ATPase 9, plasma
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80660 AT1G80660 AT1G80660 AT1G80660 |
| fragaria_vesca | FvH4_6g28890 |
| malus_domestica | MD09G1223600.v1.1 |
| prunus_persica | Prupe.3G095900_v2.0.a1 Prupe.3G095900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0133471 |
| rosa_laevigata | RLG00000019336 |
| rosa_multiflora | Rmu_sc0004887.1_g000004 Rmu_sc0007236.1_g000003 |
| rosa_rugosa | Rorug02G0311900 Rorug02G0311900 Rorug02G0311900 Rorug02G0312000 |
| rosa_samantha | Rh2AG364500 Rh2BG370200 Rh2CG347800 Rh2DG387200 |
| rosa_wichuraiana | Rw2G029710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2465 |
| Acc36I | ACCTGC | 1 cut(s) | 2465 |
| Acc65I | GGTACC | 2 cut(s) | 460, 585 |
| AccB1I | GGYRCC | 5 cut(s) | 460, 585, 938, 1269, 2165 |
| AccBSI | CCGCTC | 2 cut(s) | 2553, 2648 |
| AccI | GTMKAC | 2 cut(s) | 1038, 2286 |
| AciI | CCGC | 3 cut(s) | 2553, 2646, 2752 |
| AclI | AACGTT | 1 cut(s) | 1533 |
| AclWI | GGATC | 3 cut(s) | 524, 1322, 1469 |
| AcoI | YGGCCR | 3 cut(s) | 252, 293, 1236 |
| AcsI | RAATTY | 1 cut(s) | 2234 |
| AcuI | CTGAAG | 3 cut(s) | 125, 212, 2778 |
| AcyI | GRCGYC | 1 cut(s) | 939 |
| AfaI | GTAC | 5 cut(s) | 462, 587, 824, 1234, 2574 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 73, 225, 226, 675, 1174, 2343 |
| AflII | CTTAAG | 1 cut(s) | 2525 |
| AflIII | ACRYGT | 1 cut(s) | 1605 |
| AgsI | TTSAA | 2 cut(s) | 2294, 2846 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1506 |
| AjiI | CACGTC | 1 cut(s) | 2800 |
| AjnI | CCWGG | 9 cut(s) | 54, 463, 690, 1103, 1432, 1882, 2172, 2310, 2561 |
| AleI | CACNNNNGTG | 1 cut(s) | 2153 |
| Alw21I | GWGCWC | 2 cut(s) | 1291, 1311 |
| Alw26I | GTCTC | 5 cut(s) | 521, 1493, 1568, 2372, 2675 |
| Alw44I | GTGCAC | 1 cut(s) | 1287 |
| AlwI | GGATC | 3 cut(s) | 524, 1322, 1469 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2282 |
| Ama87I | CYCGRG | 2 cut(s) | 607, 1412 |
| AoxI | GGCC | 8 cut(s) | 151, 252, 293, 715, 1176, 1236, 2559, 2665 |
| ApaLI | GTGCAC | 1 cut(s) | 1287 |
| ApoI | RAATTY | 1 cut(s) | 2234 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2796, 2828 |
| Asp718I | GGTACC | 2 cut(s) | 460, 585 |
| AspLEI | GCGC | 1 cut(s) | 941 |
| AspS9I | GGNCC | 3 cut(s) | 152, 1198, 2334 |
| AsuC2I | CCSGG | 3 cut(s) | 591, 1274, 2364 |
| AsuNHI | GCTAGC | 1 cut(s) | 1558 |
| AvaI | CYCGRG | 2 cut(s) | 607, 1412 |
| AvaII | GGWCC | 2 cut(s) | 1198, 2334 |
| BaeGI | GKGCMC | 3 cut(s) | 1291, 1413, 2799 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 577, 610 |
| BalI | TGGCCA | 2 cut(s) | 254, 295 |
| BanI | GGYRCC | 5 cut(s) | 460, 585, 938, 1269, 2165 |
| BanII | GRGCYC | 3 cut(s) | 1311, 1433, 1516 |
| BbsI | GAAGAC | 4 cut(s) | 286, 1370, 1699, 2494 |
| Bbv12I | GWGCWC | 2 cut(s) | 1291, 1311 |
| BceAI | ACGGC | 2 cut(s) | 1251, 1946 |
| BciT130I | CCWGG | 9 cut(s) | 56, 465, 692, 1105, 1434, 1884, 2174, 2312, 2563 |
| BciVI | GTATCC | 3 cut(s) | 74, 813, 1620 |
| BclI | TGATCA | 2 cut(s) | 474, 1542 |
| BcnI | CCSGG | 3 cut(s) | 591, 1274, 2364 |
| BcoDI | GTCTC | 5 cut(s) | 521, 1493, 1568, 2372, 2675 |
| BfaI | CTAG | 4 cut(s) | 443, 1398, 1559, 1851 |
| BfmI | CTRYAG | 4 cut(s) | 375, 994, 2491, 2713 |
| BfoI | RGCGCY | 1 cut(s) | 942 |
| BfrI | CTTAAG | 1 cut(s) | 2525 |
| BfuAI | ACCTGC | 1 cut(s) | 2465 |
| BfuI | GTATCC | 3 cut(s) | 74, 813, 1620 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2741 |
| BglII | AGATCT | 2 cut(s) | 2139, 2246 |
| BlpI | GCTNAGC | 1 cut(s) | 2688 |
| Bme18I | GGWCC | 2 cut(s) | 1198, 2334 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1506 |
| BmeT110I | CYCGRG | 2 cut(s) | 607, 1412 |
| BmgBI | CACGTC | 1 cut(s) | 2800 |
| BmgT120I | GGNCC | 3 cut(s) | 152, 1198, 2334 |
| BmrI | ACTGGG | 4 cut(s) | 62, 666, 1017, 2443 |
| BmsI | GCATC | 6 cut(s) | 499, 1120, 1780, 1825, 1834, 1868 |
| BmtI | GCTAGC | 1 cut(s) | 1562 |
| BmuI | ACTGGG | 4 cut(s) | 62, 666, 1017, 2443 |
| BpiI | GAAGAC | 4 cut(s) | 286, 1370, 1699, 2494 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2373, 2405 |
| BpmI | CTGGAG | 5 cut(s) | 77, 185, 1779, 1794, 2172 |
| Bpu10I | CCTNAGC | 2 cut(s) | 411, 2268 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2688 |
| BpuEI | CTTGAG | 3 cut(s) | 521, 2597, 2774 |
| BpuMI | CCSGG | 3 cut(s) | 591, 1274, 2364 |
| Bsa29I | ATCGAT | 2 cut(s) | 543, 1137 |
| BsaBI | GATNNNNATC | 2 cut(s) | 528, 1973 |
| BsaHI | GRCGYC | 1 cut(s) | 939 |
| BsaI | GGTCTC | 2 cut(s) | 1493, 2372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1767, 1797 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 73, 225, 226, 675, 1174, 2343 |
| Bse118I | RCCGGY | 1 cut(s) | 1700 |
| Bse3DI | GCAATG | 4 cut(s) | 101, 255, 376, 2415 |
| Bse8I | GATNNNNATC | 2 cut(s) | 528, 1973 |
| BseBI | CCWGG | 9 cut(s) | 56, 465, 692, 1105, 1434, 1884, 2174, 2312, 2563 |
| BseCI | ATCGAT | 2 cut(s) | 543, 1137 |
| BseGI | GGATG | 9 cut(s) | 529, 835, 960, 991, 1075, 1087, 1135, 1648, 2474 |
| BseJI | GATNNNNATC | 2 cut(s) | 528, 1973 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 73, 225, 226, 675, 1174, 2343 |
| BseMI | GCAATG | 4 cut(s) | 101, 255, 376, 2415 |
| BseMII | CTCAG | 5 cut(s) | 410, 1185, 2259, 2670, 2679 |
| BseRI | GAGGAG | 2 cut(s) | 983, 2100 |
| BseSI | GKGCMC | 3 cut(s) | 1291, 1413, 2799 |
| BsgI | GTGCAG | 1 cut(s) | 1515 |
| BshFI | GGCC | 8 cut(s) | 153, 254, 295, 717, 1178, 1238, 2561, 2667 |
| BshNI | GGYRCC | 5 cut(s) | 460, 585, 938, 1269, 2165 |
| BshVI | ATCGAT | 2 cut(s) | 543, 1137 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1291, 1311 |
| BsiHKCI | CYCGRG | 2 cut(s) | 607, 1412 |
| BsiSI | CCGG | 4 cut(s) | 591, 1273, 1701, 2364 |
| BsiWI | CGTACG | 1 cut(s) | 1232 |
| BslFI | GGGAC | 3 cut(s) | 1024, 1470, 2320 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 73, 225, 226, 675, 1174, 2343 |
| BsmAI | GTCTC | 5 cut(s) | 521, 1493, 1568, 2372, 2675 |
| BsmBI | CGTCTC | 1 cut(s) | 521 |
| BsmFI | GGGAC | 3 cut(s) | 1024, 1470, 2320 |
| BsnI | GGCC | 8 cut(s) | 153, 254, 295, 717, 1178, 1238, 2561, 2667 |
| Bso31I | GGTCTC | 2 cut(s) | 1493, 2372 |
| BsoBI | CYCGRG | 2 cut(s) | 607, 1412 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1291, 1311, 1413, 1433, 1516, 2799 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2688 |
| Bsp19I | CCATGG | 4 cut(s) | 261, 1047, 1442, 2452 |
| BspACI | CCGC | 3 cut(s) | 2553, 2646, 2752 |
| BspANI | GGCC | 8 cut(s) | 153, 254, 295, 717, 1178, 1238, 2561, 2667 |
| BspCNI | CTCAG | 5 cut(s) | 411, 1186, 2260, 2671, 2680 |
| BspDI | ATCGAT | 2 cut(s) | 543, 1137 |
| BspHI | TCATGA | 2 cut(s) | 2076, 2181 |
| BspMAI | CTGCAG | 2 cut(s) | 379, 998 |
| BspMI | ACCTGC | 1 cut(s) | 2465 |
| BspOI | GCTAGC | 1 cut(s) | 1562 |
| BspPI | GGATC | 3 cut(s) | 524, 1322, 1469 |
| BspT107I | GGYRCC | 5 cut(s) | 460, 585, 938, 1269, 2165 |
| BspTI | CTTAAG | 1 cut(s) | 2525 |
| BspTNI | GGTCTC | 2 cut(s) | 1493, 2372 |
| BsrBI | CCGCTC | 2 cut(s) | 2553, 2648 |
| BsrDI | GCAATG | 4 cut(s) | 101, 255, 376, 2415 |
| BsrFI | RCCGGY | 1 cut(s) | 1700 |
| BssAI | RCCGGY | 1 cut(s) | 1700 |
| BssNI | GRCGYC | 1 cut(s) | 939 |
| Bst2UI | CCWGG | 9 cut(s) | 56, 465, 692, 1105, 1434, 1884, 2174, 2312, 2563 |
| Bst4CI | ACNGT | 8 cut(s) | 619, 889, 1036, 1408, 1493, 1890, 2188, 2860 |
| Bst6I | CTCTTC | 3 cut(s) | 128, 944, 2118 |
| BstACI | GRCGYC | 1 cut(s) | 939 |
| BstAFI | CTTAAG | 1 cut(s) | 2525 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 371, 509, 1844, 2668 |
| BstC8I | GCNNGC | 5 cut(s) | 240, 367, 1560, 2669, 2754 |
| BstDEI | CTNAG | 6 cut(s) | 411, 419, 1194, 2268, 2679, 2688 |
| BstDSI | CCRYGG | 4 cut(s) | 261, 1047, 1442, 2452 |
| BstEII | GGTNACC | 2 cut(s) | 1163, 1550 |
| BstF5I | GGATG | 9 cut(s) | 529, 835, 960, 991, 1075, 1087, 1135, 1648, 2474 |
| BstH2I | RGCGCY | 1 cut(s) | 942 |
| BstHHI | GCGC | 1 cut(s) | 941 |
| BstMAI | GTCTC | 5 cut(s) | 521, 1493, 1568, 2372, 2675 |
| BstNI | CCWGG | 9 cut(s) | 56, 465, 692, 1105, 1434, 1884, 2174, 2312, 2563 |
| BstNSI | RCATGY | 2 cut(s) | 1349, 1609 |
| BstPI | GGTNACC | 2 cut(s) | 1163, 1550 |
| BstSFI | CTRYAG | 4 cut(s) | 375, 994, 2491, 2713 |
| BstSLI | GKGCMC | 3 cut(s) | 1291, 1413, 2799 |
| BstV2I | GAAGAC | 4 cut(s) | 286, 1370, 1699, 2494 |
| BstX2I | RGATCY | 2 cut(s) | 2139, 2246 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 25, 262, 291, 2124, 2459 |
| BstYI | RGATCY | 2 cut(s) | 2139, 2246 |
| Bsu15I | ATCGAT | 2 cut(s) | 543, 1137 |
| BsuI | GTATCC | 3 cut(s) | 74, 813, 1620 |
| BsuRI | GGCC | 8 cut(s) | 153, 254, 295, 717, 1178, 1238, 2561, 2667 |
| BsuTUI | ATCGAT | 2 cut(s) | 543, 1137 |
| BtgI | CCRYGG | 4 cut(s) | 261, 1047, 1442, 2452 |
| BtgZI | GCGATG | 1 cut(s) | 751 |
| BtrI | CACGTC | 1 cut(s) | 2800 |
| BtsCI | GGATG | 9 cut(s) | 529, 835, 960, 991, 1075, 1087, 1135, 1648, 2474 |
| BtsI | GCAGTG | 2 cut(s) | 1003, 1833 |
| BveI | ACCTGC | 1 cut(s) | 2465 |
| Cac8I | GCNNGC | 5 cut(s) | 240, 367, 1560, 2669, 2754 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2282 |
| CciI | TCATGA | 2 cut(s) | 2076, 2181 |
| CfoI | GCGC | 1 cut(s) | 941 |
| Cfr10I | RCCGGY | 1 cut(s) | 1700 |
| Cfr13I | GGNCC | 3 cut(s) | 152, 1198, 2334 |
| ClaI | ATCGAT | 2 cut(s) | 543, 1137 |
| CsiI | ACCWGGT | 1 cut(s) | 690 |
| Csp6I | GTAC | 5 cut(s) | 461, 586, 823, 1233, 2573 |
| CviQI | GTAC | 5 cut(s) | 461, 586, 823, 1233, 2573 |
| DdeI | CTNAG | 6 cut(s) | 411, 419, 1194, 2268, 2679, 2688 |
| DinI | GGCGCC | 1 cut(s) | 940 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1506 |
| EaeI | YGGCCR | 3 cut(s) | 252, 293, 1236 |
| Eam1104I | CTCTTC | 3 cut(s) | 128, 944, 2118 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1506 |
| EarI | CTCTTC | 3 cut(s) | 128, 944, 2118 |
| Ecl136II | GAGCTC | 1 cut(s) | 1309 |
| Eco147I | AGGCCT | 1 cut(s) | 2561 |
| Eco24I | GRGCYC | 3 cut(s) | 1311, 1433, 1516 |
| Eco31I | GGTCTC | 2 cut(s) | 1493, 2372 |
| Eco32I | GATATC | 1 cut(s) | 1816 |
| Eco47I | GGWCC | 2 cut(s) | 1198, 2334 |
| Eco53kI | GAGCTC | 1 cut(s) | 1309 |
| Eco57I | CTGAAG | 3 cut(s) | 125, 212, 2778 |
| Eco88I | CYCGRG | 2 cut(s) | 607, 1412 |
| Eco91I | GGTNACC | 2 cut(s) | 1163, 1550 |
| EcoICRI | GAGCTC | 1 cut(s) | 1309 |
| EcoO65I | GGTNACC | 2 cut(s) | 1163, 1550 |
| EcoRII | CCWGG | 9 cut(s) | 54, 463, 690, 1103, 1432, 1882, 2172, 2310, 2561 |
| EcoRV | GATATC | 1 cut(s) | 1816 |
| EcoT38I | GRGCYC | 3 cut(s) | 1311, 1433, 1516 |
| EgeI | GGCGCC | 1 cut(s) | 940 |
| EheI | GGCGCC | 1 cut(s) | 940 |
| Esp3I | CGTCTC | 1 cut(s) | 521 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2126, 2158 |
| FaqI | GGGAC | 3 cut(s) | 1024, 1470, 2320 |
| FauI | CCCGC | 1 cut(s) | 2745 |
| FauNDI | CATATG | 1 cut(s) | 758 |
| FbaI | TGATCA | 2 cut(s) | 474, 1542 |
| FblI | GTMKAC | 2 cut(s) | 1038, 2286 |
| FokI | GGATG | 9 cut(s) | 536, 842, 967, 998, 1082, 1094, 1142, 1655, 2481 |
| FriOI | GRGCYC | 3 cut(s) | 1311, 1433, 1516 |
| FspBI | CTAG | 4 cut(s) | 443, 1398, 1559, 1851 |
| GlaI | GCGC | 1 cut(s) | 940 |
| GsuI | CTGGAG | 5 cut(s) | 77, 185, 1779, 1794, 2172 |
| HaeII | RGCGCY | 1 cut(s) | 942 |
| HaeIII | GGCC | 8 cut(s) | 153, 254, 295, 717, 1178, 1238, 2561, 2667 |
| HapII | CCGG | 4 cut(s) | 591, 1273, 1701, 2364 |
| HhaI | GCGC | 1 cut(s) | 941 |
| Hin1I | GRCGYC | 1 cut(s) | 939 |
| Hin6I | GCGC | 1 cut(s) | 939 |
| HinP1I | GCGC | 1 cut(s) | 939 |
| HincII | GTYRAC | 2 cut(s) | 697, 1531 |
| HindII | GTYRAC | 2 cut(s) | 697, 1531 |
| HindIII | AAGCTT | 3 cut(s) | 343, 600, 1028 |
| HpaII | CCGG | 4 cut(s) | 591, 1273, 1701, 2364 |
| Hpy166II | GTNNAC | 7 cut(s) | 697, 1039, 1075, 1289, 1531, 1831, 2287 |
| Hpy188I | TCNGA | 9 cut(s) | 192, 420, 1100, 1258, 1820, 1864, 2218, 2255, 2728 |
| Hpy8I | GTNNAC | 7 cut(s) | 697, 1039, 1075, 1289, 1531, 1831, 2287 |
| Hpy99I | CGWCG | 2 cut(s) | 1512, 2804 |
| HpyCH4III | ACNGT | 8 cut(s) | 619, 889, 1036, 1408, 1493, 1890, 2188, 2860 |
| HpyCH4IV | ACGT | 2 cut(s) | 1533, 2799 |
| HpyF3I | CTNAG | 6 cut(s) | 411, 419, 1194, 2268, 2679, 2688 |
| HpySE526I | ACGT | 2 cut(s) | 1533, 2799 |
| Hsp92I | GRCGYC | 1 cut(s) | 939 |
| HspAI | GCGC | 1 cut(s) | 939 |
| KasI | GGCGCC | 1 cut(s) | 938 |
| KpnI | GGTACC | 2 cut(s) | 464, 589 |
| Ksp22I | TGATCA | 2 cut(s) | 474, 1542 |
| LmnI | GCTCC | 7 cut(s) | 58, 235, 767, 1100, 1798, 2381, 2776 |
| LweI | GCATC | 6 cut(s) | 499, 1120, 1780, 1825, 1834, 1868 |
| MabI | ACCWGGT | 1 cut(s) | 690 |
| MaeI | CTAG | 4 cut(s) | 443, 1398, 1559, 1851 |
| MaeII | ACGT | 2 cut(s) | 1533, 2799 |
| MaeIII | GTNAC | 8 cut(s) | 577, 898, 927, 998, 1163, 1550, 2326, 2699 |
| MbiI | CCGCTC | 2 cut(s) | 2553, 2648 |
| MfeI | CAATTG | 2 cut(s) | 873, 1264 |
| MflI | RGATCY | 2 cut(s) | 2139, 2246 |
| MhlI | GDGCHC | 6 cut(s) | 1291, 1311, 1413, 1433, 1516, 2799 |
| MlsI | TGGCCA | 2 cut(s) | 254, 295 |
| MluNI | TGGCCA | 2 cut(s) | 254, 295 |
| Mly113I | GGCGCC | 1 cut(s) | 939 |
| MlyI | GAGTC | 7 cut(s) | 575, 1006, 1247, 1452, 1655, 2114, 2207 |
| MmeI | TCCRAC | 2 cut(s) | 286, 1132 |
| Mox20I | TGGCCA | 2 cut(s) | 254, 295 |
| MscI | TGGCCA | 2 cut(s) | 254, 295 |
| MseI | TTAA | 7 cut(s) | 323, 483, 1215, 1518, 1536, 2132, 2526 |
| MslI | CAYNNNNRTG | 6 cut(s) | 260, 776, 1491, 1722, 1761, 2153 |
| Msp20I | TGGCCA | 2 cut(s) | 254, 295 |
| MspA1I | CMGCKG | 3 cut(s) | 2282, 2401, 2687 |
| MspCI | CTTAAG | 1 cut(s) | 2525 |
| MspI | CCGG | 4 cut(s) | 591, 1273, 1701, 2364 |
| MunI | CAATTG | 2 cut(s) | 873, 1264 |
| MvaI | CCWGG | 9 cut(s) | 56, 465, 692, 1105, 1434, 1884, 2174, 2312, 2563 |
| NarI | GGCGCC | 1 cut(s) | 939 |
| NciI | CCSGG | 3 cut(s) | 591, 1274, 2364 |
| NcoI | CCATGG | 4 cut(s) | 261, 1047, 1442, 2452 |
| NdeI | CATATG | 1 cut(s) | 758 |
| NheI | GCTAGC | 1 cut(s) | 1558 |
| NmuCI | GTSAC | 6 cut(s) | 577, 927, 998, 1163, 1550, 2699 |
| NspI | RCATGY | 2 cut(s) | 1349, 1609 |
| OliI | CACNNNNGTG | 1 cut(s) | 2153 |
| PagI | TCATGA | 2 cut(s) | 2076, 2181 |
| PaqCI | CACCTGC | 1 cut(s) | 2465 |
| PceI | AGGCCT | 1 cut(s) | 2561 |
| PciI | ACATGT | 1 cut(s) | 1605 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1839 |
| PfeI | GAWTC | 6 cut(s) | 214, 868, 1123, 2158, 2448, 2804 |
| Pfl23II | CGTACG | 1 cut(s) | 1232 |
| PleI | GAGTC | 7 cut(s) | 574, 1006, 1247, 1452, 1654, 2114, 2207 |
| PluTI | GGCGCC | 1 cut(s) | 942 |
| PpsI | GAGTC | 7 cut(s) | 574, 1006, 1247, 1452, 1654, 2114, 2207 |
| PscI | ACATGT | 1 cut(s) | 1605 |
| Psp124BI | GAGCTC | 1 cut(s) | 1311 |
| Psp1406I | AACGTT | 1 cut(s) | 1533 |
| Psp6I | CCWGG | 9 cut(s) | 54, 463, 690, 1103, 1432, 1882, 2172, 2310, 2561 |
| PspEI | GGTNACC | 2 cut(s) | 1163, 1550 |
| PspGI | CCWGG | 9 cut(s) | 54, 463, 690, 1103, 1432, 1882, 2172, 2310, 2561 |
| PspLI | CGTACG | 1 cut(s) | 1232 |
| PspPI | GGNCC | 3 cut(s) | 152, 1198, 2334 |
| PstI | CTGCAG | 2 cut(s) | 379, 998 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2282 |
| PsuI | RGATCY | 2 cut(s) | 2139, 2246 |
| PvuII | CAGCTG | 3 cut(s) | 2282, 2401, 2687 |
| RsaI | GTAC | 5 cut(s) | 462, 587, 824, 1234, 2574 |
| RsaNI | GTAC | 5 cut(s) | 461, 586, 823, 1233, 2573 |
| RseI | CAYNNNNRTG | 6 cut(s) | 260, 776, 1491, 1722, 1761, 2153 |
| SacI | GAGCTC | 1 cut(s) | 1311 |
| SaqAI | TTAA | 7 cut(s) | 323, 483, 1215, 1518, 1536, 2132, 2526 |
| Sau96I | GGNCC | 3 cut(s) | 152, 1198, 2334 |
| SchI | GAGTC | 7 cut(s) | 575, 1006, 1247, 1452, 1655, 2114, 2207 |
| SduI | GDGCHC | 6 cut(s) | 1291, 1311, 1413, 1433, 1516, 2799 |
| SexAI | ACCWGGT | 1 cut(s) | 690 |
| SfaNI | GCATC | 6 cut(s) | 499, 1120, 1780, 1825, 1834, 1868 |
| SfcI | CTRYAG | 4 cut(s) | 375, 994, 2491, 2713 |
| SfoI | GGCGCC | 1 cut(s) | 940 |
| SinI | GGWCC | 2 cut(s) | 1198, 2334 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 260, 776, 1491, 1722, 1761, 2153 |
| SmlI | CTYRAG | 4 cut(s) | 536, 2525, 2576, 2789 |
| SmoI | CTYRAG | 4 cut(s) | 536, 2525, 2576, 2789 |
| SseBI | AGGCCT | 1 cut(s) | 2561 |
| SsiI | CCGC | 3 cut(s) | 2553, 2646, 2752 |
| SspDI | GGCGCC | 1 cut(s) | 938 |
| SspMI | CTAG | 4 cut(s) | 443, 1398, 1559, 1851 |
| SstI | GAGCTC | 1 cut(s) | 1311 |
| StuI | AGGCCT | 1 cut(s) | 2561 |
| TaaI | ACNGT | 8 cut(s) | 619, 889, 1036, 1408, 1493, 1890, 2188, 2860 |
| TaiI | ACGT | 2 cut(s) | 1536, 2802 |
| TaqII | GACCGA | 1 cut(s) | 2322 |
| TatI | WGTACW | 2 cut(s) | 822, 2572 |
| TauI | GCSGC | 1 cut(s) | 2556 |
| TfiI | GAWTC | 6 cut(s) | 214, 868, 1123, 2158, 2448, 2804 |
| Tru1I | TTAA | 7 cut(s) | 323, 483, 1215, 1518, 1536, 2132, 2526 |
| Tru9I | TTAA | 7 cut(s) | 323, 483, 1215, 1518, 1536, 2132, 2526 |
| TseFI | GTSAC | 6 cut(s) | 577, 927, 998, 1163, 1550, 2699 |
| Tsp45I | GTSAC | 6 cut(s) | 577, 927, 998, 1163, 1550, 2699 |
| TspDTI | ATGAA | 9 cut(s) | 213, 612, 653, 1349, 1740, 1955, 2026, 2521, 2771 |
| TspGWI | ACGGA | 2 cut(s) | 285, 1967 |
| Vha464I | CTTAAG | 1 cut(s) | 2525 |
| VneI | GTGCAC | 1 cut(s) | 1287 |
| VpaK11BI | GGWCC | 2 cut(s) | 1198, 2334 |
| XapI | RAATTY | 1 cut(s) | 2234 |
| XceI | RCATGY | 2 cut(s) | 1349, 1609 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 970, 1562 |
| XmiI | GTMKAC | 2 cut(s) | 1038, 2286 |
| XspI | CTAG | 4 cut(s) | 443, 1398, 1559, 1851 |