Auxin responsive protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G72430 |
| fragaria_vesca | FvH4_6g35410 |
| prunus_persica | Prupe.3G035000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0146941 |
| rosa_laevigata | RLG00000020228 |
| rosa_multiflora | Rmu_sc0003317.1_g000007 Rmu_sc0003317.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00099840 |
| rosa_rugosa | Rorug02G0397600 |
| rosa_samantha | Rh2AG454100 Rh2BG466800 Rh2CG441200 Rh2DG475700 |
| rosa_wichuraiana | Rw2G037080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 125 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 220 |
| AciI | CCGC | 2 cut(s) | 73, 96 |
| AfaI | GTAC | 1 cut(s) | 152 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 220 |
| AflIII | ACRYGT | 1 cut(s) | 228 |
| AjiI | CACGTC | 1 cut(s) | 231 |
| AjnI | CCWGG | 1 cut(s) | 164 |
| AluBI | AGCT | 7 cut(s) | 19, 28, 67, 84, 92, 139, 331 |
| AluI | AGCT | 7 cut(s) | 19, 28, 67, 84, 92, 139, 331 |
| Alw21I | GWGCWC | 1 cut(s) | 279 |
| Alw26I | GTCTC | 2 cut(s) | 133, 299 |
| AoxI | GGCC | 2 cut(s) | 50, 252 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 17, 49 |
| AsuHPI | GGTGA | 4 cut(s) | 52, 61, 194, 251 |
| BanII | GRGCYC | 1 cut(s) | 320 |
| Bbv12I | GWGCWC | 1 cut(s) | 279 |
| BbvI | GCAGC | 1 cut(s) | 79 |
| BccI | CCATC | 2 cut(s) | 42, 215 |
| BciT130I | CCWGG | 1 cut(s) | 166 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcoDI | GTCTC | 2 cut(s) | 133, 299 |
| BisI | GCNGC | 2 cut(s) | 93, 96 |
| BlsI | GCNGC | 2 cut(s) | 94, 97 |
| Bme1390I | CCNGG | 1 cut(s) | 166 |
| BmgBI | CACGTC | 1 cut(s) | 231 |
| BmiI | GGNNCC | 1 cut(s) | 319 |
| BmrFI | CCNGG | 1 cut(s) | 166 |
| BmsI | GCATC | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 1 cut(s) | 14 |
| BsaAI | YACGTR | 1 cut(s) | 154 |
| BsaI | GGTCTC | 1 cut(s) | 133 |
| BsaJI | CCNNGG | 2 cut(s) | 132, 321 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 220 |
| Bse1I | ACTGG | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 166 |
| BseDI | CCNNGG | 2 cut(s) | 132, 321 |
| BseGI | GGATG | 2 cut(s) | 210, 294 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 220 |
| BseMII | CTCAG | 2 cut(s) | 201, 323 |
| BseNI | ACTGG | 1 cut(s) | 225 |
| BseRI | GAGGAG | 1 cut(s) | 184 |
| BseXI | GCAGC | 1 cut(s) | 79 |
| BshFI | GGCC | 2 cut(s) | 52, 254 |
| BsiHKAI | GWGCWC | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 220 |
| BsmAI | GTCTC | 2 cut(s) | 133, 299 |
| BsnI | GGCC | 2 cut(s) | 52, 254 |
| Bso31I | GGTCTC | 1 cut(s) | 133 |
| Bsp1286I | GDGCHC | 2 cut(s) | 279, 320 |
| Bsp143I | GATC | 2 cut(s) | 112, 199 |
| Bsp19I | CCATGG | 1 cut(s) | 321 |
| BspACI | CCGC | 2 cut(s) | 73, 96 |
| BspANI | GGCC | 2 cut(s) | 52, 254 |
| BspCNI | CTCAG | 2 cut(s) | 200, 322 |
| BspHI | TCATGA | 1 cut(s) | 115 |
| BspLI | GGNNCC | 1 cut(s) | 319 |
| BspTNI | GGTCTC | 1 cut(s) | 133 |
| BsrI | ACTGG | 1 cut(s) | 225 |
| BssECI | CCNNGG | 2 cut(s) | 132, 321 |
| BssMI | GATC | 2 cut(s) | 112, 199 |
| BssT1I | CCWWGG | 2 cut(s) | 132, 321 |
| Bst2UI | CCWGG | 1 cut(s) | 166 |
| BstBAI | YACGTR | 1 cut(s) | 154 |
| BstDEI | CTNAG | 2 cut(s) | 187, 309 |
| BstDSI | CCRYGG | 1 cut(s) | 321 |
| BstF5I | GGATG | 2 cut(s) | 210, 294 |
| BstKTI | GATC | 2 cut(s) | 115, 202 |
| BstMAI | GTCTC | 2 cut(s) | 133, 299 |
| BstMBI | GATC | 2 cut(s) | 112, 199 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 25, 81, 274, 289 |
| BstNI | CCWGG | 1 cut(s) | 166 |
| BstSCI | CCNGG | 1 cut(s) | 164 |
| BstV1I | GCAGC | 1 cut(s) | 79 |
| BsuRI | GGCC | 2 cut(s) | 52, 254 |
| BtgI | CCRYGG | 1 cut(s) | 321 |
| BtrI | CACGTC | 1 cut(s) | 231 |
| BtsCI | GGATG | 2 cut(s) | 210, 294 |
| CciI | TCATGA | 1 cut(s) | 115 |
| Csp6I | GTAC | 1 cut(s) | 151 |
| CviAII | CATG | 3 cut(s) | 116, 143, 322 |
| CviQI | GTAC | 1 cut(s) | 151 |
| DdeI | CTNAG | 2 cut(s) | 187, 309 |
| DpnI | GATC | 2 cut(s) | 114, 201 |
| DpnII | GATC | 2 cut(s) | 112, 199 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 125 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 125 |
| Eco130I | CCWWGG | 2 cut(s) | 132, 321 |
| Eco24I | GRGCYC | 1 cut(s) | 320 |
| Eco31I | GGTCTC | 1 cut(s) | 133 |
| EcoRII | CCWGG | 1 cut(s) | 164 |
| EcoT14I | CCWWGG | 2 cut(s) | 132, 321 |
| EcoT38I | GRGCYC | 1 cut(s) | 320 |
| ErhI | CCWWGG | 2 cut(s) | 132, 321 |
| FaeI | CATG | 3 cut(s) | 119, 146, 325 |
| FaiI | YATR | 5 cut(s) | 41, 89, 117, 144, 323 |
| FatI | CATG | 3 cut(s) | 115, 142, 321 |
| FauI | CCCGC | 1 cut(s) | 80 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| Fnu4HI | GCNGC | 2 cut(s) | 93, 96 |
| FokI | GGATG | 2 cut(s) | 197, 301 |
| FriOI | GRGCYC | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 2 cut(s) | 93, 96 |
| GluI | GCNGC | 2 cut(s) | 93, 96 |
| HaeIII | GGCC | 2 cut(s) | 52, 254 |
| Hin1II | CATG | 3 cut(s) | 119, 146, 325 |
| HincII | GTYRAC | 1 cut(s) | 184 |
| HindII | GTYRAC | 1 cut(s) | 184 |
| HinfI | GANTC | 2 cut(s) | 107, 307 |
| HphI | GGTGA | 4 cut(s) | 52, 61, 194, 251 |
| Hpy166II | GTNNAC | 3 cut(s) | 151, 184, 226 |
| Hpy188I | TCNGA | 3 cut(s) | 112, 190, 304 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| Hpy8I | GTNNAC | 3 cut(s) | 151, 184, 226 |
| HpyAV | CCTTC | 1 cut(s) | 63 |
| HpyCH4IV | ACGT | 2 cut(s) | 153, 230 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 25, 81, 274, 289 |
| HpyF3I | CTNAG | 2 cut(s) | 187, 309 |
| HpySE526I | ACGT | 2 cut(s) | 153, 230 |
| Hsp92II | CATG | 3 cut(s) | 119, 146, 325 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 2 cut(s) | 112, 199 |
| LmnI | GCTCC | 3 cut(s) | 89, 136, 323 |
| LpnPI | CCDG | 6 cut(s) | 151, 178, 206, 222, 268, 278 |
| Lsp1109I | GCAGC | 1 cut(s) | 79 |
| LweI | GCATC | 1 cut(s) | 279 |
| MaeII | ACGT | 2 cut(s) | 153, 230 |
| MalI | GATC | 2 cut(s) | 114, 201 |
| MboI | GATC | 2 cut(s) | 112, 199 |
| MhlI | GDGCHC | 2 cut(s) | 279, 320 |
| MlyI | GAGTC | 1 cut(s) | 301 |
| MnlI | CCTC | 3 cut(s) | 162, 235, 253 |
| MspR9I | CCNGG | 1 cut(s) | 166 |
| MvaI | CCWGG | 1 cut(s) | 166 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 25, 81, 274, 289 |
| NcoI | CCATGG | 1 cut(s) | 321 |
| NdeII | GATC | 2 cut(s) | 112, 199 |
| NlaIII | CATG | 3 cut(s) | 119, 146, 325 |
| NlaIV | GGNNCC | 1 cut(s) | 319 |
| PagI | TCATGA | 1 cut(s) | 115 |
| PfeI | GAWTC | 1 cut(s) | 107 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 220 |
| PfoI | TCCNGGA | 1 cut(s) | 164 |
| PkrI | GCNGC | 2 cut(s) | 94, 97 |
| PleI | GAGTC | 1 cut(s) | 301 |
| PpsI | GAGTC | 1 cut(s) | 301 |
| Ppu21I | YACGTR | 1 cut(s) | 154 |
| Psp6I | CCWGG | 1 cut(s) | 164 |
| PspGI | CCWGG | 1 cut(s) | 164 |
| PspN4I | GGNNCC | 1 cut(s) | 319 |
| RsaI | GTAC | 1 cut(s) | 152 |
| RsaNI | GTAC | 1 cut(s) | 151 |
| SatI | GCNGC | 2 cut(s) | 93, 96 |
| Sau3AI | GATC | 2 cut(s) | 112, 199 |
| SchI | GAGTC | 1 cut(s) | 301 |
| ScrFI | CCNGG | 1 cut(s) | 166 |
| SduI | GDGCHC | 2 cut(s) | 279, 320 |
| SfaNI | GCATC | 1 cut(s) | 279 |
| SmlI | CTYRAG | 1 cut(s) | 29 |
| SmoI | CTYRAG | 1 cut(s) | 29 |
| SsiI | CCGC | 2 cut(s) | 73, 96 |
| StyD4I | CCNGG | 1 cut(s) | 164 |
| StyI | CCWWGG | 2 cut(s) | 132, 321 |
| TaiI | ACGT | 2 cut(s) | 156, 233 |
| TauI | GCSGC | 1 cut(s) | 98 |
| TfiI | GAWTC | 1 cut(s) | 107 |
| TseI | GCWGC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 2 cut(s) | 45, 131 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 220 |