cyclic nucleotide-gated ion channel
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G15990 AT1G19780 AT1G19780 |
| fragaria_vesca | FvH4_6g28560 FvH4_6g28560 |
| malus_domestica | MD05G1041200.v1.1 |
| prunus_persica | Prupe.3G099200_v2.0.a1 |
| pyrus_communis | pycom05g03400 |
| rosa_chinensis | RchiOBHm_Chr2g0132901 |
| rosa_laevigata | RLG00000019289 |
| rosa_multiflora | Rmu_sc0001314.1_g000002 Rmu_sc0016946.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00111640 |
| rosa_rugosa | Rorug02G0308100 |
| rosa_samantha | Rh2AG360700 Rh2BG366600 Rh2CG343900 Rh2DG383600 |
| rosa_wichuraiana | Rw2G029330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2147 |
| AccB1I | GGYRCC | 2 cut(s) | 1516, 1965 |
| AccBSI | CCGCTC | 1 cut(s) | 1543 |
| AccI | GTMKAC | 1 cut(s) | 618 |
| AccII | CGCG | 1 cut(s) | 2136 |
| AccIII | TCCGGA | 1 cut(s) | 1449 |
| AciI | CCGC | 8 cut(s) | 466, 604, 751, 913, 1543, 1609, 2070, 2136 |
| AclWI | GGATC | 4 cut(s) | 214, 371, 1754, 1767 |
| AcoI | YGGCCR | 2 cut(s) | 37, 1174 |
| AcsI | RAATTY | 8 cut(s) | 50, 195, 766, 1115, 1127, 1159, 1501, 1853 |
| AcuI | CTGAAG | 2 cut(s) | 1062, 1271 |
| AcyI | GRCGYC | 2 cut(s) | 1966, 2146 |
| AfaI | GTAC | 5 cut(s) | 878, 959, 1168, 1195, 1901 |
| AfeI | AGCGCT | 1 cut(s) | 896 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 149, 1750, 1926 |
| AgsI | TTSAA | 9 cut(s) | 187, 731, 929, 1095, 1187, 1501, 1699, 1852, 2076 |
| AjnI | CCWGG | 3 cut(s) | 872, 982, 1176 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1118, 1150 |
| Alw21I | GWGCWC | 1 cut(s) | 1743 |
| Alw26I | GTCTC | 4 cut(s) | 1296, 1310, 1412, 1716 |
| AlwI | GGATC | 4 cut(s) | 214, 371, 1754, 1767 |
| Ama87I | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| Aor13HI | TCCGGA | 1 cut(s) | 1449 |
| Aor51HI | AGCGCT | 1 cut(s) | 896 |
| AoxI | GGCC | 4 cut(s) | 37, 813, 1174, 1240 |
| ApeKI | GCWGC | 8 cut(s) | 446, 821, 851, 869, 1032, 1958, 2120, 2206 |
| ApoI | RAATTY | 8 cut(s) | 50, 195, 766, 1115, 1127, 1159, 1501, 1853 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1386 |
| AspLEI | GCGC | 2 cut(s) | 897, 1968 |
| AspS9I | GGNCC | 2 cut(s) | 813, 1618 |
| AsuC2I | CCSGG | 2 cut(s) | 269, 817 |
| AsuHPI | GGTGA | 4 cut(s) | 244, 569, 1058, 1640 |
| AvaI | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| AvaII | GGWCC | 1 cut(s) | 1618 |
| BalI | TGGCCA | 2 cut(s) | 39, 1176 |
| BamHI | GGATCC | 1 cut(s) | 1759 |
| BanI | GGYRCC | 2 cut(s) | 1516, 1965 |
| BanII | GRGCYC | 1 cut(s) | 1743 |
| BbsI | GAAGAC | 1 cut(s) | 1448 |
| Bbv12I | GWGCWC | 1 cut(s) | 1743 |
| BbvI | GCAGC | 8 cut(s) | 458, 808, 838, 856, 1019, 1945, 2132, 2193 |
| BccI | CCATC | 4 cut(s) | 541, 1362, 1670, 1792 |
| BceAI | ACGGC | 1 cut(s) | 1502 |
| BciT130I | CCWGG | 3 cut(s) | 874, 984, 1178 |
| BciVI | GTATCC | 1 cut(s) | 980 |
| BcnI | CCSGG | 2 cut(s) | 269, 817 |
| BcoDI | GTCTC | 4 cut(s) | 1296, 1310, 1412, 1716 |
| BfaI | CTAG | 3 cut(s) | 758, 1658, 1770 |
| BfmI | CTRYAG | 4 cut(s) | 888, 1972, 2026, 2207 |
| BfoI | RGCGCY | 2 cut(s) | 898, 1969 |
| BfuAI | ACCTGC | 1 cut(s) | 2147 |
| BfuI | GTATCC | 1 cut(s) | 980 |
| BglII | AGATCT | 3 cut(s) | 274, 1372, 1465 |
| BisI | GCNGC | 8 cut(s) | 447, 822, 852, 870, 1033, 1959, 2121, 2207 |
| BlsI | GCNGC | 8 cut(s) | 448, 823, 853, 871, 1034, 1960, 2122, 2208 |
| Bme1390I | CCNGG | 5 cut(s) | 269, 817, 874, 984, 1178 |
| Bme18I | GGWCC | 1 cut(s) | 1618 |
| BmeT110I | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| BmgT120I | GGNCC | 2 cut(s) | 813, 1618 |
| BmiI | GGNNCC | 5 cut(s) | 1518, 1619, 1620, 1761, 1967 |
| BmrFI | CCNGG | 5 cut(s) | 269, 817, 874, 984, 1178 |
| BmrI | ACTGGG | 4 cut(s) | 159, 255, 873, 1616 |
| BmsI | GCATC | 8 cut(s) | 469, 1115, 1338, 1498, 1543, 1885, 1949, 2117 |
| BmuI | ACTGGG | 4 cut(s) | 159, 255, 873, 1616 |
| BpiI | GAAGAC | 1 cut(s) | 1448 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1725, 1757 |
| BpuEI | CTTGAG | 1 cut(s) | 840 |
| BpuMI | CCSGG | 2 cut(s) | 269, 817 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2061 |
| BsaHI | GRCGYC | 2 cut(s) | 1966, 2146 |
| BsaJI | CCNNGG | 3 cut(s) | 816, 982, 1177 |
| BsaWI | WCCGGW | 1 cut(s) | 1449 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 149, 1750, 1926 |
| Bse1I | ACTGG | 7 cut(s) | 102, 154, 250, 868, 1191, 1622, 1867 |
| Bse3DI | GCAATG | 2 cut(s) | 707, 1101 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2061 |
| BseAI | TCCGGA | 1 cut(s) | 1449 |
| BseBI | CCWGG | 3 cut(s) | 874, 984, 1178 |
| BseDI | CCNNGG | 3 cut(s) | 816, 982, 1177 |
| BseGI | GGATG | 8 cut(s) | 70, 1106, 1245, 1353, 1543, 1940, 1950, 2108 |
| BseJI | GATNNNNATC | 1 cut(s) | 2061 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 149, 1750, 1926 |
| BseMI | GCAATG | 2 cut(s) | 707, 1101 |
| BseMII | CTCAG | 4 cut(s) | 1329, 1483, 1806, 2247 |
| BseNI | ACTGG | 7 cut(s) | 102, 154, 250, 868, 1191, 1622, 1867 |
| BseRI | GAGGAG | 4 cut(s) | 1325, 1451, 1859, 2021 |
| BseXI | GCAGC | 8 cut(s) | 458, 808, 838, 856, 1019, 1945, 2132, 2193 |
| BseYI | CCCAGC | 1 cut(s) | 1920 |
| BsgI | GTGCAG | 4 cut(s) | 279, 807, 1018, 2175 |
| Bsh1236I | CGCG | 1 cut(s) | 2136 |
| BshFI | GGCC | 4 cut(s) | 39, 815, 1176, 1242 |
| BshNI | GGYRCC | 2 cut(s) | 1516, 1965 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1743 |
| BsiHKCI | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| BsiSI | CCGG | 3 cut(s) | 269, 816, 1450 |
| BslFI | GGGAC | 4 cut(s) | 304, 1164, 1490, 1631 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 149, 1750, 1926 |
| BsmAI | GTCTC | 4 cut(s) | 1296, 1310, 1412, 1716 |
| BsmBI | CGTCTC | 1 cut(s) | 1310 |
| BsmFI | GGGAC | 4 cut(s) | 304, 1164, 1490, 1631 |
| BsnI | GGCC | 4 cut(s) | 39, 815, 1176, 1242 |
| BsoBI | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1743 |
| Bsp13I | TCCGGA | 1 cut(s) | 1449 |
| Bsp143I | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| BspACI | CCGC | 8 cut(s) | 466, 604, 751, 913, 1543, 1609, 2070, 2136 |
| BspANI | GGCC | 4 cut(s) | 39, 815, 1176, 1242 |
| BspCNI | CTCAG | 4 cut(s) | 1330, 1482, 1807, 2246 |
| BspEI | TCCGGA | 1 cut(s) | 1449 |
| BspFNI | CGCG | 1 cut(s) | 2136 |
| BspLI | GGNNCC | 5 cut(s) | 1518, 1619, 1620, 1761, 1967 |
| BspMAI | CTGCAG | 1 cut(s) | 2211 |
| BspMI | ACCTGC | 1 cut(s) | 2147 |
| BspPI | GGATC | 4 cut(s) | 214, 371, 1754, 1767 |
| BspQI | GCTCTTC | 1 cut(s) | 1731 |
| BspT107I | GGYRCC | 2 cut(s) | 1516, 1965 |
| BsrBI | CCGCTC | 1 cut(s) | 1543 |
| BsrDI | GCAATG | 2 cut(s) | 707, 1101 |
| BsrI | ACTGG | 7 cut(s) | 102, 154, 250, 868, 1191, 1622, 1867 |
| BssECI | CCNNGG | 3 cut(s) | 816, 982, 1177 |
| BssMI | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| BssNI | GRCGYC | 2 cut(s) | 1966, 2146 |
| Bst2UI | CCWGG | 3 cut(s) | 874, 984, 1178 |
| Bst4CI | ACNGT | 5 cut(s) | 463, 510, 962, 1703, 1801 |
| Bst6I | CTCTTC | 2 cut(s) | 547, 1731 |
| BstACI | GRCGYC | 2 cut(s) | 1966, 2146 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1348 |
| BstC8I | GCNNGC | 6 cut(s) | 790, 849, 911, 1361, 1864, 2087 |
| BstDEI | CTNAG | 7 cut(s) | 442, 1338, 1376, 1469, 1815, 1834, 2233 |
| BstEII | GGTNACC | 1 cut(s) | 250 |
| BstF5I | GGATG | 8 cut(s) | 70, 1106, 1245, 1353, 1543, 1940, 1950, 2108 |
| BstFNI | CGCG | 1 cut(s) | 2136 |
| BstH2I | RGCGCY | 2 cut(s) | 898, 1969 |
| BstHHI | GCGC | 2 cut(s) | 897, 1968 |
| BstKTI | GATC | 7 cut(s) | 209, 277, 379, 1375, 1402, 1468, 1762 |
| BstMAI | GTCTC | 4 cut(s) | 1296, 1310, 1412, 1716 |
| BstMBI | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| BstNI | CCWGG | 3 cut(s) | 874, 984, 1178 |
| BstNSI | RCATGY | 1 cut(s) | 909 |
| BstPI | GGTNACC | 1 cut(s) | 250 |
| BstSCI | CCNGG | 5 cut(s) | 267, 815, 872, 982, 1176 |
| BstSFI | CTRYAG | 4 cut(s) | 888, 1972, 2026, 2207 |
| BstUI | CGCG | 1 cut(s) | 2136 |
| BstV1I | GCAGC | 8 cut(s) | 458, 808, 838, 856, 1019, 1945, 2132, 2193 |
| BstV2I | GAAGAC | 1 cut(s) | 1448 |
| BstX2I | RGATCY | 4 cut(s) | 274, 1372, 1465, 1759 |
| BstYI | RGATCY | 4 cut(s) | 274, 1372, 1465, 1759 |
| BsuI | GTATCC | 1 cut(s) | 980 |
| BsuRI | GGCC | 4 cut(s) | 39, 815, 1176, 1242 |
| BtgZI | GCGATG | 1 cut(s) | 1340 |
| BtsCI | GGATG | 8 cut(s) | 70, 1106, 1245, 1353, 1543, 1940, 1950, 2108 |
| BtsI | GCAGTG | 5 cut(s) | 267, 1035, 1349, 1931, 2158 |
| BtsIMutI | CAGTG | 7 cut(s) | 267, 861, 1035, 1349, 1708, 1931, 2158 |
| BveI | ACCTGC | 1 cut(s) | 2147 |
| Cac8I | GCNNGC | 6 cut(s) | 790, 849, 911, 1361, 1864, 2087 |
| CfoI | GCGC | 2 cut(s) | 897, 1968 |
| Cfr13I | GGNCC | 2 cut(s) | 813, 1618 |
| CseI | GACGC | 3 cut(s) | 1401, 1556, 2135 |
| Csp6I | GTAC | 5 cut(s) | 877, 958, 1167, 1194, 1900 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1391, 1426, 2086, 2121 |
| CviAII | CATG | 7 cut(s) | 354, 499, 671, 906, 1749, 2173, 2182 |
| CviQI | GTAC | 5 cut(s) | 877, 958, 1167, 1194, 1900 |
| DdeI | CTNAG | 7 cut(s) | 442, 1338, 1376, 1469, 1815, 1834, 2233 |
| DinI | GGCGCC | 1 cut(s) | 1967 |
| DpnI | GATC | 7 cut(s) | 208, 276, 378, 1374, 1401, 1467, 1761 |
| DpnII | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| DraI | TTTAAA | 1 cut(s) | 765 |
| EaeI | YGGCCR | 2 cut(s) | 37, 1174 |
| Eam1104I | CTCTTC | 2 cut(s) | 547, 1731 |
| EarI | CTCTTC | 2 cut(s) | 547, 1731 |
| Ecl136II | GAGCTC | 1 cut(s) | 1741 |
| Eco24I | GRGCYC | 1 cut(s) | 1743 |
| Eco32I | GATATC | 2 cut(s) | 596, 1006 |
| Eco47I | GGWCC | 1 cut(s) | 1618 |
| Eco47III | AGCGCT | 1 cut(s) | 896 |
| Eco53kI | GAGCTC | 1 cut(s) | 1741 |
| Eco57I | CTGAAG | 2 cut(s) | 1062, 1271 |
| Eco88I | CYCGRG | 3 cut(s) | 540, 1307, 1422 |
| Eco91I | GGTNACC | 1 cut(s) | 250 |
| EcoICRI | GAGCTC | 1 cut(s) | 1741 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1618 |
| EcoO65I | GGTNACC | 1 cut(s) | 250 |
| EcoRI | GAATTC | 1 cut(s) | 195 |
| EcoRII | CCWGG | 3 cut(s) | 872, 982, 1176 |
| EcoRV | GATATC | 2 cut(s) | 596, 1006 |
| EcoT38I | GRGCYC | 1 cut(s) | 1743 |
| EgeI | GGCGCC | 1 cut(s) | 1967 |
| EheI | GGCGCC | 1 cut(s) | 1967 |
| Esp3I | CGTCTC | 1 cut(s) | 1310 |
| FaeI | CATG | 7 cut(s) | 357, 502, 674, 909, 1752, 2176, 2185 |
| FaqI | GGGAC | 4 cut(s) | 304, 1164, 1490, 1631 |
| FatI | CATG | 7 cut(s) | 353, 498, 670, 905, 1748, 2172, 2181 |
| FauI | CCCGC | 2 cut(s) | 906, 1602 |
| FblI | GTMKAC | 1 cut(s) | 618 |
| Fnu4HI | GCNGC | 8 cut(s) | 447, 822, 852, 870, 1033, 1959, 2121, 2207 |
| FokI | GGATG | 8 cut(s) | 77, 1093, 1232, 1360, 1550, 1927, 1937, 2095 |
| FriOI | GRGCYC | 1 cut(s) | 1743 |
| Fsp4HI | GCNGC | 8 cut(s) | 447, 822, 852, 870, 1033, 1959, 2121, 2207 |
| FspBI | CTAG | 3 cut(s) | 758, 1658, 1770 |
| GlaI | GCGC | 2 cut(s) | 896, 1967 |
| GluI | GCNGC | 8 cut(s) | 447, 822, 852, 870, 1033, 1959, 2121, 2207 |
| GsaI | CCCAGC | 1 cut(s) | 1924 |
| HaeII | RGCGCY | 2 cut(s) | 898, 1969 |
| HaeIII | GGCC | 4 cut(s) | 39, 815, 1176, 1242 |
| HapII | CCGG | 3 cut(s) | 269, 816, 1450 |
| HgaI | GACGC | 3 cut(s) | 1401, 1556, 2135 |
| HhaI | GCGC | 2 cut(s) | 897, 1968 |
| Hin1I | GRCGYC | 2 cut(s) | 1966, 2146 |
| Hin1II | CATG | 7 cut(s) | 357, 502, 674, 909, 1752, 2176, 2185 |
| Hin6I | GCGC | 2 cut(s) | 895, 1966 |
| HinP1I | GCGC | 2 cut(s) | 895, 1966 |
| HincII | GTYRAC | 1 cut(s) | 619 |
| HindII | GTYRAC | 1 cut(s) | 619 |
| HindIII | AAGCTT | 1 cut(s) | 2087 |
| HinfI | GANTC | 9 cut(s) | 74, 572, 663, 1071, 1210, 1300, 1334, 1420, 1453 |
| HpaII | CCGG | 3 cut(s) | 269, 816, 1450 |
| HphI | GGTGA | 4 cut(s) | 244, 569, 1058, 1640 |
| Hpy166II | GTNNAC | 4 cut(s) | 560, 619, 1169, 1902 |
| Hpy188III | TCNNGA | 4 cut(s) | 1184, 1297, 1307, 1450 |
| Hpy8I | GTNNAC | 4 cut(s) | 560, 619, 1169, 1902 |
| Hpy99I | CGWCG | 2 cut(s) | 1395, 2151 |
| HpyCH4III | ACNGT | 5 cut(s) | 463, 510, 962, 1703, 1801 |
| HpyF3I | CTNAG | 7 cut(s) | 442, 1338, 1376, 1469, 1815, 1834, 2233 |
| Hsp92I | GRCGYC | 2 cut(s) | 1966, 2146 |
| Hsp92II | CATG | 7 cut(s) | 357, 502, 674, 909, 1752, 2176, 2185 |
| HspAI | GCGC | 2 cut(s) | 895, 1966 |
| KasI | GGCGCC | 1 cut(s) | 1965 |
| KflI | GGGWCCC | 1 cut(s) | 1618 |
| Kpn2I | TCCGGA | 1 cut(s) | 1449 |
| Kzo9I | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| LguI | GCTCTTC | 1 cut(s) | 1731 |
| LmnI | GCTCC | 2 cut(s) | 1746, 2194 |
| Lsp1109I | GCAGC | 8 cut(s) | 458, 808, 838, 856, 1019, 1945, 2132, 2193 |
| LweI | GCATC | 8 cut(s) | 469, 1115, 1338, 1498, 1543, 1885, 1949, 2117 |
| MaeI | CTAG | 3 cut(s) | 758, 1658, 1770 |
| MaeIII | GTNAC | 7 cut(s) | 14, 21, 250, 859, 1046, 1331, 1666 |
| MalI | GATC | 7 cut(s) | 208, 276, 378, 1374, 1401, 1467, 1761 |
| MbiI | CCGCTC | 1 cut(s) | 1543 |
| MboI | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| MflI | RGATCY | 4 cut(s) | 274, 1372, 1465, 1759 |
| MhlI | GDGCHC | 1 cut(s) | 1743 |
| MlsI | TGGCCA | 2 cut(s) | 39, 1176 |
| MluNI | TGGCCA | 2 cut(s) | 39, 1176 |
| Mly113I | GGCGCC | 1 cut(s) | 1966 |
| MlyI | GAGTC | 4 cut(s) | 68, 1328, 1414, 1462 |
| MmeI | TCCRAC | 2 cut(s) | 1395, 1664 |
| Mox20I | TGGCCA | 2 cut(s) | 39, 1176 |
| MroI | TCCGGA | 1 cut(s) | 1449 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1386 |
| MscI | TGGCCA | 2 cut(s) | 39, 1176 |
| MseI | TTAA | 9 cut(s) | 239, 279, 764, 777, 1023, 1062, 1163, 1323, 1482 |
| Msp20I | TGGCCA | 2 cut(s) | 39, 1176 |
| MspI | CCGG | 3 cut(s) | 269, 816, 1450 |
| MspR9I | CCNGG | 5 cut(s) | 269, 817, 874, 984, 1178 |
| MvaI | CCWGG | 3 cut(s) | 874, 984, 1178 |
| MvnI | CGCG | 1 cut(s) | 2136 |
| NarI | GGCGCC | 1 cut(s) | 1966 |
| NciI | CCSGG | 2 cut(s) | 269, 817 |
| NdeII | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| NlaIII | CATG | 7 cut(s) | 357, 502, 674, 909, 1752, 2176, 2185 |
| NlaIV | GGNNCC | 5 cut(s) | 1518, 1619, 1620, 1761, 1967 |
| NmuCI | GTSAC | 6 cut(s) | 21, 250, 859, 1046, 1331, 1666 |
| NspI | RCATGY | 1 cut(s) | 909 |
| PaeR7I | CTCGAG | 2 cut(s) | 1307, 1422 |
| PciSI | GCTCTTC | 1 cut(s) | 1731 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1386 |
| PfeI | GAWTC | 5 cut(s) | 572, 663, 1071, 1210, 1300 |
| PfoI | TCCNGGA | 1 cut(s) | 267 |
| PkrI | GCNGC | 8 cut(s) | 448, 823, 853, 871, 1034, 1960, 2122, 2208 |
| PleI | GAGTC | 4 cut(s) | 68, 1328, 1414, 1461 |
| PluTI | GGCGCC | 1 cut(s) | 1969 |
| PpsI | GAGTC | 4 cut(s) | 68, 1328, 1414, 1461 |
| PpuMI | RGGWCCY | 1 cut(s) | 1618 |
| Psp124BI | GAGCTC | 1 cut(s) | 1743 |
| Psp5II | RGGWCCY | 1 cut(s) | 1618 |
| Psp6I | CCWGG | 3 cut(s) | 872, 982, 1176 |
| PspEI | GGTNACC | 1 cut(s) | 250 |
| PspFI | CCCAGC | 1 cut(s) | 1920 |
| PspGI | CCWGG | 3 cut(s) | 872, 982, 1176 |
| PspN4I | GGNNCC | 5 cut(s) | 1518, 1619, 1620, 1761, 1967 |
| PspPI | GGNCC | 2 cut(s) | 813, 1618 |
| PspPPI | RGGWCCY | 1 cut(s) | 1618 |
| PspXI | VCTCGAGB | 1 cut(s) | 1422 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 925, 957 |
| PstI | CTGCAG | 1 cut(s) | 2211 |
| PsuI | RGATCY | 4 cut(s) | 274, 1372, 1465, 1759 |
| RsaI | GTAC | 5 cut(s) | 878, 959, 1168, 1195, 1901 |
| RsaNI | GTAC | 5 cut(s) | 877, 958, 1167, 1194, 1900 |
| SacI | GAGCTC | 1 cut(s) | 1743 |
| SalI | GTCGAC | 1 cut(s) | 617 |
| SapI | GCTCTTC | 1 cut(s) | 1731 |
| SaqAI | TTAA | 9 cut(s) | 239, 279, 764, 777, 1023, 1062, 1163, 1323, 1482 |
| SatI | GCNGC | 8 cut(s) | 447, 822, 852, 870, 1033, 1959, 2121, 2207 |
| Sau3AI | GATC | 7 cut(s) | 206, 274, 376, 1372, 1399, 1465, 1759 |
| Sau96I | GGNCC | 2 cut(s) | 813, 1618 |
| SchI | GAGTC | 4 cut(s) | 68, 1328, 1414, 1462 |
| ScrFI | CCNGG | 5 cut(s) | 269, 817, 874, 984, 1178 |
| SduI | GDGCHC | 1 cut(s) | 1743 |
| SfaNI | GCATC | 8 cut(s) | 469, 1115, 1338, 1498, 1543, 1885, 1949, 2117 |
| SfcI | CTRYAG | 4 cut(s) | 888, 1972, 2026, 2207 |
| SfoI | GGCGCC | 1 cut(s) | 1967 |
| Sfr274I | CTCGAG | 2 cut(s) | 1307, 1422 |
| SinI | GGWCC | 1 cut(s) | 1618 |
| SlaI | CTCGAG | 2 cut(s) | 1307, 1422 |
| SmlI | CTYRAG | 3 cut(s) | 855, 1307, 1422 |
| SmoI | CTYRAG | 3 cut(s) | 855, 1307, 1422 |
| SsiI | CCGC | 8 cut(s) | 466, 604, 751, 913, 1543, 1609, 2070, 2136 |
| SspDI | GGCGCC | 1 cut(s) | 1965 |
| SspMI | CTAG | 3 cut(s) | 758, 1658, 1770 |
| SstI | GAGCTC | 1 cut(s) | 1743 |
| StyD4I | CCNGG | 5 cut(s) | 267, 815, 872, 982, 1176 |
| TaaI | ACNGT | 5 cut(s) | 463, 510, 962, 1703, 1801 |
| TaqI | TCGA | 9 cut(s) | 86, 405, 618, 944, 1308, 1390, 1423, 1795, 2065 |
| TatI | WGTACW | 3 cut(s) | 957, 1166, 1899 |
| TfiI | GAWTC | 5 cut(s) | 572, 663, 1071, 1210, 1300 |
| Tru1I | TTAA | 9 cut(s) | 239, 279, 764, 777, 1023, 1062, 1163, 1323, 1482 |
| Tru9I | TTAA | 9 cut(s) | 239, 279, 764, 777, 1023, 1062, 1163, 1323, 1482 |
| TscAI | CASTG | 7 cut(s) | 267, 868, 1042, 1349, 1708, 1931, 2158 |
| TseFI | GTSAC | 6 cut(s) | 21, 250, 859, 1046, 1331, 1666 |
| TseI | GCWGC | 8 cut(s) | 446, 821, 851, 869, 1032, 1958, 2120, 2206 |
| Tsp45I | GTSAC | 6 cut(s) | 21, 250, 859, 1046, 1331, 1666 |
| TspDTI | ATGAA | 6 cut(s) | 116, 125, 1630, 1871, 1939, 2216 |
| TspGWI | ACGGA | 4 cut(s) | 228, 619, 1898, 2207 |
| TspRI | CASTG | 7 cut(s) | 267, 868, 1042, 1349, 1708, 1931, 2158 |
| VpaK11BI | GGWCC | 1 cut(s) | 1618 |
| XapI | RAATTY | 8 cut(s) | 50, 195, 766, 1115, 1127, 1159, 1501, 1853 |
| XceI | RCATGY | 1 cut(s) | 909 |
| XhoI | CTCGAG | 2 cut(s) | 1307, 1422 |
| XmiI | GTMKAC | 1 cut(s) | 618 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1386 |
| XspI | CTAG | 3 cut(s) | 758, 1658, 1770 |