Rorug01G0443900

Chromosome region maintenance protein 1 exportin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0001878
Physical Location & Seq
Forward (+)
54049302 .. 54055139
5838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0443900.1

Sequence Viewer

Length: 1623 bp
ATGATGACGGTGACCAACAGCGGCATCCAATACGCCGTTCAGATCATCACCAAACACTTCGGCAACCTCGTCGCTAAAGTTTGCGAAACCCTTCTGAAATCCGGACCGTTAAACCTGGGCGCTCTGATCCGATCGACGGCGCTCACTCCCCAGCAAGTCAAGAACTCTCTCCTGATTCTGGTCCAGCACAATTGCGTCCAGCCCTTTACCCAAGAGTCCAAGGCTGGGCTTAAAGTTCAGTACATTGCGGTGTACGATAACATACTCCATCGACTTAGGTTTGCGAAATTTCTGGCGGTTGTGGCCCAGGAGCTTGATGATGATTGCAAACAACTTCTTGCTGGTTTACTTGAGCATGGTAGACTTACACAGCAACAATTAATGGACAGAGCCAATCAGAAATCCAAATCAAATAGCAGTCAAGTTCAGAATGCTGCTCAAGATAACTTTGTTAGACTTGTGACTGCTCGTTTTGTTGAACGCTGCCCGGCCCCTGAACCACTTCTTGAAGAAGCACCTGAACAAGAAGGTCCGAAGAAGCCACGCTCTAAATCTGCTAAGATGGCACAAGTATCAGAGACCATAGAACAACGTGTTCTAGCAGCAGCAAGGCCTATGGAAGCAATAAGATTTTTAATTACGACAGATCCAGAAACTGATGATCCATCGCAAAAAAGTGAGAATAATTCCTCTAGTATGAGTGTTGGGGAGAAGCGCAAGTTTGATGATTTGGATATTGGTGAAGAACATGGGTCCAATGATAAGGAAGTGGTTCTTTGGCGTGCTAATTTTGAGCAGTTCATTCGTTGTCTAAGGCATAAGGCTTGTGTTGAGAATGTTAGAGCACGACATGATGATCGAGCTGCAGTTGTGTTAAGAGCTGTGCTGAAGGCAACTAGAATGCAGGAGACCAAAGTGAAAACAGATTATTCAGTTCCTTTAAAGATGGATGCCATTTATACTGAGGTAATAGATAGTGCAGCCGGCCGTAGTTTGACCAAGGGTTCTGTCAAAGCTTCCCTCCGCTTGTTGTGCGGTGCACCTCCTGTAAGAGGAGGATATGAGGGTGAGGGTGAGGGTGAGGGGGAGGATGAGGATGTGCCATATAGCGTTGACTTGAAGAAAATTATAGAACTGCTTCAGAATGATGAGGCGGAGTCGATTGTGATGAAAAGATATGGAAATGATGCTTATAGAATATTTAGGTTACTGACAGGCCAGTCAAACGCTGGTCGGTTTTTTGAGACAGATAAGATATCAGTAGATGCCCTTGTTGACAAAAAGGAAACACCTAAGATTCTCTATAAGCTCTGGAAGGATGACTACGTTCATATGGAGAAATTATCATTGACAACAGCTAAACAGTCACAAGTCATGGTGTGGAAAGTGCACAAGTCCATTGTTTGGGAACATGTTTCAGATGAGATGTACCATGCGGCGTACAATTTGGTTAAGCGATATGATCATGAGAGGGAAGAGAATAAGGAGGTTACAAATACCCCGAAGGAGAAACGCGTCGGTGAATTAGAGAAAAAAGCCAACCGGTTTCTAGGTGTCAGGAAAATCATGGCATTATCCCTCGTGAAGCTTGATGATGCTCTCATGCTCTTCCATGACTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000054 GO:0000055 GO:0000056 GO:0000122 GO:0000775 GO:0000776 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005049 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0006357 GO:0006403 GO:0006405 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0006950 GO:0007275 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009553 GO:0009555 GO:0009628 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009889 GO:0009890 GO:0009892 GO:0009932 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0016049 GO:0019219 GO:0019222 GO:0019904 GO:0022414 GO:0022613 GO:0030054 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031503 GO:0032386 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032989 GO:0032991 GO:0033036 GO:0033157 GO:0033750 GO:0034613 GO:0040007 GO:0042221 GO:0042254 GO:0042493 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0045184 GO:0045892 GO:0045934 GO:0046822 GO:0046825 GO:0046907 GO:0048229 GO:0048468 GO:0048519 GO:0048523 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051168 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051252 GO:0051253 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0055044 GO:0060255 GO:0060341 GO:0060560 GO:0065007 GO:0070201 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071705 GO:0071840 GO:0080090 GO:0090087 GO:0098687 GO:0140104 GO:0140142 GO:1902679 GO:1903506 GO:1903507 GO:1903827 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03008 ko03013 ko04013 ko05164 ko05166 ko05169 map03008 map03013 map04013 map05164 map05166 map05169
Pfam Domains
Protein Families
CRM1_C IBN_N Xpo1

Protein Analysis

540

Amino Acids

61.11

Weight (kDa)

8.0

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HTH_9 PF08221 11 - 67 2.5e-18 RNA polymerase III subunit RPC82 helix-turn-helix domain
RNA_pol_Rpc82 PF05645 148 - 323 2.7e-18 RNA polymerase III subunit RPC82
WHD_POLR3C PF22536 386 - 453 2.4e-10 POLR3C, C-terminal winged-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1219
AccB7I CCANNNNNTGG 1 cut(s) 1404
AccI GTMKAC 1 cut(s) 361
AccII CGCG 1 cut(s) 1515
AccIII TCCGGA 1 cut(s) 101
AciI CCGC 7 cut(s) 21, 248, 296, 1024, 1035, 1154, 1436
AclWI GGATC 3 cut(s) 121, 641, 656
AcoI YGGCCR 1 cut(s) 985
AcsI RAATTY 1 cut(s) 287
AcuI CTGAAG 2 cut(s) 908, 1124
AfaI GTAC 4 cut(s) 242, 254, 1430, 1442
AfiI CCNNNNNNNGG 5 cut(s) 136, 178, 225, 1052, 1404
AflIII ACRYGT 3 cut(s) 592, 1411, 1513
AgeI ACCGGT 1 cut(s) 1542
AgsI TTSAA 3 cut(s) 479, 509, 1120
AjnI CCWGG 2 cut(s) 114, 306
AjuI GAANNNNNNNTTGG 2 cut(s) 21, 53
AluBI AGCT 7 cut(s) 313, 863, 881, 1016, 1309, 1358, 1588
AluI AGCT 7 cut(s) 313, 863, 881, 1016, 1309, 1358, 1588
Alw21I GWGCWC 3 cut(s) 847, 1042, 1392
Alw26I GTCTC 3 cut(s) 572, 902, 1238
Alw44I GTGCAC 2 cut(s) 1038, 1388
AlwI GGATC 3 cut(s) 121, 641, 656
AlwNI CAGNNNCTG 1 cut(s) 656
Aor13HI TCCGGA 1 cut(s) 101
AoxI GGCC 5 cut(s) 303, 489, 611, 985, 1216
ApaLI GTGCAC 2 cut(s) 1038, 1388
ApeKI GCWGC 6 cut(s) 434, 483, 602, 605, 863, 980
ApoI RAATTY 1 cut(s) 287
AseI ATTAAT 1 cut(s) 380
AsiGI ACCGGT 1 cut(s) 1542
Asp700I GAANNNNTTC 4 cut(s) 90, 501, 771, 1137
AspLEI GCGC 3 cut(s) 122, 142, 717
AspS9I GGNCC 6 cut(s) 104, 181, 304, 490, 530, 753
AsuC2I CCSGG 1 cut(s) 488
AsuHPI GGTGA 7 cut(s) 22, 40, 752, 1079, 1085, 1091, 1532
AvaII GGWCC 4 cut(s) 104, 181, 530, 753
BaeGI GKGCMC 2 cut(s) 1042, 1392
BarI GAAGNNNNNNTAC 2 cut(s) 1307, 1339
BauI CACGAG 1 cut(s) 1580
Bbv12I GWGCWC 3 cut(s) 847, 1042, 1392
BbvI GCAGC 6 cut(s) 421, 470, 614, 617, 850, 992
BccI CCATC 4 cut(s) 276, 556, 673, 940
BceAI ACGGC 3 cut(s) 20, 153, 972
BcgI CGANNNNNNTGC 4 cut(s) 52, 86, 785, 819
BciT130I CCWGG 2 cut(s) 116, 308
BclI TGATCA 1 cut(s) 1462
BcnI CCSGG 1 cut(s) 488
BcoDI GTCTC 3 cut(s) 572, 902, 1238
BfaI CTAG 4 cut(s) 599, 693, 897, 1550
BfmI CTRYAG 1 cut(s) 864
BfoI RGCGCY 2 cut(s) 123, 143
BisI GCNGC 8 cut(s) 22, 435, 484, 603, 606, 864, 981, 1437
BlsI GCNGC 8 cut(s) 23, 436, 485, 604, 607, 865, 982, 1438
Bme1390I CCNGG 3 cut(s) 116, 308, 488
Bme18I GGWCC 4 cut(s) 104, 181, 530, 753
BmgT120I GGNCC 6 cut(s) 104, 181, 304, 490, 530, 753
BmiI GGNNCC 2 cut(s) 492, 754
BmrFI CCNGG 3 cut(s) 116, 308, 488
BmsI GCATC 5 cut(s) 33, 940, 1177, 1255, 1585
BpuEI CTTGAG 2 cut(s) 371, 423
BpuMI CCSGG 1 cut(s) 488
BsaI GGTCTC 2 cut(s) 572, 902
BsaJI CCNNGG 4 cut(s) 115, 219, 306, 999
BsaWI WCCGGW 2 cut(s) 101, 1542
Bsc4I CCNNNNNNNGG 5 cut(s) 136, 178, 225, 1052, 1404
Bse118I RCCGGY 2 cut(s) 983, 1542
Bse1I ACTGG 1 cut(s) 1219
Bse3DI GCAATG 1 cut(s) 243
BseAI TCCGGA 1 cut(s) 101
BseBI CCWGG 2 cut(s) 116, 308
BseDI CCNNGG 4 cut(s) 115, 219, 306, 999
BseGI GGATG 5 cut(s) 24, 955, 1096, 1102, 1324
BseLI CCNNNNNNNGG 5 cut(s) 136, 178, 225, 1052, 1404
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 1 cut(s) 954
BseNI ACTGG 1 cut(s) 1219
BseRI GAGGAG 1 cut(s) 1068
BseSI GKGCMC 2 cut(s) 1042, 1392
BseX3I CGGCCG 1 cut(s) 985
BseXI GCAGC 6 cut(s) 421, 470, 614, 617, 850, 992
BseYI CCCAGC 2 cut(s) 150, 224
BsgI GTGCAG 1 cut(s) 999
Bsh1236I CGCG 1 cut(s) 1515
Bsh1285I CGRYCG 2 cut(s) 134, 988
BshFI GGCC 5 cut(s) 305, 491, 613, 987, 1218
BshTI ACCGGT 1 cut(s) 1542
BsiEI CGRYCG 2 cut(s) 134, 988
BsiHKAI GWGCWC 3 cut(s) 847, 1042, 1392
BsiSI CCGG 4 cut(s) 102, 488, 984, 1543
BslI CCNNNNNNNGG 5 cut(s) 136, 178, 225, 1052, 1404
BsmAI GTCTC 3 cut(s) 572, 902, 1238
BsmI GAATGC 2 cut(s) 436, 906
BsnI GGCC 5 cut(s) 305, 491, 613, 987, 1218
Bso31I GGTCTC 2 cut(s) 572, 902
Bsp1286I GDGCHC 3 cut(s) 847, 1042, 1392
Bsp13I TCCGGA 1 cut(s) 101
Bsp143I GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
BspACI CCGC 7 cut(s) 21, 248, 296, 1024, 1035, 1154, 1436
BspANI GGCC 5 cut(s) 305, 491, 613, 987, 1218
BspCNI CTCAG 1 cut(s) 955
BspEI TCCGGA 1 cut(s) 101
BspFNI CGCG 1 cut(s) 1515
BspHI TCATGA 1 cut(s) 1465
BspLI GGNNCC 2 cut(s) 492, 754
BspMAI CTGCAG 1 cut(s) 868
BspPI GGATC 3 cut(s) 121, 641, 656
BspQI GCTCTTC 1 cut(s) 1613
BspTNI GGTCTC 2 cut(s) 572, 902
BsrDI GCAATG 1 cut(s) 243
BsrFI RCCGGY 2 cut(s) 983, 1542
BsrI ACTGG 1 cut(s) 1219
BssAI RCCGGY 2 cut(s) 983, 1542
BssECI CCNNGG 4 cut(s) 115, 219, 306, 999
BssMI GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
BssSI CACGAG 1 cut(s) 1580
BssT1I CCWWGG 2 cut(s) 219, 999
Bst2BI CACGAG 1 cut(s) 1580
Bst2UI CCWGG 2 cut(s) 116, 308
Bst4CI ACNGT 3 cut(s) 10, 108, 1365
Bst6I CTCTTC 2 cut(s) 1470, 1613
BstC8I GCNNGC 2 cut(s) 783, 985
BstDEI CTNAG 5 cut(s) 275, 558, 812, 963, 1293
BstEII GGTNACC 1 cut(s) 10
BstENI CCTNNNNNAGG 1 cut(s) 1050
BstF5I GGATG 5 cut(s) 24, 955, 1096, 1102, 1324
BstFNI CGCG 1 cut(s) 1515
BstH2I RGCGCY 2 cut(s) 123, 143
BstHHI GCGC 3 cut(s) 122, 142, 717
BstKTI GATC 7 cut(s) 45, 129, 134, 649, 664, 859, 1465
BstMAI GTCTC 3 cut(s) 572, 902, 1238
BstMBI GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
BstMCI CGRYCG 2 cut(s) 134, 988
BstMWI GCNNNNNNNGC 3 cut(s) 302, 563, 1032
BstNI CCWGG 2 cut(s) 116, 308
BstNSI RCATGY 1 cut(s) 1415
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 3 cut(s) 114, 306, 486
BstSFI CTRYAG 1 cut(s) 864
BstSLI GKGCMC 2 cut(s) 1042, 1392
BstUI CGCG 1 cut(s) 1515
BstV1I GCAGC 6 cut(s) 421, 470, 614, 617, 850, 992
BstX2I RGATCY 1 cut(s) 646
BstYI RGATCY 1 cut(s) 646
BstZI CGGCCG 1 cut(s) 985
BsuRI GGCC 5 cut(s) 305, 491, 613, 987, 1218
BtgZI GCGATG 1 cut(s) 651
BtsCI GGATG 5 cut(s) 24, 955, 1096, 1102, 1324
Cac8I GCNNGC 2 cut(s) 783, 985
CaiI CAGNNNCTG 1 cut(s) 656
CciI TCATGA 1 cut(s) 1465
CfoI GCGC 3 cut(s) 122, 142, 717
Cfr10I RCCGGY 2 cut(s) 983, 1542
Cfr13I GGNCC 6 cut(s) 104, 181, 304, 490, 530, 753
CpoI CGGWCCG 1 cut(s) 104
CseI GACGC 2 cut(s) 184, 1504
Csp6I GTAC 4 cut(s) 241, 253, 1429, 1441
CspAI ACCGGT 1 cut(s) 1542
CspI CGGWCCG 1 cut(s) 104
CviQI GTAC 4 cut(s) 241, 253, 1429, 1441
DdeI CTNAG 5 cut(s) 275, 558, 812, 963, 1293
DpnI GATC 7 cut(s) 44, 128, 133, 648, 663, 858, 1464
DpnII GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
DraI TTTAAA 1 cut(s) 942
DrdI GACNNNNNNGTC 1 cut(s) 1219
DseDI GACNNNNNNGTC 1 cut(s) 1219
EaeI YGGCCR 1 cut(s) 985
EagI CGGCCG 1 cut(s) 985
Eam1104I CTCTTC 2 cut(s) 1470, 1613
EarI CTCTTC 2 cut(s) 1470, 1613
EciI GGCGGA 1 cut(s) 1169
EclXI CGGCCG 1 cut(s) 985
Eco130I CCWWGG 2 cut(s) 219, 999
Eco147I AGGCCT 1 cut(s) 613
Eco31I GGTCTC 2 cut(s) 572, 902
Eco32I GATATC 1 cut(s) 1257
Eco47I GGWCC 4 cut(s) 104, 181, 530, 753
Eco52I CGGCCG 1 cut(s) 985
Eco57I CTGAAG 2 cut(s) 908, 1124
Eco91I GGTNACC 1 cut(s) 10
EcoNI CCTNNNNNAGG 1 cut(s) 1050
EcoO65I GGTNACC 1 cut(s) 10
EcoRII CCWGG 2 cut(s) 114, 306
EcoRV GATATC 1 cut(s) 1257
EcoT14I CCWWGG 2 cut(s) 219, 999
ErhI CCWWGG 2 cut(s) 219, 999
FalI AAGNNNNNCTT 2 cut(s) 759, 791
FauNDI CATATG 1 cut(s) 1332
FbaI TGATCA 1 cut(s) 1462
FblI GTMKAC 1 cut(s) 361
Fnu4HI GCNGC 8 cut(s) 22, 435, 484, 603, 606, 864, 981, 1437
FokI GGATG 5 cut(s) 11, 962, 1103, 1109, 1331
Fsp4HI GCNGC 8 cut(s) 22, 435, 484, 603, 606, 864, 981, 1437
FspBI CTAG 4 cut(s) 599, 693, 897, 1550
GlaI GCGC 3 cut(s) 121, 141, 716
GluI GCNGC 8 cut(s) 22, 435, 484, 603, 606, 864, 981, 1437
GsaI CCCAGC 2 cut(s) 154, 228
HaeII RGCGCY 2 cut(s) 123, 143
HaeIII GGCC 5 cut(s) 305, 491, 613, 987, 1218
HapII CCGG 4 cut(s) 102, 488, 984, 1543
HgaI GACGC 2 cut(s) 184, 1504
HhaI GCGC 3 cut(s) 122, 142, 717
Hin6I GCGC 3 cut(s) 120, 140, 715
HinP1I GCGC 3 cut(s) 120, 140, 715
HincII GTYRAC 2 cut(s) 1114, 1276
HindII GTYRAC 2 cut(s) 1114, 1276
HindIII AAGCTT 2 cut(s) 1014, 1586
HinfI GANTC 4 cut(s) 175, 215, 1157, 1297
HpaII CCGG 4 cut(s) 102, 488, 984, 1543
HphI GGTGA 7 cut(s) 22, 40, 752, 1079, 1085, 1091, 1532
Hpy166II GTNNAC 7 cut(s) 253, 347, 362, 1040, 1114, 1276, 1390
Hpy8I GTNNAC 7 cut(s) 253, 347, 362, 1040, 1114, 1276, 1390
Hpy99I CGWCG 3 cut(s) 74, 139, 1520
HpyAV CCTTC 5 cut(s) 101, 521, 883, 1309, 1498
HpyCH4III ACNGT 3 cut(s) 10, 108, 1365
HpyCH4IV ACGT 2 cut(s) 592, 1326
HpyCH4V TGCA 6 cut(s) 327, 866, 904, 980, 1040, 1390
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 563, 1032
HpyF3I CTNAG 5 cut(s) 275, 558, 812, 963, 1293
HpySE526I ACGT 2 cut(s) 592, 1326
HspAI GCGC 3 cut(s) 120, 140, 715
Kpn2I TCCGGA 1 cut(s) 101
KroI GCCGGC 1 cut(s) 983
KroNI GCCGGC 1 cut(s) 985
Ksp22I TGATCA 1 cut(s) 1462
Kzo9I GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
LguI GCTCTTC 1 cut(s) 1613
LmnI GCTCC 1 cut(s) 310
Lsp1109I GCAGC 6 cut(s) 421, 470, 614, 617, 850, 992
LweI GCATC 5 cut(s) 33, 940, 1177, 1255, 1585
MaeI CTAG 4 cut(s) 599, 693, 897, 1550
MaeII ACGT 2 cut(s) 592, 1326
MaeIII GTNAC 5 cut(s) 10, 460, 1206, 1365, 1489
MalI GATC 7 cut(s) 44, 128, 133, 648, 663, 858, 1464
MboI GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
MboII GAAGA 6 cut(s) 521, 547, 755, 1132, 1487, 1600
MfeI CAATTG 1 cut(s) 190
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 3 cut(s) 847, 1042, 1392
MluI ACGCGT 1 cut(s) 1513
MlyI GAGTC 2 cut(s) 224, 1166
MroI TCCGGA 1 cut(s) 101
MroNI GCCGGC 1 cut(s) 983
MroXI GAANNNNTTC 4 cut(s) 90, 501, 771, 1137
MseI TTAA 7 cut(s) 110, 231, 380, 635, 875, 941, 1452
MslI CAYNNNNRTG 1 cut(s) 248
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 4 cut(s) 102, 488, 984, 1543
MspR9I CCNGG 3 cut(s) 116, 308, 488
MunI CAATTG 1 cut(s) 190
Mva1269I GAATGC 2 cut(s) 436, 906
MvaI CCWGG 2 cut(s) 116, 308
MvnI CGCG 1 cut(s) 1515
MwoI GCNNNNNNNGC 3 cut(s) 302, 563, 1032
NaeI GCCGGC 1 cut(s) 985
NciI CCSGG 1 cut(s) 488
NdeI CATATG 1 cut(s) 1332
NdeII GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
NgoMIV GCCGGC 1 cut(s) 983
NlaIV GGNNCC 2 cut(s) 492, 754
NmuCI GTSAC 3 cut(s) 10, 460, 1365
NspI RCATGY 1 cut(s) 1415
PagI TCATGA 1 cut(s) 1465
PceI AGGCCT 1 cut(s) 613
PciI ACATGT 1 cut(s) 1411
PciSI GCTCTTC 1 cut(s) 1613
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PctI GAATGC 2 cut(s) 436, 906
PdiI GCCGGC 1 cut(s) 985
PdmI GAANNNNTTC 4 cut(s) 90, 501, 771, 1137
PfeI GAWTC 2 cut(s) 175, 1297
PflMI CCANNNNNTGG 1 cut(s) 1404
PinAI ACCGGT 1 cut(s) 1542
PkrI GCNGC 8 cut(s) 23, 436, 485, 604, 607, 865, 982, 1438
Ple19I CGATCG 1 cut(s) 134
PleI GAGTC 2 cut(s) 223, 1165
PpsI GAGTC 2 cut(s) 223, 1165
PscI ACATGT 1 cut(s) 1411
PshBI ATTAAT 1 cut(s) 380
Psp6I CCWGG 2 cut(s) 114, 306
PspEI GGTNACC 1 cut(s) 10
PspFI CCCAGC 2 cut(s) 150, 224
PspGI CCWGG 2 cut(s) 114, 306
PspN4I GGNNCC 2 cut(s) 492, 754
PspPI GGNCC 6 cut(s) 104, 181, 304, 490, 530, 753
PstI CTGCAG 1 cut(s) 868
PstNI CAGNNNCTG 1 cut(s) 656
PsuI RGATCY 1 cut(s) 646
PvuI CGATCG 1 cut(s) 134
RsaI GTAC 4 cut(s) 242, 254, 1430, 1442
RsaNI GTAC 4 cut(s) 241, 253, 1429, 1441
RseI CAYNNNNRTG 1 cut(s) 248
Rsr2I CGGWCCG 1 cut(s) 104
RsrII CGGWCCG 1 cut(s) 104
SapI GCTCTTC 1 cut(s) 1613
SaqAI TTAA 7 cut(s) 110, 231, 380, 635, 875, 941, 1452
SatI GCNGC 8 cut(s) 22, 435, 484, 603, 606, 864, 981, 1437
Sau3AI GATC 7 cut(s) 42, 126, 131, 646, 661, 856, 1462
Sau96I GGNCC 6 cut(s) 104, 181, 304, 490, 530, 753
SchI GAGTC 2 cut(s) 224, 1166
ScrFI CCNGG 3 cut(s) 116, 308, 488
SduI GDGCHC 3 cut(s) 847, 1042, 1392
SfaNI GCATC 5 cut(s) 33, 940, 1177, 1255, 1585
SfcI CTRYAG 1 cut(s) 864
SinI GGWCC 4 cut(s) 104, 181, 530, 753
SmiMI CAYNNNNRTG 1 cut(s) 248
SmlI CTYRAG 2 cut(s) 350, 438
SmoI CTYRAG 2 cut(s) 350, 438
SseBI AGGCCT 1 cut(s) 613
SsiI CCGC 7 cut(s) 21, 248, 296, 1024, 1035, 1154, 1436
SspI AATATT 1 cut(s) 1200
SspMI CTAG 4 cut(s) 599, 693, 897, 1550
StuI AGGCCT 1 cut(s) 613
StyD4I CCNGG 3 cut(s) 114, 306, 486
StyI CCWWGG 2 cut(s) 219, 999
TaaI ACNGT 3 cut(s) 10, 108, 1365
TaiI ACGT 2 cut(s) 595, 1329
TaqI TCGA 4 cut(s) 134, 271, 859, 1160
TatI WGTACW 1 cut(s) 240
TauI GCSGC 2 cut(s) 24, 1439
TfiI GAWTC 2 cut(s) 175, 1297
Tru1I TTAA 7 cut(s) 110, 231, 380, 635, 875, 941, 1452
Tru9I TTAA 7 cut(s) 110, 231, 380, 635, 875, 941, 1452
TseFI GTSAC 3 cut(s) 10, 460, 1365
TseI GCWGC 6 cut(s) 434, 483, 602, 605, 863, 980
Tsp45I GTSAC 3 cut(s) 10, 460, 1365
TspDTI ATGAA 3 cut(s) 790, 1184, 1319
Van91I CCANNNNNTGG 1 cut(s) 1404
VneI GTGCAC 2 cut(s) 1038, 1388
VpaK11BI GGWCC 4 cut(s) 104, 181, 530, 753
VspI ATTAAT 1 cut(s) 380
XagI CCTNNNNNAGG 1 cut(s) 1050
XapI RAATTY 1 cut(s) 287
XceI RCATGY 1 cut(s) 1415
XcmI CCANNNNNNNNNTGG 1 cut(s) 1226
XmiI GTMKAC 1 cut(s) 361
XmnI GAANNNNTTC 4 cut(s) 90, 501, 771, 1137
XspI CTAG 4 cut(s) 599, 693, 897, 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.