Uroporphyrinogen decarboxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40490 |
| fragaria_vesca | FvH4_7g25624 FvH4_7g25624 FvH4_7g25624 |
| malus_domestica | MD01G1163500.v1.1 MD07G1231500.v1.1 |
| prunus_persica | Prupe.2G261500_v2.0.a1 |
| pyrus_communis | pycom01g17810 pycom07g20930 |
| rosa_chinensis | RchiOBHm_Chr1g0371761 |
| rosa_laevigata | RLG00000026943 |
| rosa_multiflora | Rmu_sc0001755.1_g000052 |
| rosa_roxburghii | Rroxscaffold_4G00285440 |
| rosa_rugosa | Rorug01G0366300 |
| rosa_samantha | Rh1AG376200 Rh1BG339600 Rh1CG352700 Rh1DG370800 |
| rosa_wichuraiana | Rw1G033100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 302 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 506 |
| AccI | GTMKAC | 1 cut(s) | 964 |
| AciI | CCGC | 2 cut(s) | 155, 170 |
| AclWI | GGATC | 5 cut(s) | 66, 431, 889, 1001, 1014 |
| AcoI | YGGCCR | 1 cut(s) | 1102 |
| AcsI | RAATTY | 4 cut(s) | 309, 476, 686, 797 |
| AcuI | CTGAAG | 2 cut(s) | 665, 978 |
| AfaI | GTAC | 2 cut(s) | 230, 1123 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 204, 383, 506 |
| AgsI | TTSAA | 6 cut(s) | 191, 337, 817, 995, 1029, 1096 |
| AjnI | CCWGG | 2 cut(s) | 323, 1009 |
| Alw21I | GWGCWC | 3 cut(s) | 109, 739, 777 |
| Alw26I | GTCTC | 3 cut(s) | 809, 836, 1078 |
| Alw44I | GTGCAC | 1 cut(s) | 105 |
| AlwI | GGATC | 5 cut(s) | 66, 431, 889, 1001, 1014 |
| AoxI | GGCC | 3 cut(s) | 194, 765, 1102 |
| ApaLI | GTGCAC | 1 cut(s) | 105 |
| ApeKI | GCWGC | 1 cut(s) | 551 |
| ApoI | RAATTY | 4 cut(s) | 309, 476, 686, 797 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 332, 480 |
| AspLEI | GCGC | 1 cut(s) | 83 |
| AspS9I | GGNCC | 5 cut(s) | 195, 422, 664, 765, 977 |
| AsuC2I | CCSGG | 1 cut(s) | 385 |
| AsuHPI | GGTGA | 3 cut(s) | 45, 1033, 1075 |
| AvaII | GGWCC | 3 cut(s) | 422, 664, 977 |
| AxyI | CCTNAGG | 1 cut(s) | 1128 |
| BaeGI | GKGCMC | 1 cut(s) | 109 |
| BalI | TGGCCA | 1 cut(s) | 1104 |
| BamHI | GGATCC | 1 cut(s) | 1006 |
| BanII | GRGCYC | 3 cut(s) | 577, 739, 777 |
| Bbv12I | GWGCWC | 3 cut(s) | 109, 739, 777 |
| BbvCI | CCTCAGC | 1 cut(s) | 453 |
| BbvI | GCAGC | 1 cut(s) | 563 |
| BccI | CCATC | 2 cut(s) | 824, 855 |
| BceAI | ACGGC | 1 cut(s) | 37 |
| BciT130I | CCWGG | 2 cut(s) | 325, 1011 |
| BciVI | GTATCC | 1 cut(s) | 273 |
| BclI | TGATCA | 1 cut(s) | 463 |
| BcnI | CCSGG | 1 cut(s) | 385 |
| BcoDI | GTCTC | 3 cut(s) | 809, 836, 1078 |
| BfaI | CTAG | 1 cut(s) | 560 |
| BfmI | CTRYAG | 1 cut(s) | 317 |
| BfuI | GTATCC | 1 cut(s) | 273 |
| BglII | AGATCT | 1 cut(s) | 853 |
| BisI | GCNGC | 2 cut(s) | 155, 552 |
| BlpI | GCTNAGC | 2 cut(s) | 150, 776 |
| BlsI | GCNGC | 2 cut(s) | 156, 553 |
| Bme1390I | CCNGG | 3 cut(s) | 325, 385, 1011 |
| Bme18I | GGWCC | 3 cut(s) | 422, 664, 977 |
| BmgT120I | GGNCC | 5 cut(s) | 195, 422, 664, 765, 977 |
| BmiI | GGNNCC | 6 cut(s) | 25, 197, 423, 576, 978, 1008 |
| BmrFI | CCNGG | 3 cut(s) | 325, 385, 1011 |
| BmrI | ACTGGG | 2 cut(s) | 194, 983 |
| BmsI | GCATC | 2 cut(s) | 68, 599 |
| BmuI | ACTGGG | 2 cut(s) | 194, 983 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 453 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 150, 776 |
| BpuEI | CTTGAG | 3 cut(s) | 471, 723, 917 |
| BpuMI | CCSGG | 1 cut(s) | 385 |
| BsaBI | GATNNNNATC | 1 cut(s) | 462 |
| BsaI | GGTCTC | 1 cut(s) | 836 |
| BsaJI | CCNNGG | 2 cut(s) | 323, 1105 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 105, 135 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 204, 383, 506 |
| Bse1I | ACTGG | 3 cut(s) | 200, 944, 978 |
| Bse21I | CCTNAGG | 1 cut(s) | 1128 |
| Bse8I | GATNNNNATC | 1 cut(s) | 462 |
| BseBI | CCWGG | 2 cut(s) | 325, 1011 |
| BseDI | CCNNGG | 2 cut(s) | 323, 1105 |
| BseGI | GGATG | 4 cut(s) | 393, 463, 835, 847 |
| BseJI | GATNNNNATC | 1 cut(s) | 462 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 204, 383, 506 |
| BseMII | CTCAG | 4 cut(s) | 141, 444, 790, 1119 |
| BseNI | ACTGG | 3 cut(s) | 200, 944, 978 |
| BseRI | GAGGAG | 4 cut(s) | 40, 89, 366, 1145 |
| BseSI | GKGCMC | 1 cut(s) | 109 |
| BseXI | GCAGC | 1 cut(s) | 563 |
| BshFI | GGCC | 3 cut(s) | 196, 767, 1104 |
| BsiHKAI | GWGCWC | 3 cut(s) | 109, 739, 777 |
| BsiSI | CCGG | 1 cut(s) | 384 |
| BslFI | GGGAC | 2 cut(s) | 194, 990 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 204, 383, 506 |
| BsmAI | GTCTC | 3 cut(s) | 809, 836, 1078 |
| BsmFI | GGGAC | 2 cut(s) | 194, 990 |
| BsmI | GAATGC | 1 cut(s) | 9 |
| BsnI | GGCC | 3 cut(s) | 196, 767, 1104 |
| Bso31I | GGTCTC | 1 cut(s) | 836 |
| Bsp1286I | GDGCHC | 4 cut(s) | 109, 577, 739, 777 |
| Bsp143I | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 150, 776 |
| Bsp19I | CCATGG | 1 cut(s) | 1105 |
| BspACI | CCGC | 2 cut(s) | 155, 170 |
| BspANI | GGCC | 3 cut(s) | 196, 767, 1104 |
| BspCNI | CTCAG | 4 cut(s) | 142, 445, 789, 1120 |
| BspHI | TCATGA | 1 cut(s) | 210 |
| BspLI | GGNNCC | 6 cut(s) | 25, 197, 423, 576, 978, 1008 |
| BspPI | GGATC | 5 cut(s) | 66, 431, 889, 1001, 1014 |
| BspTNI | GGTCTC | 1 cut(s) | 836 |
| BsrI | ACTGG | 3 cut(s) | 200, 944, 978 |
| BssECI | CCNNGG | 2 cut(s) | 323, 1105 |
| BssMI | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| BssT1I | CCWWGG | 1 cut(s) | 1105 |
| Bst2UI | CCWGG | 2 cut(s) | 325, 1011 |
| Bst4CI | ACNGT | 2 cut(s) | 946, 1063 |
| Bst6I | CTCTTC | 1 cut(s) | 230 |
| BstC8I | GCNNGC | 2 cut(s) | 219, 906 |
| BstDEI | CTNAG | 5 cut(s) | 93, 150, 453, 776, 1128 |
| BstDSI | CCRYGG | 1 cut(s) | 1105 |
| BstF5I | GGATG | 4 cut(s) | 393, 463, 835, 847 |
| BstHHI | GCGC | 1 cut(s) | 83 |
| BstKTI | GATC | 6 cut(s) | 74, 439, 466, 856, 884, 1009 |
| BstMAI | GTCTC | 3 cut(s) | 809, 836, 1078 |
| BstMBI | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 15, 160, 214, 901 |
| BstNI | CCWGG | 2 cut(s) | 325, 1011 |
| BstSCI | CCNGG | 3 cut(s) | 323, 383, 1009 |
| BstSFI | CTRYAG | 1 cut(s) | 317 |
| BstSLI | GKGCMC | 1 cut(s) | 109 |
| BstV1I | GCAGC | 1 cut(s) | 563 |
| BstX2I | RGATCY | 4 cut(s) | 71, 853, 881, 1006 |
| BstYI | RGATCY | 4 cut(s) | 71, 853, 881, 1006 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1128 |
| BsuI | GTATCC | 1 cut(s) | 273 |
| BsuRI | GGCC | 3 cut(s) | 196, 767, 1104 |
| BtgI | CCRYGG | 1 cut(s) | 1105 |
| BtsCI | GGATG | 4 cut(s) | 393, 463, 835, 847 |
| BtsI | GCAGTG | 1 cut(s) | 561 |
| BtsIMutI | CAGTG | 1 cut(s) | 561 |
| Cac8I | GCNNGC | 2 cut(s) | 219, 906 |
| CciI | TCATGA | 1 cut(s) | 210 |
| CfoI | GCGC | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 5 cut(s) | 195, 422, 664, 765, 977 |
| Csp6I | GTAC | 2 cut(s) | 229, 1122 |
| CviAII | CATG | 5 cut(s) | 211, 232, 671, 762, 1106 |
| CviQI | GTAC | 2 cut(s) | 229, 1122 |
| DdeI | CTNAG | 5 cut(s) | 93, 150, 453, 776, 1128 |
| DpnI | GATC | 6 cut(s) | 73, 438, 465, 855, 883, 1008 |
| DpnII | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 302 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 302 |
| EaeI | YGGCCR | 1 cut(s) | 1102 |
| Eam1104I | CTCTTC | 1 cut(s) | 230 |
| EarI | CTCTTC | 1 cut(s) | 230 |
| Ecl136II | GAGCTC | 2 cut(s) | 737, 775 |
| Eco130I | CCWWGG | 1 cut(s) | 1105 |
| Eco24I | GRGCYC | 3 cut(s) | 577, 739, 777 |
| Eco31I | GGTCTC | 1 cut(s) | 836 |
| Eco47I | GGWCC | 3 cut(s) | 422, 664, 977 |
| Eco53kI | GAGCTC | 2 cut(s) | 737, 775 |
| Eco57I | CTGAAG | 2 cut(s) | 665, 978 |
| Eco81I | CCTNAGG | 1 cut(s) | 1128 |
| EcoICRI | GAGCTC | 2 cut(s) | 737, 775 |
| EcoO109I | RGGNCCY | 3 cut(s) | 195, 422, 664 |
| EcoRI | GAATTC | 1 cut(s) | 797 |
| EcoRII | CCWGG | 2 cut(s) | 323, 1009 |
| EcoT14I | CCWWGG | 1 cut(s) | 1105 |
| EcoT22I | ATGCAT | 1 cut(s) | 676 |
| EcoT38I | GRGCYC | 3 cut(s) | 577, 739, 777 |
| ErhI | CCWWGG | 1 cut(s) | 1105 |
| FaeI | CATG | 5 cut(s) | 214, 235, 674, 765, 1109 |
| FaqI | GGGAC | 2 cut(s) | 194, 990 |
| FatI | CATG | 5 cut(s) | 210, 231, 670, 761, 1105 |
| FauNDI | CATATG | 1 cut(s) | 502 |
| FbaI | TGATCA | 1 cut(s) | 463 |
| FblI | GTMKAC | 1 cut(s) | 964 |
| Fnu4HI | GCNGC | 2 cut(s) | 155, 552 |
| FokI | GGATG | 4 cut(s) | 400, 470, 834, 842 |
| FriOI | GRGCYC | 3 cut(s) | 577, 739, 777 |
| Fsp4HI | GCNGC | 2 cut(s) | 155, 552 |
| FspBI | CTAG | 1 cut(s) | 560 |
| GlaI | GCGC | 1 cut(s) | 82 |
| GluI | GCNGC | 2 cut(s) | 155, 552 |
| HaeIII | GGCC | 3 cut(s) | 196, 767, 1104 |
| HapII | CCGG | 1 cut(s) | 384 |
| HhaI | GCGC | 1 cut(s) | 83 |
| Hin1II | CATG | 5 cut(s) | 214, 235, 674, 765, 1109 |
| Hin6I | GCGC | 1 cut(s) | 81 |
| HinP1I | GCGC | 1 cut(s) | 81 |
| HincII | GTYRAC | 1 cut(s) | 295 |
| HindII | GTYRAC | 1 cut(s) | 295 |
| HinfI | GANTC | 5 cut(s) | 348, 491, 758, 1096, 1167 |
| HpaII | CCGG | 1 cut(s) | 384 |
| HphI | GGTGA | 3 cut(s) | 45, 1033, 1075 |
| Hpy166II | GTNNAC | 4 cut(s) | 107, 295, 965, 1124 |
| Hpy188I | TCNGA | 6 cut(s) | 113, 286, 364, 684, 750, 1172 |
| Hpy188III | TCNNGA | 5 cut(s) | 75, 211, 275, 488, 851 |
| Hpy8I | GTNNAC | 4 cut(s) | 107, 295, 965, 1124 |
| Hpy99I | CGWCG | 2 cut(s) | 271, 972 |
| HpyAV | CCTTC | 7 cut(s) | 46, 66, 322, 599, 655, 658, 953 |
| HpyCH4III | ACNGT | 2 cut(s) | 946, 1063 |
| HpyCH4V | TGCA | 5 cut(s) | 9, 107, 590, 674, 875 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 15, 160, 214, 901 |
| HpyF3I | CTNAG | 5 cut(s) | 93, 150, 453, 776, 1128 |
| Hsp92II | CATG | 5 cut(s) | 214, 235, 674, 765, 1109 |
| HspAI | GCGC | 1 cut(s) | 81 |
| Ksp22I | TGATCA | 1 cut(s) | 463 |
| Kzo9I | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| LmnI | GCTCC | 4 cut(s) | 29, 102, 580, 734 |
| Lsp1109I | GCAGC | 1 cut(s) | 563 |
| LweI | GCATC | 2 cut(s) | 68, 599 |
| MaeI | CTAG | 1 cut(s) | 560 |
| MaeIII | GTNAC | 2 cut(s) | 136, 1063 |
| MalI | GATC | 6 cut(s) | 73, 438, 465, 855, 883, 1008 |
| MboI | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| MboII | GAAGA | 2 cut(s) | 81, 247 |
| MflI | RGATCY | 4 cut(s) | 71, 853, 881, 1006 |
| MhlI | GDGCHC | 4 cut(s) | 109, 577, 739, 777 |
| MlsI | TGGCCA | 1 cut(s) | 1104 |
| MluCI | AATT | 5 cut(s) | 309, 476, 686, 797, 822 |
| MluNI | TGGCCA | 1 cut(s) | 1104 |
| MlyI | GAGTC | 3 cut(s) | 357, 500, 752 |
| Mox20I | TGGCCA | 1 cut(s) | 1104 |
| Mph1103I | ATGCAT | 1 cut(s) | 676 |
| MroXI | GAANNNNTTC | 2 cut(s) | 332, 480 |
| MscI | TGGCCA | 1 cut(s) | 1104 |
| MseI | TTAA | 2 cut(s) | 636, 863 |
| Msp20I | TGGCCA | 1 cut(s) | 1104 |
| MspA1I | CMGCKG | 1 cut(s) | 452 |
| MspI | CCGG | 1 cut(s) | 384 |
| MspR9I | CCNGG | 3 cut(s) | 325, 385, 1011 |
| Mva1269I | GAATGC | 1 cut(s) | 9 |
| MvaI | CCWGG | 2 cut(s) | 325, 1011 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 15, 160, 214, 901 |
| NciI | CCSGG | 1 cut(s) | 385 |
| NcoI | CCATGG | 1 cut(s) | 1105 |
| NdeI | CATATG | 1 cut(s) | 502 |
| NdeII | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| NlaIII | CATG | 5 cut(s) | 214, 235, 674, 765, 1109 |
| NlaIV | GGNNCC | 6 cut(s) | 25, 197, 423, 576, 978, 1008 |
| NmuCI | GTSAC | 1 cut(s) | 1063 |
| NsiI | ATGCAT | 1 cut(s) | 676 |
| PagI | TCATGA | 1 cut(s) | 210 |
| PctI | GAATGC | 1 cut(s) | 9 |
| PdmI | GAANNNNTTC | 2 cut(s) | 332, 480 |
| PfeI | GAWTC | 2 cut(s) | 1096, 1167 |
| PflFI | GACNNNGTC | 1 cut(s) | 347 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 506 |
| PfoI | TCCNGGA | 1 cut(s) | 383 |
| PkrI | GCNGC | 2 cut(s) | 156, 553 |
| PleI | GAGTC | 3 cut(s) | 356, 499, 752 |
| PpsI | GAGTC | 3 cut(s) | 356, 499, 752 |
| PpuMI | RGGWCCY | 2 cut(s) | 422, 664 |
| Psp124BI | GAGCTC | 2 cut(s) | 739, 777 |
| Psp5II | RGGWCCY | 2 cut(s) | 422, 664 |
| Psp6I | CCWGG | 2 cut(s) | 323, 1009 |
| PspGI | CCWGG | 2 cut(s) | 323, 1009 |
| PspN4I | GGNNCC | 6 cut(s) | 25, 197, 423, 576, 978, 1008 |
| PspPI | GGNCC | 5 cut(s) | 195, 422, 664, 765, 977 |
| PspPPI | RGGWCCY | 2 cut(s) | 422, 664 |
| PsuI | RGATCY | 4 cut(s) | 71, 853, 881, 1006 |
| PsyI | GACNNNGTC | 1 cut(s) | 347 |
| PvuII | CAGCTG | 1 cut(s) | 452 |
| RsaI | GTAC | 2 cut(s) | 230, 1123 |
| RsaNI | GTAC | 2 cut(s) | 229, 1122 |
| SacI | GAGCTC | 2 cut(s) | 739, 777 |
| SaqAI | TTAA | 2 cut(s) | 636, 863 |
| SatI | GCNGC | 2 cut(s) | 155, 552 |
| Sau3AI | GATC | 6 cut(s) | 71, 436, 463, 853, 881, 1006 |
| Sau96I | GGNCC | 5 cut(s) | 195, 422, 664, 765, 977 |
| SchI | GAGTC | 3 cut(s) | 357, 500, 752 |
| ScrFI | CCNGG | 3 cut(s) | 325, 385, 1011 |
| SduI | GDGCHC | 4 cut(s) | 109, 577, 739, 777 |
| SfaNI | GCATC | 2 cut(s) | 68, 599 |
| SfcI | CTRYAG | 1 cut(s) | 317 |
| SinI | GGWCC | 3 cut(s) | 422, 664, 977 |
| SmlI | CTYRAG | 3 cut(s) | 486, 738, 896 |
| SmoI | CTYRAG | 3 cut(s) | 486, 738, 896 |
| Sse9I | AATT | 5 cut(s) | 309, 476, 686, 797, 822 |
| SsiI | CCGC | 2 cut(s) | 155, 170 |
| SspI | AATATT | 1 cut(s) | 432 |
| SspMI | CTAG | 1 cut(s) | 560 |
| SstI | GAGCTC | 2 cut(s) | 739, 777 |
| StyD4I | CCNGG | 3 cut(s) | 323, 383, 1009 |
| StyI | CCWWGG | 1 cut(s) | 1105 |
| TaaI | ACNGT | 2 cut(s) | 946, 1063 |
| TaqI | TCGA | 3 cut(s) | 306, 698, 715 |
| TasI | AATT | 5 cut(s) | 309, 476, 686, 797, 822 |
| TauI | GCSGC | 1 cut(s) | 157 |
| TfiI | GAWTC | 2 cut(s) | 1096, 1167 |
| Tru1I | TTAA | 2 cut(s) | 636, 863 |
| Tru9I | TTAA | 2 cut(s) | 636, 863 |
| TscAI | CASTG | 1 cut(s) | 561 |
| TseFI | GTSAC | 1 cut(s) | 1063 |
| TseI | GCWGC | 1 cut(s) | 551 |
| Tsp45I | GTSAC | 1 cut(s) | 1063 |
| TspDTI | ATGAA | 4 cut(s) | 248, 404, 603, 1027 |
| TspGWI | ACGGA | 2 cut(s) | 255, 360 |
| TspRI | CASTG | 1 cut(s) | 561 |
| Tth111I | GACNNNGTC | 1 cut(s) | 347 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 506 |
| VneI | GTGCAC | 1 cut(s) | 105 |
| VpaK11BI | GGWCC | 3 cut(s) | 422, 664, 977 |
| XapI | RAATTY | 4 cut(s) | 309, 476, 686, 797 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 728 |
| XmiI | GTMKAC | 1 cut(s) | 964 |
| XmnI | GAANNNNTTC | 2 cut(s) | 332, 480 |
| XspI | CTAG | 1 cut(s) | 560 |
| Zsp2I | ATGCAT | 1 cut(s) | 676 |