Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0011651

Physical Location & Seq

Genomic Coordinates Forward (+)

46246255 .. 46251657

Gene Structure 5403 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG343900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGTACAAGTCGCAGTTTATTGGAGGTCAGAAAGAGAAATTTGTGAGGTTAGATGATTTGGATTCTACAACGTCAATGAGTTCAGATACTGGTAAAGTGAAGAAATGTGGATTTAATATAGAGGGACTGGCTTTTACTGATCGTAGAAAAAGACAATCAAAGTCCGTTAATTTTGGATTTCCGAGGGGATCAGATGGACTAAAGACATTTGGTAGATCAATTAGAACTGGGGTCAGCCGTGCAGTGTTTCCAGAAGATCTTAAAGTTTCGGATAAAAGGATATTTGATCCACAAGACAAGTCCCTCCTGTTATGGAACAGGCTTTTTGTCATAGCATGTATCTTTGCTATATCCATTGATCCTCTGTTCTTTTATCTCCCGATATTCGATCAAGAGCAGGAATGCCTCTCTATCGATAGAAGAGTAGCAACAACATCTTTAACTATGCGATCTTTAATAGATGTTTTCTACCTTTTGCGCATGGCTTTACAGTTTCGTACAGCTTATATTGCACCATCATCTCGGGTGTTCGGAAGAGGTGAACTTGTGATAGATACTTCACAGATAGCACAGCGATATCTACACCGTTACTTCTTTGTTGATCTTGCTTCTGTGCTGCCCGTACCACAGATTGTGGTTTTTATATACTTGCACGGAAATGGTGCAGCAGTACTGTCTACGAAACAAGCATTGCTATATGTTGTCTGGGTTCAGTTACTGCCAAGATTTGCCCGCTTGCTAGCTTTAAACTCAGACCTTAAGAAGAGTGCGGGTTCTTTCGCCGAAAGTGCTTGGGCTGGGGCTGCATACTATTTGCTTTGGTTTATGCTTGCTGCTCAAGTCACTGGGGCTGCCTGGTACTTATTAGCTGTAGAACGATATGACACATGCTGGCGGGAAGCTTGTCACAAGAGTGGAAAATGTCGAGTAGAATTTTTGTATTGTGGCAGTGAGGGAATGAAGGGATACAATGAGTGGGGCAAAATCAAGGGGGATGTTCTAAAAAATAGCTGCAGCGGTTCAGATGATGACCCCGATGGCTTTAACTTTGGAATCTTCAAAAACGCTGTATCTTCAGGAGTTATTTCATCGACTGTCTTTTTCGAAAAGTTTTTATACTGCTTGTGGTTTGGATTAAAAAGTTTAAGTACGCTTGGCCAGGGGCTTGAGACCTCTACCTATTATCTGGAGAATATATTTTCCATATGGATAGGCATTTTTGGCCTCATCCTGTTTGCCCTTCTGATTGGAAATATACAGACCTATCTTCAGTCTCTCACAATTCGTCTTGAGGAGATGAGGATTAAAAGGCGTGACTCTGAGCAGTGGATGCACCATCGCTGGCTTCCACAGGATCTTAGAGAAAGGGTTCGGCGCTACGATCAATATAAATGGTTGGAGACTCGAGGTGTAGATGAGGAGAGCATTGTCCAGACTCTCCCAAAAGATCTCAGGAGGGACATTAAACGGCATCTCTGCTTGAATTTGGTCAGAAGGGTGCCTCTTTTCGCCAATATGGATGAGCGGTTGCTTGATGCGATCTGTGAACGTCTGAAACCAAGTTTATGCACAGAGAGTACATTTATAGTCCGGGAAGGGGACCCTGTTGTTGAGATGTTATTCATCATACGTGGTCGCCTAGAAAGTGTAACCACAGATGGTGGTAGGAGTGGATTTTACAACAGTGGTTTGCTCCAGGAAGGTGACTTTTGTGGAGAAGAGCTCCTAACATGGGCACTGGACCCGAAAGCAGGCTCTAACTTACCATCATCTACTCGAACAGTGAAGGCTTTAACTGAGGTTGAGGCATTTGCTTTGGAAGCAGAGGAGTTGAAATTTGTTGCCAGTCAGTTTAGGCACCTTCATAGCAGACAGGTTCAGTACACCTTCCGGTTTTACTCACAGCAATGGAGGACTTGGGCGGCCTGCTTTATCCAAGCTGCTTGGCGCCACTACAGGAGAAAAGTGGCGGCAGAAAAACAAAGAGAGGAGGAATTTGGATACAGTGATGGAGATGATGATGGTGGTGGTGGTGGTGGTGGTGGCGGCGGTGATTTTAAAAGCGGTTCTGGTAAATATGCGCTTGGTGCCGCAGTCTTTGCATCCCGCTTTGCAGCAAATGCTCTTCGTGGTCATAGGCTTCGCAGTGAAAGCACCAGGGGGCTACTGCTGCAGAAGCCCTCTGAACCTGACTTCTCGGCTTATGATGATAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016049 GO:0022414 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032989 GO:0034220 GO:0040007 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0046873 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055085 GO:0060560 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

738

Amino Acids

83.93

Weight (kDa)

8.9

Isoelectric Point (pI)

49.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	105 - 428	6.3e-19	Ion transport protein
cNMP_binding	PF00027	527 - 613	2.8e-06	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15990 AT1G19780 AT1G19780
fragaria_vesca	FvH4_6g28560 FvH4_6g28560
malus_domestica	MD05G1041200.v1.1
prunus_persica	Prupe.3G099200_v2.0.a1
pyrus_communis	pycom05g03400
rosa_chinensis	RchiOBHm_Chr2g0132901
rosa_laevigata	RLG00000019289
rosa_multiflora	Rmu_sc0001314.1_g000002 Rmu_sc0016946.1_g000003
rosa_roxburghii	Rroxscaffold_2G00111640
rosa_rugosa	Rorug02G0308100
rosa_samantha	Rh2AG360700 Rh2BG366600 Rh2CG343900 Rh2DG383600
rosa_wichuraiana	Rw2G029330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	479
AccB1I	GGYRCC	4 cut(s)	1498, 1857, 1947, 2087
AccBSI	CCGCTC	1 cut(s)	1525
AccI	GTMKAC	1 cut(s)	677
AclWI	GGATC	4 cut(s)	196, 281, 353, 1362
AcoI	YGGCCR	1 cut(s)	1156
AcsI	RAATTY	5 cut(s)	38, 932, 1483, 1835, 1994
AcuI	CTGAAG	2 cut(s)	1059, 1253
AcyI	GRCGYC	1 cut(s)	1948
AfaI	GTAC	8 cut(s)	5, 499, 624, 672, 860, 1150, 1579, 1883
AfiI	CCNNNNNNNGG	3 cut(s)	1597, 1732, 1751
AflII	CTTAAG	1 cut(s)	758
AgsI	TTSAA	3 cut(s)	1060, 1483, 1834
AjnI	CCWGG	4 cut(s)	854, 1158, 1695, 2156
AleI	CACNNNNGTG	1 cut(s)	912
AluBI	AGCT	7 cut(s)	503, 743, 869, 902, 1011, 1723, 1940
AluI	AGCT	7 cut(s)	503, 743, 869, 902, 1011, 1723, 1940
Alw21I	GWGCWC	1 cut(s)	1725
Alw26I	GTCTC	3 cut(s)	1163, 1278, 1394
AlwI	GGATC	4 cut(s)	196, 281, 353, 1362
AlwNI	CAGNNNCTG	2 cut(s)	89, 718
Ama87I	CYCGRG	2 cut(s)	522, 1404
AoxI	GGCC	3 cut(s)	1156, 1222, 1923
ApoI	RAATTY	5 cut(s)	38, 932, 1483, 1835, 1994
Asp700I	GAANNNNTTC	1 cut(s)	1368
AspLEI	GCGC	4 cut(s)	480, 1377, 1950, 2083
AspS9I	GGNCC	2 cut(s)	1600, 1741
AsuC2I	CCSGG	1 cut(s)	1592
AsuHPI	GGTGA	3 cut(s)	551, 1715, 2063
AsuII	TTCGAA	1 cut(s)	1104
AsuNHI	GCTAGC	1 cut(s)	739
AvaI	CYCGRG	2 cut(s)	522, 1404
AvaII	GGWCC	2 cut(s)	1600, 1741
BaeGI	GKGCMC	1 cut(s)	1738
BalI	TGGCCA	1 cut(s)	1158
BanI	GGYRCC	4 cut(s)	1498, 1857, 1947, 2087
BanII	GRGCYC	1 cut(s)	1725
Bbv12I	GWGCWC	1 cut(s)	1725
BccI	CCATC	8 cut(s)	188, 523, 1031, 1344, 1652, 1774, 2003, 2015
BceAI	ACGGC	2 cut(s)	222, 1484
BciT130I	CCWGG	4 cut(s)	856, 1160, 1697, 2158
BciVI	GTATCC	2 cut(s)	959, 1994
BcnI	CCSGG	1 cut(s)	1592
BcoDI	GTCTC	3 cut(s)	1163, 1278, 1394
BfaI	CTAG	2 cut(s)	740, 1640
BfmI	CTRYAG	4 cut(s)	870, 1012, 1954, 2171
BfoI	RGCGCY	2 cut(s)	1378, 1951
BfrI	CTTAAG	1 cut(s)	758
BfuI	GTATCC	2 cut(s)	959, 1994
BglII	AGATCT	2 cut(s)	256, 1447
BmcAI	AGTACT	1 cut(s)	672
Bme1390I	CCNGG	5 cut(s)	856, 1160, 1592, 1697, 2158
Bme18I	GGWCC	2 cut(s)	1600, 1741
BmeT110I	CYCGRG	2 cut(s)	522, 1404
BmgT120I	GGNCC	2 cut(s)	1600, 1741
BmiI	GGNNCC	7 cut(s)	1500, 1601, 1602, 1743, 1859, 1949, 2089
BmrFI	CCNGG	5 cut(s)	856, 1160, 1592, 1697, 2158
BmrI	ACTGGG	2 cut(s)	237, 855
BmsI	GCATC	4 cut(s)	1320, 1480, 1525, 2111
BmtI	GCTAGC	1 cut(s)	743
BmuI	ACTGGG	2 cut(s)	237, 855
BplI	GAGNNNNNCTC	2 cut(s)	1707, 1739
BpmI	CTGGAG	2 cut(s)	1208, 1679
Bpu14I	TTCGAA	1 cut(s)	1104
BpuEI	CTTGAG	3 cut(s)	822, 1187, 1310
BpuMI	CCSGG	1 cut(s)	1592
Bsa29I	ATCGAT	1 cut(s)	414
BsaAI	YACGTR	1 cut(s)	1631
BsaHI	GRCGYC	1 cut(s)	1948
BsaI	GGTCTC	1 cut(s)	1163
BsaJI	CCNNGG	3 cut(s)	182, 1159, 2157
BsaWI	WCCGGW	1 cut(s)	1890
Bsc4I	CCNNNNNNNGG	3 cut(s)	1597, 1732, 1751
Bse1I	ACTGG	6 cut(s)	94, 132, 232, 850, 1743, 1845
Bse3DI	GCAATG	2 cut(s)	689, 1913
BseBI	CCWGG	4 cut(s)	856, 1160, 1697, 2158
BseCI	ATCGAT	1 cut(s)	414
BseDI	CCNNGG	3 cut(s)	182, 1159, 2157
BseGI	GGATG	5 cut(s)	1000, 1227, 1335, 1525, 2102
BseLI	CCNNNNNNNGG	3 cut(s)	1597, 1732, 1751
BseMI	GCAATG	2 cut(s)	689, 1913
BseMII	CTCAG	4 cut(s)	765, 1311, 1465, 1788
BseNI	ACTGG	6 cut(s)	94, 132, 232, 850, 1743, 1845
BseRI	GAGGAG	4 cut(s)	1307, 1433, 1841, 2003
BseSI	GKGCMC	1 cut(s)	1738
BseYI	CCCAGC	1 cut(s)	797
BsgI	GTGCAG	2 cut(s)	261, 684
BshFI	GGCC	3 cut(s)	1158, 1224, 1925
BshNI	GGYRCC	4 cut(s)	1498, 1857, 1947, 2087
BshVI	ATCGAT	1 cut(s)	414
BsiHKAI	GWGCWC	1 cut(s)	1725
BsiHKCI	CYCGRG	2 cut(s)	522, 1404
BsiSI	CCGG	2 cut(s)	1591, 1891
BslFI	GGGAC	4 cut(s)	138, 286, 1472, 1613
BslI	CCNNNNNNNGG	3 cut(s)	1597, 1732, 1751
BsmAI	GTCTC	3 cut(s)	1163, 1278, 1394
BsmFI	GGGAC	4 cut(s)	138, 286, 1472, 1613
BsmI	GAATGC	1 cut(s)	407
BsnI	GGCC	3 cut(s)	1158, 1224, 1925
Bso31I	GGTCTC	1 cut(s)	1163
BsoBI	CYCGRG	2 cut(s)	522, 1404
Bsp119I	TTCGAA	1 cut(s)	1104
Bsp1286I	GDGCHC	2 cut(s)	1725, 1738
Bsp1407I	TGTACA	1 cut(s)	3
BspANI	GGCC	3 cut(s)	1158, 1224, 1925
BspCNI	CTCAG	4 cut(s)	764, 1312, 1464, 1789
BspDI	ATCGAT	1 cut(s)	414
BspLI	GGNNCC	7 cut(s)	1500, 1601, 1602, 1743, 1859, 1949, 2089
BspMAI	CTGCAG	2 cut(s)	1016, 2175
BspOI	GCTAGC	1 cut(s)	743
BspPI	GGATC	4 cut(s)	196, 281, 353, 1362
BspQI	GCTCTTC	2 cut(s)	1713, 2130
BspT104I	TTCGAA	1 cut(s)	1104
BspT107I	GGYRCC	4 cut(s)	1498, 1857, 1947, 2087
BspTI	CTTAAG	1 cut(s)	758
BspTNI	GGTCTC	1 cut(s)	1163
BsrBI	CCGCTC	1 cut(s)	1525
BsrDI	GCAATG	2 cut(s)	689, 1913
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	6 cut(s)	94, 132, 232, 850, 1743, 1845
BssECI	CCNNGG	3 cut(s)	182, 1159, 2157
BssNI	GRCGYC	1 cut(s)	1948
Bst2UI	CCWGG	4 cut(s)	856, 1160, 1697, 2158
Bst4CI	ACNGT	7 cut(s)	492, 587, 675, 1096, 1685, 1783, 2006
Bst6I	CTCTTC	5 cut(s)	415, 529, 758, 1713, 2130
BstACI	GRCGYC	1 cut(s)	1948
BstAFI	CTTAAG	1 cut(s)	758
BstAPI	GCANNNNNTGC	3 cut(s)	1330, 2099, 2120
BstAUI	TGTACA	1 cut(s)	3
BstBAI	YACGTR	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	1104
BstC8I	GCNNGC	8 cut(s)	733, 737, 741, 831, 893, 1343, 1753, 1927
BstDEI	CTNAG	5 cut(s)	751, 1320, 1358, 1451, 1797
BstF5I	GGATG	5 cut(s)	1000, 1227, 1335, 1525, 2102
BstH2I	RGCGCY	2 cut(s)	1378, 1951
BstHHI	GCGC	4 cut(s)	480, 1377, 1950, 2083
BstMAI	GTCTC	3 cut(s)	1163, 1278, 1394
BstNI	CCWGG	4 cut(s)	856, 1160, 1697, 2158
BstNSI	RCATGY	2 cut(s)	339, 891
BstSCI	CCNGG	5 cut(s)	854, 1158, 1590, 1695, 2156
BstSFI	CTRYAG	4 cut(s)	870, 1012, 1954, 2171
BstSLI	GKGCMC	1 cut(s)	1738
BstX2I	RGATCY	3 cut(s)	256, 1354, 1447
BstYI	RGATCY	3 cut(s)	256, 1354, 1447
Bsu15I	ATCGAT	1 cut(s)	414
BsuI	GTATCC	2 cut(s)	959, 1994
BsuRI	GGCC	3 cut(s)	1158, 1224, 1925
BsuTUI	ATCGAT	1 cut(s)	414
BtgZI	GCGATG	1 cut(s)	1322
BtsCI	GGATG	5 cut(s)	1000, 1227, 1335, 1525, 2102
BtsI	GCAGTG	4 cut(s)	249, 955, 1331, 2152
BtsIMutI	CAGTG	9 cut(s)	249, 843, 955, 1331, 1690, 1736, 1788, 2011, 2152
Cac8I	GCNNGC	8 cut(s)	733, 737, 741, 831, 893, 1343, 1753, 1927
CaiI	CAGNNNCTG	2 cut(s)	89, 718
CfoI	GCGC	4 cut(s)	480, 1377, 1950, 2083
Cfr13I	GGNCC	2 cut(s)	1600, 1741
ClaI	ATCGAT	1 cut(s)	414
Csp6I	GTAC	8 cut(s)	4, 498, 623, 671, 859, 1149, 1578, 1882
CviAII	CATG	4 cut(s)	336, 481, 888, 1731
CviQI	GTAC	8 cut(s)	4, 498, 623, 671, 859, 1149, 1578, 1882
DdeI	CTNAG	5 cut(s)	751, 1320, 1358, 1451, 1797
DinI	GGCGCC	1 cut(s)	1949
DraI	TTTAAA	2 cut(s)	747, 2059
EaeI	YGGCCR	1 cut(s)	1156
Eam1104I	CTCTTC	5 cut(s)	415, 529, 758, 1713, 2130
EarI	CTCTTC	5 cut(s)	415, 529, 758, 1713, 2130
Ecl136II	GAGCTC	1 cut(s)	1723
Eco24I	GRGCYC	1 cut(s)	1725
Eco31I	GGTCTC	1 cut(s)	1163
Eco32I	GATATC	1 cut(s)	578
Eco47I	GGWCC	2 cut(s)	1600, 1741
Eco53kI	GAGCTC	1 cut(s)	1723
Eco57I	CTGAAG	2 cut(s)	1059, 1253
Eco88I	CYCGRG	2 cut(s)	522, 1404
EcoICRI	GAGCTC	1 cut(s)	1723
EcoO109I	RGGNCCY	1 cut(s)	1600
EcoRII	CCWGG	4 cut(s)	854, 1158, 1695, 2156
EcoRV	GATATC	1 cut(s)	578
EcoT38I	GRGCYC	1 cut(s)	1725
EgeI	GGCGCC	1 cut(s)	1949
EheI	GGCGCC	1 cut(s)	1949
FaeI	CATG	4 cut(s)	339, 484, 891, 1734
FaqI	GGGAC	4 cut(s)	138, 286, 1472, 1613
FatI	CATG	4 cut(s)	335, 480, 887, 1730
FauI	CCCGC	4 cut(s)	740, 763, 888, 2114
FauNDI	CATATG	1 cut(s)	1205
FblI	GTMKAC	1 cut(s)	677
FokI	GGATG	5 cut(s)	1007, 1214, 1342, 1532, 2089
FriOI	GRGCYC	1 cut(s)	1725
FspBI	CTAG	2 cut(s)	740, 1640
FspI	TGCGCA	1 cut(s)	479
GlaI	GCGC	4 cut(s)	479, 1376, 1949, 2082
GsaI	CCCAGC	1 cut(s)	801
GsuI	CTGGAG	2 cut(s)	1208, 1679
HaeII	RGCGCY	2 cut(s)	1378, 1951
HaeIII	GGCC	3 cut(s)	1158, 1224, 1925
HapII	CCGG	2 cut(s)	1591, 1891
HhaI	GCGC	4 cut(s)	480, 1377, 1950, 2083
Hin1I	GRCGYC	1 cut(s)	1948
Hin1II	CATG	4 cut(s)	339, 484, 891, 1734
Hin6I	GCGC	4 cut(s)	478, 1375, 1948, 2081
HinP1I	GCGC	4 cut(s)	478, 1375, 1948, 2081
HindIII	AAGCTT	1 cut(s)	900
HinfI	GANTC	5 cut(s)	62, 1053, 1316, 1402, 1435
HpaII	CCGG	2 cut(s)	1591, 1891
HphI	GGTGA	3 cut(s)	551, 1715, 2063
Hpy166II	GTNNAC	4 cut(s)	542, 678, 1547, 1884
Hpy188III	TCNNGA	8 cut(s)	251, 379, 392, 1077, 1187, 1289, 1432, 1453
Hpy8I	GTNNAC	4 cut(s)	542, 678, 1547, 1884
HpyAV	CCTTC	8 cut(s)	955, 1250, 1488, 1589, 1694, 1780, 1871, 1897
HpyCH4III	ACNGT	7 cut(s)	492, 587, 675, 1096, 1685, 1783, 2006
HpyCH4IV	ACGT	3 cut(s)	71, 1549, 1630
HpyF3I	CTNAG	5 cut(s)	751, 1320, 1358, 1451, 1797
HpySE526I	ACGT	3 cut(s)	71, 1549, 1630
Hsp92I	GRCGYC	1 cut(s)	1948
Hsp92II	CATG	4 cut(s)	339, 484, 891, 1734
HspAI	GCGC	4 cut(s)	478, 1375, 1948, 2081
KasI	GGCGCC	1 cut(s)	1947
KflI	GGGWCCC	1 cut(s)	1600
LguI	GCTCTTC	2 cut(s)	1713, 2130
LmnI	GCTCC	2 cut(s)	1698, 1728
LweI	GCATC	4 cut(s)	1320, 1480, 1525, 2111
MaeI	CTAG	2 cut(s)	740, 1640
MaeII	ACGT	3 cut(s)	71, 1549, 1630
MaeIII	GTNAC	7 cut(s)	587, 714, 841, 905, 1313, 1648, 1703
MbiI	CCGCTC	1 cut(s)	1525
MflI	RGATCY	3 cut(s)	256, 1354, 1447
MhlI	GDGCHC	2 cut(s)	1725, 1738
MlsI	TGGCCA	1 cut(s)	1158
MluCI	AATT	8 cut(s)	38, 169, 219, 932, 1281, 1483, 1835, 1994
MluNI	TGGCCA	1 cut(s)	1158
Mly113I	GGCGCC	1 cut(s)	1948
MlyI	GAGTC	3 cut(s)	1310, 1396, 1429
MmeI	TCCRAC	1 cut(s)	1377
Mox20I	TGGCCA	1 cut(s)	1158
MroXI	GAANNNNTTC	1 cut(s)	1368
MscI	TGGCCA	1 cut(s)	1158
MslI	CAYNNNNRTG	3 cut(s)	657, 912, 1906
Msp20I	TGGCCA	1 cut(s)	1158
MspA1I	CMGCKG	1 cut(s)	1017
MspCI	CTTAAG	1 cut(s)	758
MspI	CCGG	2 cut(s)	1591, 1891
MspR9I	CCNGG	5 cut(s)	856, 1160, 1592, 1697, 2158
Mva1269I	GAATGC	1 cut(s)	407
MvaI	CCWGG	4 cut(s)	856, 1160, 1697, 2158
NarI	GGCGCC	1 cut(s)	1948
NciI	CCSGG	1 cut(s)	1592
NdeI	CATATG	1 cut(s)	1205
NheI	GCTAGC	1 cut(s)	739
NlaIII	CATG	4 cut(s)	339, 484, 891, 1734
NlaIV	GGNNCC	7 cut(s)	1500, 1601, 1602, 1743, 1859, 1949, 2089
NmeAIII	GCCGAG	1 cut(s)	2177
NmuCI	GTSAC	4 cut(s)	841, 905, 1313, 1703
NsbI	TGCGCA	1 cut(s)	479
NspI	RCATGY	2 cut(s)	339, 891
NspV	TTCGAA	1 cut(s)	1104
OliI	CACNNNNGTG	1 cut(s)	912
PaeR7I	CTCGAG	1 cut(s)	1404
PciSI	GCTCTTC	2 cut(s)	1713, 2130
PctI	GAATGC	1 cut(s)	407
PdmI	GAANNNNTTC	1 cut(s)	1368
PfeI	GAWTC	2 cut(s)	62, 1053
PfoI	TCCNGGA	2 cut(s)	1590, 1695
PleI	GAGTC	3 cut(s)	1310, 1396, 1429
PluTI	GGCGCC	1 cut(s)	1951
PpsI	GAGTC	3 cut(s)	1310, 1396, 1429
Ppu21I	YACGTR	1 cut(s)	1631
PpuMI	RGGWCCY	1 cut(s)	1600
Psp124BI	GAGCTC	1 cut(s)	1725
Psp5II	RGGWCCY	1 cut(s)	1600
Psp6I	CCWGG	4 cut(s)	854, 1158, 1695, 2156
PspFI	CCCAGC	1 cut(s)	797
PspGI	CCWGG	4 cut(s)	854, 1158, 1695, 2156
PspN4I	GGNNCC	7 cut(s)	1500, 1601, 1602, 1743, 1859, 1949, 2089
PspPI	GGNCC	2 cut(s)	1600, 1741
PspPPI	RGGWCCY	1 cut(s)	1600
PspXI	VCTCGAGB	1 cut(s)	1404
PstI	CTGCAG	2 cut(s)	1016, 2175
PstNI	CAGNNNCTG	2 cut(s)	89, 718
PsuI	RGATCY	3 cut(s)	256, 1354, 1447
RsaI	GTAC	8 cut(s)	5, 499, 624, 672, 860, 1150, 1579, 1883
RsaNI	GTAC	8 cut(s)	4, 498, 623, 671, 859, 1149, 1578, 1882
RseI	CAYNNNNRTG	3 cut(s)	657, 912, 1906
SacI	GAGCTC	1 cut(s)	1725
SapI	GCTCTTC	2 cut(s)	1713, 2130
Sau96I	GGNCC	2 cut(s)	1600, 1741
ScaI	AGTACT	1 cut(s)	672
SchI	GAGTC	3 cut(s)	1310, 1396, 1429
ScrFI	CCNGG	5 cut(s)	856, 1160, 1592, 1697, 2158
SduI	GDGCHC	2 cut(s)	1725, 1738
SfaNI	GCATC	4 cut(s)	1320, 1480, 1525, 2111
SfcI	CTRYAG	4 cut(s)	870, 1012, 1954, 2171
SfoI	GGCGCC	1 cut(s)	1949
Sfr274I	CTCGAG	1 cut(s)	1404
SfuI	TTCGAA	1 cut(s)	1104
SinI	GGWCC	2 cut(s)	1600, 1741
SlaI	CTCGAG	1 cut(s)	1404
SmiMI	CAYNNNNRTG	3 cut(s)	657, 912, 1906
SmlI	CTYRAG	5 cut(s)	758, 837, 1166, 1289, 1404
SmoI	CTYRAG	5 cut(s)	758, 837, 1166, 1289, 1404
Sse9I	AATT	8 cut(s)	38, 169, 219, 932, 1281, 1483, 1835, 1994
SspDI	GGCGCC	1 cut(s)	1947
SspMI	CTAG	2 cut(s)	740, 1640
SstI	GAGCTC	1 cut(s)	1725
StyD4I	CCNGG	5 cut(s)	854, 1158, 1590, 1695, 2156
TaaI	ACNGT	7 cut(s)	492, 587, 675, 1096, 1685, 1783, 2006
TaiI	ACGT	3 cut(s)	74, 1552, 1633
TaqI	TCGA	7 cut(s)	387, 414, 925, 1091, 1104, 1405, 1777
TasI	AATT	8 cut(s)	38, 169, 219, 932, 1281, 1483, 1835, 1994
TatI	WGTACW	4 cut(s)	3, 670, 1577, 1881
TauI	GCSGC	4 cut(s)	1925, 1973, 2049, 2093
TfiI	GAWTC	2 cut(s)	62, 1053
TscAI	CASTG	9 cut(s)	249, 850, 955, 1331, 1690, 1743, 1788, 2011, 2152
TseFI	GTSAC	4 cut(s)	841, 905, 1313, 1703
Tsp45I	GTSAC	4 cut(s)	841, 905, 1313, 1703
TspDTI	ATGAA	4 cut(s)	974, 1077, 1612, 1853
TspGWI	ACGGA	2 cut(s)	154, 669
TspRI	CASTG	9 cut(s)	249, 850, 955, 1331, 1690, 1743, 1788, 2011, 2152
Vha464I	CTTAAG	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	1600, 1741
XapI	RAATTY	5 cut(s)	38, 932, 1483, 1835, 1994
XceI	RCATGY	2 cut(s)	339, 891
XhoI	CTCGAG	1 cut(s)	1404
XmiI	GTMKAC	1 cut(s)	677
XmnI	GAANNNNTTC	1 cut(s)	1368
XspI	CTAG	2 cut(s)	740, 1640
ZrmI	AGTACT	1 cut(s)	672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.