No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.3G065700_v2.0.a1 Prupe.3G065900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0319151 RchiOBHm_Chr1g0374451 RchiOBHm_Chr2g0101461 RchiOBHm_Chr6g0263901 RchiOBHm_Chr6g0304581 |
| rosa_multiflora | Rmu_sc0004670.1_g000026 Rmu_sc0012551.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00319370 Rroxscaffold_6G00425380 |
| rosa_rugosa | Rorug02G0653500 Rorug02G0653500 Rorug02G0653500 |
| rosa_samantha | Rh2CG153100 Rh3CG346600 Rh4BG328800 Rh5DG226000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 191 |
| AatII | GACGTC | 1 cut(s) | 195 |
| AccII | CGCG | 1 cut(s) | 215 |
| AclWI | GGATC | 1 cut(s) | 52 |
| AcsI | RAATTY | 1 cut(s) | 223 |
| AcyI | GRCGYC | 1 cut(s) | 192 |
| AfaI | GTAC | 1 cut(s) | 105 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 2 cut(s) | 21, 202 |
| AluBI | AGCT | 1 cut(s) | 98 |
| AluI | AGCT | 1 cut(s) | 98 |
| AlwI | GGATC | 1 cut(s) | 52 |
| ApoI | RAATTY | 1 cut(s) | 223 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 135, 227 |
| BbsI | GAAGAC | 1 cut(s) | 187 |
| BccI | CCATC | 2 cut(s) | 34, 121 |
| BfaI | CTAG | 1 cut(s) | 241 |
| BmiI | GGNNCC | 1 cut(s) | 152 |
| BpiI | GAAGAC | 1 cut(s) | 187 |
| BsaAI | YACGTR | 1 cut(s) | 147 |
| BsaHI | GRCGYC | 1 cut(s) | 192 |
| Bsh1236I | CGCG | 1 cut(s) | 215 |
| BslFI | GGGAC | 2 cut(s) | 48, 197 |
| BsmFI | GGGAC | 2 cut(s) | 48, 197 |
| Bsp143I | GATC | 1 cut(s) | 44 |
| BspFNI | CGCG | 1 cut(s) | 215 |
| BspLI | GGNNCC | 1 cut(s) | 152 |
| BspPI | GGATC | 1 cut(s) | 52 |
| BssMI | GATC | 1 cut(s) | 44 |
| BssNI | GRCGYC | 1 cut(s) | 192 |
| Bst6I | CTCTTC | 2 cut(s) | 126, 153 |
| BstACI | GRCGYC | 1 cut(s) | 192 |
| BstBAI | YACGTR | 1 cut(s) | 147 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstFNI | CGCG | 1 cut(s) | 215 |
| BstKTI | GATC | 1 cut(s) | 47 |
| BstMBI | GATC | 1 cut(s) | 44 |
| BstUI | CGCG | 1 cut(s) | 215 |
| BstV2I | GAAGAC | 1 cut(s) | 187 |
| CseI | GACGC | 1 cut(s) | 221 |
| Csp6I | GTAC | 1 cut(s) | 104 |
| CviAII | CATG | 2 cut(s) | 155, 187 |
| CviJI | RGCY | 2 cut(s) | 98, 153 |
| CviKI_1 | RGCY | 2 cut(s) | 98, 153 |
| CviQI | GTAC | 1 cut(s) | 104 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 1 cut(s) | 46 |
| DpnII | GATC | 1 cut(s) | 44 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 191 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 191 |
| Eam1104I | CTCTTC | 2 cut(s) | 126, 153 |
| EarI | CTCTTC | 2 cut(s) | 126, 153 |
| FaeI | CATG | 2 cut(s) | 158, 190 |
| FaiI | YATR | 9 cut(s) | 15, 65, 67, 75, 85, 156, 167, 188, 210 |
| FaqI | GGGAC | 2 cut(s) | 48, 197 |
| FatI | CATG | 2 cut(s) | 154, 186 |
| FspBI | CTAG | 1 cut(s) | 241 |
| HgaI | GACGC | 1 cut(s) | 221 |
| Hin1I | GRCGYC | 1 cut(s) | 192 |
| Hin1II | CATG | 2 cut(s) | 158, 190 |
| HinfI | GANTC | 1 cut(s) | 136 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| HpyAV | CCTTC | 1 cut(s) | 61 |
| HpyCH4IV | ACGT | 2 cut(s) | 146, 192 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| HpySE526I | ACGT | 2 cut(s) | 146, 192 |
| Hsp92I | GRCGYC | 1 cut(s) | 192 |
| Hsp92II | CATG | 2 cut(s) | 158, 190 |
| Kzo9I | GATC | 1 cut(s) | 44 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| LpnPI | CCDG | 1 cut(s) | 11 |
| MaeI | CTAG | 1 cut(s) | 241 |
| MaeII | ACGT | 2 cut(s) | 146, 192 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 46 |
| MboI | GATC | 1 cut(s) | 44 |
| MboII | GAAGA | 6 cut(s) | 143, 170, 187, 190, 229, 232 |
| MluCI | AATT | 2 cut(s) | 114, 223 |
| MluI | ACGCGT | 1 cut(s) | 213 |
| MroXI | GAANNNNTTC | 2 cut(s) | 135, 227 |
| MseI | TTAA | 1 cut(s) | 57 |
| MvnI | CGCG | 1 cut(s) | 215 |
| NdeII | GATC | 1 cut(s) | 44 |
| NlaIII | CATG | 2 cut(s) | 158, 190 |
| NlaIV | GGNNCC | 1 cut(s) | 152 |
| PdmI | GAANNNNTTC | 2 cut(s) | 135, 227 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| Ppu21I | YACGTR | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 1 cut(s) | 152 |
| RsaI | GTAC | 1 cut(s) | 105 |
| RsaNI | GTAC | 1 cut(s) | 104 |
| SaqAI | TTAA | 1 cut(s) | 57 |
| Sau3AI | GATC | 1 cut(s) | 44 |
| SetI | ASST | 4 cut(s) | 53, 100, 149, 195 |
| SgeI | CNNG | 8 cut(s) | 38, 159, 167, 185, 194, 199, 226, 228 |
| Sse9I | AATT | 2 cut(s) | 114, 223 |
| SspMI | CTAG | 1 cut(s) | 241 |
| TaiI | ACGT | 2 cut(s) | 149, 195 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 2 cut(s) | 114, 223 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| Tru1I | TTAA | 1 cut(s) | 57 |
| Tru9I | TTAA | 1 cut(s) | 57 |
| TspDTI | ATGAA | 2 cut(s) | 135, 171 |
| XapI | RAATTY | 1 cut(s) | 223 |
| XmnI | GAANNNNTTC | 2 cut(s) | 135, 227 |
| XspI | CTAG | 1 cut(s) | 241 |
| ZraI | GACGTC | 1 cut(s) | 193 |