Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0011954

Physical Location & Seq

Genomic Coordinates Forward (+)

5837081 .. 5843655

Gene Structure 6575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G078900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGAACTACAGGTTCCAGAACCTCCTCGGAGCTCCATACAGAGGAGGCAACGCCATAATCACCAACAACACCGAGCTAATCTCACCGGTCGGTAACAGAGTCTCGGTCACCGACCTCATCAAATCCCAAACCATAACCCTGCCCGTCCAATCTTCCTCCAACATCACCCGAATCGCCGCCTCGCCGGACGGCGTGTTTCTCCTCACCGTCGACGAGAATCACAGATGCCAATTCATCAACCTCCGGCAGCGTGTGGTGCTTCACCGCATTTCTTTCAAAAACGCCGTCAATGCCATCAAATTCAGCCCTGACGGGTCGCATATAGCGGTGGCCACTGGTAAGTTGGTTCAAATTTGGCGGTCTCCTGGTTTCAAGAAAGAGTTTTTCCCATTTGAATTGGTTAGGACTTTTGCTGATTGTGACGATAAGGTTGTGTCATTGGAATGGAGTCCGGACTCAAGTTATTTGCTTGCCGGGTCGAAAGATTTGACTGCGAGATTGTTTTGTATGAAAAAATTGAAATTTGGTGTGTTGAAGACGAAGCCATTTATGTTTTTGGGTCATAGAGATACAGTTGTGGGTGTATTTTTTGGTATTGATAAGAACACCAATAAGGTATGCAATGTTTATACAGTTACACGTGATTGTTATATTTTTAGTTGGGGTTTGAGTGGCAATGATGGTGAGTTTGATGGAATGGATGTTACGGAGCCACCCTCTCCGGGTACACCAGATAGGGATGGTGATGGTACAGTGGAAGGTGTTGGTAGTGGTGATATTAAGAAGAGGAAGGGGTATGAGGGCAGAGGTGGTAACTTGGATGAAGAAGGTGGGTATTTGCTAAACAGGAAATGGGAGTTGTTGAGGAAGGACAATTTTATGCAGGCCCAGGCGAAGTTGACAGCGTGTGATTATCATAGGGGACTTAATATGTTGGTTGTGGGGTTCTCAAATGGTGTATTTGGGTTGTATCAAATGCCTGATTTTGTGTGCTTTCACTTGTTGTCGATATCAAGAGAGAAAATTACAACCGCAGTTTTTAATGAGCTTGGAAATTGGCTGACATTTGGGTGTGCGAAACTTGGACAGTTGCTTGTGTGGGAGTGGAAGTCAGAGAGTTATATATTGAAGCAGCAAGGACATTACTTCGATGTGAATTGTCTTGCTTATTCGCCAGATTCACTACTGTTAGCCACTGGAGCAGATGATAACAAAGTCAAGGTTTGGACTGTTTCTTCAGGCTTCTGCTTTATAACGTTCTCTGAGCACACTAATGCAATCACTGCACTCCACTTTATGGCTAACAGCCATAGTCTCCTAAGTGCATCTCTGGATGGGACTGTTCGTGCATGGGATTTGTTCCGTTATCGGAATTTTAGAACATTTACCACTCCTGAATCTAGGCAATTTGTTTCATTGGCAGCAGATCAGAGTGGTGAAGTGATTTGTGCTGGAACTCTTGATTCCTTTGAGATCTTTGTTTGGTCGATGAAGACAGGCCGTTTGTTGGACATTCTTAGTGGTCATGAAGGTCCTGTTCATGGTTTGATGTTTTCTCCTACAAATGCAATTCTAGCTTCATCATCATGGGACAGAACAGTTCGGTTGTGGGATGTTTTTGATGGAAAAGGTGCAGTTGAAACATTTTCTCATACGCATGATGTTCTTACAGTGGTTTACCGCCCAGATGGAAAGCAGTTGGCTAGCAGCACATTGGATGGTCAAATTCATTTCTGGGACCCAATTGATGGTTTATTAATGTATACCATTGAGGGTCGCAGGGATATTTCTGGAGGTCGTCTTATGACAGATCGTAGATCAGCTGCCAACTCAAGTTCAGGAAAATTCTTCACAACCTTATGTTATTCAGCTGATGGGAGTTACATATTAGCTGGAGGAAGTAGCAAATATATCTGCATGTATGATGTTGCGGATCAGGTATTGCTGCGGAGGTTTCAAATAACTCACAATCTATCTTTGGACGGAGTGCTTGACTTCTTAAACTCAAAGAATATGACAGATGCTGGCCCATTGGATTTAATTGATGATGATAACAGTGATACAGAAGAAGGTATTGACAAACAAACCCGGGGAAAGTTAGGTTATGATTTACCAGGATCCATGCCTAACCGCGGAAGGCCGATTGTTAGAACAAAATCCTTGAGAATCGCCCCCACTGGTCGGAGCTTCTCAGCAGCAACAACGGAGGGGGTTCTAGTTTATTCAATTGATGATTCCTTTATCTTTGACCCAACTGATCTTGACATAGATGTCACACCCGAGGCAGTTGATGCAGCACTCAATGAAGACCAATTGAGCAAAGCTTTGATCCTTAGTCTACGATTAAATGAAGACAGTCTAATTAAAAAATGTATTTTCACTGTTAATCCAATAGACATCCCTGCTGTCGCCGCATCAATCCCTTACAGATATTTGCAAAGGTTAATTGAGGCATTTGCAGATCTTTTAGAGAGTTGCCCACATTTGGAGTTCATACTTCGGTGGTGTCAGGAGCTCTGCAAAGCTCATGGTAACTCTATTCAACAAAATTTTCGGCAGCTGCTTCCTGCTTTAAAATCCTTGCAGAAGGCAATAACCAGAACACATCGGGATTTGGCAGATACATGTTCTTCCAATGAATATATGCTTCGATACTTATGTTCAGCAAGCTCAGGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000151 GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009743 GO:0009744 GO:0009987 GO:0010033 GO:0010119 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032501 GO:0032502 GO:0032991 GO:0034285 GO:0034388 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042221 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065003 GO:0065007 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901700 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

894

Amino Acids

99.4

Weight (kDa)

6.13

Isoelectric Point (pI)

33.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011954)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15440 AT1G15440
fragaria_vesca	FvH4_6g30400 FvH4_6g30400
malus_domestica	MD09G1221400.v1.1 MD17G1203900.v1.1
prunus_persica	Prupe.3G078900_v2.0.a1
pyrus_communis	pycom1094g00080 pycom17g20750
rosa_chinensis	RchiOBHm_Chr2g0136751
rosa_laevigata	RLG00000019569
rosa_multiflora	Rmu_sc0001299.1_g000021
rosa_roxburghii	Rroxscaffold_2G00108100
rosa_rugosa	Rorug02G0332800
rosa_samantha	Rh2AG383600 Rh2BG390300 Rh2CG370100 Rh2DG406900
rosa_wichuraiana	Rw2G031370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1253
AasI	GACNNNNNNGTC	1 cut(s)	2270
AccB7I	CCANNNNNTGG	2 cut(s)	1297, 1748
AccI	GTMKAC	3 cut(s)	210, 1763, 2338
AccII	CGCG	1 cut(s)	2133
AccIII	TCCGGA	1 cut(s)	451
AclI	AACGTT	1 cut(s)	1256
AclWI	GGATC	4 cut(s)	1941, 2112, 2125, 2323
AcoI	YGGCCR	1 cut(s)	330
AcsI	RAATTY	7 cut(s)	299, 351, 521, 1372, 1725, 1844, 2548
AcuI	CTGAAG	1 cut(s)	1221
AcvI	CACGTG	1 cut(s)	641
AfaI	GTAC	2 cut(s)	727, 751
AfiI	CCNNNNNNNGG	9 cut(s)	41, 722, 1297, 1507, 1541, 1748, 2132, 2181, 2485
AflIII	ACRYGT	2 cut(s)	638, 2624
AgeI	ACCGGT	1 cut(s)	85
AjnI	CCWGG	3 cut(s)	364, 888, 2113
Alw21I	GWGCWC	3 cut(s)	34, 1269, 2517
Alw26I	GTCTC	3 cut(s)	106, 366, 1319
AlwI	GGATC	4 cut(s)	1941, 2112, 2125, 2323
AlwNI	CAGNNNCTG	1 cut(s)	2024
Ama87I	CYCGRG	2 cut(s)	2088, 2279
Aor13HI	TCCGGA	1 cut(s)	451
AoxI	GGCC	5 cut(s)	330, 885, 1498, 2026, 2138
ApoI	RAATTY	7 cut(s)	299, 351, 521, 1372, 1725, 1844, 2548
ArsI	GACNNNNNNTTYG	4 cut(s)	270, 302, 1486, 1518
AseI	ATTAAT	1 cut(s)	1757
AsiGI	ACCGGT	1 cut(s)	85
AspS9I	GGNCC	4 cut(s)	886, 1532, 1738, 2027
AsuC2I	CCSGG	4 cut(s)	475, 723, 2089, 2090
AsuNHI	GCTAGC	1 cut(s)	1703
AvaI	CYCGRG	2 cut(s)	2088, 2279
AvaII	GGWCC	2 cut(s)	1532, 1738
BaeI	ACNNNNGTAYC	4 cut(s)	561, 594, 2644, 2677
BalI	TGGCCA	1 cut(s)	332
BamHI	GGATCC	1 cut(s)	2117
BanII	GRGCYC	2 cut(s)	34, 2517
BbrPI	CACGTG	1 cut(s)	641
BbsI	GAAGAC	4 cut(s)	542, 1499, 2313, 2358
Bbv12I	GWGCWC	3 cut(s)	34, 1269, 2517
BceAI	ACGGC	3 cut(s)	205, 269, 1485
BciT130I	CCWGG	3 cut(s)	366, 890, 2115
BcnI	CCSGG	4 cut(s)	475, 723, 2089, 2090
BcoDI	GTCTC	3 cut(s)	106, 366, 1319
BfaI	CTAG	4 cut(s)	1401, 1574, 1704, 2216
BfmI	CTRYAG	1 cut(s)	7
BglII	AGATCT	2 cut(s)	1473, 2461
Bme1390I	CCNGG	7 cut(s)	366, 475, 723, 890, 2089, 2090, 2115
Bme18I	GGWCC	2 cut(s)	1532, 1738
BmeT110I	CYCGRG	2 cut(s)	2088, 2279
BmgT120I	GGNCC	4 cut(s)	886, 1532, 1738, 2027
BmiI	GGNNCC	5 cut(s)	14, 711, 1739, 1740, 2119
BmrFI	CCNGG	7 cut(s)	366, 475, 723, 890, 2089, 2090, 2115
BmsI	GCATC	5 cut(s)	215, 1334, 2011, 2281, 2423
BmtI	GCTAGC	1 cut(s)	1707
BpiI	GAAGAC	4 cut(s)	542, 1499, 2313, 2358
BplI	GAGNNNNNCTC	4 cut(s)	65, 97, 701, 733
BpmI	CTGGAG	3 cut(s)	1218, 1812, 1914
Bpu10I	CCTNAGC	1 cut(s)	2671
BpuEI	CTTGAG	3 cut(s)	442, 1816, 2182
BpuMI	CCSGG	4 cut(s)	475, 723, 2089, 2090
BsaAI	YACGTR	1 cut(s)	641
BsaI	GGTCTC	1 cut(s)	366
BsaJI	CCNNGG	6 cut(s)	25, 888, 2088, 2089, 2131, 2280
BsaWI	WCCGGW	2 cut(s)	85, 451
BsaXI	ACNNNNNCTCC	2 cut(s)	1094, 1124
Bsc4I	CCNNNNNNNGG	9 cut(s)	41, 722, 1297, 1507, 1541, 1748, 2132, 2181, 2485
Bse118I	RCCGGY	1 cut(s)	85
Bse1I	ACTGG	3 cut(s)	340, 1201, 2182
Bse3DI	GCAATG	2 cut(s)	628, 682
BseAI	TCCGGA	1 cut(s)	451
BseBI	CCWGG	3 cut(s)	366, 890, 2115
BseDI	CCNNGG	6 cut(s)	25, 888, 2088, 2089, 2131, 2280
BseGI	GGATG	7 cut(s)	706, 745, 826, 1339, 1618, 1723, 2397
BseLI	CCNNNNNNNGG	9 cut(s)	41, 722, 1297, 1507, 1541, 1748, 2132, 2181, 2485
BseMI	GCAATG	2 cut(s)	628, 682
BseMII	CTCAG	2 cut(s)	1254, 2205
BseNI	ACTGG	3 cut(s)	340, 1201, 2182
BseRI	GAGGAG	3 cut(s)	14, 57, 191
BsgI	GTGCAG	2 cut(s)	1269, 1653
Bsh1236I	CGCG	1 cut(s)	2133
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	5 cut(s)	332, 887, 1500, 2028, 2140
BshTI	ACCGGT	1 cut(s)	85
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	3 cut(s)	34, 1269, 2517
BsiHKCI	CYCGRG	2 cut(s)	2088, 2279
BsiSI	CCGG	7 cut(s)	86, 185, 244, 452, 474, 722, 2089
BslFI	GGGAC	4 cut(s)	936, 1351, 1604, 1751
BslI	CCNNNNNNNGG	9 cut(s)	41, 722, 1297, 1507, 1541, 1748, 2132, 2181, 2485
BsmAI	GTCTC	3 cut(s)	106, 366, 1319
BsmFI	GGGAC	4 cut(s)	936, 1351, 1604, 1751
BsnI	GGCC	5 cut(s)	332, 887, 1500, 2028, 2140
Bso31I	GGTCTC	1 cut(s)	366
BsoBI	CYCGRG	2 cut(s)	2088, 2279
Bsp1286I	GDGCHC	3 cut(s)	34, 1269, 2517
Bsp13I	TCCGGA	1 cut(s)	451
Bsp143I	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
BspANI	GGCC	5 cut(s)	332, 887, 1500, 2028, 2140
BspCNI	CTCAG	2 cut(s)	1255, 2204
BspEI	TCCGGA	1 cut(s)	451
BspFNI	CGCG	1 cut(s)	2133
BspHI	TCATGA	1 cut(s)	1525
BspLI	GGNNCC	5 cut(s)	14, 711, 1739, 1740, 2119
BspOI	GCTAGC	1 cut(s)	1707
BspPI	GGATC	4 cut(s)	1941, 2112, 2125, 2323
BspTNI	GGTCTC	1 cut(s)	366
BsrDI	GCAATG	2 cut(s)	628, 682
BsrFI	RCCGGY	1 cut(s)	85
BsrI	ACTGG	3 cut(s)	340, 1201, 2182
BssAI	RCCGGY	1 cut(s)	85
BssECI	CCNNGG	6 cut(s)	25, 888, 2088, 2089, 2131, 2280
BssMI	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
BssNAI	GTATAC	1 cut(s)	1764
Bst1107I	GTATAC	1 cut(s)	1764
Bst2UI	CCWGG	3 cut(s)	366, 890, 2115
Bst6I	CTCTTC	1 cut(s)	779
BstAPI	GCANNNNNTGC	2 cut(s)	1283, 2291
BstBAI	YACGTR	1 cut(s)	641
BstC8I	GCNNGC	5 cut(s)	471, 885, 1705, 2026, 2668
BstDEI	CTNAG	6 cut(s)	1263, 1319, 1517, 2191, 2333, 2671
BstDSI	CCRYGG	1 cut(s)	2131
BstEII	GGTNACC	1 cut(s)	106
BstF5I	GGATG	7 cut(s)	706, 745, 826, 1339, 1618, 1723, 2397
BstFNI	CGCG	1 cut(s)	2133
BstKTI	GATC	9 cut(s)	1429, 1476, 1813, 1820, 1936, 2120, 2260, 2331, 2464
BstMAI	GTCTC	3 cut(s)	106, 366, 1319
BstMBI	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	7 cut(s)	256, 290, 1199, 1283, 1574, 2291, 2411
BstNI	CCWGG	3 cut(s)	366, 890, 2115
BstNSI	RCATGY	2 cut(s)	1921, 2628
BstPI	GGTNACC	1 cut(s)	106
BstSCI	CCNGG	7 cut(s)	364, 473, 721, 888, 2087, 2088, 2113
BstSFI	CTRYAG	1 cut(s)	7
BstUI	CGCG	1 cut(s)	2133
BstV2I	GAAGAC	4 cut(s)	542, 1499, 2313, 2358
BstX2I	RGATCY	3 cut(s)	1473, 2117, 2461
BstYI	RGATCY	3 cut(s)	1473, 2117, 2461
BstZ17I	GTATAC	1 cut(s)	1764
BsuRI	GGCC	5 cut(s)	332, 887, 1500, 2028, 2140
BtgI	CCRYGG	1 cut(s)	2131
BtsCI	GGATG	7 cut(s)	706, 745, 826, 1339, 1618, 1723, 2397
BtsI	GCAGTG	1 cut(s)	1281
BtsIMutI	CAGTG	8 cut(s)	333, 759, 1194, 1281, 1677, 2062, 2175, 2379
Cac8I	GCNNGC	5 cut(s)	471, 885, 1705, 2026, 2668
CaiI	CAGNNNCTG	1 cut(s)	2024
CciI	TCATGA	1 cut(s)	1525
Cfr10I	RCCGGY	1 cut(s)	85
Cfr13I	GGNCC	4 cut(s)	886, 1532, 1738, 2027
Cfr42I	CCGCGG	1 cut(s)	2134
Cfr9I	CCCGGG	1 cut(s)	2088
Csp6I	GTAC	2 cut(s)	726, 750
CspAI	ACCGGT	1 cut(s)	85
CviAII	CATG	9 cut(s)	1350, 1526, 1541, 1587, 1658, 1918, 2122, 2528, 2625
CviQI	GTAC	2 cut(s)	726, 750
DdeI	CTNAG	6 cut(s)	1263, 1319, 1517, 2191, 2333, 2671
DpnI	GATC	9 cut(s)	1428, 1475, 1812, 1819, 1935, 2119, 2259, 2330, 2463
DpnII	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
DraI	TTTAAA	1 cut(s)	2574
DrdI	GACNNNNNNGTC	1 cut(s)	2270
DseDI	GACNNNNNNGTC	1 cut(s)	2270
EaeI	YGGCCR	1 cut(s)	330
Eam1104I	CTCTTC	1 cut(s)	779
EarI	CTCTTC	1 cut(s)	779
Ecl136II	GAGCTC	2 cut(s)	32, 2515
Eco24I	GRGCYC	2 cut(s)	34, 2517
Eco31I	GGTCTC	1 cut(s)	366
Eco32I	GATATC	1 cut(s)	1011
Eco47I	GGWCC	2 cut(s)	1532, 1738
Eco53kI	GAGCTC	2 cut(s)	32, 2515
Eco57I	CTGAAG	1 cut(s)	1221
Eco72I	CACGTG	1 cut(s)	641
Eco88I	CYCGRG	2 cut(s)	2088, 2279
Eco91I	GGTNACC	1 cut(s)	106
EcoICRI	GAGCTC	2 cut(s)	32, 2515
EcoO109I	RGGNCCY	2 cut(s)	1532, 1738
EcoO65I	GGTNACC	1 cut(s)	106
EcoRII	CCWGG	3 cut(s)	364, 888, 2113
EcoRV	GATATC	1 cut(s)	1011
EcoT38I	GRGCYC	2 cut(s)	34, 2517
FaeI	CATG	9 cut(s)	1353, 1529, 1544, 1590, 1661, 1921, 2125, 2531, 2628
FaqI	GGGAC	4 cut(s)	936, 1351, 1604, 1751
FatI	CATG	9 cut(s)	1349, 1525, 1540, 1586, 1657, 1917, 2121, 2527, 2624
FblI	GTMKAC	3 cut(s)	210, 1763, 2338
FokI	GGATG	7 cut(s)	713, 752, 833, 1346, 1625, 1730, 2384
FriOI	GRGCYC	2 cut(s)	34, 2517
FspBI	CTAG	4 cut(s)	1401, 1574, 1704, 2216
GsuI	CTGGAG	3 cut(s)	1218, 1812, 1914
HaeIII	GGCC	5 cut(s)	332, 887, 1500, 2028, 2140
HapII	CCGG	7 cut(s)	86, 185, 244, 452, 474, 722, 2089
Hin1II	CATG	9 cut(s)	1353, 1529, 1544, 1590, 1661, 1921, 2125, 2531, 2628
HincII	GTYRAC	2 cut(s)	211, 900
HindII	GTYRAC	2 cut(s)	211, 900
HindIII	AAGCTT	1 cut(s)	2322
HpaII	CCGG	7 cut(s)	86, 185, 244, 452, 474, 722, 2089
Hpy166II	GTNNAC	6 cut(s)	211, 728, 900, 1678, 1764, 2339
Hpy188I	TCNGA	6 cut(s)	29, 1114, 1264, 1371, 1431, 2184
Hpy8I	GTNNAC	6 cut(s)	211, 728, 900, 1678, 1764, 2339
Hpy99I	CGWCG	2 cut(s)	212, 215
HpyAV	CCTTC	8 cut(s)	752, 784, 821, 862, 1523, 2063, 2130, 2581
HpyCH4IV	ACGT	2 cut(s)	640, 1256
HpyF10VI	GCNNNNNNNGC	7 cut(s)	256, 290, 1199, 1283, 1574, 2291, 2411
HpyF3I	CTNAG	6 cut(s)	1263, 1319, 1517, 2191, 2333, 2671
HpySE526I	ACGT	2 cut(s)	640, 1256
Hsp92II	CATG	9 cut(s)	1353, 1529, 1544, 1590, 1661, 1921, 2125, 2531, 2628
KflI	GGGWCCC	1 cut(s)	1738
Kpn2I	TCCGGA	1 cut(s)	451
KspI	CCGCGG	1 cut(s)	2134
Kzo9I	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
LmnI	GCTCC	6 cut(s)	29, 37, 709, 1199, 2184, 2512
LweI	GCATC	5 cut(s)	215, 1334, 2011, 2281, 2423
MaeI	CTAG	4 cut(s)	1401, 1574, 1704, 2216
MaeII	ACGT	2 cut(s)	640, 1256
MaeIII	GTNAC	9 cut(s)	92, 106, 419, 634, 703, 812, 1880, 2272, 2531
MalI	GATC	9 cut(s)	1428, 1475, 1812, 1819, 1935, 2119, 2259, 2330, 2463
MboI	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
MfeI	CAATTG	3 cut(s)	1743, 2226, 2312
MflI	RGATCY	3 cut(s)	1473, 2117, 2461
MhlI	GDGCHC	3 cut(s)	34, 1269, 2517
MlsI	TGGCCA	1 cut(s)	332
MluNI	TGGCCA	1 cut(s)	332
MlyI	GAGTC	3 cut(s)	108, 449, 457
MmeI	TCCRAC	3 cut(s)	183, 1488, 2162
Mox20I	TGGCCA	1 cut(s)	332
MroI	TCCGGA	1 cut(s)	451
MscI	TGGCCA	1 cut(s)	332
MslI	CAYNNNNRTG	5 cut(s)	442, 1069, 1272, 1585, 1656
Msp20I	TGGCCA	1 cut(s)	332
MspA1I	CMGCKG	4 cut(s)	1823, 1871, 2133, 2560
MspI	CCGG	7 cut(s)	86, 185, 244, 452, 474, 722, 2089
MspR9I	CCNGG	7 cut(s)	366, 475, 723, 890, 2089, 2090, 2115
MunI	CAATTG	3 cut(s)	1743, 2226, 2312
MvaI	CCWGG	3 cut(s)	366, 890, 2115
MvnI	CGCG	1 cut(s)	2133
MwoI	GCNNNNNNNGC	7 cut(s)	256, 290, 1199, 1283, 1574, 2291, 2411
NciI	CCSGG	4 cut(s)	475, 723, 2089, 2090
NdeII	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
NheI	GCTAGC	1 cut(s)	1703
NlaIII	CATG	9 cut(s)	1353, 1529, 1544, 1590, 1661, 1921, 2125, 2531, 2628
NlaIV	GGNNCC	5 cut(s)	14, 711, 1739, 1740, 2119
NmuCI	GTSAC	3 cut(s)	106, 419, 2272
NspI	RCATGY	2 cut(s)	1921, 2628
PagI	TCATGA	1 cut(s)	1525
PciI	ACATGT	1 cut(s)	2624
PfeI	GAWTC	7 cut(s)	171, 217, 1178, 1397, 1463, 2166, 2234
PflMI	CCANNNNNTGG	2 cut(s)	1297, 1748
PinAI	ACCGGT	1 cut(s)	85
PleI	GAGTC	3 cut(s)	107, 449, 456
PmaCI	CACGTG	1 cut(s)	641
PmlI	CACGTG	1 cut(s)	641
PpsI	GAGTC	3 cut(s)	107, 449, 456
Ppu21I	YACGTR	1 cut(s)	641
PpuMI	RGGWCCY	2 cut(s)	1532, 1738
PscI	ACATGT	1 cut(s)	2624
PshBI	ATTAAT	1 cut(s)	1757
PsiI	TTATAA	1 cut(s)	1253
Psp124BI	GAGCTC	2 cut(s)	34, 2517
Psp1406I	AACGTT	1 cut(s)	1256
Psp5II	RGGWCCY	2 cut(s)	1532, 1738
Psp6I	CCWGG	3 cut(s)	364, 888, 2113
PspCI	CACGTG	1 cut(s)	641
PspEI	GGTNACC	1 cut(s)	106
PspGI	CCWGG	3 cut(s)	364, 888, 2113
PspN4I	GGNNCC	5 cut(s)	14, 711, 1739, 1740, 2119
PspPI	GGNCC	4 cut(s)	886, 1532, 1738, 2027
PspPPI	RGGWCCY	2 cut(s)	1532, 1738
PstNI	CAGNNNCTG	1 cut(s)	2024
PsuI	RGATCY	3 cut(s)	1473, 2117, 2461
PvuII	CAGCTG	3 cut(s)	1823, 1871, 2560
RsaI	GTAC	2 cut(s)	727, 751
RsaNI	GTAC	2 cut(s)	726, 750
RseI	CAYNNNNRTG	5 cut(s)	442, 1069, 1272, 1585, 1656
SacI	GAGCTC	2 cut(s)	34, 2517
SacII	CCGCGG	1 cut(s)	2134
SalI	GTCGAC	1 cut(s)	209
Sau3AI	GATC	9 cut(s)	1426, 1473, 1810, 1817, 1933, 2117, 2257, 2328, 2461
Sau96I	GGNCC	4 cut(s)	886, 1532, 1738, 2027
SchI	GAGTC	3 cut(s)	108, 449, 457
ScrFI	CCNGG	7 cut(s)	366, 475, 723, 890, 2089, 2090, 2115
SduI	GDGCHC	3 cut(s)	34, 1269, 2517
SfaNI	GCATC	5 cut(s)	215, 1334, 2011, 2281, 2423
SfcI	CTRYAG	1 cut(s)	7
Sfr303I	CCGCGG	1 cut(s)	2134
SgrBI	CCGCGG	1 cut(s)	2134
SgrDI	CGTCGACG	1 cut(s)	209
SinI	GGWCC	2 cut(s)	1532, 1738
SmaI	CCCGGG	1 cut(s)	2090
SmiMI	CAYNNNNRTG	5 cut(s)	442, 1069, 1272, 1585, 1656
SmlI	CTYRAG	3 cut(s)	457, 1831, 2161
SmoI	CTYRAG	3 cut(s)	457, 1831, 2161
SspMI	CTAG	4 cut(s)	1401, 1574, 1704, 2216
SstI	GAGCTC	2 cut(s)	34, 2517
StyD4I	CCNGG	7 cut(s)	364, 473, 721, 888, 2087, 2088, 2113
TaiI	ACGT	2 cut(s)	643, 1259
TaqI	TCGA	6 cut(s)	210, 479, 1007, 1149, 1487, 2650
TaqII	GACCGA	1 cut(s)	94
TauI	GCSGC	2 cut(s)	179, 2414
TfiI	GAWTC	7 cut(s)	171, 217, 1178, 1397, 1463, 2166, 2234
TscAI	CASTG	8 cut(s)	340, 759, 1201, 1288, 1677, 2062, 2182, 2386
TseFI	GTSAC	3 cut(s)	106, 419, 2272
Tsp45I	GTSAC	3 cut(s)	106, 419, 2272
TspGWI	ACGGA	4 cut(s)	722, 1352, 1998, 2219
TspMI	CCCGGG	1 cut(s)	2088
TspRI	CASTG	8 cut(s)	340, 759, 1201, 1288, 1677, 2062, 2182, 2386
Van91I	CCANNNNNTGG	2 cut(s)	1297, 1748
VpaK11BI	GGWCC	2 cut(s)	1532, 1738
VspI	ATTAAT	1 cut(s)	1757
XapI	RAATTY	7 cut(s)	299, 351, 521, 1372, 1725, 1844, 2548
XceI	RCATGY	2 cut(s)	1921, 2628
XcmI	CCANNNNNNNNNTGG	1 cut(s)	340
XmaI	CCCGGG	1 cut(s)	2088
XmiI	GTMKAC	3 cut(s)	210, 1763, 2338
XspI	CTAG	4 cut(s)	1401, 1574, 1704, 2216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.