Prupe.2G324800_v2.0.a1

Chromosome region maintenance protein 1 exportin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
30034731 .. 30045931
11201 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G324800.1

Sequence Viewer

Length: 3234 bp
ATGGCGGCCGAGAAGCTTAGGGACTTGAGCCAACCGATTGACGTCGGCTTGCTCGATGCCACCGTCGCTGCCTTCTACGGCACCGGATCTAAGGAGGAGAGGACAGCTGCAGACCATATATTGCGGGACTTGCAGAACAATCCGGATATGTGGCTTCAAGTTGTGCACATTTTACAGAGCGCCAAGAACCTAAACACCAAGTTCTTTGCCTTGCAGGTCCTAGAAGGGGTTATCAAGTATAGGTGGAATGCATTACCTGTTGAACAGCGAGATGGAATGAAAAATTATATATCTGACGTCATTGTTCAGCTATCAAGTAATGAGGCCTCTTTTCGAATGGAGAGACTGTATGTCAACAAACTCAATATTATATTGGTTCAGATTTTGAAGCATGATTGGCCCGCTAGATGGCGAAGCTTTATACCGGATCTCGTTTCAGCAGCTAAAACTAGTGAAACAATTTGTGAGAATTGTATGGCCATATTGAAACTTCTAAGTGAAGAGGTTTTTGACTTCTCAAGGGGGGAAATGACTCAGCTGAAGATTAAAGAGCTTAAACAATCATTGAACAGTGAGTTTCAACTCATTCATGAGTTATGCCTTTATGTACTATCAGCGTCTCAAAGAGCCGAGCTCATACGTGCGACATTATCCACATTGCATGCTTTCCTCTCGTGGATTCCCTTGGGTTATATATTTGAGTCCCCTTTGCTTGAAACCCTTCTAAAATTTTTTCCGATGCCTTCTTACCGGAATCTCACCATTCAGTGTTTAACGGAGGTTGCAGCACTTAGTTTTGGTGAATTCTACAATGCACAGTATGTTAAGATGTATAATATATTCATGGTCCAGTTACAGACTATTCTCCCATCTACAACAAACATCCCTCAAGCTTATGCAAATGGATCTAGCGATGAACAGGCATTCATTCAGAACTTGGCACTGTTTCTCACTTCGTTTAACAAGTCACATATTCGTGTGCTTGAAACCACACAAGAGAATATAGCTGCGTTGCTGATGGGTCTTGAATATCTAATAAACATCTCATATGTGGATGACACTGAAGTTTTTAAGGTTTGCTTAGACTATTGGAATTCCTTGGTTTTGGAATTGTTTGAGGCGCATCATAATTTGGATAACCCTGCAGCAACTGCAAATATGATGGGGCTGCAGCAGATGAATTTGCTTCCTGGTATGGTTGATGGCCTTGGCTCACAGATTATGCAAAGGCGGCAAATATATGCCAGTATTATGTCAAAGTTGAGGTTGCTCATGATCTGTCGAATGGCTAAGCCAGAAGAGGTTCTCATTGTTGAAGATGAGAATGGGAACATTGTTCGCGAGACCTTGAAGGACAATGATGTTCTTGTTCAATATAAGATCATGAGGGAGACACTGATATATTTGTCACACCTTGACCATGAGGACACTGAGAAGCAGATGCTAAAGAAATTAAGCAAGCAACTCAGTGGTGAGGATTGGGCATGGAACAACTTAAACACCTTATGCTGGGCAATAGGGTCCATATCTGGTTCCATGATGGAAGAACAAGAAAATAGATTTTTGGTGATGGTCATACGCGACTTGCTGAATTTATGTGAAATCATAAAAGGGAAAGATAACAAAGCAGTTATTGCTAGCAACATTATGTATGTTGTTGGACAATACCCAAGGTTTTTAAGAGCTCATTGGAAGTTCCTAAAGACTGTTGTGAATAAGTTGTTTGAGTTTATGCATGAAACCCATCCCGGAGTTCAGGATATGGCCTGTGACACATTCCTGAAAATTGTTCAGAAGTGCAAGCGTAAATTTGTTATTGTACAGCTTGGAGAAAATGAACCATTTGTGTCTGAACTCCTGACAGGCCTGCCAACAACTGTTGCCGATCTTGAGCCTCACCAGATTCATACTTTTTATGAAGCTGTTGGTAATATGATTCAAGCAGAATCTGACCCTCAAAAGAGGGATGAATATCTACAGAGATTGATGAATCTCCCAAATCAGAAATGGGCAGAGATTATAGGGCAAGCACGCTTGAGTGTTGATTTCCTCAAGGATCAGGAGGTTATTCGCACCGTGCTTAATATATTACAGACAAATACTAGCGTTGCCAGCTCCCTTGGAACGTTTTTCCTGAGTCAGATTTCATTGATCTTTCTGGACATGCTTAATGTGTACAGGATGTACAGTGAGCTCGTATCTAGTAGCATTGCAGAAGGGGGTCCCTTCGCTTCTAAGACATCCTATGTGAAACTTTTACGGTCGGTAAAGAGGGAGACTCTCAAGCTGATTGAGACATTCTTGGACAAGGCCGAAGACCAAGCACATATAGGAAAACAAATTGTCCCTCCAATGTTGGATCCGGTTCTCGGTGACTATGCCAGGAATTTGCCTGATGCTAGAGAGTCGGAGGTTTTGTCACTTTTTGCCACAATTATAAATAAGTACAAGGGTGCAATGATAGATGATGTGCCTCGAATATTTGAAGCTGTTTTCCAGTGCACATTGGAGATGATTACCAAAAATTTTGAAGATTACCCAGAGCATCGCCTGAAGTTCTTCTCTTTACTTCGTGCAATTGCTGCTCATTGTTTTCCTGCATTGATTCGGTTATCAAGTCCGCAACTGAAGCTTGTAATGGATTCAATTATATGGGCGTTTCGGCACACAGAAAGGAACATTGCGGAAACAGGGCTGAACCTGTTGTTGGAGATGCTGAAGAACTTTCAGAAGTCGGAGTTCTGTAATCAATTTTACCGTACATACTTTTTGACAATCGAACAAGAAATCTTTGCTGTCTTGACGGACACGTTTCATAAGCCTGGGTTCAAGTTGCATGTCTTGGTGCTCCAACATTTATTTTGCCTGGTGGAAAGTGGTACGTTGACGGAGCCTCTGTGGGATATTGCAGCGGTTCCTTATCCATATCCCAATAATGGAATTTTTGTTCGTGAGTATACGATCAAGCTTTTGAGTACTTCATTCCCGAACATGACTGGAACAGAGGTCACCCAATTTGTGAGTGGACTATTTGACTCGAGGACTGACCTATCCACATTTAAGAATCACATCCGAGACTTTTTAGTGCAATCCAAAGAATTTTCTGCACAGGACAACAAAGATCTTTATGCAGAGGAGGCTGCTGCACAGAGGGAGAAAGATCGGCAACGAATGCTTTCTATTCCAGGGCTCATTGCCCCCAATGAGATACAGGATGAAATGGTTGATTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000054 GO:0000055 GO:0000056 GO:0000122 GO:0000775 GO:0000776 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0006357 GO:0006403 GO:0006405 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0007275 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009553 GO:0009555 GO:0009628 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009889 GO:0009890 GO:0009892 GO:0009932 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019904 GO:0022414 GO:0022613 GO:0030054 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031503 GO:0032386 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032989 GO:0032991 GO:0033036 GO:0033157 GO:0033750 GO:0034613 GO:0040007 GO:0042221 GO:0042254 GO:0042493 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045184 GO:0045892 GO:0045934 GO:0046822 GO:0046825 GO:0046907 GO:0048229 GO:0048468 GO:0048519 GO:0048523 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051252 GO:0051253 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0055044 GO:0060255 GO:0060341 GO:0060560 GO:0065007 GO:0070201 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071705 GO:0071840 GO:0080090 GO:0090087 GO:0098687 GO:0140104 GO:0140142 GO:1902679 GO:1903506 GO:1903507 GO:1903827 GO:2000112 GO:2000113 GO:2001141
Pfam Domains
Protein Families

Protein Analysis

1078

Amino Acids

123.57

Weight (kDa)

5.52

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0009963)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2438
AatII GACGTC 2 cut(s) 45, 300
Acc36I ACCTGC 1 cut(s) 205
AccB1I GGYRCC 1 cut(s) 80
AccI GTMKAC 1 cut(s) 2957
AccII CGCG 2 cut(s) 1341, 1581
AccIII TCCGGA 1 cut(s) 142
AciI CCGC 7 cut(s) 5, 124, 402, 1231, 2621, 2684, 2912
AclI AACGTT 1 cut(s) 2126
AclWI GGATC 6 cut(s) 94, 435, 913, 2064, 2354, 2367
AcoI YGGCCR 2 cut(s) 6, 477
AcuI CTGAAG 5 cut(s) 560, 1083, 2573, 2648, 2738
AcyI GRCGYC 2 cut(s) 42, 297
AfaI GTAC 8 cut(s) 609, 1821, 2177, 2186, 2447, 2761, 2881, 2977
AfiI CCNNNNNNNGG 6 cut(s) 226, 408, 1509, 2369, 2707, 2936
AflIII ACRYGT 1 cut(s) 2808
AhdI GACNNNNNGTC 1 cut(s) 350
AhlI ACTAGT 1 cut(s) 449
AjnI CCWGG 5 cut(s) 1189, 2381, 2821, 2865, 3184
AjuI GAANNNNNNNTTGG 2 cut(s) 2690, 2722
AloI GAACNNNNNNTCC 2 cut(s) 2931, 2963
Alw21I GWGCWC 6 cut(s) 168, 636, 1687, 2196, 2504, 2850
Alw26I GTCTC 7 cut(s) 337, 624, 1337, 1385, 2270, 2288, 3069
Alw44I GTGCAC 2 cut(s) 164, 2500
AlwI GGATC 6 cut(s) 94, 435, 913, 2064, 2354, 2367
AlwNI CAGNNNCTG 2 cut(s) 1151, 1949
Ama87I CYCGRG 1 cut(s) 3037
Aor13HI TCCGGA 1 cut(s) 142
AoxI GGCC 8 cut(s) 6, 324, 398, 477, 1204, 1764, 1864, 2310
ApaLI GTGCAC 2 cut(s) 164, 2500
Asp700I GAANNNNTTC 4 cut(s) 720, 1302, 2558, 3175
AspLEI GCGC 2 cut(s) 182, 1123
AspS9I GGNCC 5 cut(s) 217, 399, 847, 1521, 2222
AsuC2I CCSGG 1 cut(s) 1749
AsuHPI GGTGA 7 cut(s) 751, 812, 1484, 1579, 1889, 2384, 3001
AsuII TTCGAA 1 cut(s) 334
AsuNHI GCTAGC 1 cut(s) 1637
AvaI CYCGRG 1 cut(s) 3037
AvaII GGWCC 4 cut(s) 217, 847, 1521, 2222
BaeGI GKGCMC 2 cut(s) 168, 2504
BalI TGGCCA 1 cut(s) 479
BamHI GGATCC 1 cut(s) 2359
BanI GGYRCC 1 cut(s) 80
BanII GRGCYC 4 cut(s) 636, 1687, 2196, 3192
BauI CACGAG 1 cut(s) 673
BbsI GAAGAC 1 cut(s) 2322
Bbv12I GWGCWC 6 cut(s) 168, 636, 1687, 2196, 2504, 2850
BccI CCATC 9 cut(s) 266, 402, 877, 1012, 1156, 1196, 1534, 1564, 1752
BceAI ACGGC 1 cut(s) 94
BciT130I CCWGG 5 cut(s) 1191, 2383, 2823, 2867, 3186
BcnI CCSGG 1 cut(s) 1749
BcoDI GTCTC 7 cut(s) 337, 624, 1337, 1385, 2270, 2288, 3069
BcuI ACTAGT 1 cut(s) 449
BfaI CTAG 9 cut(s) 221, 405, 450, 909, 1638, 2103, 2202, 2400, 3232
BfmI CTRYAG 4 cut(s) 108, 1143, 1169, 1976
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 1 cut(s) 205
BglII AGATCT 1 cut(s) 3121
BlpI GCTNAGC 1 cut(s) 1290
BmcAI AGTACT 1 cut(s) 2977
Bme1390I CCNGG 6 cut(s) 1191, 1749, 2383, 2823, 2867, 3186
Bme18I GGWCC 4 cut(s) 217, 847, 1521, 2222
BmeRI GACNNNNNGTC 1 cut(s) 350
BmeT110I CYCGRG 1 cut(s) 3037
BmgT120I GGNCC 5 cut(s) 217, 399, 847, 1521, 2222
BmiI GGNNCC 8 cut(s) 82, 1522, 1534, 2223, 2224, 2361, 2892, 2916
BmrFI CCNGG 6 cut(s) 1191, 1749, 2383, 2823, 2867, 3186
BmsI GCATC 7 cut(s) 46, 729, 1132, 1431, 2386, 2554, 2703
BmtI GCTAGC 1 cut(s) 1641
BpiI GAAGAC 1 cut(s) 2322
BplI GAGNNNNNCTC 4 cut(s) 618, 650, 2263, 2295
Bpu10I CCTNAGC 1 cut(s) 17
Bpu1102I GCTNAGC 1 cut(s) 1290
Bpu14I TTCGAA 1 cut(s) 334
BpuEI CTTGAG 7 cut(s) 46, 502, 873, 1910, 2036, 2056, 2267
BpuMI CCSGG 1 cut(s) 1749
BsaAI YACGTR 1 cut(s) 641
BsaBI GATNNNNATC 1 cut(s) 1971
BsaHI GRCGYC 2 cut(s) 42, 297
BsaI GGTCTC 1 cut(s) 1337
BsaJI CCNNGG 7 cut(s) 684, 1098, 1207, 1670, 2119, 2822, 3185
BsaWI WCCGGW 5 cut(s) 83, 142, 424, 750, 2362
BsaXI ACNNNNNCTCC 6 cut(s) 332, 362, 2402, 2432, 2882, 2912
Bsc4I CCNNNNNNNGG 6 cut(s) 226, 408, 1509, 2369, 2707, 2936
Bse1I ACTGG 4 cut(s) 850, 1245, 2497, 3001
Bse3DI GCAATG 5 cut(s) 656, 2208, 2463, 2679, 3192
Bse8I GATNNNNATC 1 cut(s) 1971
BseAI TCCGGA 1 cut(s) 142
BseBI CCWGG 5 cut(s) 1191, 2383, 2823, 2867, 3186
BseDI CCNNGG 7 cut(s) 684, 1098, 1207, 1670, 2119, 2822, 3185
BseGI GGATG 8 cut(s) 882, 1060, 1744, 1972, 2187, 2240, 3069, 3220
BseJI GATNNNNATC 1 cut(s) 1971
BseLI CCNNNNNNNGG 6 cut(s) 226, 408, 1509, 2369, 2707, 2936
BseMI GCAATG 5 cut(s) 656, 2208, 2463, 2679, 3192
BseMII CTCAG 4 cut(s) 548, 1422, 1480, 2126
BseNI ACTGG 4 cut(s) 850, 1245, 2497, 3001
BseRI GAGGAG 2 cut(s) 110, 3149
BseSI GKGCMC 2 cut(s) 168, 2504
BseX3I CGGCCG 1 cut(s) 6
BseYI CCCAGC 1 cut(s) 1509
BsgI GTGCAG 2 cut(s) 3090, 3129
Bsh1236I CGCG 2 cut(s) 1341, 1581
Bsh1285I CGRYCG 2 cut(s) 9, 2264
BshFI GGCC 8 cut(s) 8, 326, 400, 479, 1206, 1766, 1866, 2312
BshNI GGYRCC 1 cut(s) 80
BsiEI CGRYCG 2 cut(s) 9, 2264
BsiHKAI GWGCWC 6 cut(s) 168, 636, 1687, 2196, 2504, 2850
BsiHKCI CYCGRG 1 cut(s) 3037
BsiSI CCGG 6 cut(s) 84, 143, 425, 751, 1749, 2363
BslFI GGGAC 5 cut(s) 35, 140, 688, 2208, 2330
BslI CCNNNNNNNGG 6 cut(s) 226, 408, 1509, 2369, 2707, 2936
BsmAI GTCTC 7 cut(s) 337, 624, 1337, 1385, 2270, 2288, 3069
BsmBI CGTCTC 1 cut(s) 624
BsmFI GGGAC 5 cut(s) 35, 140, 688, 2208, 2330
BsmI GAATGC 3 cut(s) 253, 923, 3177
BsnI GGCC 8 cut(s) 8, 326, 400, 479, 1206, 1766, 1866, 2312
Bso31I GGTCTC 1 cut(s) 1337
BsoBI CYCGRG 1 cut(s) 3037
Bsp119I TTCGAA 1 cut(s) 334
Bsp1286I GDGCHC 7 cut(s) 168, 636, 1687, 2196, 2504, 2850, 3192
Bsp13I TCCGGA 1 cut(s) 142
Bsp1407I TGTACA 3 cut(s) 1819, 2175, 2184
Bsp1720I GCTNAGC 1 cut(s) 1290
Bsp68I TCGCGA 1 cut(s) 1341
BspACI CCGC 7 cut(s) 5, 124, 402, 1231, 2621, 2684, 2912
BspANI GGCC 8 cut(s) 8, 326, 400, 479, 1206, 1766, 1866, 2312
BspCNI CTCAG 4 cut(s) 547, 1423, 1479, 2127
BspEI TCCGGA 1 cut(s) 142
BspFNI CGCG 2 cut(s) 1341, 1581
BspHI TCATGA 3 cut(s) 589, 1272, 1383
BspLI GGNNCC 8 cut(s) 82, 1522, 1534, 2223, 2224, 2361, 2892, 2916
BspMAI CTGCAG 3 cut(s) 112, 1147, 1173
BspMI ACCTGC 1 cut(s) 205
BspOI GCTAGC 1 cut(s) 1641
BspPI GGATC 6 cut(s) 94, 435, 913, 2064, 2354, 2367
BspT104I TTCGAA 1 cut(s) 334
BspT107I GGYRCC 1 cut(s) 80
BspTNI GGTCTC 1 cut(s) 1337
BsrDI GCAATG 5 cut(s) 656, 2208, 2463, 2679, 3192
BsrGI TGTACA 3 cut(s) 1819, 2175, 2184
BsrI ACTGG 4 cut(s) 850, 1245, 2497, 3001
BssECI CCNNGG 7 cut(s) 684, 1098, 1207, 1670, 2119, 2822, 3185
BssNAI GTATAC 1 cut(s) 2958
BssNI GRCGYC 2 cut(s) 42, 297
BssSI CACGAG 1 cut(s) 673
BssT1I CCWWGG 5 cut(s) 684, 1098, 1207, 1670, 2119
Bst1107I GTATAC 1 cut(s) 2958
Bst2BI CACGAG 1 cut(s) 673
Bst2UI CCWGG 5 cut(s) 1191, 2383, 2823, 2867, 3186
Bst6I CTCTTC 2 cut(s) 495, 1293
BstACI GRCGYC 2 cut(s) 42, 297
BstAPI GCANNNNNTGC 4 cut(s) 1151, 1634, 2582, 3172
BstAUI TGTACA 3 cut(s) 1819, 2175, 2184
BstBAI YACGTR 1 cut(s) 641
BstBI TTCGAA 1 cut(s) 334
BstEII GGTNACC 1 cut(s) 3007
BstF5I GGATG 8 cut(s) 882, 1060, 1744, 1972, 2187, 2240, 3069, 3220
BstFNI CGCG 2 cut(s) 1341, 1581
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 2 cut(s) 182, 1123
BstMAI GTCTC 7 cut(s) 337, 624, 1337, 1385, 2270, 2288, 3069
BstMCI CGRYCG 2 cut(s) 9, 2264
BstNI CCWGG 5 cut(s) 1191, 2383, 2823, 2867, 3186
BstNSI RCATGY 3 cut(s) 665, 2167, 2840
BstPI GGTNACC 1 cut(s) 3007
BstSCI CCNGG 6 cut(s) 1189, 1747, 2381, 2821, 2865, 3184
BstSFI CTRYAG 4 cut(s) 108, 1143, 1169, 1976
BstSLI GKGCMC 2 cut(s) 168, 2504
BstUI CGCG 2 cut(s) 1341, 1581
BstV2I GAAGAC 1 cut(s) 2322
BstX2I RGATCY 5 cut(s) 86, 427, 905, 2359, 3121
BstYI RGATCY 5 cut(s) 86, 427, 905, 2359, 3121
BstZ17I GTATAC 1 cut(s) 2958
BstZI CGGCCG 1 cut(s) 6
BsuRI GGCC 8 cut(s) 8, 326, 400, 479, 1206, 1766, 1866, 2312
BtgZI GCGATG 2 cut(s) 927, 2531
BtsCI GGATG 8 cut(s) 882, 1060, 1744, 1972, 2187, 2240, 3069, 3220
BtsIMutI CAGTG 9 cut(s) 577, 773, 941, 1059, 1394, 1428, 1474, 2194, 2504
BtuMI TCGCGA 1 cut(s) 1341
BveI ACCTGC 1 cut(s) 205
CaiI CAGNNNCTG 2 cut(s) 1151, 1949
CciI TCATGA 3 cut(s) 589, 1272, 1383
CfoI GCGC 2 cut(s) 182, 1123
Cfr13I GGNCC 5 cut(s) 217, 399, 847, 1521, 2222
CseI GACGC 1 cut(s) 606
Csp6I GTAC 8 cut(s) 608, 1820, 2176, 2185, 2446, 2760, 2880, 2976
CviQI GTAC 8 cut(s) 608, 1820, 2176, 2185, 2446, 2760, 2880, 2976
DriI GACNNNNNGTC 1 cut(s) 350
EaeI YGGCCR 2 cut(s) 6, 477
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 2 cut(s) 495, 1293
Eam1105I GACNNNNNGTC 1 cut(s) 350
EarI CTCTTC 2 cut(s) 495, 1293
Ecl136II GAGCTC 3 cut(s) 634, 1685, 2194
EclXI CGGCCG 1 cut(s) 6
Eco130I CCWWGG 5 cut(s) 684, 1098, 1207, 1670, 2119
Eco147I AGGCCT 2 cut(s) 326, 1866
Eco24I GRGCYC 4 cut(s) 636, 1687, 2196, 3192
Eco31I GGTCTC 1 cut(s) 1337
Eco47I GGWCC 4 cut(s) 217, 847, 1521, 2222
Eco52I CGGCCG 1 cut(s) 6
Eco53kI GAGCTC 3 cut(s) 634, 1685, 2194
Eco57I CTGAAG 5 cut(s) 560, 1083, 2573, 2648, 2738
Eco88I CYCGRG 1 cut(s) 3037
Eco91I GGTNACC 1 cut(s) 3007
EcoICRI GAGCTC 3 cut(s) 634, 1685, 2194
EcoO109I RGGNCCY 2 cut(s) 217, 2222
EcoO65I GGTNACC 1 cut(s) 3007
EcoRI GAATTC 2 cut(s) 803, 1093
EcoRII CCWGG 5 cut(s) 1189, 2381, 2821, 2865, 3184
EcoT14I CCWWGG 5 cut(s) 684, 1098, 1207, 1670, 2119
EcoT22I ATGCAT 2 cut(s) 253, 1737
EcoT38I GRGCYC 4 cut(s) 636, 1687, 2196, 3192
ErhI CCWWGG 5 cut(s) 684, 1098, 1207, 1670, 2119
Esp3I CGTCTC 1 cut(s) 624
FalI AAGNNNNNCTT 2 cut(s) 1064, 1096
FaqI GGGAC 5 cut(s) 35, 140, 688, 2208, 2330
FauI CCCGC 2 cut(s) 117, 409
FauNDI CATATG 1 cut(s) 1048
FblI GTMKAC 1 cut(s) 2957
FokI GGATG 8 cut(s) 869, 1067, 1731, 1979, 2194, 2227, 3056, 3227
FriOI GRGCYC 4 cut(s) 636, 1687, 2196, 3192
FspBI CTAG 9 cut(s) 221, 405, 450, 909, 1638, 2103, 2202, 2400, 3232
GlaI GCGC 2 cut(s) 181, 1122
GsaI CCCAGC 1 cut(s) 1513
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 8 cut(s) 8, 326, 400, 479, 1206, 1766, 1866, 2312
HapII CCGG 6 cut(s) 84, 143, 425, 751, 1749, 2363
HgaI GACGC 1 cut(s) 606
HhaI GCGC 2 cut(s) 182, 1123
Hin1I GRCGYC 2 cut(s) 42, 297
Hin6I GCGC 2 cut(s) 180, 1121
HinP1I GCGC 2 cut(s) 180, 1121
HincII GTYRAC 2 cut(s) 355, 2886
HindII GTYRAC 2 cut(s) 355, 2886
HindIII AAGCTT 5 cut(s) 14, 415, 891, 2630, 2966
HpaII CCGG 6 cut(s) 84, 143, 425, 751, 1749, 2363
HphI GGTGA 7 cut(s) 751, 812, 1484, 1579, 1889, 2384, 3001
Hpy166II GTNNAC 7 cut(s) 166, 355, 2176, 2502, 2886, 2958, 3026
Hpy8I GTNNAC 7 cut(s) 166, 355, 2176, 2502, 2886, 2958, 3026
Hpy99I CGWCG 2 cut(s) 47, 68
HpyAV CCTTC 7 cut(s) 82, 218, 731, 753, 1345, 2210, 2236
HpyCH4IV ACGT 6 cut(s) 42, 297, 640, 2126, 2810, 2882
HpySE526I ACGT 6 cut(s) 42, 297, 640, 2126, 2810, 2882
Hsp92I GRCGYC 2 cut(s) 42, 297
HspAI GCGC 2 cut(s) 180, 1121
KflI GGGWCCC 1 cut(s) 2222
Kpn2I TCCGGA 1 cut(s) 142
LmnI GCTCC 3 cut(s) 2120, 2853, 2890
LweI GCATC 7 cut(s) 46, 729, 1132, 1431, 2386, 2554, 2703
MaeI CTAG 9 cut(s) 221, 405, 450, 909, 1638, 2103, 2202, 2400, 3232
MaeII ACGT 6 cut(s) 42, 297, 640, 2126, 2810, 2882
MaeIII GTNAC 7 cut(s) 852, 966, 1407, 1769, 2372, 2418, 3007
MboII GAAGA 9 cut(s) 512, 553, 1310, 1328, 1556, 2327, 2543, 2551, 2731
MfeI CAATTG 1 cut(s) 2577
MflI RGATCY 5 cut(s) 86, 427, 905, 2359, 3121
MhlI GDGCHC 7 cut(s) 168, 636, 1687, 2196, 2504, 2850, 3192
MlsI TGGCCA 1 cut(s) 479
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 6 cut(s) 526, 710, 2146, 2272, 2414, 3029
MmeI TCCRAC 6 cut(s) 1639, 2337, 2388, 2688, 2715, 2875
Mox20I TGGCCA 1 cut(s) 479
Mph1103I ATGCAT 2 cut(s) 253, 1737
MroI TCCGGA 1 cut(s) 142
MroXI GAANNNNTTC 4 cut(s) 720, 1302, 2558, 3175
MscI TGGCCA 1 cut(s) 479
MslI CAYNNNNRTG 1 cut(s) 975
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 3 cut(s) 107, 538, 2912
MspI CCGG 6 cut(s) 84, 143, 425, 751, 1749, 2363
MspR9I CCNGG 6 cut(s) 1191, 1749, 2383, 2823, 2867, 3186
MunI CAATTG 1 cut(s) 2577
Mva1269I GAATGC 3 cut(s) 253, 923, 3177
MvaI CCWGG 5 cut(s) 1191, 2383, 2823, 2867, 3186
MvnI CGCG 2 cut(s) 1341, 1581
NciI CCSGG 1 cut(s) 1749
NdeI CATATG 1 cut(s) 1048
NheI GCTAGC 1 cut(s) 1637
NlaIV GGNNCC 8 cut(s) 82, 1522, 1534, 2223, 2224, 2361, 2892, 2916
NmeAIII GCCGAG 2 cut(s) 34, 655
NmuCI GTSAC 6 cut(s) 966, 1407, 1769, 2372, 2418, 3007
NruI TCGCGA 1 cut(s) 1341
NsiI ATGCAT 2 cut(s) 253, 1737
NspI RCATGY 3 cut(s) 665, 2167, 2840
NspV TTCGAA 1 cut(s) 334
PaeI GCATGC 1 cut(s) 665
PaeR7I CTCGAG 1 cut(s) 3037
PagI TCATGA 3 cut(s) 589, 1272, 1383
PceI AGGCCT 2 cut(s) 326, 1866
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 60
PctI GAATGC 3 cut(s) 253, 923, 3177
PdmI GAANNNNTTC 4 cut(s) 720, 1302, 2558, 3175
PfoI TCCNGGA 1 cut(s) 1747
PleI GAGTC 6 cut(s) 526, 709, 2145, 2272, 2413, 3029
PpsI GAGTC 6 cut(s) 526, 709, 2145, 2272, 2413, 3029
Ppu21I YACGTR 1 cut(s) 641
PpuMI RGGWCCY 2 cut(s) 217, 2222
PsiI TTATAA 1 cut(s) 2438
Psp124BI GAGCTC 3 cut(s) 636, 1687, 2196
Psp1406I AACGTT 1 cut(s) 2126
Psp5II RGGWCCY 2 cut(s) 217, 2222
Psp6I CCWGG 5 cut(s) 1189, 2381, 2821, 2865, 3184
PspEI GGTNACC 1 cut(s) 3007
PspFI CCCAGC 1 cut(s) 1509
PspGI CCWGG 5 cut(s) 1189, 2381, 2821, 2865, 3184
PspN4I GGNNCC 8 cut(s) 82, 1522, 1534, 2223, 2224, 2361, 2892, 2916
PspPI GGNCC 5 cut(s) 217, 399, 847, 1521, 2222
PspPPI RGGWCCY 2 cut(s) 217, 2222
PspXI VCTCGAGB 1 cut(s) 3037
PstI CTGCAG 3 cut(s) 112, 1147, 1173
PstNI CAGNNNCTG 2 cut(s) 1151, 1949
PsuI RGATCY 5 cut(s) 86, 427, 905, 2359, 3121
PvuII CAGCTG 2 cut(s) 107, 538
RruI TCGCGA 1 cut(s) 1341
RsaI GTAC 8 cut(s) 609, 1821, 2177, 2186, 2447, 2761, 2881, 2977
RsaNI GTAC 8 cut(s) 608, 1820, 2176, 2185, 2446, 2760, 2880, 2976
RseI CAYNNNNRTG 1 cut(s) 975
SacI GAGCTC 3 cut(s) 636, 1687, 2196
Sau96I GGNCC 5 cut(s) 217, 399, 847, 1521, 2222
ScaI AGTACT 1 cut(s) 2977
SchI GAGTC 6 cut(s) 526, 710, 2146, 2272, 2414, 3029
ScrFI CCNGG 6 cut(s) 1191, 1749, 2383, 2823, 2867, 3186
SduI GDGCHC 7 cut(s) 168, 636, 1687, 2196, 2504, 2850, 3192
SfaNI GCATC 7 cut(s) 46, 729, 1132, 1431, 2386, 2554, 2703
SfcI CTRYAG 4 cut(s) 108, 1143, 1169, 1976
Sfr274I CTCGAG 1 cut(s) 3037
SfuI TTCGAA 1 cut(s) 334
SinI GGWCC 4 cut(s) 217, 847, 1521, 2222
SlaI CTCGAG 1 cut(s) 3037
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 8 cut(s) 25, 517, 888, 1889, 2035, 2051, 2282, 3037
SmoI CTYRAG 8 cut(s) 25, 517, 888, 1889, 2035, 2051, 2282, 3037
SpeI ACTAGT 1 cut(s) 449
SphI GCATGC 1 cut(s) 665
SseBI AGGCCT 2 cut(s) 326, 1866
SsiI CCGC 7 cut(s) 5, 124, 402, 1231, 2621, 2684, 2912
SspI AATATT 2 cut(s) 367, 2481
SspMI CTAG 9 cut(s) 221, 405, 450, 909, 1638, 2103, 2202, 2400, 3232
SstI GAGCTC 3 cut(s) 636, 1687, 2196
StuI AGGCCT 2 cut(s) 326, 1866
StyD4I CCNGG 6 cut(s) 1189, 1747, 2381, 2821, 2865, 3184
StyI CCWWGG 5 cut(s) 684, 1098, 1207, 1670, 2119
TaiI ACGT 6 cut(s) 45, 300, 643, 2129, 2813, 2885
TaqI TCGA 6 cut(s) 54, 334, 1282, 2476, 2778, 3038
TatI WGTACW 6 cut(s) 607, 1819, 2175, 2184, 2445, 2975
TauI GCSGC 2 cut(s) 8, 1234
TscAI CASTG 9 cut(s) 577, 773, 948, 1066, 1401, 1435, 1474, 2194, 2504
TseFI GTSAC 6 cut(s) 966, 1407, 1769, 2372, 2418, 3007
Tsp45I GTSAC 6 cut(s) 966, 1407, 1769, 2372, 2418, 3007
TspGWI ACGGA 3 cut(s) 791, 2819, 2903
TspRI CASTG 9 cut(s) 577, 773, 948, 1066, 1401, 1435, 1474, 2194, 2504
VneI GTGCAC 2 cut(s) 164, 2500
VpaK11BI GGWCC 4 cut(s) 217, 847, 1521, 2222
XceI RCATGY 3 cut(s) 665, 2167, 2840
XcmI CCANNNNNNNNNTGG 2 cut(s) 2004, 3020
XhoI CTCGAG 1 cut(s) 3037
XmiI GTMKAC 1 cut(s) 2957
XmnI GAANNNNTTC 4 cut(s) 720, 1302, 2558, 3175
XspI CTAG 9 cut(s) 221, 405, 450, 909, 1638, 2103, 2202, 2400, 3232
ZraI GACGTC 2 cut(s) 43, 298
ZrmI AGTACT 1 cut(s) 2977
Zsp2I ATGCAT 2 cut(s) 253, 1737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.