 1961, 2142, 2944
HapII	CCGG	3 cut(s)	61, 2047, 2724
HgaI	GACGC	3 cut(s)	33, 83, 284
HhaI	GCGC	8 cut(s)	20, 165, 479, 513, 723, 1409, 1411, 2133
Hin1I	GRCGYC	2 cut(s)	44, 75
Hin6I	GCGC	8 cut(s)	18, 163, 477, 511, 721, 1407, 1409, 2131
HinP1I	GCGC	8 cut(s)	18, 163, 477, 511, 721, 1407, 1409, 2131
HincII	GTYRAC	3 cut(s)	48, 1815, 1914
HindII	GTYRAC	3 cut(s)	48, 1815, 1914
HindIII	AAGCTT	4 cut(s)	1272, 1754, 2751, 3242
HpaII	CCGG	3 cut(s)	61, 2047, 2724
Hpy99I	CGWCG	2 cut(s)	49, 92
HpyAV	CCTTC	9 cut(s)	328, 899, 1218, 2066, 2312, 2677, 3001, 3033, 3058
HpyCH4IV	ACGT	3 cut(s)	228, 1182, 2764
HpySE526I	ACGT	3 cut(s)	228, 1182, 2764
Hsp92I	GRCGYC	2 cut(s)	44, 75
HspAI	GCGC	8 cut(s)	18, 163, 477, 511, 721, 1407, 1409, 2131
Kpn2I	TCCGGA	1 cut(s)	60
Ksp22I	TGATCA	3 cut(s)	2041, 3055, 3270
KspI	CCGCGG	1 cut(s)	531
LguI	GCTCTTC	3 cut(s)	495, 1255, 2976
LmnI	GCTCC	2 cut(s)	118, 2098
LweI	GCATC	7 cut(s)	117, 242, 940, 962, 2643, 2935, 3199
MabI	ACCWGGT	1 cut(s)	2836
MaeI	CTAG	5 cut(s)	447, 1064, 2244, 2804, 2831
MaeII	ACGT	3 cut(s)	228, 1182, 2764
MaeIII	GTNAC	5 cut(s)	845, 1178, 2170, 2191, 3086
MfeI	CAATTG	1 cut(s)	1951
MflI	RGATCY	9 cut(s)	346, 393, 451, 711, 1008, 1357, 1561, 2507, 2575
MhlI	GDGCHC	6 cut(s)	376, 1891, 2037, 3047, 3254, 3393
MlsI	TGGCCA	1 cut(s)	1853
MluNI	TGGCCA	1 cut(s)	1853
MlyI	GAGTC	5 cut(s)	131, 2178, 2201, 2222, 3014
MmeI	TCCRAC	4 cut(s)	1725, 2341, 3051, 3288
Mox20I	TGGCCA	1 cut(s)	1853
Mph1103I	ATGCAT	1 cut(s)	955
MroI	TCCGGA	1 cut(s)	60
MscI	TGGCCA	1 cut(s)	1853
MslI	CAYNNNNRTG	3 cut(s)	958, 1036, 3402
Msp20I	TGGCCA	1 cut(s)	1853
MspA1I	CMGCKG	6 cut(s)	434, 530, 599, 914, 1070, 1129
MspCI	CTTAAG	1 cut(s)	1897
MspI	CCGG	3 cut(s)	61, 2047, 2724
MspR9I	CCNGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
MunI	CAATTG	1 cut(s)	1951
MvaI	CCWGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
MvnI	CGCG	3 cut(s)	479, 530, 1409
NcoI	CCATGG	1 cut(s)	384
NdeI	CATATG	2 cut(s)	1403, 2188
NlaIV	GGNNCC	7 cut(s)	348, 374, 395, 713, 1095, 1623, 2577
NmuCI	GTSAC	3 cut(s)	845, 2170, 3086
NsiI	ATGCAT	1 cut(s)	955
NspI	RCATGY	3 cut(s)	407, 1440, 1796
NspV	TTCGAA	1 cut(s)	192
PaeI	GCATGC	1 cut(s)	1796
PaeR7I	CTCGAG	1 cut(s)	1929
PagI	TCATGA	2 cut(s)	939, 1573
PasI	CCCWGGG	1 cut(s)	184
PauI	GCGCGC	1 cut(s)	1407
PciI	ACATGT	1 cut(s)	403
PciSI	GCTCTTC	3 cut(s)	495, 1255, 2976
PcsI	WCGNNNNNNNCGW	1 cut(s)	93
PinAI	ACCGGT	1 cut(s)	2046
PleI	GAGTC	5 cut(s)	131, 2177, 2201, 2221, 3013
PmaCI	CACGTG	1 cut(s)	2765
PmlI	CACGTG	1 cut(s)	2765
PpsI	GAGTC	5 cut(s)	131, 2177, 2201, 2221, 3013
Ppu21I	YACGTR	1 cut(s)	2765
PscI	ACATGT	1 cut(s)	403
PshBI	ATTAAT	1 cut(s)	321
PsiI	TTATAA	1 cut(s)	651
Psp124BI	GAGCTC	1 cut(s)	1891
Psp1406I	AACGTT	1 cut(s)	1182
Psp6I	CCWGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
PspCI	CACGTG	1 cut(s)	2765
PspFI	CCCAGC	1 cut(s)	1962
PspGI	CCWGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
PspN4I	GGNNCC	7 cut(s)	348, 374, 395, 713, 1095, 1623, 2577
PspOMI	GGGCCC	1 cut(s)	372
PspPI	GGNCC	5 cut(s)	372, 373, 908, 1960, 2943
PstI	CTGCAG	1 cut(s)	1020
PstNI	CAGNNNCTG	3 cut(s)	1073, 2216, 2309
PsuI	RGATCY	9 cut(s)	346, 393, 451, 711, 1008, 1357, 1561, 2507, 2575
PteI	GCGCGC	1 cut(s)	1407
PvuII	CAGCTG	2 cut(s)	914, 1070
RsaI	GTAC	8 cut(s)	70, 781, 1024, 1062, 1080, 1226, 1707, 2082
RsaNI	GTAC	8 cut(s)	69, 780, 1023, 1061, 1079, 1225, 1706, 2081
RseI	CAYNNNNRTG	3 cut(s)	958, 1036, 3402
SacI	GAGCTC	1 cut(s)	1891
SacII	CCGCGG	1 cut(s)	531
SalI	GTCGAC	1 cut(s)	46
SapI	GCTCTTC	3 cut(s)	495, 1255, 2976
Sau96I	GGNCC	5 cut(s)	372, 373, 908, 1960, 2943
ScaI	AGTACT	2 cut(s)	1707, 2082
SchI	GAGTC	5 cut(s)	131, 2178, 2201, 2222, 3014
ScrFI	CCNGG	6 cut(s)	185, 2061, 2097, 2463, 2838, 2864
SduI	GDGCHC	6 cut(s)	376, 1891, 2037, 3047, 3254, 3393
SexAI	ACCWGGT	1 cut(s)	2836
SfaNI	GCATC	7 cut(s)	117, 242, 940, 962, 2643, 2935, 3199
SfcI	CTRYAG	5 cut(s)	1016, 1701, 2122, 2742, 2811
Sfr274I	CTCGAG	1 cut(s)	1929
Sfr303I	CCGCGG	1 cut(s)	531
SfuI	TTCGAA	1 cut(s)	192
SgrBI	CCGCGG	1 cut(s)	531
SinI	GGWCC	1 cut(s)	908
SlaI	CTCGAG	1 cut(s)	1929
SmiMI	CAYNNNNRTG	3 cut(s)	958, 1036, 3402
SmlI	CTYRAG	4 cut(s)	158, 1709, 1897, 1929
SmoI	CTYRAG	4 cut(s)	158, 1709, 1897, 1929
SphI	GCATGC	1 cut(s)	1796
SsiI	CCGC	9 cut(s)	389, 432, 479, 528, 530, 597, 1127, 1991, 2941
SspI	AATATT	2 cut(s)	555, 883
SspMI	CTAG	5 cut(s)	447, 1064, 2244, 2804, 2831
SstI	GAGCTC	1 cut(s)	1891
StyD4I	CCNGG	6 cut(s)	183, 2059, 2095, 2461, 2836, 2862
StyI	CCWWGG	1 cut(s)	384
TaiI	ACGT	3 cut(s)	231, 1185, 2767
TaqI	TCGA	7 cut(s)	47, 135, 192, 317, 1885, 1930, 3204
TatI	WGTACW	7 cut(s)	779, 1022, 1060, 1078, 1224, 1705, 2080
TauI	GCSGC	5 cut(s)	434, 482, 599, 1129, 2944
TscAI	CASTG	6 cut(s)	1025, 1088, 2290, 2299, 3058, 3160
TseFI	GTSAC	3 cut(s)	845, 2170, 3086
Tsp45I	GTSAC	3 cut(s)	845, 2170, 3086
TspGWI	ACGGA	5 cut(s)	86, 345, 386, 601, 2492
TspRI	CASTG	6 cut(s)	1025, 1088, 2290, 2299, 3058, 3160
Vha464I	CTTAAG	1 cut(s)	1897
VneI	GTGCAC	1 cut(s)	3043
VpaK11BI	GGWCC	1 cut(s)	908
VspI	ATTAAT	1 cut(s)	321
XbaI	TCTAGA	1 cut(s)	2830
XceI	RCATGY	3 cut(s)	407, 1440, 1796
XhoI	CTCGAG	1 cut(s)	1929
XmiI	GTMKAC	3 cut(s)	47, 400, 2745
XspI	CTAG	5 cut(s)	447, 1064, 2244, 2804, 2831
ZrmI	AGTACT	2 cut(s)	1707, 2082
Zsp2I	ATGCAT	1 cut(s)	955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.