Prupe.2G266700_v2.0.a1

Hydroxyacylglutathione hydrolase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0017173
Physical Location & Seq
Forward (+)
27301102 .. 27304315
3214 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G266700.1

Sequence Viewer

Length: 777 bp
ATGAAAATCCACCACGTTGCTTGCTTGGAGGACAACTACGCATACCTAATCATTGACGAGAGTACCAAAGAAGCTGCAGCTGTGGATCCAGTTGAGCCTGAAAAGGTTCTTAAAGCAGCTCAAGAACATGGCGTTGATATCAAGCTCGTCCTCACCACTCACCACCACTGGGATCACGCTGGTGGAAATGAGAAGATAAAGCAGCTGGTGCCGGGGATTAAGATATATGGTGGTTCTATTGATAATGTAAAGGGCTGCACTGATAAGGTGGACAACGGTGATAAGATTTCTCTCGGGGCTGATGTTCATATACTGTCTCTTCACACACCTTGCCACACTAAAGGTCACATAAGCTATTATGTGACTAACAAAGAGGGAGATGACCCAACTGTTTTTACTGGAGACACACTGTTTATTGCGGGTTGTGGTAAATTTTTCGAAGGAACAGCAGAACAGATGCATCAGTCGCTATGCGTGACTTTGGGTTCATTGCCAAAGCCAACACGAGTTTACTGTGGCCATGAGTACACAGTGAAGAACTTGCAATTTGCTCTGACAGTTGAACCAGGCAATGAGAAAATAAAGCAGAAGTTATCATGGGCACAGAAGCAGCGGGAAACAGGCCTCCCCACAGTTCCTTCAACCATTGAGGAAGAGATGGAGACGAACCCTTTTATGCGGGCTGATCTACCAGAGCTTCAGGAGAGGGTTGGTTGCAAAACTGCTGTTGAAGCTCTGCGTGAAATAAGGCAGAGGAAGGACACCTGGAGGGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00620 map00620
Pfam Domains
Protein Families
HAGH_C Lactamase_B

Protein Analysis

259

Amino Acids

28.71

Weight (kDa)

6.0

Isoelectric Point (pI)

30.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017173)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G10850
fragaria_vesca FvH4_7g26250 FvH4_7g26250
malus_domestica MD01G1171200.v1.1
prunus_persica Prupe.2G266700_v2.0.a1
pyrus_communis pycom01g18340
rosa_chinensis RchiOBHm_Chr1g0372701
rosa_laevigata RLG00000026878
rosa_multiflora Rmu_sc0034231.1_g000002
rosa_roxburghii Rroxscaffold_4G00284740
rosa_rugosa Rorug01G0373800
rosa_samantha Rh1BG346000
rosa_wichuraiana Rw1G033650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 208
AciI CCGC 3 cut(s) 419, 613, 679
AclWI GGATC 3 cut(s) 80, 93, 180
AcoI YGGCCR 1 cut(s) 517
AcsI RAATTY 1 cut(s) 431
AcuI CTGAAG 1 cut(s) 683
AfaI GTAC 2 cut(s) 64, 527
AfiI CCNNNNNNNGG 1 cut(s) 169
AgsI TTSAA 3 cut(s) 563, 642, 731
AjnI CCWGG 2 cut(s) 565, 764
AleI CACNNNNGTG 1 cut(s) 180
AluBI AGCT 8 cut(s) 74, 80, 119, 145, 205, 354, 697, 734
AluI AGCT 8 cut(s) 74, 80, 119, 145, 205, 354, 697, 734
Alw26I GTCTC 3 cut(s) 321, 396, 656
AlwI GGATC 3 cut(s) 80, 93, 180
Ama87I CYCGRG 1 cut(s) 293
AoxI GGCC 2 cut(s) 517, 622
ApeKI GCWGC 6 cut(s) 74, 77, 116, 202, 255, 610
ApoI RAATTY 1 cut(s) 431
Asp700I GAANNNNTTC 1 cut(s) 105
AsuC2I CCSGG 1 cut(s) 213
AsuHPI GGTGA 3 cut(s) 145, 152, 290
AsuII TTCGAA 1 cut(s) 438
AvaI CYCGRG 1 cut(s) 293
BaeGI GKGCMC 1 cut(s) 604
BaeI ACNNNNGTAYC 2 cut(s) 46, 79
BalI TGGCCA 1 cut(s) 519
BamHI GGATCC 1 cut(s) 85
BanI GGYRCC 1 cut(s) 208
BauI CACGAG 1 cut(s) 504
BbvI GCAGC 6 cut(s) 61, 89, 128, 214, 242, 622
BccI CCATC 1 cut(s) 652
BciT130I CCWGG 2 cut(s) 567, 766
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 3 cut(s) 321, 396, 656
BfmI CTRYAG 1 cut(s) 75
BisI GCNGC 6 cut(s) 75, 78, 117, 203, 256, 611
BlsI GCNGC 6 cut(s) 76, 79, 118, 204, 257, 612
Bme1390I CCNGG 3 cut(s) 213, 567, 766
BmeT110I CYCGRG 1 cut(s) 293
BmiI GGNNCC 2 cut(s) 87, 210
BmrFI CCNGG 3 cut(s) 213, 567, 766
BmrI ACTGGG 1 cut(s) 178
BmsI GCATC 2 cut(s) 447, 469
BmuI ACTGGG 1 cut(s) 178
BpmI CTGGAG 1 cut(s) 420
Bpu14I TTCGAA 1 cut(s) 438
BpuEI CTTGAG 1 cut(s) 105
BpuMI CCSGG 1 cut(s) 213
BsaJI CCNNGG 1 cut(s) 212
Bsc4I CCNNNNNNNGG 1 cut(s) 169
Bse1I ACTGG 3 cut(s) 89, 173, 403
Bse3DI GCAATG 2 cut(s) 488, 577
BseBI CCWGG 2 cut(s) 567, 766
BseDI CCNNGG 1 cut(s) 212
BseLI CCNNNNNNNGG 1 cut(s) 169
BseMI GCAATG 2 cut(s) 488, 577
BseNI ACTGG 3 cut(s) 89, 173, 403
BseSI GKGCMC 1 cut(s) 604
BseXI GCAGC 6 cut(s) 61, 89, 128, 214, 242, 622
BsgI GTGCAG 1 cut(s) 241
BshFI GGCC 2 cut(s) 519, 624
BshNI GGYRCC 1 cut(s) 208
BsiHKCI CYCGRG 1 cut(s) 293
BsiSI CCGG 1 cut(s) 212
BslI CCNNNNNNNGG 1 cut(s) 169
BsmAI GTCTC 3 cut(s) 321, 396, 656
BsmBI CGTCTC 1 cut(s) 656
BsnI GGCC 2 cut(s) 519, 624
BsoBI CYCGRG 1 cut(s) 293
Bsp119I TTCGAA 1 cut(s) 438
Bsp1286I GDGCHC 1 cut(s) 604
Bsp143I GATC 3 cut(s) 85, 172, 685
BspACI CCGC 3 cut(s) 419, 613, 679
BspANI GGCC 2 cut(s) 519, 624
BspLI GGNNCC 2 cut(s) 87, 210
BspMAI CTGCAG 1 cut(s) 79
BspPI GGATC 3 cut(s) 80, 93, 180
BspT104I TTCGAA 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 208
BsrDI GCAATG 2 cut(s) 488, 577
BsrI ACTGG 3 cut(s) 89, 173, 403
BssECI CCNNGG 1 cut(s) 212
BssMI GATC 3 cut(s) 85, 172, 685
BssSI CACGAG 1 cut(s) 504
Bst2BI CACGAG 1 cut(s) 504
Bst2UI CCWGG 2 cut(s) 567, 766
Bst4CI ACNGT 8 cut(s) 278, 315, 391, 411, 515, 532, 559, 634
Bst6I CTCTTC 2 cut(s) 324, 648
BstAPI GCANNNNNTGC 1 cut(s) 208
BstBI TTCGAA 1 cut(s) 438
BstC8I GCNNGC 2 cut(s) 22, 681
BstKTI GATC 3 cut(s) 88, 175, 688
BstMAI GTCTC 3 cut(s) 321, 396, 656
BstMBI GATC 3 cut(s) 85, 172, 685
BstMWI GCNNNNNNNGC 3 cut(s) 208, 466, 731
BstNI CCWGG 2 cut(s) 567, 766
BstSCI CCNGG 3 cut(s) 211, 565, 764
BstSFI CTRYAG 1 cut(s) 75
BstSLI GKGCMC 1 cut(s) 604
BstV1I GCAGC 6 cut(s) 61, 89, 128, 214, 242, 622
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BsuRI GGCC 2 cut(s) 519, 624
BtsIMutI CAGTG 4 cut(s) 166, 258, 407, 537
Cac8I GCNNGC 2 cut(s) 22, 681
Csp6I GTAC 2 cut(s) 63, 526
CspCI CAANNNNNGTGG 1 cut(s) 37
CviAII CATG 3 cut(s) 128, 521, 597
CviQI GTAC 2 cut(s) 63, 526
DpnI GATC 3 cut(s) 87, 174, 687
DpnII GATC 3 cut(s) 85, 172, 685
EaeI YGGCCR 1 cut(s) 517
Eam1104I CTCTTC 2 cut(s) 324, 648
EarI CTCTTC 2 cut(s) 324, 648
Eco147I AGGCCT 1 cut(s) 624
Eco32I GATATC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 683
Eco88I CYCGRG 1 cut(s) 293
EcoRII CCWGG 2 cut(s) 565, 764
EcoRV GATATC 1 cut(s) 139
EcoT22I ATGCAT 1 cut(s) 462
Esp3I CGTCTC 1 cut(s) 656
FaeI CATG 3 cut(s) 131, 524, 600
FatI CATG 3 cut(s) 127, 520, 596
FauI CCCGC 3 cut(s) 412, 606, 672
Fnu4HI GCNGC 6 cut(s) 75, 78, 117, 203, 256, 611
Fsp4HI GCNGC 6 cut(s) 75, 78, 117, 203, 256, 611
GluI GCNGC 6 cut(s) 75, 78, 117, 203, 256, 611
GsuI CTGGAG 1 cut(s) 420
HaeIII GGCC 2 cut(s) 519, 624
HapII CCGG 1 cut(s) 212
Hin1II CATG 3 cut(s) 131, 524, 600
HpaII CCGG 1 cut(s) 212
HphI GGTGA 3 cut(s) 145, 152, 290
Hpy166II GTNNAC 3 cut(s) 271, 511, 528
Hpy188I TCNGA 1 cut(s) 555
Hpy188III TCNNGA 2 cut(s) 122, 701
Hpy8I GTNNAC 3 cut(s) 271, 511, 528
HpyAV CCTTC 3 cut(s) 434, 648, 751
HpyCH4III ACNGT 8 cut(s) 278, 315, 391, 411, 515, 532, 559, 634
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 5 cut(s) 77, 258, 460, 544, 717
HpyF10VI GCNNNNNNNGC 3 cut(s) 208, 466, 731
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 3 cut(s) 131, 524, 600
Kzo9I GATC 3 cut(s) 85, 172, 685
Lsp1109I GCAGC 6 cut(s) 61, 89, 128, 214, 242, 622
LweI GCATC 2 cut(s) 447, 469
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 3 cut(s) 344, 361, 475
MalI GATC 3 cut(s) 87, 174, 687
MboI GATC 3 cut(s) 85, 172, 685
MboII GAAGA 4 cut(s) 205, 311, 547, 665
MflI RGATCY 1 cut(s) 85
MhlI GDGCHC 1 cut(s) 604
MlsI TGGCCA 1 cut(s) 519
MluCI AATT 2 cut(s) 431, 545
MluNI TGGCCA 1 cut(s) 519
MnlI CCTC 8 cut(s) 22, 161, 367, 635, 643, 699, 747, 762
Mox20I TGGCCA 1 cut(s) 519
Mph1103I ATGCAT 1 cut(s) 462
MroXI GAANNNNTTC 1 cut(s) 105
MscI TGGCCA 1 cut(s) 519
MseI TTAA 2 cut(s) 111, 219
MslI CAYNNNNRTG 1 cut(s) 180
Msp20I TGGCCA 1 cut(s) 519
MspA1I CMGCKG 3 cut(s) 80, 205, 613
MspI CCGG 1 cut(s) 212
MspR9I CCNGG 3 cut(s) 213, 567, 766
MvaI CCWGG 2 cut(s) 567, 766
MwoI GCNNNNNNNGC 3 cut(s) 208, 466, 731
NciI CCSGG 1 cut(s) 213
NdeII GATC 3 cut(s) 85, 172, 685
NlaIII CATG 3 cut(s) 131, 524, 600
NlaIV GGNNCC 2 cut(s) 87, 210
NmuCI GTSAC 3 cut(s) 344, 361, 475
NsiI ATGCAT 1 cut(s) 462
NspV TTCGAA 1 cut(s) 438
OliI CACNNNNGTG 1 cut(s) 180
PceI AGGCCT 1 cut(s) 624
PdmI GAANNNNTTC 1 cut(s) 105
PkrI GCNGC 6 cut(s) 76, 79, 118, 204, 257, 612
Psp6I CCWGG 2 cut(s) 565, 764
PspGI CCWGG 2 cut(s) 565, 764
PspN4I GGNNCC 2 cut(s) 87, 210
PstI CTGCAG 1 cut(s) 79
PsuI RGATCY 1 cut(s) 85
PvuII CAGCTG 2 cut(s) 80, 205
RsaI GTAC 2 cut(s) 64, 527
RsaNI GTAC 2 cut(s) 63, 526
RseI CAYNNNNRTG 1 cut(s) 180
SaqAI TTAA 2 cut(s) 111, 219
SatI GCNGC 6 cut(s) 75, 78, 117, 203, 256, 611
Sau3AI GATC 3 cut(s) 85, 172, 685
ScrFI CCNGG 3 cut(s) 213, 567, 766
SduI GDGCHC 1 cut(s) 604
SfaNI GCATC 2 cut(s) 447, 469
SfcI CTRYAG 1 cut(s) 75
SfuI TTCGAA 1 cut(s) 438
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 1 cut(s) 120
SmoI CTYRAG 1 cut(s) 120
Sse9I AATT 2 cut(s) 431, 545
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 3 cut(s) 419, 613, 679
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 3 cut(s) 211, 565, 764
TaaI ACNGT 8 cut(s) 278, 315, 391, 411, 515, 532, 559, 634
TaiI ACGT 1 cut(s) 18
TaqI TCGA 1 cut(s) 438
TasI AATT 2 cut(s) 431, 545
TatI WGTACW 1 cut(s) 525
Tru1I TTAA 2 cut(s) 111, 219
Tru9I TTAA 2 cut(s) 111, 219
TscAI CASTG 4 cut(s) 173, 265, 414, 537
TseFI GTSAC 3 cut(s) 344, 361, 475
TseI GCWGC 6 cut(s) 74, 77, 116, 202, 255, 610
Tsp45I GTSAC 3 cut(s) 344, 361, 475
TspDTI ATGAA 3 cut(s) 17, 296, 477
TspRI CASTG 4 cut(s) 173, 265, 414, 537
XapI RAATTY 1 cut(s) 431
XmnI GAANNNNTTC 1 cut(s) 105
Zsp2I ATGCAT 1 cut(s) 462
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.