pycom09g11010
ERF Family

Transmembrane 9 superfamily member

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
9162366 .. 9166776
4411 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g11010.1

Sequence Viewer

Length: 2028 bp
ATGCCATTTTATCCCTGCGGCAGCCTCTGTAAGCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAATCCAAGTTGAAGAACCAGAAGAAGATGGGTAGGAGGATCTCCGCCCCTACAACCACCAAGGGGACGACCCTTATCTTCACCGTGCTCCTCCTTATCTCCTCGTCCCACTGCTTCTACCTCCCGGGCGTTGCTCCTCGCGATTTCCACACTGGAGATGAACTTTCTATCAAAGTGAACAAATTGTCATCTACAAAGACGCAACTCCCGTATGACTATTACTTCTTAAAATATTGTACTCCCCCACAGATTATAAACAGTGCAGAAAATCTGGGGGAGGTTCTCCGTGGTGATCGCATTGAGAATTCTGTGTACACTTTCAAAATGAGGGAGGAGCAATCCTGTGTAGTAGCTTGTCGACAAAATCTTAACGCTGAATCTGCAAAAAATTTTAAGGAAAAAATTGAAGATAAGTATCGAGTACAAATGATTTTGGATAACCTTCCAGTTGCTGTTCTCAGACAGAGGCGGGATGGAAGCCCCTCAACAACTTATGAACATGGATTCGGTGTTGGATTCAAAGGAAATTATGCTGGGAATAAAGAGGAGAAATATTTTATTAACAACCACTTGAGCTTCCGAGTTATGTATCACAAAGATCCTGAGACTGATTCTGCTCGAATTGTTGGGTTTGAGGTTACTCCAAACAGTATCAATCACGAATATAAGGAGTGGAATGGTAATAATACTCAGTTGGTAACATGCAATAAAGACACGAAAAATCTACCACCGGGAAGCAGTGTTCCCCAAGAAGTTGACAAAGATAAGGAGATTGTATTTACATATGATGTCTCCTTTAAGGAAAGTGAGATCAAGTGGGCATCTCGGTGGGACACGTACCTTCTCATGAATGACGATCAGATCCACTGGTTTTCAATTATAAATTCATTGATGATAGTCCTCTTTTTATCTGGTATGGTGGCTATGATCATGATGAGAACTCTATACAGAGATATTGCCAACTATAATCAGCTGGACAGCCAAGATGAGGCTCAAGAAGAAACTGGATGGAAACTTGTTAATGGAGATGTTTTTAGGGCACCAATCAATTCCAATTTACTTTGCGTCTACGTAGGGACAGGGGTTCAGATCCTTGCAATGACACTCGTAACCATGATATTTGCATTGCTGGGCTTCTTGTCTCCTTCCAACCGAGGGGGTCTCATGACTGCCATGGTTCTCTTGTGGGTTTTCATGGGCTTATTTGCTGGTTACTCCTCTGCACGATTGTACAAAATGTTCAAGGGTACAGAGTGGAAGAGGAATACCTTAAAGACTGCCTTTATGTTTCCAGGAATTCTTTTTGCCGTCTTCTTTGTGCTGAATGCTCTAATTTGGGGGGAGAAGTCGTCTGGGGCTGTGCCTTTTGGGACAATGATTGCTTTGGTTTGCCTGTGGTTTGGAATATCAGTGCCCTTGGTCTTTGTTGGTAGTTATTTGGGGTTCAAAAAGCCACCTGTTGAAGACCCTGTAAAGACTAACAAAATTCCCCGGCAGGTGCCAGAGCAGGCATGGTATATGAAACCAGTATTCTCTATACTGATTGGAGGCATTCTTCCATTTGGAGCTGTTTTCATCGAGCTGTTCTTTATCTTGACATCAATTTGGCTGAACCAGTTCTATTACATCTTCGGCTTCCTTTTCATCGTGTTTGTTATCCTTCTGATCACCTGTGCGGAGATAACAATCGTGCTATGCTACTTCCAATTATGCAGTGAAGACTACCACTGGTGGTGGAGATCTTACCTGACCGCTGGCTCATCTGCTCTTTACCTTCTCCTCTACTCTGCCTTCTACTTCTTTACCAAGTTGGAGATTACAAAGTTTGTTTCGGGCATCCTTTACTTCGGGTACATGCTAATTGTTTCATATGCTTTCTTCGTCCTGACCGGAACCATTGGTTTCTACGCATGTTTCTGGTTTGTTCGAAAGATCTACTCCTCTGTGAAGATTGACTGA

Protein Analysis

676

Amino Acids

77.23

Weight (kDa)

8.7

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EMP70 PF02990 93 - 632 1.8e-225 Endomembrane protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 323, 950
AarI CACCTGC 1 cut(s) 1555
Acc36I ACCTGC 1 cut(s) 1555
AccB1I GGYRCC 2 cut(s) 1108, 1567
AccI GTMKAC 2 cut(s) 427, 1137
AccII CGCG 1 cut(s) 210
AciI CCGC 5 cut(s) 18, 114, 538, 1745, 1821
AclWI GGATC 4 cut(s) 116, 662, 925, 1153
AcsI RAATTY 5 cut(s) 373, 457, 952, 1365, 1554
AfaI GTAC 7 cut(s) 307, 383, 492, 908, 1301, 1318, 1922
AfiI CCNNNNNNNGG 3 cut(s) 132, 1057, 1224
AflIII ACRYGT 1 cut(s) 903
AgsI TTSAA 8 cut(s) 82, 391, 476, 589, 945, 1312, 1516, 1532
AjnI CCWGG 1 cut(s) 1360
AloI GAACNNNNNNTCC 2 cut(s) 795, 827
AluBI AGCT 5 cut(s) 422, 645, 1042, 1637, 1651
AluI AGCT 5 cut(s) 422, 645, 1042, 1637, 1651
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 4 cut(s) 668, 865, 1215, 1235
AlwI GGATC 4 cut(s) 116, 662, 925, 1153
AlwNI CAGNNNCTG 2 cut(s) 27, 521
Ama87I CYCGRG 1 cut(s) 193
ApeKI GCWGC 1 cut(s) 21
ApoI RAATTY 5 cut(s) 373, 457, 952, 1365, 1554
Asp700I GAANNNNTTC 1 cut(s) 1685
AsuC2I CCSGG 4 cut(s) 194, 195, 801, 1561
AsuHPI GGTGA 3 cut(s) 142, 371, 1729
AsuII TTCGAA 1 cut(s) 1996
AvaI CYCGRG 1 cut(s) 193
BaeGI GKGCMC 2 cut(s) 1111, 1485
BanI GGYRCC 2 cut(s) 1108, 1567
BbsI GAAGAC 3 cut(s) 1372, 1539, 1794
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 1 cut(s) 33
BccI CCATC 3 cut(s) 91, 536, 1071
BceAI ACGGC 1 cut(s) 1361
BciT130I CCWGG 1 cut(s) 1362
BclI TGATCA 2 cut(s) 996, 1734
BcnI CCSGG 4 cut(s) 194, 195, 801, 1561
BcoDI GTCTC 4 cut(s) 668, 865, 1215, 1235
BfuAI ACCTGC 1 cut(s) 1555
BglII AGATCT 2 cut(s) 1808, 2001
BisI GCNGC 2 cut(s) 19, 22
BlsI GCNGC 2 cut(s) 20, 23
Bme1390I CCNGG 5 cut(s) 194, 195, 801, 1362, 1561
BmeT110I CYCGRG 1 cut(s) 193
BmiI GGNNCC 3 cut(s) 1110, 1569, 1963
BmrFI CCNGG 5 cut(s) 194, 195, 801, 1362, 1561
BmsI GCATC 2 cut(s) 899, 1914
BpiI GAAGAC 3 cut(s) 1372, 1539, 1794
BplI GAGNNNNNCTC 2 cut(s) 1215, 1247
BpmI CTGGAG 1 cut(s) 243
Bpu14I TTCGAA 1 cut(s) 1996
BpuEI CTTGAG 2 cut(s) 661, 1047
BpuMI CCSGG 4 cut(s) 194, 195, 801, 1561
BsaAI YACGTR 2 cut(s) 906, 1141
BsaBI GATNNNNATC 2 cut(s) 483, 1754
BsaI GGTCTC 1 cut(s) 1235
BsaJI CCNNGG 7 cut(s) 129, 193, 355, 1222, 1242, 1485, 1559
BsaWI WCCGGW 1 cut(s) 1958
BsaXI ACNNNNNCTCC 2 cut(s) 1403, 1433
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 1057, 1224
Bse1I ACTGG 7 cut(s) 226, 515, 941, 1078, 1595, 1684, 1802
Bse3DI GCAATG 2 cut(s) 1173, 1193
Bse8I GATNNNNATC 2 cut(s) 483, 1754
BseBI CCWGG 1 cut(s) 1362
BseDI CCNNGG 7 cut(s) 129, 193, 355, 1222, 1242, 1485, 1559
BseGI GGATG 3 cut(s) 547, 1082, 1905
BseJI GATNNNNATC 2 cut(s) 483, 1754
BseLI CCNNNNNNNGG 3 cut(s) 132, 1057, 1224
BseMI GCAATG 2 cut(s) 1173, 1193
BseMII CTCAG 3 cut(s) 541, 663, 773
BseNI ACTGG 7 cut(s) 226, 515, 941, 1078, 1595, 1684, 1802
BseRI GAGGAG 8 cut(s) 149, 160, 195, 416, 629, 1276, 1838, 1999
BseSI GKGCMC 2 cut(s) 1111, 1485
BseXI GCAGC 1 cut(s) 33
BseYI CCCAGC 2 cut(s) 602, 1198
BsgI GTGCAG 2 cut(s) 351, 1275
Bsh1236I CGCG 1 cut(s) 210
BshNI GGYRCC 2 cut(s) 1108, 1567
BsiHKAI GWGCWC 1 cut(s) 159
BsiHKCI CYCGRG 1 cut(s) 193
BsiSI CCGG 4 cut(s) 194, 800, 1561, 1959
BslFI GGGAC 5 cut(s) 148, 160, 914, 1159, 1453
BslI CCNNNNNNNGG 3 cut(s) 132, 1057, 1224
BsmAI GTCTC 4 cut(s) 668, 865, 1215, 1235
BsmFI GGGAC 5 cut(s) 148, 160, 914, 1159, 1453
BsmI GAATGC 2 cut(s) 1399, 1620
Bso31I GGTCTC 1 cut(s) 1235
BsoBI CYCGRG 1 cut(s) 193
Bsp119I TTCGAA 1 cut(s) 1996
Bsp1286I GDGCHC 3 cut(s) 159, 1111, 1485
Bsp1407I TGTACA 2 cut(s) 381, 1299
Bsp19I CCATGG 1 cut(s) 1242
Bsp68I TCGCGA 1 cut(s) 210
BspACI CCGC 5 cut(s) 18, 114, 538, 1745, 1821
BspCNI CTCAG 3 cut(s) 540, 664, 772
BspFNI CGCG 1 cut(s) 210
BspHI TCATGA 3 cut(s) 915, 999, 1233
BspLI GGNNCC 3 cut(s) 1110, 1569, 1963
BspMI ACCTGC 1 cut(s) 1555
BspPI GGATC 4 cut(s) 116, 662, 925, 1153
BspT104I TTCGAA 1 cut(s) 1996
BspT107I GGYRCC 2 cut(s) 1108, 1567
BspTNI GGTCTC 1 cut(s) 1235
BsrDI GCAATG 2 cut(s) 1173, 1193
BsrGI TGTACA 2 cut(s) 381, 1299
BsrI ACTGG 7 cut(s) 226, 515, 941, 1078, 1595, 1684, 1802
BssECI CCNNGG 7 cut(s) 129, 193, 355, 1222, 1242, 1485, 1559
BssT1I CCWWGG 3 cut(s) 129, 1242, 1485
Bst2UI CCWGG 1 cut(s) 1362
Bst4CI ACNGT 3 cut(s) 154, 329, 719
Bst6I CTCTTC 1 cut(s) 1322
BstAUI TGTACA 2 cut(s) 381, 1299
BstBAI YACGTR 2 cut(s) 906, 1141
BstBI TTCGAA 1 cut(s) 1996
BstC8I GCNNGC 2 cut(s) 1578, 1825
BstDEI CTNAG 3 cut(s) 527, 672, 759
BstDSI CCRYGG 2 cut(s) 355, 1242
BstF5I GGATG 3 cut(s) 547, 1082, 1905
BstFNI CGCG 1 cut(s) 210
BstMAI GTCTC 4 cut(s) 668, 865, 1215, 1235
BstMWI GCNNNNNNNGC 1 cut(s) 449
BstNI CCWGG 1 cut(s) 1362
BstNSI RCATGY 3 cut(s) 774, 1927, 1983
BstSCI CCNGG 5 cut(s) 192, 193, 799, 1360, 1559
BstSLI GKGCMC 2 cut(s) 1111, 1485
BstSNI TACGTA 1 cut(s) 1141
BstUI CGCG 1 cut(s) 210
BstV1I GCAGC 1 cut(s) 33
BstV2I GAAGAC 3 cut(s) 1372, 1539, 1794
BstX2I RGATCY 6 cut(s) 108, 667, 930, 1158, 1808, 2001
BstYI RGATCY 6 cut(s) 108, 667, 930, 1158, 1808, 2001
BtgI CCRYGG 2 cut(s) 355, 1242
BtsCI GGATG 3 cut(s) 547, 1082, 1905
BtsI GCAGTG 3 cut(s) 178, 814, 1789
BtsIMutI CAGTG 8 cut(s) 178, 219, 334, 814, 934, 1485, 1789, 1795
BtuMI TCGCGA 1 cut(s) 210
BveI ACCTGC 1 cut(s) 1555
Cac8I GCNNGC 2 cut(s) 1578, 1825
CaiI CAGNNNCTG 2 cut(s) 27, 521
CciI TCATGA 3 cut(s) 915, 999, 1233
Cfr9I CCCGGG 1 cut(s) 193
CseI GACGC 2 cut(s) 277, 1123
Csp6I GTAC 7 cut(s) 306, 382, 491, 907, 1300, 1317, 1921
CviQI GTAC 7 cut(s) 306, 382, 491, 907, 1300, 1317, 1921
DdeI CTNAG 3 cut(s) 527, 672, 759
Eam1104I CTCTTC 1 cut(s) 1322
EarI CTCTTC 1 cut(s) 1322
EciI GGCGGA 1 cut(s) 103
Eco105I TACGTA 1 cut(s) 1141
Eco130I CCWWGG 3 cut(s) 129, 1242, 1485
Eco31I GGTCTC 1 cut(s) 1235
Eco88I CYCGRG 1 cut(s) 193
EcoRI GAATTC 2 cut(s) 373, 1365
EcoRII CCWGG 1 cut(s) 1360
EcoT14I CCWWGG 3 cut(s) 129, 1242, 1485
ErhI CCWWGG 3 cut(s) 129, 1242, 1485
FalI AAGNNNNNCTT 2 cut(s) 1334, 1366
FaqI GGGAC 5 cut(s) 148, 160, 914, 1159, 1453
FauI CCCGC 1 cut(s) 531
FauNDI CATATG 2 cut(s) 853, 1939
FbaI TGATCA 2 cut(s) 996, 1734
FblI GTMKAC 2 cut(s) 427, 1137
Fnu4HI GCNGC 2 cut(s) 19, 22
FokI GGATG 3 cut(s) 554, 1089, 1892
Fsp4HI GCNGC 2 cut(s) 19, 22
GluI GCNGC 2 cut(s) 19, 22
GsaI CCCAGC 2 cut(s) 606, 1202
GsuI CTGGAG 1 cut(s) 243
HapII CCGG 4 cut(s) 194, 800, 1561, 1959
HgaI GACGC 2 cut(s) 277, 1123
HincII GTYRAC 2 cut(s) 428, 826
HindII GTYRAC 2 cut(s) 428, 826
HinfI GANTC 5 cut(s) 71, 446, 573, 585, 680
HpaII CCGG 4 cut(s) 194, 800, 1561, 1959
HphI GGTGA 3 cut(s) 142, 371, 1729
Hpy166II GTNNAC 6 cut(s) 247, 382, 384, 428, 826, 1138
Hpy188I TCNGA 5 cut(s) 530, 650, 930, 1158, 1734
Hpy8I GTNNAC 6 cut(s) 247, 382, 384, 428, 826, 1138
HpyAV CCTTC 6 cut(s) 521, 920, 1224, 1739, 1853, 1870
HpyCH4III ACNGT 3 cut(s) 154, 329, 719
HpyCH4IV ACGT 2 cut(s) 905, 1140
HpyCH4V TGCA 7 cut(s) 332, 452, 774, 1166, 1193, 1292, 1782
HpyF10VI GCNNNNNNNGC 1 cut(s) 449
HpyF3I CTNAG 3 cut(s) 527, 672, 759
HpySE526I ACGT 2 cut(s) 905, 1140
Ksp22I TGATCA 2 cut(s) 996, 1734
LmnI GCTCC 4 cut(s) 162, 208, 403, 1634
Lsp1109I GCAGC 1 cut(s) 33
LweI GCATC 2 cut(s) 899, 1914
MaeII ACGT 2 cut(s) 905, 1140
MaeIII GTNAC 4 cut(s) 706, 766, 1177, 1280
MflI RGATCY 6 cut(s) 108, 667, 930, 1158, 1808, 2001
MhlI GDGCHC 3 cut(s) 159, 1111, 1485
MmeI TCCRAC 3 cut(s) 562, 1242, 1860
MroXI GAANNNNTTC 1 cut(s) 1685
MseI TTAA 7 cut(s) 296, 438, 462, 630, 867, 1089, 1340
MslI CAYNNNNRTG 1 cut(s) 895
MspA1I CMGCKG 2 cut(s) 1042, 1823
MspI CCGG 4 cut(s) 194, 800, 1561, 1959
MspR9I CCNGG 5 cut(s) 194, 195, 801, 1362, 1561
Mva1269I GAATGC 2 cut(s) 1399, 1620
MvaI CCWGG 1 cut(s) 1362
MvnI CGCG 1 cut(s) 210
MwoI GCNNNNNNNGC 1 cut(s) 449
NciI CCSGG 4 cut(s) 194, 195, 801, 1561
NcoI CCATGG 1 cut(s) 1242
NdeI CATATG 2 cut(s) 853, 1939
NlaIV GGNNCC 3 cut(s) 1110, 1569, 1963
NruI TCGCGA 1 cut(s) 210
NspI RCATGY 3 cut(s) 774, 1927, 1983
NspV TTCGAA 1 cut(s) 1996
PagI TCATGA 3 cut(s) 915, 999, 1233
PaqCI CACCTGC 1 cut(s) 1555
PcsI WCGNNNNNNNCGW 1 cut(s) 275
PctI GAATGC 2 cut(s) 1399, 1620
PdmI GAANNNNTTC 1 cut(s) 1685
PfeI GAWTC 5 cut(s) 71, 446, 573, 585, 680
PfoI TCCNGGA 1 cut(s) 1360
PkrI GCNGC 2 cut(s) 20, 23
Ppu21I YACGTR 2 cut(s) 906, 1141
PsiI TTATAA 2 cut(s) 323, 950
Psp6I CCWGG 1 cut(s) 1360
PspFI CCCAGC 2 cut(s) 602, 1198
PspGI CCWGG 1 cut(s) 1360
PspN4I GGNNCC 3 cut(s) 1110, 1569, 1963
PsrI GAACNNNNNNTAC 2 cut(s) 1292, 1324
PstNI CAGNNNCTG 2 cut(s) 27, 521
PsuI RGATCY 6 cut(s) 108, 667, 930, 1158, 1808, 2001
PvuII CAGCTG 1 cut(s) 1042
RruI TCGCGA 1 cut(s) 210
RsaI GTAC 7 cut(s) 307, 383, 492, 908, 1301, 1318, 1922
RsaNI GTAC 7 cut(s) 306, 382, 491, 907, 1300, 1317, 1921
RseI CAYNNNNRTG 1 cut(s) 895
SalI GTCGAC 1 cut(s) 426
SaqAI TTAA 7 cut(s) 296, 438, 462, 630, 867, 1089, 1340
SatI GCNGC 2 cut(s) 19, 22
ScrFI CCNGG 5 cut(s) 194, 195, 801, 1362, 1561
SduI GDGCHC 3 cut(s) 159, 1111, 1485
SfaNI GCATC 2 cut(s) 899, 1914
SfuI TTCGAA 1 cut(s) 1996
SmaI CCCGGG 1 cut(s) 195
SmiMI CAYNNNNRTG 1 cut(s) 895
SmlI CTYRAG 2 cut(s) 640, 1062
SmoI CTYRAG 2 cut(s) 640, 1062
SnaBI TACGTA 1 cut(s) 1141
SsiI CCGC 5 cut(s) 18, 114, 538, 1745, 1821
SspI AATATT 2 cut(s) 302, 623
StyD4I CCNGG 5 cut(s) 192, 193, 799, 1360, 1559
StyI CCWWGG 3 cut(s) 129, 1242, 1485
TaaI ACNGT 3 cut(s) 154, 329, 719
TaiI ACGT 2 cut(s) 908, 1143
TaqI TCGA 6 cut(s) 69, 427, 487, 688, 1647, 1996
TatI WGTACW 4 cut(s) 305, 381, 490, 1299
TauI GCSGC 1 cut(s) 21
TfiI GAWTC 5 cut(s) 71, 446, 573, 585, 680
Tru1I TTAA 7 cut(s) 296, 438, 462, 630, 867, 1089, 1340
Tru9I TTAA 7 cut(s) 296, 438, 462, 630, 867, 1089, 1340
TscAI CASTG 8 cut(s) 185, 226, 334, 814, 941, 1485, 1789, 1802
TseI GCWGC 1 cut(s) 21
TspDTI ATGAA 9 cut(s) 243, 579, 932, 945, 1252, 1604, 1633, 1702, 1926
TspGWI ACGGA 1 cut(s) 344
TspMI CCCGGG 1 cut(s) 193
TspRI CASTG 8 cut(s) 185, 226, 334, 814, 941, 1485, 1789, 1802
XapI RAATTY 5 cut(s) 373, 457, 952, 1365, 1554
XceI RCATGY 3 cut(s) 774, 1927, 1983
XcmI CCANNNNNNNNNTGG 1 cut(s) 1578
XmaI CCCGGG 1 cut(s) 193
XmiI GTMKAC 2 cut(s) 427, 1137
XmnI GAANNNNTTC 1 cut(s) 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.