Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004887.1

Orthogroup ID

OG0009747

Physical Location & Seq

Genomic Coordinates Reverse (-)

30213 .. 34679

Gene Structure 4467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004887.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

atggcagaaggcaaagggattagcttggaagaaatcaagaaggagaatgttgaccttgagcgaattccagttcaggaagtgtttgagcagttgcaatgcacaaaagaggggttgtcaagtgatgaagggcagaagaggattcaagtctttggcccaaacaagctcgaggaaaaaaaggaaaacaagattctgaagttcttgggttttatgtggaatcccctatcatgggttatggaaattgcagctatcatggccattgccttagcaaatggagggggaaggccaccggactggcaagactttgtgggaattacttcactgttattcatcaactccaccatcagctttatcgaagaaaacaatgcaggcaatgctgcagaagctcttatggctggtcttgccccaaaaaccaaggttctaagagatggaaaatggtctgagctagaggctgcaatcttggtaccgggagatgtagtcagcatcaagttgggagacattgtcccagctgatgcgcgtctcttggagggagatcccctcaagatagatcagtctgccctcaccggtgagtctttgcctgtgacaaggttccccggggatgaagtgttctcgggttccactgtcaagcaaggagaaattgaggcagtagtcattgccacaggggttcacaccttctttggtaaggctgctcacctggttgacagcaccaacaatgtaggccacttccaaaaggttttgacagctattggaaacttctgcatatgctctattgccataggaatggtaatagaactagtggttatgtatccaatacagcgtaggaagtacagggatgggattgacaatctcttggtgcttctcattggagggattccgattgctatgccaacagtgttgtcagttaccatggctattggttctcaccgcctgtccacacaaggcgctatcacaaagaggatgacagccattgaggagatggctggcatggatgtcctatgcagtgataagactgggaccctgactctcaacaagcttacagtagacaagaccatggtgtttgtaaaggatgttgacaaggatggtctcattttgctcggcgccagggcttcgagggttgagaatcaggacgctattgatacatgtattgttggaatgttgggcgaccccaaggaggccagggaaggtataactgaggtccactttttgccctttaatccagttgaaaagcgaacagccataacatacattgatgctgatggcaattggcaccgagttagcaaaggtgcaccggagcagatcattgacctctgcgagctaaaagacgatgcaaggaagaaagcacatgcaattattgacaagtttgcagatcgcggtctccgttcccttgctgttgctagacagactgtgccagaaaaaaacaaagagagtgctggaacaccatggcagtttgtaggcctcttgcctctctttgatcctcccaggcatgacagtgcagagaccattcgacgtgcccttcatcttggtgttaatgttaagatgatcactggtgaccaacttgccattggtaaggaaactggccgcagactcggcatgggaaccaacatgtatccttcttcttccctccttggtgaacacaaggacgagtctgttgcttccctccctattgatgagcttattgaaaaggctgatggctttgctggtgtcttcccagagcacaaatatgaaattgtgaagcggctgcaagacaggaagcatatttgtgggatgactggagatggtgtgaatgatgccccagcgctaaagaaggcagacattggtattgcagttgatgatgcaacggacgctgctcggagcgcctctgacattgtcctaaccgaaccaggattgtctgtgattatcagtgctgtgctgacaagcagagccattttccagaggatgaagaactacaccatctatgctgtttccatcacaattcgtgtcgtcctaggatttttgctccttgctcttatctggaagtttgacttctcacctttcatggttctcattattgccatacttaatgatggaacaatcatgactatttcaaaggatagggtgaagccatctcctcttccagactcatggaagctaaaggagatctttgccactggtatcgtccttggcacctacatggctgtcatgactgttgttttcttctgggctgctaatgattctgactttttctcagacaagtttggtgtaagatctatcagaggcagcgataaggagcttacggcagctgtctaccttcaagttagtattatcagtcaggcacttatctttgtcactcgatcccgaagctggtcttttgtagaacgccccggtgccatgctcatgattgccttttgcatagcacagctgcttgctacaattctcgctgtttatgcaaattggggctttgcaagaatcaaaggtatgggatggggatgggcaggtgttatctggctctacagcatcatcacctacataccattggatattctcaagttcataattcgatatgcattgagtggcaaggcctgggatactgtacttgagaataagactgccttcacaacaaagaaggattatggaaagggagagagggaagcacaatgggcaacagctcaacgaaccctgcatgggctgcagcctcctgaaacatctgaactcttcaatgacaagaacaactaccgagagctatctgagatcgccgaacaggccaagaggcgagctgaagttgctaggttgagggagcttcatacactcaaggggcacgtggaatcggttgtcaaactcaaaggacttgacatcgacaccattcagcaacactacactgtctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008553 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031090 GO:0034220 GO:0036442 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 map00190

Pfam Domains

Protein Families

Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

952

Amino Acids

104.81

Weight (kDa)

6.22

Isoelectric Point (pI)

32.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009747)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80660 AT1G80660 AT1G80660 AT1G80660
fragaria_vesca	FvH4_6g28890
malus_domestica	MD09G1223600.v1.1
prunus_persica	Prupe.3G095900_v2.0.a1 Prupe.3G095900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0133471
rosa_laevigata	RLG00000019336
rosa_multiflora	Rmu_sc0004887.1_g000004 Rmu_sc0007236.1_g000003
rosa_rugosa	Rorug02G0311900 Rorug02G0311900 Rorug02G0311900 Rorug02G0312000
rosa_samantha	Rh2AG364500 Rh2BG370200 Rh2CG347800 Rh2DG387200
rosa_wichuraiana	Rw2G029710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2459
Acc36I	ACCTGC	1 cut(s)	2459
Acc65I	GGTACC	1 cut(s)	460
AccB1I	GGYRCC	5 cut(s)	460, 1094, 1263, 2159, 2360
AccI	GTMKAC	2 cut(s)	1038, 2280
AccII	CGCG	2 cut(s)	514, 1368
AciI	CCGC	4 cut(s)	922, 1368, 1576, 1732
AclWI	GGATC	3 cut(s)	524, 1463, 2322
AcoI	YGGCCR	2 cut(s)	252, 1573
AcsI	RAATTY	1 cut(s)	63
AcuI	CTGAAG	2 cut(s)	212, 2772
AcvI	CACGTG	1 cut(s)	2794
AcyI	GRCGYC	1 cut(s)	1095
AfaI	GTAC	3 cut(s)	462, 824, 2568
AfeI	AGCGCT	1 cut(s)	1794
AfiI	CCNNNNNNNGG	5 cut(s)	225, 226, 1168, 2337, 2658
AflIII	ACRYGT	2 cut(s)	1136, 1599
AgeI	ACCGGT	1 cut(s)	560
AgsI	TTSAA	6 cut(s)	143, 1220, 1676, 2082, 2288, 2692
AhlI	ACTAGT	1 cut(s)	790
AjiI	CACGTC	1 cut(s)	1505
AjnI	CCWGG	6 cut(s)	690, 1097, 1172, 1475, 1876, 2555
AloI	GAACNNNNNNTCC	2 cut(s)	587, 619
Alw21I	GWGCWC	2 cut(s)	1285, 1713
Alw26I	GTCTC	5 cut(s)	486, 521, 1085, 1376, 1487
Alw44I	GTGCAC	1 cut(s)	1281
AlwI	GGATC	3 cut(s)	524, 1463, 2322
Ama87I	CYCGRG	3 cut(s)	164, 590, 607
Aor51HI	AGCGCT	1 cut(s)	1794
AoxI	GGCC	9 cut(s)	151, 252, 281, 715, 1170, 1450, 1573, 2553, 2736
ApaLI	GTGCAC	1 cut(s)	1281
ApoI	RAATTY	1 cut(s)	63
AsiGI	ACCGGT	1 cut(s)	560
Asp700I	GAANNNNTTC	1 cut(s)	313
Asp718I	GGTACC	1 cut(s)	460
AspA2I	CCTAGG	1 cut(s)	1981
AspLEI	GCGC	5 cut(s)	514, 941, 1097, 1795, 1853
AspS9I	GGNCC	3 cut(s)	152, 1011, 1192
AsuC2I	CCSGG	4 cut(s)	465, 591, 592, 2358
AsuHPI	GGTGA	9 cut(s)	550, 575, 680, 911, 1556, 1637, 2016, 2104, 2488
AvaI	CYCGRG	3 cut(s)	164, 590, 607
AvaII	GGWCC	2 cut(s)	1011, 1192
AvrII	CCTAGG	1 cut(s)	1981
BaeGI	GKGCMC	3 cut(s)	1285, 1510, 2793
BalI	TGGCCA	1 cut(s)	254
BanI	GGYRCC	5 cut(s)	460, 1094, 1263, 2159, 2360
BbrPI	CACGTG	1 cut(s)	2794
BbsI	GAAGAC	1 cut(s)	1693
Bbv12I	GWGCWC	2 cut(s)	1285, 1713
BceAI	ACGGC	1 cut(s)	2286
BcgI	CGANNNNNNTGC	4 cut(s)	862, 896, 1628, 1662
BciT130I	CCWGG	6 cut(s)	692, 1099, 1174, 1477, 1878, 2557
BciVI	GTATCC	3 cut(s)	813, 1614, 2554
BclI	TGATCA	1 cut(s)	1536
BcnI	CCSGG	4 cut(s)	465, 591, 592, 2358
BcoDI	GTCTC	5 cut(s)	486, 521, 1085, 1376, 1487
BcuI	ACTAGT	1 cut(s)	790
BfaI	CTAG	5 cut(s)	443, 791, 1392, 1982, 2760
BfmI	CTRYAG	3 cut(s)	375, 2485, 2663
BfoI	RGCGCY	4 cut(s)	942, 1098, 1796, 1854
BfuAI	ACCTGC	1 cut(s)	2459
BfuI	GTATCC	3 cut(s)	813, 1614, 2554
BglI	GCCNNNNNGGC	1 cut(s)	2735
BglII	AGATCT	2 cut(s)	2133, 2240
BlnI	CCTAGG	1 cut(s)	1981
Bme18I	GGWCC	2 cut(s)	1011, 1192
BmeT110I	CYCGRG	3 cut(s)	164, 590, 607
BmgBI	CACGTC	1 cut(s)	1505
BmgT120I	GGNCC	3 cut(s)	152, 1011, 1192
BmrI	ACTGGG	1 cut(s)	1017
BmsI	GCATC	7 cut(s)	489, 499, 1237, 1312, 1774, 1819, 2499
BmuI	ACTGGG	1 cut(s)	1017
BpiI	GAAGAC	1 cut(s)	1693
BplI	GAGNNNNNCTC	2 cut(s)	519, 551
BpmI	CTGGAG	1 cut(s)	1788
Bpu10I	CCTNAGC	1 cut(s)	262
BpuEI	CTTGAG	5 cut(s)	77, 521, 2504, 2591, 2768
BpuMI	CCSGG	4 cut(s)	465, 591, 592, 2358
BsaAI	YACGTR	1 cut(s)	2794
BsaHI	GRCGYC	1 cut(s)	1095
BsaI	GGTCTC	3 cut(s)	1085, 1376, 1487
BsaWI	WCCGGW	3 cut(s)	286, 560, 1285
BsaXI	ACNNNNNCTCC	6 cut(s)	459, 483, 489, 513, 1761, 1791
Bsc4I	CCNNNNNNNGG	5 cut(s)	225, 226, 1168, 2337, 2658
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	8 cut(s)	68, 296, 1012, 1214, 1546, 1576, 1771, 2149
Bse3DI	GCAATG	4 cut(s)	101, 255, 376, 648
BseBI	CCWGG	6 cut(s)	692, 1099, 1174, 1477, 1878, 2557
BseLI	CCNNNNNNNGG	5 cut(s)	225, 226, 1168, 2337, 2658
BseMI	GCAATG	4 cut(s)	101, 255, 376, 648
BseMII	CTCAG	4 cut(s)	429, 1179, 2235, 2712
BseNI	ACTGG	8 cut(s)	68, 296, 1012, 1214, 1546, 1576, 1771, 2149
BseRI	GAGGAG	2 cut(s)	983, 2094
BseSI	GKGCMC	3 cut(s)	1285, 1510, 2793
BseYI	CCCAGC	2 cut(s)	502, 1789
BsgI	GTGCAG	1 cut(s)	1509
Bsh1236I	CGCG	2 cut(s)	514, 1368
BshFI	GGCC	9 cut(s)	153, 254, 283, 717, 1172, 1452, 1575, 2555, 2738
BshNI	GGYRCC	5 cut(s)	460, 1094, 1263, 2159, 2360
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	2 cut(s)	1285, 1713
BsiHKCI	CYCGRG	3 cut(s)	164, 590, 607
BsiSI	CCGG	6 cut(s)	287, 464, 561, 591, 1286, 2358
BslFI	GGGAC	2 cut(s)	485, 1024
BslI	CCNNNNNNNGG	5 cut(s)	225, 226, 1168, 2337, 2658
BsmAI	GTCTC	5 cut(s)	486, 521, 1085, 1376, 1487
BsmBI	CGTCTC	1 cut(s)	521
BsmFI	GGGAC	2 cut(s)	485, 1024
BsnI	GGCC	9 cut(s)	153, 254, 283, 717, 1172, 1452, 1575, 2555, 2738
Bso31I	GGTCTC	3 cut(s)	1085, 1376, 1487
BsoBI	CYCGRG	3 cut(s)	164, 590, 607
Bsp1286I	GDGCHC	4 cut(s)	1285, 1510, 1713, 2793
Bsp19I	CCATGG	3 cut(s)	903, 1047, 1436
BspACI	CCGC	4 cut(s)	922, 1368, 1576, 1732
BspANI	GGCC	9 cut(s)	153, 254, 283, 717, 1172, 1452, 1575, 2555, 2738
BspCNI	CTCAG	4 cut(s)	430, 1180, 2234, 2713
BspFNI	CGCG	2 cut(s)	514, 1368
BspHI	TCATGA	3 cut(s)	2070, 2175, 2370
BspMAI	CTGCAG	2 cut(s)	379, 2667
BspMI	ACCTGC	1 cut(s)	2459
BspPI	GGATC	3 cut(s)	524, 1463, 2322
BspT107I	GGYRCC	5 cut(s)	460, 1094, 1263, 2159, 2360
BspTNI	GGTCTC	3 cut(s)	1085, 1376, 1487
BsrDI	GCAATG	4 cut(s)	101, 255, 376, 648
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	8 cut(s)	68, 296, 1012, 1214, 1546, 1576, 1771, 2149
BssAI	RCCGGY	1 cut(s)	560
BssNI	GRCGYC	1 cut(s)	1095
BssT1I	CCWWGG	8 cut(s)	411, 903, 1047, 1164, 1436, 1621, 1981, 2155
Bst2UI	CCWGG	6 cut(s)	692, 1099, 1174, 1477, 1878, 2557
Bst4CI	ACNGT	9 cut(s)	321, 619, 889, 1036, 1402, 1487, 2182, 2566, 2854
Bst6I	CTCTTC	3 cut(s)	128, 2112, 2693
BstACI	GRCGYC	1 cut(s)	1095
BstAPI	GCANNNNNTGC	2 cut(s)	371, 2662
BstBAI	YACGTR	1 cut(s)	2794
BstC8I	GCNNGC	5 cut(s)	367, 979, 1310, 2400, 2748
BstDEI	CTNAG	6 cut(s)	262, 419, 438, 1188, 2221, 2721
BstDSI	CCRYGG	3 cut(s)	903, 1047, 1436
BstEII	GGTNACC	1 cut(s)	1544
BstFNI	CGCG	2 cut(s)	514, 1368
BstH2I	RGCGCY	4 cut(s)	942, 1098, 1796, 1854
BstHHI	GCGC	5 cut(s)	514, 941, 1097, 1795, 1853
BstMAI	GTCTC	5 cut(s)	486, 521, 1085, 1376, 1487
BstNI	CCWGG	6 cut(s)	692, 1099, 1174, 1477, 1878, 2557
BstNSI	RCATGY	3 cut(s)	1140, 1343, 1603
BstPI	GGTNACC	1 cut(s)	1544
BstSFI	CTRYAG	3 cut(s)	375, 2485, 2663
BstSLI	GKGCMC	3 cut(s)	1285, 1510, 2793
BstUI	CGCG	2 cut(s)	514, 1368
BstV2I	GAAGAC	1 cut(s)	1693
BstX2I	RGATCY	3 cut(s)	529, 2133, 2240
BstXI	CCANNNNNNTGG	3 cut(s)	291, 778, 2118
BstYI	RGATCY	3 cut(s)	529, 2133, 2240
BsuI	GTATCC	3 cut(s)	813, 1614, 2554
BsuRI	GGCC	9 cut(s)	153, 254, 283, 717, 1172, 1452, 1575, 2555, 2738
BtgI	CCRYGG	3 cut(s)	903, 1047, 1436
BtrI	CACGTC	1 cut(s)	1505
BtsI	GCAGTG	1 cut(s)	1003
BtsIMutI	CAGTG	9 cut(s)	317, 615, 894, 1003, 1492, 1539, 1903, 2142, 2850
BveI	ACCTGC	1 cut(s)	2459
Cac8I	GCNNGC	5 cut(s)	367, 979, 1310, 2400, 2748
CciI	TCATGA	3 cut(s)	2070, 2175, 2370
CfoI	GCGC	5 cut(s)	514, 941, 1097, 1795, 1853
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	3 cut(s)	152, 1011, 1192
Cfr9I	CCCGGG	1 cut(s)	590
CseI	GACGC	3 cut(s)	503, 1133, 1847
CsiI	ACCWGGT	1 cut(s)	690
Csp6I	GTAC	3 cut(s)	461, 823, 2567
CspAI	ACCGGT	1 cut(s)	560
CviQI	GTAC	3 cut(s)	461, 823, 2567
DdeI	CTNAG	6 cut(s)	262, 419, 438, 1188, 2221, 2721
DinI	GGCGCC	1 cut(s)	1096
EaeI	YGGCCR	2 cut(s)	252, 1573
Eam1104I	CTCTTC	3 cut(s)	128, 2112, 2693
EarI	CTCTTC	3 cut(s)	128, 2112, 2693
Eco130I	CCWWGG	8 cut(s)	411, 903, 1047, 1164, 1436, 1621, 1981, 2155
Eco147I	AGGCCT	2 cut(s)	1452, 2555
Eco31I	GGTCTC	3 cut(s)	1085, 1376, 1487
Eco47I	GGWCC	2 cut(s)	1011, 1192
Eco47III	AGCGCT	1 cut(s)	1794
Eco57I	CTGAAG	2 cut(s)	212, 2772
Eco72I	CACGTG	1 cut(s)	2794
Eco88I	CYCGRG	3 cut(s)	164, 590, 607
Eco91I	GGTNACC	1 cut(s)	1544
EcoO109I	RGGNCCY	1 cut(s)	1011
EcoO65I	GGTNACC	1 cut(s)	1544
EcoRI	GAATTC	1 cut(s)	63
EcoRII	CCWGG	6 cut(s)	690, 1097, 1172, 1475, 1876, 2555
EcoT14I	CCWWGG	8 cut(s)	411, 903, 1047, 1164, 1436, 1621, 1981, 2155
EcoT22I	ATGCAT	1 cut(s)	2542
EgeI	GGCGCC	1 cut(s)	1096
EheI	GGCGCC	1 cut(s)	1096
ErhI	CCWWGG	8 cut(s)	411, 903, 1047, 1164, 1436, 1621, 1981, 2155
Esp3I	CGTCTC	1 cut(s)	521
FalI	AAGNNNNNCTT	8 cut(s)	2003, 2035, 2120, 2152, 2326, 2358, 2570, 2602
FaqI	GGGAC	2 cut(s)	485, 1024
FauNDI	CATATG	1 cut(s)	758
FbaI	TGATCA	1 cut(s)	1536
FblI	GTMKAC	2 cut(s)	1038, 2280
FspBI	CTAG	5 cut(s)	443, 791, 1392, 1982, 2760
GlaI	GCGC	5 cut(s)	513, 940, 1096, 1794, 1852
GsaI	CCCAGC	2 cut(s)	506, 1793
GsuI	CTGGAG	1 cut(s)	1788
HaeII	RGCGCY	4 cut(s)	942, 1098, 1796, 1854
HaeIII	GGCC	9 cut(s)	153, 254, 283, 717, 1172, 1452, 1575, 2555, 2738
HapII	CCGG	6 cut(s)	287, 464, 561, 591, 1286, 2358
HgaI	GACGC	3 cut(s)	503, 1133, 1847
HhaI	GCGC	5 cut(s)	514, 941, 1097, 1795, 1853
Hin1I	GRCGYC	1 cut(s)	1095
Hin6I	GCGC	5 cut(s)	512, 939, 1095, 1793, 1851
HinP1I	GCGC	5 cut(s)	512, 939, 1095, 1793, 1851
HincII	GTYRAC	3 cut(s)	52, 697, 1069
HindII	GTYRAC	3 cut(s)	52, 697, 1069
HindIII	AAGCTT	1 cut(s)	1028
HpaII	CCGG	6 cut(s)	287, 464, 561, 591, 1286, 2358
HphI	GGTGA	9 cut(s)	550, 575, 680, 911, 1556, 1637, 2016, 2104, 2488
Hpy99I	CGWCG	1 cut(s)	1506
HpyCH4III	ACNGT	9 cut(s)	321, 619, 889, 1036, 1402, 1487, 2182, 2566, 2854
HpyCH4IV	ACGT	2 cut(s)	1504, 2793
HpyF3I	CTNAG	6 cut(s)	262, 419, 438, 1188, 2221, 2721
HpySE526I	ACGT	2 cut(s)	1504, 2793
Hsp92I	GRCGYC	1 cut(s)	1095
HspAI	GCGC	5 cut(s)	512, 939, 1095, 1793, 1851
KasI	GGCGCC	1 cut(s)	1094
KflI	GGGWCCC	1 cut(s)	1011
KpnI	GGTACC	1 cut(s)	464
Ksp22I	TGATCA	1 cut(s)	1536
LmnI	GCTCC	5 cut(s)	1288, 1848, 1998, 2263, 2770
LweI	GCATC	7 cut(s)	489, 499, 1237, 1312, 1774, 1819, 2499
MabI	ACCWGGT	1 cut(s)	690
MaeI	CTAG	5 cut(s)	443, 791, 1392, 1982, 2760
MaeII	ACGT	2 cut(s)	1504, 2793
MaeIII	GTNAC	4 cut(s)	577, 898, 1544, 2320
MfeI	CAATTG	1 cut(s)	1258
MflI	RGATCY	3 cut(s)	529, 2133, 2240
MhlI	GDGCHC	4 cut(s)	1285, 1510, 1713, 2793
MlsI	TGGCCA	1 cut(s)	254
MluNI	TGGCCA	1 cut(s)	254
Mly113I	GGCGCC	1 cut(s)	1095
MlyI	GAGTC	5 cut(s)	575, 1012, 1575, 1649, 2108
MmeI	TCCRAC	1 cut(s)	1126
Mox20I	TGGCCA	1 cut(s)	254
Mph1103I	ATGCAT	1 cut(s)	2542
MroXI	GAANNNNTTC	1 cut(s)	313
MscI	TGGCCA	1 cut(s)	254
MseI	TTAA	4 cut(s)	1209, 1524, 1530, 2055
MslI	CAYNNNNRTG	7 cut(s)	776, 1485, 1518, 1716, 1755, 2165, 2369
Msp20I	TGGCCA	1 cut(s)	254
MspA1I	CMGCKG	3 cut(s)	506, 2276, 2395
MspI	CCGG	6 cut(s)	287, 464, 561, 591, 1286, 2358
MunI	CAATTG	1 cut(s)	1258
MvaI	CCWGG	6 cut(s)	692, 1099, 1174, 1477, 1878, 2557
MvnI	CGCG	2 cut(s)	514, 1368
NarI	GGCGCC	1 cut(s)	1095
NciI	CCSGG	4 cut(s)	465, 591, 592, 2358
NcoI	CCATGG	3 cut(s)	903, 1047, 1436
NdeI	CATATG	1 cut(s)	758
NmeAIII	GCCGAG	2 cut(s)	1071, 1563
NmuCI	GTSAC	3 cut(s)	577, 1544, 2320
NsiI	ATGCAT	1 cut(s)	2542
NspI	RCATGY	3 cut(s)	1140, 1343, 1603
PaeR7I	CTCGAG	1 cut(s)	164
PagI	TCATGA	3 cut(s)	2070, 2175, 2370
PaqCI	CACCTGC	1 cut(s)	2459
PceI	AGGCCT	2 cut(s)	1452, 2555
PciI	ACATGT	2 cut(s)	1136, 1599
PcsI	WCGNNNNNNNCGW	1 cut(s)	1372
PdmI	GAANNNNTTC	1 cut(s)	313
PfeI	GAWTC	8 cut(s)	139, 187, 214, 868, 1117, 2207, 2442, 2798
PflFI	GACNNNGTC	2 cut(s)	497, 1862
PinAI	ACCGGT	1 cut(s)	560
PleI	GAGTC	5 cut(s)	574, 1012, 1575, 1648, 2108
PluTI	GGCGCC	1 cut(s)	1098
PmaCI	CACGTG	1 cut(s)	2794
PmlI	CACGTG	1 cut(s)	2794
PpsI	GAGTC	5 cut(s)	574, 1012, 1575, 1648, 2108
Ppu21I	YACGTR	1 cut(s)	2794
PpuMI	RGGWCCY	1 cut(s)	1011
PscI	ACATGT	2 cut(s)	1136, 1599
Psp5II	RGGWCCY	1 cut(s)	1011
Psp6I	CCWGG	6 cut(s)	690, 1097, 1172, 1475, 1876, 2555
PspCI	CACGTG	1 cut(s)	2794
PspEI	GGTNACC	1 cut(s)	1544
PspFI	CCCAGC	2 cut(s)	502, 1789
PspGI	CCWGG	6 cut(s)	690, 1097, 1172, 1475, 1876, 2555
PspPI	GGNCC	3 cut(s)	152, 1011, 1192
PspPPI	RGGWCCY	1 cut(s)	1011
PspXI	VCTCGAGB	1 cut(s)	164
PstI	CTGCAG	2 cut(s)	379, 2667
PsuI	RGATCY	3 cut(s)	529, 2133, 2240
PsyI	GACNNNGTC	2 cut(s)	497, 1862
PvuII	CAGCTG	3 cut(s)	506, 2276, 2395
RsaI	GTAC	3 cut(s)	462, 824, 2568
RsaNI	GTAC	3 cut(s)	461, 823, 2567
RseI	CAYNNNNRTG	7 cut(s)	776, 1485, 1518, 1716, 1755, 2165, 2369
SaqAI	TTAA	4 cut(s)	1209, 1524, 1530, 2055
Sau96I	GGNCC	3 cut(s)	152, 1011, 1192
SchI	GAGTC	5 cut(s)	575, 1012, 1575, 1649, 2108
SduI	GDGCHC	4 cut(s)	1285, 1510, 1713, 2793
SexAI	ACCWGGT	1 cut(s)	690
SfaNI	GCATC	7 cut(s)	489, 499, 1237, 1312, 1774, 1819, 2499
SfcI	CTRYAG	3 cut(s)	375, 2485, 2663
SfoI	GGCGCC	1 cut(s)	1096
Sfr274I	CTCGAG	1 cut(s)	164
SgrAI	CRCCGGYG	1 cut(s)	560
SinI	GGWCC	2 cut(s)	1011, 1192
SlaI	CTCGAG	1 cut(s)	164
SmaI	CCCGGG	1 cut(s)	592
SmiMI	CAYNNNNRTG	7 cut(s)	776, 1485, 1518, 1716, 1755, 2165, 2369
SmlI	CTYRAG	6 cut(s)	56, 164, 536, 2519, 2570, 2783
SmoI	CTYRAG	6 cut(s)	56, 164, 536, 2519, 2570, 2783
SpeI	ACTAGT	1 cut(s)	790
SseBI	AGGCCT	2 cut(s)	1452, 2555
SsiI	CCGC	4 cut(s)	922, 1368, 1576, 1732
SspDI	GGCGCC	1 cut(s)	1094
SspMI	CTAG	5 cut(s)	443, 791, 1392, 1982, 2760
StuI	AGGCCT	2 cut(s)	1452, 2555
StyI	CCWWGG	8 cut(s)	411, 903, 1047, 1164, 1436, 1621, 1981, 2155
TaaI	ACNGT	9 cut(s)	321, 619, 889, 1036, 1402, 1487, 2182, 2566, 2854
TaiI	ACGT	2 cut(s)	1507, 2796
TaqI	TCGA	7 cut(s)	165, 351, 1106, 1501, 2326, 2533, 2829
TatI	WGTACW	2 cut(s)	822, 2566
TauI	GCSGC	2 cut(s)	1578, 1735
TfiI	GAWTC	8 cut(s)	139, 187, 214, 868, 1117, 2207, 2442, 2798
Tru1I	TTAA	4 cut(s)	1209, 1524, 1530, 2055
Tru9I	TTAA	4 cut(s)	1209, 1524, 1530, 2055
TscAI	CASTG	9 cut(s)	324, 622, 894, 1003, 1492, 1546, 1903, 2149, 2857
TseFI	GTSAC	3 cut(s)	577, 1544, 2320
Tsp45I	GTSAC	3 cut(s)	577, 1544, 2320
TspDTI	ATGAA	9 cut(s)	138, 316, 612, 1502, 1734, 1949, 2020, 2515, 2765
TspGWI	ACGGA	2 cut(s)	1364, 1850
TspMI	CCCGGG	1 cut(s)	590
TspRI	CASTG	9 cut(s)	324, 622, 894, 1003, 1492, 1546, 1903, 2149, 2857
Tth111I	GACNNNGTC	2 cut(s)	497, 1862
VneI	GTGCAC	1 cut(s)	1281
VpaK11BI	GGWCC	2 cut(s)	1011, 1192
XapI	RAATTY	1 cut(s)	63
XceI	RCATGY	3 cut(s)	1140, 1343, 1603
XcmI	CCANNNNNNNNNTGG	2 cut(s)	970, 1556
XhoI	CTCGAG	1 cut(s)	164
XmaI	CCCGGG	1 cut(s)	590
XmaJI	CCTAGG	1 cut(s)	1981
XmiI	GTMKAC	2 cut(s)	1038, 2280
XmnI	GAANNNNTTC	1 cut(s)	313
XspI	CTAG	5 cut(s)	443, 791, 1392, 1982, 2760
Zsp2I	ATGCAT	1 cut(s)	2542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.