Transmembrane 9 superfamily member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55130 AT3G13772 |
| fragaria_vesca | FvH4_6g33330 FvH4_6g33330 |
| malus_domestica | MD09G1193600.v1.1 MD17G1174300.v1.1 |
| prunus_persica | Prupe.3G050000_v2.0.a1 Prupe.3G050000_v2.0.a1 |
| pyrus_communis | pycom09g11010 pycom17g17840 |
| rosa_chinensis | RchiOBHm_Chr1g0327081 RchiOBHm_Chr2g0143181 |
| rosa_laevigata | RLG00000020011 |
| rosa_multiflora | Rmu_sc0008800.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00102070 |
| rosa_rugosa | Rorug02G0378900 |
| rosa_samantha | Rh2AG431700 Rh2BG440300 Rh2CG417600 Rh2DG450500 |
| rosa_wichuraiana | Rw2G035270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 848 |
| AarI | CACCTGC | 1 cut(s) | 1453 |
| Acc36I | ACCTGC | 1 cut(s) | 1453 |
| AccB1I | GGYRCC | 2 cut(s) | 1006, 1465 |
| AccI | GTMKAC | 1 cut(s) | 279 |
| AccII | CGCG | 2 cut(s) | 108, 255 |
| AciI | CCGC | 6 cut(s) | 253, 255, 262, 436, 1643, 1719 |
| AclWI | GGATC | 5 cut(s) | 20, 560, 823, 1798, 1811 |
| AcsI | RAATTY | 5 cut(s) | 271, 355, 850, 1263, 1452 |
| AfaI | GTAC | 8 cut(s) | 25, 205, 390, 557, 806, 1199, 1216, 1820 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 955, 1302, 1303 |
| AflIII | ACRYGT | 1 cut(s) | 801 |
| AgsI | TTSAA | 6 cut(s) | 221, 289, 487, 1210, 1414, 1430 |
| AjnI | CCWGG | 2 cut(s) | 91, 1258 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 456, 488, 644, 676 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 693, 725 |
| AluBI | AGCT | 8 cut(s) | 151, 320, 334, 543, 982, 1535, 1549, 1792 |
| AluI | AGCT | 8 cut(s) | 151, 320, 334, 543, 982, 1535, 1549, 1792 |
| Alw21I | GWGCWC | 1 cut(s) | 57 |
| Alw26I | GTCTC | 4 cut(s) | 566, 763, 1113, 1133 |
| AlwI | GGATC | 5 cut(s) | 20, 560, 823, 1798, 1811 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 419 |
| ApoI | RAATTY | 5 cut(s) | 271, 355, 850, 1263, 1452 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1583 |
| AsuC2I | CCSGG | 1 cut(s) | 699 |
| AsuHPI | GGTGA | 1 cut(s) | 269 |
| BaeGI | GKGCMC | 1 cut(s) | 1009 |
| BamHI | GGATCC | 1 cut(s) | 1803 |
| BanI | GGYRCC | 2 cut(s) | 1006, 1465 |
| BbsI | GAAGAC | 5 cut(s) | 37, 1308, 1437, 1448, 1692 |
| Bbv12I | GWGCWC | 1 cut(s) | 57 |
| BbvCI | CCTCAGC | 1 cut(s) | 70 |
| BccI | CCATC | 2 cut(s) | 434, 969 |
| BceAI | ACGGC | 1 cut(s) | 1259 |
| BciT130I | CCWGG | 2 cut(s) | 93, 1260 |
| BclI | TGATCA | 3 cut(s) | 823, 894, 1632 |
| BcnI | CCSGG | 1 cut(s) | 699 |
| BcoDI | GTCTC | 4 cut(s) | 566, 763, 1113, 1133 |
| BfaI | CTAG | 1 cut(s) | 1793 |
| BfuAI | ACCTGC | 1 cut(s) | 1453 |
| BglII | AGATCT | 2 cut(s) | 1056, 1899 |
| Bme1390I | CCNGG | 3 cut(s) | 93, 699, 1260 |
| BmiI | GGNNCC | 4 cut(s) | 1008, 1467, 1805, 1861 |
| BmrFI | CCNGG | 3 cut(s) | 93, 699, 1260 |
| BmsI | GCATC | 2 cut(s) | 328, 797 |
| BoxI | GACNNNNGTC | 1 cut(s) | 41 |
| BpiI | GAAGAC | 5 cut(s) | 37, 1308, 1437, 1448, 1692 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1113, 1145 |
| BpmI | CTGGAG | 1 cut(s) | 141 |
| Bpu10I | CCTNAGC | 1 cut(s) | 70 |
| BpuEI | CTTGAG | 2 cut(s) | 559, 945 |
| BpuMI | CCSGG | 1 cut(s) | 699 |
| BsaAI | YACGTR | 1 cut(s) | 804 |
| BsaBI | GATNNNNATC | 1 cut(s) | 381 |
| BsaI | GGTCTC | 2 cut(s) | 566, 1133 |
| BsaJI | CCNNGG | 5 cut(s) | 253, 1120, 1140, 1185, 1457 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 955, 1302, 1303 |
| Bse1I | ACTGG | 9 cut(s) | 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861 |
| Bse3DI | GCAATG | 1 cut(s) | 1091 |
| Bse8I | GATNNNNATC | 1 cut(s) | 381 |
| BseBI | CCWGG | 2 cut(s) | 93, 1260 |
| BseDI | CCNNGG | 5 cut(s) | 253, 1120, 1140, 1185, 1457 |
| BseGI | GGATG | 2 cut(s) | 445, 980 |
| BseJI | GATNNNNATC | 1 cut(s) | 381 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 955, 1302, 1303 |
| BseMI | GCAATG | 1 cut(s) | 1091 |
| BseMII | CTCAG | 4 cut(s) | 84, 439, 561, 671 |
| BseNI | ACTGG | 9 cut(s) | 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861 |
| BseSI | GKGCMC | 1 cut(s) | 1009 |
| BseYI | CCCAGC | 2 cut(s) | 500, 1096 |
| BsgI | GTGCAG | 1 cut(s) | 249 |
| Bsh1236I | CGCG | 2 cut(s) | 108, 255 |
| BshNI | GGYRCC | 2 cut(s) | 1006, 1465 |
| BsiHKAI | GWGCWC | 1 cut(s) | 57 |
| BsiSI | CCGG | 1 cut(s) | 698 |
| BslFI | GGGAC | 4 cut(s) | 432, 812, 1057, 1351 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 955, 1302, 1303 |
| BsmAI | GTCTC | 4 cut(s) | 566, 763, 1113, 1133 |
| BsmFI | GGGAC | 4 cut(s) | 432, 812, 1057, 1351 |
| BsmI | GAATGC | 2 cut(s) | 1297, 1518 |
| Bso31I | GGTCTC | 2 cut(s) | 566, 1133 |
| Bsp1286I | GDGCHC | 2 cut(s) | 57, 1009 |
| Bsp1407I | TGTACA | 1 cut(s) | 1197 |
| Bsp19I | CCATGG | 1 cut(s) | 1140 |
| Bsp68I | TCGCGA | 1 cut(s) | 108 |
| BspACI | CCGC | 6 cut(s) | 253, 255, 262, 436, 1643, 1719 |
| BspCNI | CTCAG | 4 cut(s) | 83, 438, 562, 670 |
| BspFNI | CGCG | 2 cut(s) | 108, 255 |
| BspHI | TCATGA | 4 cut(s) | 625, 813, 897, 1131 |
| BspLI | GGNNCC | 4 cut(s) | 1008, 1467, 1805, 1861 |
| BspMI | ACCTGC | 1 cut(s) | 1453 |
| BspPI | GGATC | 5 cut(s) | 20, 560, 823, 1798, 1811 |
| BspT107I | GGYRCC | 2 cut(s) | 1006, 1465 |
| BspTNI | GGTCTC | 2 cut(s) | 566, 1133 |
| BsrDI | GCAATG | 1 cut(s) | 1091 |
| BsrGI | TGTACA | 1 cut(s) | 1197 |
| BsrI | ACTGG | 9 cut(s) | 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861 |
| BssECI | CCNNGG | 5 cut(s) | 253, 1120, 1140, 1185, 1457 |
| BssNAI | GTATAC | 1 cut(s) | 280 |
| BssT1I | CCWWGG | 1 cut(s) | 1140 |
| Bst1107I | GTATAC | 1 cut(s) | 280 |
| Bst2UI | CCWGG | 2 cut(s) | 93, 1260 |
| Bst4CI | ACNGT | 3 cut(s) | 227, 617, 709 |
| Bst6I | CTCTTC | 2 cut(s) | 875, 1220 |
| BstAUI | TGTACA | 1 cut(s) | 1197 |
| BstBAI | YACGTR | 1 cut(s) | 804 |
| BstC8I | GCNNGC | 3 cut(s) | 1476, 1723, 1879 |
| BstDEI | CTNAG | 4 cut(s) | 70, 425, 570, 657 |
| BstDSI | CCRYGG | 2 cut(s) | 253, 1140 |
| BstEII | GGTNACC | 1 cut(s) | 257 |
| BstF5I | GGATG | 2 cut(s) | 445, 980 |
| BstFNI | CGCG | 2 cut(s) | 108, 255 |
| BstMAI | GTCTC | 4 cut(s) | 566, 763, 1113, 1133 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 261, 347 |
| BstNI | CCWGG | 2 cut(s) | 93, 1260 |
| BstNSI | RCATGY | 3 cut(s) | 672, 1825, 1881 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 41 |
| BstPI | GGTNACC | 1 cut(s) | 257 |
| BstSCI | CCNGG | 3 cut(s) | 91, 697, 1258 |
| BstSLI | GKGCMC | 1 cut(s) | 1009 |
| BstUI | CGCG | 2 cut(s) | 108, 255 |
| BstV2I | GAAGAC | 5 cut(s) | 37, 1308, 1437, 1448, 1692 |
| BstX2I | RGATCY | 6 cut(s) | 12, 565, 828, 1056, 1803, 1899 |
| BstYI | RGATCY | 6 cut(s) | 12, 565, 828, 1056, 1803, 1899 |
| BstZ17I | GTATAC | 1 cut(s) | 280 |
| BtgI | CCRYGG | 2 cut(s) | 253, 1140 |
| BtsCI | GGATG | 2 cut(s) | 445, 980 |
| BtsI | GCAGTG | 2 cut(s) | 76, 1687 |
| BtsIMutI | CAGTG | 9 cut(s) | 76, 117, 232, 705, 832, 1383, 1500, 1687, 1693 |
| BtuMI | TCGCGA | 1 cut(s) | 108 |
| BveI | ACCTGC | 1 cut(s) | 1453 |
| Cac8I | GCNNGC | 3 cut(s) | 1476, 1723, 1879 |
| CaiI | CAGNNNCTG | 1 cut(s) | 419 |
| CciI | TCATGA | 4 cut(s) | 625, 813, 897, 1131 |
| Cfr42I | CCGCGG | 1 cut(s) | 256 |
| Csp6I | GTAC | 8 cut(s) | 24, 204, 389, 556, 805, 1198, 1215, 1819 |
| CviQI | GTAC | 8 cut(s) | 24, 204, 389, 556, 805, 1198, 1215, 1819 |
| DdeI | CTNAG | 4 cut(s) | 70, 425, 570, 657 |
| Eam1104I | CTCTTC | 2 cut(s) | 875, 1220 |
| EarI | CTCTTC | 2 cut(s) | 875, 1220 |
| Eco130I | CCWWGG | 1 cut(s) | 1140 |
| Eco31I | GGTCTC | 2 cut(s) | 566, 1133 |
| Eco32I | GATATC | 1 cut(s) | 922 |
| Eco91I | GGTNACC | 1 cut(s) | 257 |
| EcoO65I | GGTNACC | 1 cut(s) | 257 |
| EcoRI | GAATTC | 2 cut(s) | 271, 1263 |
| EcoRII | CCWGG | 2 cut(s) | 91, 1258 |
| EcoRV | GATATC | 1 cut(s) | 922 |
| EcoT14I | CCWWGG | 1 cut(s) | 1140 |
| ErhI | CCWWGG | 1 cut(s) | 1140 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1232, 1264 |
| FaqI | GGGAC | 4 cut(s) | 432, 812, 1057, 1351 |
| FauI | CCCGC | 1 cut(s) | 429 |
| FauNDI | CATATG | 3 cut(s) | 178, 751, 1837 |
| FbaI | TGATCA | 3 cut(s) | 823, 894, 1632 |
| FblI | GTMKAC | 1 cut(s) | 279 |
| FokI | GGATG | 2 cut(s) | 452, 987 |
| FspBI | CTAG | 1 cut(s) | 1793 |
| GsaI | CCCAGC | 2 cut(s) | 504, 1100 |
| GsuI | CTGGAG | 1 cut(s) | 141 |
| HapII | CCGG | 1 cut(s) | 698 |
| HincII | GTYRAC | 1 cut(s) | 724 |
| HindII | GTYRAC | 1 cut(s) | 724 |
| HindIII | AAGCTT | 2 cut(s) | 332, 980 |
| HinfI | GANTC | 3 cut(s) | 344, 483, 578 |
| HpaII | CCGG | 1 cut(s) | 698 |
| HphI | GGTGA | 1 cut(s) | 269 |
| Hpy166II | GTNNAC | 4 cut(s) | 145, 280, 724, 1036 |
| Hpy188I | TCNGA | 7 cut(s) | 428, 548, 828, 1056, 1370, 1632, 1896 |
| Hpy8I | GTNNAC | 4 cut(s) | 145, 280, 724, 1036 |
| HpyAV | CCTTC | 7 cut(s) | 98, 140, 419, 1122, 1637, 1751, 1768 |
| HpyCH4III | ACNGT | 3 cut(s) | 227, 617, 709 |
| HpyCH4IV | ACGT | 2 cut(s) | 803, 1038 |
| HpyCH4V | TGCA | 5 cut(s) | 230, 350, 672, 1091, 1680 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 261, 347 |
| HpyF3I | CTNAG | 4 cut(s) | 70, 425, 570, 657 |
| HpySE526I | ACGT | 2 cut(s) | 803, 1038 |
| Ksp22I | TGATCA | 3 cut(s) | 823, 894, 1632 |
| KspI | CCGCGG | 1 cut(s) | 256 |
| LmnI | GCTCC | 4 cut(s) | 60, 106, 301, 1532 |
| LweI | GCATC | 2 cut(s) | 328, 797 |
| MaeI | CTAG | 1 cut(s) | 1793 |
| MaeII | ACGT | 2 cut(s) | 803, 1038 |
| MaeIII | GTNAC | 4 cut(s) | 257, 604, 1075, 1178 |
| MfeI | CAATTG | 1 cut(s) | 938 |
| MflI | RGATCY | 6 cut(s) | 12, 565, 828, 1056, 1803, 1899 |
| MhlI | GDGCHC | 2 cut(s) | 57, 1009 |
| MmeI | TCCRAC | 3 cut(s) | 460, 1140, 1758 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1583 |
| MseI | TTAA | 5 cut(s) | 194, 360, 765, 987, 1238 |
| MspA1I | CMGCKG | 2 cut(s) | 255, 1721 |
| MspI | CCGG | 1 cut(s) | 698 |
| MspR9I | CCNGG | 3 cut(s) | 93, 699, 1260 |
| MunI | CAATTG | 1 cut(s) | 938 |
| Mva1269I | GAATGC | 2 cut(s) | 1297, 1518 |
| MvaI | CCWGG | 2 cut(s) | 93, 1260 |
| MvnI | CGCG | 2 cut(s) | 108, 255 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 261, 347 |
| NciI | CCSGG | 1 cut(s) | 699 |
| NcoI | CCATGG | 1 cut(s) | 1140 |
| NdeI | CATATG | 3 cut(s) | 178, 751, 1837 |
| NlaIV | GGNNCC | 4 cut(s) | 1008, 1467, 1805, 1861 |
| NmeAIII | GCCGAG | 2 cut(s) | 1166, 1438 |
| NmuCI | GTSAC | 2 cut(s) | 257, 604 |
| NruI | TCGCGA | 1 cut(s) | 108 |
| NspI | RCATGY | 3 cut(s) | 672, 1825, 1881 |
| PaeI | GCATGC | 1 cut(s) | 1881 |
| PagI | TCATGA | 4 cut(s) | 625, 813, 897, 1131 |
| PaqCI | CACCTGC | 1 cut(s) | 1453 |
| PctI | GAATGC | 2 cut(s) | 1297, 1518 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1583 |
| PfeI | GAWTC | 3 cut(s) | 344, 483, 578 |
| PfoI | TCCNGGA | 1 cut(s) | 1258 |
| Ppu21I | YACGTR | 1 cut(s) | 804 |
| PshAI | GACNNNNGTC | 1 cut(s) | 41 |
| PsiI | TTATAA | 1 cut(s) | 848 |
| Psp6I | CCWGG | 2 cut(s) | 91, 1258 |
| PspEI | GGTNACC | 1 cut(s) | 257 |
| PspFI | CCCAGC | 2 cut(s) | 500, 1096 |
| PspGI | CCWGG | 2 cut(s) | 91, 1258 |
| PspN4I | GGNNCC | 4 cut(s) | 1008, 1467, 1805, 1861 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1190, 1222 |
| PstNI | CAGNNNCTG | 1 cut(s) | 419 |
| PsuI | RGATCY | 6 cut(s) | 12, 565, 828, 1056, 1803, 1899 |
| RruI | TCGCGA | 1 cut(s) | 108 |
| RsaI | GTAC | 8 cut(s) | 25, 205, 390, 557, 806, 1199, 1216, 1820 |
| RsaNI | GTAC | 8 cut(s) | 24, 204, 389, 556, 805, 1198, 1215, 1819 |
| SacII | CCGCGG | 1 cut(s) | 256 |
| SaqAI | TTAA | 5 cut(s) | 194, 360, 765, 987, 1238 |
| ScrFI | CCNGG | 3 cut(s) | 93, 699, 1260 |
| SduI | GDGCHC | 2 cut(s) | 57, 1009 |
| SfaNI | GCATC | 2 cut(s) | 328, 797 |
| Sfr303I | CCGCGG | 1 cut(s) | 256 |
| SgrBI | CCGCGG | 1 cut(s) | 256 |
| SmlI | CTYRAG | 2 cut(s) | 538, 960 |
| SmoI | CTYRAG | 2 cut(s) | 538, 960 |
| SphI | GCATGC | 1 cut(s) | 1881 |
| SsiI | CCGC | 6 cut(s) | 253, 255, 262, 436, 1643, 1719 |
| SspI | AATATT | 1 cut(s) | 200 |
| SspMI | CTAG | 1 cut(s) | 1793 |
| StyD4I | CCNGG | 3 cut(s) | 91, 697, 1258 |
| StyI | CCWWGG | 1 cut(s) | 1140 |
| TaaI | ACNGT | 3 cut(s) | 227, 617, 709 |
| TaiI | ACGT | 2 cut(s) | 806, 1041 |
| TaqI | TCGA | 3 cut(s) | 325, 385, 586 |
| TaqII | GACCGA | 1 cut(s) | 590 |
| TatI | WGTACW | 2 cut(s) | 388, 1197 |
| TfiI | GAWTC | 3 cut(s) | 344, 483, 578 |
| Tru1I | TTAA | 5 cut(s) | 194, 360, 765, 987, 1238 |
| Tru9I | TTAA | 5 cut(s) | 194, 360, 765, 987, 1238 |
| TscAI | CASTG | 9 cut(s) | 83, 124, 232, 712, 839, 1383, 1500, 1687, 1700 |
| TseFI | GTSAC | 2 cut(s) | 257, 604 |
| Tsp45I | GTSAC | 2 cut(s) | 257, 604 |
| TspDTI | ATGAA | 8 cut(s) | 477, 514, 642, 830, 1150, 1502, 1531, 1824 |
| TspRI | CASTG | 9 cut(s) | 83, 124, 232, 712, 839, 1383, 1500, 1687, 1700 |
| XapI | RAATTY | 5 cut(s) | 271, 355, 850, 1263, 1452 |
| XceI | RCATGY | 3 cut(s) | 672, 1825, 1881 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1476 |
| XmiI | GTMKAC | 1 cut(s) | 279 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1583 |
| XspI | CTAG | 1 cut(s) | 1793 |