Prupe.3G050000_v2.0.a1
ERF Family

Transmembrane 9 superfamily member

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
3530360 .. 3534766
4407 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G050000.2

Sequence Viewer

Length: 1926 bp
ATGGGTAGGAGGATCTCCTCCCGTACAACAAGGACGACCCTTGTCTTCTGTGTGCTCCTCCTCATCTCCTCAGCCCACTGCTTCTACCTTCCAGGCGTTGCTCCTCGCGATTTCCACACTGGAGATGACCTTCCTATCAAAGTGAACAAGCTGTCATCTACAAAGACACAACTCCCATATGATTACTACTTCTTAAAATATTGTACCCCCAAACAGATTGAAAACAGTGCAGAAAATCTGGGGGAGGTTCTCCGCGGTGACCGCATTGAGAATTCTGTATACTCTTTCAAAATGAGGGAGGAGCAATCCTGTGTAGTAGCTTGTCGAGTAAAGCTTGATGCTGAATCTGCAAAAAATTTTAAGGAAAAAATTGATGATAAATATCGAGTACAAATGATTTTGGATAACCTTCCAGTTGCTGTTCTCAGACAAAGGCGGGATGGAAGTCCCTCAACAACTTATGAACATGGATTTGGTGTTGGATTCAAAGGAAATTATGCTGGGAGTAAAGAGGAAAGATATTTCATCAACAACCACTTGAGCTTCCGAGTTATGTACCACAAAGATCCTGAGACCGATTCTGCTCGAATTGTTGGGTTTGAGGTCACTCCAAACAGTATCAATCATGAATATAAGGAGTGGAATGATAAGAATACTCAGTTGGCAACATGCAATAAAGACACGAAAAATCTACCACCGGGAAGCACTGTTCCACAAGAAGTTGACAAAGATAAGGAGATAGTATTTACATATGATGTCTCTTTTAAGGAAAGTGGTATAAAATGGGCATCTCGTTGGGACACGTACCTCCTCATGAATGATGATCAGATCCACTGGTTCTCAATTATAAATTCTCTTATGATTGTCCTCTTCTTATCTGGTATGGTGGCTATGATCATGATGAGAACTCTATACAGAGATATCGCCAACTATAATCAATTGGACACCCAAGAGGAGGCTCAAGAAGAAACTGGATGGAAGCTTGTTAATGGAGATGTTTTTAGGGCACCAATCAATTCCAATTTACTTTGCGTTTACGTTGGGACGGGGGTTCAGATCTTTGGAATGACACTCGTAACCATGATATTTGCATTGCTGGGCTTCTTGTCTCCTTCCAACCGAGGAGGTCTCATGACTGCCATGGTTCTCTTGTGGGTTTTCATGGGCTTATTTGCTGGTTACTCCTCGGCACGATTGTACAAAATGTTCAAGGGTACAGAGTGGAAGAGGAATACCTTAAAGACTGCCTTTATGTTTCCAGGAATTCTTTTTGCCGTATTCTTTGTGCTGAATGCCCTAATTTGGGGGGAGAAGTCTTCTGGGGCTGTGCCTTTTGGGACAATGTTTGCTCTGGTTTGCTTATGGTTCGGAATATCAGTGCCATTGGTCTTTGTGGGTAGTTATTTGGGGTTCAAGAAACCACCTGTTGAAGACCCTGTGAAGACTAACAAAATTCCTCGGCAGGTGCCAGAGCAGGCATGGTATATGAAACCAGTGTTCTCTATACTTATTGGAGGCATTCTTCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTTATCTTGACATCAATTTGGCTGAACCAGTTCTATTATATCTTCGGCTTCCTTTTTATTGTGTTTGTTATCCTTCTGATCACTTGTGCGGAGATAACAATGGTGCTATGCTACTTCCAGTTATGCAGTGAAGACTACCACTGGTGGTGGAGATCATACCTGACCGCTGGCTCATCTGCCCTTTACCTTCTCCTTTACTCTGCCTTCTACTTCTTTACCAAGTTGGAGATCACGAAGCTAGTTTCAGGGATCCTTTACTTTGGGTACATGCTGATTGTTTCATATGCTTTCTTTGTCCTGACTGGAACCATTGGTTTCTACGCATGCTTCTGGTTTGTTCGGAAGATCTACTCCTCTGTGAAGATTGACTGA

Protein Analysis

642

Amino Acids

73.64

Weight (kDa)

8.59

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 848
AarI CACCTGC 1 cut(s) 1453
Acc36I ACCTGC 1 cut(s) 1453
AccB1I GGYRCC 2 cut(s) 1006, 1465
AccI GTMKAC 1 cut(s) 279
AccII CGCG 2 cut(s) 108, 255
AciI CCGC 6 cut(s) 253, 255, 262, 436, 1643, 1719
AclWI GGATC 5 cut(s) 20, 560, 823, 1798, 1811
AcsI RAATTY 5 cut(s) 271, 355, 850, 1263, 1452
AfaI GTAC 8 cut(s) 25, 205, 390, 557, 806, 1199, 1216, 1820
AfiI CCNNNNNNNGG 3 cut(s) 955, 1302, 1303
AflIII ACRYGT 1 cut(s) 801
AgsI TTSAA 6 cut(s) 221, 289, 487, 1210, 1414, 1430
AjnI CCWGG 2 cut(s) 91, 1258
AjuI GAANNNNNNNTTGG 4 cut(s) 456, 488, 644, 676
AloI GAACNNNNNNTCC 2 cut(s) 693, 725
AluBI AGCT 8 cut(s) 151, 320, 334, 543, 982, 1535, 1549, 1792
AluI AGCT 8 cut(s) 151, 320, 334, 543, 982, 1535, 1549, 1792
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 4 cut(s) 566, 763, 1113, 1133
AlwI GGATC 5 cut(s) 20, 560, 823, 1798, 1811
AlwNI CAGNNNCTG 1 cut(s) 419
ApoI RAATTY 5 cut(s) 271, 355, 850, 1263, 1452
Asp700I GAANNNNTTC 1 cut(s) 1583
AsuC2I CCSGG 1 cut(s) 699
AsuHPI GGTGA 1 cut(s) 269
BaeGI GKGCMC 1 cut(s) 1009
BamHI GGATCC 1 cut(s) 1803
BanI GGYRCC 2 cut(s) 1006, 1465
BbsI GAAGAC 5 cut(s) 37, 1308, 1437, 1448, 1692
Bbv12I GWGCWC 1 cut(s) 57
BbvCI CCTCAGC 1 cut(s) 70
BccI CCATC 2 cut(s) 434, 969
BceAI ACGGC 1 cut(s) 1259
BciT130I CCWGG 2 cut(s) 93, 1260
BclI TGATCA 3 cut(s) 823, 894, 1632
BcnI CCSGG 1 cut(s) 699
BcoDI GTCTC 4 cut(s) 566, 763, 1113, 1133
BfaI CTAG 1 cut(s) 1793
BfuAI ACCTGC 1 cut(s) 1453
BglII AGATCT 2 cut(s) 1056, 1899
Bme1390I CCNGG 3 cut(s) 93, 699, 1260
BmiI GGNNCC 4 cut(s) 1008, 1467, 1805, 1861
BmrFI CCNGG 3 cut(s) 93, 699, 1260
BmsI GCATC 2 cut(s) 328, 797
BoxI GACNNNNGTC 1 cut(s) 41
BpiI GAAGAC 5 cut(s) 37, 1308, 1437, 1448, 1692
BplI GAGNNNNNCTC 2 cut(s) 1113, 1145
BpmI CTGGAG 1 cut(s) 141
Bpu10I CCTNAGC 1 cut(s) 70
BpuEI CTTGAG 2 cut(s) 559, 945
BpuMI CCSGG 1 cut(s) 699
BsaAI YACGTR 1 cut(s) 804
BsaBI GATNNNNATC 1 cut(s) 381
BsaI GGTCTC 2 cut(s) 566, 1133
BsaJI CCNNGG 5 cut(s) 253, 1120, 1140, 1185, 1457
Bsc4I CCNNNNNNNGG 3 cut(s) 955, 1302, 1303
Bse1I ACTGG 9 cut(s) 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861
Bse3DI GCAATG 1 cut(s) 1091
Bse8I GATNNNNATC 1 cut(s) 381
BseBI CCWGG 2 cut(s) 93, 1260
BseDI CCNNGG 5 cut(s) 253, 1120, 1140, 1185, 1457
BseGI GGATG 2 cut(s) 445, 980
BseJI GATNNNNATC 1 cut(s) 381
BseLI CCNNNNNNNGG 3 cut(s) 955, 1302, 1303
BseMI GCAATG 1 cut(s) 1091
BseMII CTCAG 4 cut(s) 84, 439, 561, 671
BseNI ACTGG 9 cut(s) 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861
BseSI GKGCMC 1 cut(s) 1009
BseYI CCCAGC 2 cut(s) 500, 1096
BsgI GTGCAG 1 cut(s) 249
Bsh1236I CGCG 2 cut(s) 108, 255
BshNI GGYRCC 2 cut(s) 1006, 1465
BsiHKAI GWGCWC 1 cut(s) 57
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 4 cut(s) 432, 812, 1057, 1351
BslI CCNNNNNNNGG 3 cut(s) 955, 1302, 1303
BsmAI GTCTC 4 cut(s) 566, 763, 1113, 1133
BsmFI GGGAC 4 cut(s) 432, 812, 1057, 1351
BsmI GAATGC 2 cut(s) 1297, 1518
Bso31I GGTCTC 2 cut(s) 566, 1133
Bsp1286I GDGCHC 2 cut(s) 57, 1009
Bsp1407I TGTACA 1 cut(s) 1197
Bsp19I CCATGG 1 cut(s) 1140
Bsp68I TCGCGA 1 cut(s) 108
BspACI CCGC 6 cut(s) 253, 255, 262, 436, 1643, 1719
BspCNI CTCAG 4 cut(s) 83, 438, 562, 670
BspFNI CGCG 2 cut(s) 108, 255
BspHI TCATGA 4 cut(s) 625, 813, 897, 1131
BspLI GGNNCC 4 cut(s) 1008, 1467, 1805, 1861
BspMI ACCTGC 1 cut(s) 1453
BspPI GGATC 5 cut(s) 20, 560, 823, 1798, 1811
BspT107I GGYRCC 2 cut(s) 1006, 1465
BspTNI GGTCTC 2 cut(s) 566, 1133
BsrDI GCAATG 1 cut(s) 1091
BsrGI TGTACA 1 cut(s) 1197
BsrI ACTGG 9 cut(s) 124, 413, 839, 976, 1493, 1582, 1672, 1700, 1861
BssECI CCNNGG 5 cut(s) 253, 1120, 1140, 1185, 1457
BssNAI GTATAC 1 cut(s) 280
BssT1I CCWWGG 1 cut(s) 1140
Bst1107I GTATAC 1 cut(s) 280
Bst2UI CCWGG 2 cut(s) 93, 1260
Bst4CI ACNGT 3 cut(s) 227, 617, 709
Bst6I CTCTTC 2 cut(s) 875, 1220
BstAUI TGTACA 1 cut(s) 1197
BstBAI YACGTR 1 cut(s) 804
BstC8I GCNNGC 3 cut(s) 1476, 1723, 1879
BstDEI CTNAG 4 cut(s) 70, 425, 570, 657
BstDSI CCRYGG 2 cut(s) 253, 1140
BstEII GGTNACC 1 cut(s) 257
BstF5I GGATG 2 cut(s) 445, 980
BstFNI CGCG 2 cut(s) 108, 255
BstMAI GTCTC 4 cut(s) 566, 763, 1113, 1133
BstMWI GCNNNNNNNGC 2 cut(s) 261, 347
BstNI CCWGG 2 cut(s) 93, 1260
BstNSI RCATGY 3 cut(s) 672, 1825, 1881
BstPAI GACNNNNGTC 1 cut(s) 41
BstPI GGTNACC 1 cut(s) 257
BstSCI CCNGG 3 cut(s) 91, 697, 1258
BstSLI GKGCMC 1 cut(s) 1009
BstUI CGCG 2 cut(s) 108, 255
BstV2I GAAGAC 5 cut(s) 37, 1308, 1437, 1448, 1692
BstX2I RGATCY 6 cut(s) 12, 565, 828, 1056, 1803, 1899
BstYI RGATCY 6 cut(s) 12, 565, 828, 1056, 1803, 1899
BstZ17I GTATAC 1 cut(s) 280
BtgI CCRYGG 2 cut(s) 253, 1140
BtsCI GGATG 2 cut(s) 445, 980
BtsI GCAGTG 2 cut(s) 76, 1687
BtsIMutI CAGTG 9 cut(s) 76, 117, 232, 705, 832, 1383, 1500, 1687, 1693
BtuMI TCGCGA 1 cut(s) 108
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 3 cut(s) 1476, 1723, 1879
CaiI CAGNNNCTG 1 cut(s) 419
CciI TCATGA 4 cut(s) 625, 813, 897, 1131
Cfr42I CCGCGG 1 cut(s) 256
Csp6I GTAC 8 cut(s) 24, 204, 389, 556, 805, 1198, 1215, 1819
CviQI GTAC 8 cut(s) 24, 204, 389, 556, 805, 1198, 1215, 1819
DdeI CTNAG 4 cut(s) 70, 425, 570, 657
Eam1104I CTCTTC 2 cut(s) 875, 1220
EarI CTCTTC 2 cut(s) 875, 1220
Eco130I CCWWGG 1 cut(s) 1140
Eco31I GGTCTC 2 cut(s) 566, 1133
Eco32I GATATC 1 cut(s) 922
Eco91I GGTNACC 1 cut(s) 257
EcoO65I GGTNACC 1 cut(s) 257
EcoRI GAATTC 2 cut(s) 271, 1263
EcoRII CCWGG 2 cut(s) 91, 1258
EcoRV GATATC 1 cut(s) 922
EcoT14I CCWWGG 1 cut(s) 1140
ErhI CCWWGG 1 cut(s) 1140
FalI AAGNNNNNCTT 2 cut(s) 1232, 1264
FaqI GGGAC 4 cut(s) 432, 812, 1057, 1351
FauI CCCGC 1 cut(s) 429
FauNDI CATATG 3 cut(s) 178, 751, 1837
FbaI TGATCA 3 cut(s) 823, 894, 1632
FblI GTMKAC 1 cut(s) 279
FokI GGATG 2 cut(s) 452, 987
FspBI CTAG 1 cut(s) 1793
GsaI CCCAGC 2 cut(s) 504, 1100
GsuI CTGGAG 1 cut(s) 141
HapII CCGG 1 cut(s) 698
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HindIII AAGCTT 2 cut(s) 332, 980
HinfI GANTC 3 cut(s) 344, 483, 578
HpaII CCGG 1 cut(s) 698
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 4 cut(s) 145, 280, 724, 1036
Hpy188I TCNGA 7 cut(s) 428, 548, 828, 1056, 1370, 1632, 1896
Hpy8I GTNNAC 4 cut(s) 145, 280, 724, 1036
HpyAV CCTTC 7 cut(s) 98, 140, 419, 1122, 1637, 1751, 1768
HpyCH4III ACNGT 3 cut(s) 227, 617, 709
HpyCH4IV ACGT 2 cut(s) 803, 1038
HpyCH4V TGCA 5 cut(s) 230, 350, 672, 1091, 1680
HpyF10VI GCNNNNNNNGC 2 cut(s) 261, 347
HpyF3I CTNAG 4 cut(s) 70, 425, 570, 657
HpySE526I ACGT 2 cut(s) 803, 1038
Ksp22I TGATCA 3 cut(s) 823, 894, 1632
KspI CCGCGG 1 cut(s) 256
LmnI GCTCC 4 cut(s) 60, 106, 301, 1532
LweI GCATC 2 cut(s) 328, 797
MaeI CTAG 1 cut(s) 1793
MaeII ACGT 2 cut(s) 803, 1038
MaeIII GTNAC 4 cut(s) 257, 604, 1075, 1178
MfeI CAATTG 1 cut(s) 938
MflI RGATCY 6 cut(s) 12, 565, 828, 1056, 1803, 1899
MhlI GDGCHC 2 cut(s) 57, 1009
MmeI TCCRAC 3 cut(s) 460, 1140, 1758
MroXI GAANNNNTTC 1 cut(s) 1583
MseI TTAA 5 cut(s) 194, 360, 765, 987, 1238
MspA1I CMGCKG 2 cut(s) 255, 1721
MspI CCGG 1 cut(s) 698
MspR9I CCNGG 3 cut(s) 93, 699, 1260
MunI CAATTG 1 cut(s) 938
Mva1269I GAATGC 2 cut(s) 1297, 1518
MvaI CCWGG 2 cut(s) 93, 1260
MvnI CGCG 2 cut(s) 108, 255
MwoI GCNNNNNNNGC 2 cut(s) 261, 347
NciI CCSGG 1 cut(s) 699
NcoI CCATGG 1 cut(s) 1140
NdeI CATATG 3 cut(s) 178, 751, 1837
NlaIV GGNNCC 4 cut(s) 1008, 1467, 1805, 1861
NmeAIII GCCGAG 2 cut(s) 1166, 1438
NmuCI GTSAC 2 cut(s) 257, 604
NruI TCGCGA 1 cut(s) 108
NspI RCATGY 3 cut(s) 672, 1825, 1881
PaeI GCATGC 1 cut(s) 1881
PagI TCATGA 4 cut(s) 625, 813, 897, 1131
PaqCI CACCTGC 1 cut(s) 1453
PctI GAATGC 2 cut(s) 1297, 1518
PdmI GAANNNNTTC 1 cut(s) 1583
PfeI GAWTC 3 cut(s) 344, 483, 578
PfoI TCCNGGA 1 cut(s) 1258
Ppu21I YACGTR 1 cut(s) 804
PshAI GACNNNNGTC 1 cut(s) 41
PsiI TTATAA 1 cut(s) 848
Psp6I CCWGG 2 cut(s) 91, 1258
PspEI GGTNACC 1 cut(s) 257
PspFI CCCAGC 2 cut(s) 500, 1096
PspGI CCWGG 2 cut(s) 91, 1258
PspN4I GGNNCC 4 cut(s) 1008, 1467, 1805, 1861
PsrI GAACNNNNNNTAC 2 cut(s) 1190, 1222
PstNI CAGNNNCTG 1 cut(s) 419
PsuI RGATCY 6 cut(s) 12, 565, 828, 1056, 1803, 1899
RruI TCGCGA 1 cut(s) 108
RsaI GTAC 8 cut(s) 25, 205, 390, 557, 806, 1199, 1216, 1820
RsaNI GTAC 8 cut(s) 24, 204, 389, 556, 805, 1198, 1215, 1819
SacII CCGCGG 1 cut(s) 256
SaqAI TTAA 5 cut(s) 194, 360, 765, 987, 1238
ScrFI CCNGG 3 cut(s) 93, 699, 1260
SduI GDGCHC 2 cut(s) 57, 1009
SfaNI GCATC 2 cut(s) 328, 797
Sfr303I CCGCGG 1 cut(s) 256
SgrBI CCGCGG 1 cut(s) 256
SmlI CTYRAG 2 cut(s) 538, 960
SmoI CTYRAG 2 cut(s) 538, 960
SphI GCATGC 1 cut(s) 1881
SsiI CCGC 6 cut(s) 253, 255, 262, 436, 1643, 1719
SspI AATATT 1 cut(s) 200
SspMI CTAG 1 cut(s) 1793
StyD4I CCNGG 3 cut(s) 91, 697, 1258
StyI CCWWGG 1 cut(s) 1140
TaaI ACNGT 3 cut(s) 227, 617, 709
TaiI ACGT 2 cut(s) 806, 1041
TaqI TCGA 3 cut(s) 325, 385, 586
TaqII GACCGA 1 cut(s) 590
TatI WGTACW 2 cut(s) 388, 1197
TfiI GAWTC 3 cut(s) 344, 483, 578
Tru1I TTAA 5 cut(s) 194, 360, 765, 987, 1238
Tru9I TTAA 5 cut(s) 194, 360, 765, 987, 1238
TscAI CASTG 9 cut(s) 83, 124, 232, 712, 839, 1383, 1500, 1687, 1700
TseFI GTSAC 2 cut(s) 257, 604
Tsp45I GTSAC 2 cut(s) 257, 604
TspDTI ATGAA 8 cut(s) 477, 514, 642, 830, 1150, 1502, 1531, 1824
TspRI CASTG 9 cut(s) 83, 124, 232, 712, 839, 1383, 1500, 1687, 1700
XapI RAATTY 5 cut(s) 271, 355, 850, 1263, 1452
XceI RCATGY 3 cut(s) 672, 1825, 1881
XcmI CCANNNNNNNNNTGG 1 cut(s) 1476
XmiI GTMKAC 1 cut(s) 279
XmnI GAANNNNTTC 1 cut(s) 1583
XspI CTAG 1 cut(s) 1793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.