Late embryogenesis abundant protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53730 |
| fragaria_vesca | FvH4_7g32930 |
| malus_domestica | MD01G1228300.v1.1 MD07G1299200.v1.1 |
| prunus_persica | Prupe.2G319000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0382891 |
| rosa_laevigata | RLG00000026151 |
| rosa_multiflora | Rmu_co8420301.1_g000001 Rmu_sc0010366.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00277800 |
| rosa_rugosa | Rorug01G0437100 |
| rosa_samantha | Rh1AG462100 Rh1BG419200 Rh1CG432800 Rh1DG451200 |
| rosa_wichuraiana | Rw1G040970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 377 |
| AccI | GTMKAC | 1 cut(s) | 463 |
| AciI | CCGC | 2 cut(s) | 210, 306 |
| AcoI | YGGCCR | 1 cut(s) | 211 |
| AfaI | GTAC | 1 cut(s) | 533 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 428 |
| AgsI | TTSAA | 1 cut(s) | 603 |
| AjnI | CCWGG | 1 cut(s) | 84 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 149, 181 |
| AluBI | AGCT | 7 cut(s) | 67, 79, 196, 238, 292, 389, 458 |
| AluI | AGCT | 7 cut(s) | 67, 79, 196, 238, 292, 389, 458 |
| Alw26I | GTCTC | 2 cut(s) | 9, 526 |
| AoxI | GGCC | 2 cut(s) | 211, 605 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 376, 408 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 80 |
| AspS9I | GGNCC | 2 cut(s) | 572, 590 |
| AsuC2I | CCSGG | 1 cut(s) | 526 |
| AsuHPI | GGTGA | 1 cut(s) | 625 |
| AvaII | GGWCC | 2 cut(s) | 572, 590 |
| BbsI | GAAGAC | 1 cut(s) | 375 |
| BccI | CCATC | 2 cut(s) | 495, 688 |
| BciT130I | CCWGG | 1 cut(s) | 86 |
| BcnI | CCSGG | 1 cut(s) | 526 |
| BcoDI | GTCTC | 2 cut(s) | 9, 526 |
| BisI | GCNGC | 2 cut(s) | 211, 306 |
| BlsI | GCNGC | 2 cut(s) | 212, 307 |
| Bme1390I | CCNGG | 2 cut(s) | 86, 526 |
| Bme18I | GGWCC | 2 cut(s) | 572, 590 |
| BmgT120I | GGNCC | 2 cut(s) | 572, 590 |
| BmiI | GGNNCC | 1 cut(s) | 420 |
| BmrFI | CCNGG | 2 cut(s) | 86, 526 |
| BoxI | GACNNNNGTC | 1 cut(s) | 518 |
| BpiI | GAAGAC | 1 cut(s) | 375 |
| BpuMI | CCSGG | 1 cut(s) | 526 |
| BsaI | GGTCTC | 1 cut(s) | 526 |
| BsaJI | CCNNGG | 1 cut(s) | 358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 7, 37 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 428 |
| Bse1I | ACTGG | 2 cut(s) | 471, 592 |
| Bse3DI | GCAATG | 1 cut(s) | 382 |
| BseBI | CCWGG | 1 cut(s) | 86 |
| BseDI | CCNNGG | 1 cut(s) | 358 |
| BseGI | GGATG | 3 cut(s) | 646, 699, 703 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 428 |
| BseMI | GCAATG | 1 cut(s) | 382 |
| BseMII | CTCAG | 3 cut(s) | 44, 219, 644 |
| BseNI | ACTGG | 2 cut(s) | 471, 592 |
| BseRI | GAGGAG | 2 cut(s) | 217, 716 |
| BsgI | GTGCAG | 1 cut(s) | 131 |
| BshFI | GGCC | 2 cut(s) | 213, 607 |
| BsiSI | CCGG | 1 cut(s) | 525 |
| BslFI | GGGAC | 1 cut(s) | 526 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 428 |
| BsmAI | GTCTC | 2 cut(s) | 9, 526 |
| BsmFI | GGGAC | 1 cut(s) | 526 |
| BsnI | GGCC | 2 cut(s) | 213, 607 |
| Bso31I | GGTCTC | 1 cut(s) | 526 |
| Bsp143I | GATC | 1 cut(s) | 486 |
| BspACI | CCGC | 2 cut(s) | 210, 306 |
| BspANI | GGCC | 2 cut(s) | 213, 607 |
| BspCNI | CTCAG | 3 cut(s) | 45, 218, 643 |
| BspLI | GGNNCC | 1 cut(s) | 420 |
| BspTNI | GGTCTC | 1 cut(s) | 526 |
| BsrDI | GCAATG | 1 cut(s) | 382 |
| BsrI | ACTGG | 2 cut(s) | 471, 592 |
| BssECI | CCNNGG | 1 cut(s) | 358 |
| BssMI | GATC | 1 cut(s) | 486 |
| BssT1I | CCWWGG | 1 cut(s) | 358 |
| Bst2UI | CCWGG | 1 cut(s) | 86 |
| Bst4CI | ACNGT | 3 cut(s) | 35, 331, 551 |
| Bst6I | CTCTTC | 2 cut(s) | 348, 616 |
| BstDEI | CTNAG | 3 cut(s) | 53, 205, 630 |
| BstF5I | GGATG | 3 cut(s) | 646, 699, 703 |
| BstKTI | GATC | 1 cut(s) | 489 |
| BstMAI | GTCTC | 2 cut(s) | 9, 526 |
| BstMBI | GATC | 1 cut(s) | 486 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 145, 244, 563 |
| BstNI | CCWGG | 1 cut(s) | 86 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 518 |
| BstSCI | CCNGG | 2 cut(s) | 84, 524 |
| BstV2I | GAAGAC | 1 cut(s) | 375 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 272, 458 |
| BsuRI | GGCC | 2 cut(s) | 213, 607 |
| BtsCI | GGATG | 3 cut(s) | 646, 699, 703 |
| BtsIMutI | CAGTG | 2 cut(s) | 31, 327 |
| Cfr13I | GGNCC | 2 cut(s) | 572, 590 |
| Csp6I | GTAC | 1 cut(s) | 532 |
| CviAII | CATG | 3 cut(s) | 365, 562, 756 |
| CviQI | GTAC | 1 cut(s) | 532 |
| DdeI | CTNAG | 3 cut(s) | 53, 205, 630 |
| DpnI | GATC | 1 cut(s) | 488 |
| DpnII | GATC | 1 cut(s) | 486 |
| DraI | TTTAAA | 1 cut(s) | 474 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 377 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 377 |
| EaeI | YGGCCR | 1 cut(s) | 211 |
| Eam1104I | CTCTTC | 2 cut(s) | 348, 616 |
| EarI | CTCTTC | 2 cut(s) | 348, 616 |
| Eco130I | CCWWGG | 1 cut(s) | 358 |
| Eco31I | GGTCTC | 1 cut(s) | 526 |
| Eco32I | GATATC | 1 cut(s) | 187 |
| Eco47I | GGWCC | 2 cut(s) | 572, 590 |
| EcoRII | CCWGG | 1 cut(s) | 84 |
| EcoRV | GATATC | 1 cut(s) | 187 |
| EcoT14I | CCWWGG | 1 cut(s) | 358 |
| ErhI | CCWWGG | 1 cut(s) | 358 |
| FaeI | CATG | 3 cut(s) | 368, 565, 759 |
| FaiI | YATR | 8 cut(s) | 125, 303, 310, 366, 435, 563, 650, 757 |
| FaqI | GGGAC | 1 cut(s) | 526 |
| FatI | CATG | 3 cut(s) | 364, 561, 755 |
| FblI | GTMKAC | 1 cut(s) | 463 |
| Fnu4HI | GCNGC | 2 cut(s) | 211, 306 |
| FokI | GGATG | 3 cut(s) | 653, 706, 710 |
| Fsp4HI | GCNGC | 2 cut(s) | 211, 306 |
| GluI | GCNGC | 2 cut(s) | 211, 306 |
| HaeIII | GGCC | 2 cut(s) | 213, 607 |
| HapII | CCGG | 1 cut(s) | 525 |
| Hin1II | CATG | 3 cut(s) | 368, 565, 759 |
| HincII | GTYRAC | 1 cut(s) | 320 |
| HindII | GTYRAC | 1 cut(s) | 320 |
| HinfI | GANTC | 1 cut(s) | 653 |
| HpaII | CCGG | 1 cut(s) | 525 |
| HphI | GGTGA | 1 cut(s) | 625 |
| Hpy166II | GTNNAC | 6 cut(s) | 320, 334, 464, 541, 547, 593 |
| Hpy188I | TCNGA | 1 cut(s) | 633 |
| Hpy188III | TCNNGA | 3 cut(s) | 382, 490, 511 |
| Hpy8I | GTNNAC | 6 cut(s) | 320, 334, 464, 541, 547, 593 |
| Hpy99I | CGWCG | 1 cut(s) | 290 |
| HpyAV | CCTTC | 5 cut(s) | 227, 361, 499, 585, 679 |
| HpyCH4III | ACNGT | 3 cut(s) | 35, 331, 551 |
| HpyCH4IV | ACGT | 1 cut(s) | 543 |
| HpyCH4V | TGCA | 1 cut(s) | 148 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 145, 244, 563 |
| HpyF3I | CTNAG | 3 cut(s) | 53, 205, 630 |
| HpySE526I | ACGT | 1 cut(s) | 543 |
| Hsp92II | CATG | 3 cut(s) | 368, 565, 759 |
| Kzo9I | GATC | 1 cut(s) | 486 |
| LmnI | GCTCC | 1 cut(s) | 424 |
| MaeII | ACGT | 1 cut(s) | 543 |
| MaeIII | GTNAC | 1 cut(s) | 446 |
| MalI | GATC | 1 cut(s) | 488 |
| MboI | GATC | 1 cut(s) | 486 |
| MboII | GAAGA | 3 cut(s) | 335, 380, 633 |
| MluCI | AATT | 2 cut(s) | 111, 676 |
| MnlI | CCTC | 8 cut(s) | 23, 212, 238, 357, 433, 486, 488, 694 |
| MroXI | GAANNNNTTC | 1 cut(s) | 80 |
| MseI | TTAA | 3 cut(s) | 294, 473, 675 |
| MspA1I | CMGCKG | 1 cut(s) | 458 |
| MspI | CCGG | 1 cut(s) | 525 |
| MspR9I | CCNGG | 2 cut(s) | 86, 526 |
| MvaI | CCWGG | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 145, 244, 563 |
| NciI | CCSGG | 1 cut(s) | 526 |
| NdeII | GATC | 1 cut(s) | 486 |
| NlaIII | CATG | 3 cut(s) | 368, 565, 759 |
| NlaIV | GGNNCC | 1 cut(s) | 420 |
| NmuCI | GTSAC | 1 cut(s) | 446 |
| PdmI | GAANNNNTTC | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 653 |
| PfoI | TCCNGGA | 1 cut(s) | 524 |
| PkrI | GCNGC | 2 cut(s) | 212, 307 |
| PshAI | GACNNNNGTC | 1 cut(s) | 518 |
| Psp6I | CCWGG | 1 cut(s) | 84 |
| PspGI | CCWGG | 1 cut(s) | 84 |
| PspN4I | GGNNCC | 1 cut(s) | 420 |
| PspPI | GGNCC | 2 cut(s) | 572, 590 |
| PvuII | CAGCTG | 1 cut(s) | 458 |
| RsaI | GTAC | 1 cut(s) | 533 |
| RsaNI | GTAC | 1 cut(s) | 532 |
| SaqAI | TTAA | 3 cut(s) | 294, 473, 675 |
| SatI | GCNGC | 2 cut(s) | 211, 306 |
| Sau3AI | GATC | 1 cut(s) | 486 |
| Sau96I | GGNCC | 2 cut(s) | 572, 590 |
| ScrFI | CCNGG | 2 cut(s) | 86, 526 |
| SinI | GGWCC | 2 cut(s) | 572, 590 |
| SmlI | CTYRAG | 1 cut(s) | 6 |
| SmoI | CTYRAG | 1 cut(s) | 6 |
| Sse9I | AATT | 2 cut(s) | 111, 676 |
| SsiI | CCGC | 2 cut(s) | 210, 306 |
| StyD4I | CCNGG | 2 cut(s) | 84, 524 |
| StyI | CCWWGG | 1 cut(s) | 358 |
| TaaI | ACNGT | 3 cut(s) | 35, 331, 551 |
| TaiI | ACGT | 1 cut(s) | 546 |
| TaqI | TCGA | 1 cut(s) | 499 |
| TasI | AATT | 2 cut(s) | 111, 676 |
| TatI | WGTACW | 1 cut(s) | 531 |
| TauI | GCSGC | 2 cut(s) | 213, 308 |
| TfiI | GAWTC | 1 cut(s) | 653 |
| Tru1I | TTAA | 3 cut(s) | 294, 473, 675 |
| Tru9I | TTAA | 3 cut(s) | 294, 473, 675 |
| TscAI | CASTG | 2 cut(s) | 38, 334 |
| TseFI | GTSAC | 1 cut(s) | 446 |
| Tsp45I | GTSAC | 1 cut(s) | 446 |
| TspDTI | ATGAA | 2 cut(s) | 381, 450 |
| TspRI | CASTG | 2 cut(s) | 38, 334 |
| VpaK11BI | GGWCC | 2 cut(s) | 572, 590 |
| XmiI | GTMKAC | 1 cut(s) | 463 |
| XmnI | GAANNNNTTC | 1 cut(s) | 80 |