No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD02G1227000.v1.1 MD07G1086500.v1.1 MD13G1075300.v1.1 |
| prunus_persica | Prupe.2G112900_v2.0.a1 Prupe.2G112900_v2.0.a1 Prupe.3G128800_v2.0.a1 |
| rosa_multiflora | Rmu_sc0000335.1_g000025 Rmu_sc0006326.1_g000029 |
| rosa_rugosa | Rorug01G0166900 |
| rosa_samantha | Rh1AG182600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 372 |
| AfaI | GTAC | 1 cut(s) | 237 |
| AgsI | TTSAA | 5 cut(s) | 130, 189, 231, 271, 370 |
| AleI | CACNNNNGTG | 1 cut(s) | 58 |
| AluBI | AGCT | 2 cut(s) | 140, 324 |
| AluI | AGCT | 2 cut(s) | 140, 324 |
| ApoI | RAATTY | 1 cut(s) | 372 |
| BccI | CCATC | 1 cut(s) | 284 |
| BciVI | GTATCC | 1 cut(s) | 74 |
| BfuI | GTATCC | 1 cut(s) | 74 |
| BmsI | GCATC | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| BsaJI | CCNNGG | 1 cut(s) | 280 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 308, 338 |
| Bse1I | ACTGG | 1 cut(s) | 67 |
| BseDI | CCNNGG | 1 cut(s) | 280 |
| BseGI | GGATG | 2 cut(s) | 276, 306 |
| BseMII | CTCAG | 1 cut(s) | 302 |
| BseNI | ACTGG | 1 cut(s) | 67 |
| Bsh1285I | CGRYCG | 1 cut(s) | 94 |
| BsiEI | CGRYCG | 1 cut(s) | 94 |
| Bsp19I | CCATGG | 1 cut(s) | 280 |
| BspCNI | CTCAG | 1 cut(s) | 303 |
| BsrI | ACTGG | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 280 |
| BssT1I | CCWWGG | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 4 cut(s) | 47, 57, 80, 235 |
| BstDEI | CTNAG | 1 cut(s) | 311 |
| BstDSI | CCRYGG | 1 cut(s) | 280 |
| BstF5I | GGATG | 2 cut(s) | 276, 306 |
| BstMCI | CGRYCG | 1 cut(s) | 94 |
| BsuI | GTATCC | 1 cut(s) | 74 |
| BtgI | CCRYGG | 1 cut(s) | 280 |
| BtsCI | GGATG | 2 cut(s) | 276, 306 |
| Csp6I | GTAC | 1 cut(s) | 236 |
| CviAII | CATG | 4 cut(s) | 8, 239, 281, 347 |
| CviJI | RGCY | 2 cut(s) | 140, 324 |
| CviKI_1 | RGCY | 2 cut(s) | 140, 324 |
| CviQI | GTAC | 1 cut(s) | 236 |
| DdeI | CTNAG | 1 cut(s) | 311 |
| Eco130I | CCWWGG | 1 cut(s) | 280 |
| EcoT14I | CCWWGG | 1 cut(s) | 280 |
| EcoT22I | ATGCAT | 1 cut(s) | 111 |
| ErhI | CCWWGG | 1 cut(s) | 280 |
| FaeI | CATG | 4 cut(s) | 11, 242, 284, 350 |
| FaiI | YATR | 7 cut(s) | 9, 111, 240, 282, 297, 299, 348 |
| FatI | CATG | 4 cut(s) | 7, 238, 280, 346 |
| FokI | GGATG | 2 cut(s) | 263, 293 |
| Hin1II | CATG | 4 cut(s) | 11, 242, 284, 350 |
| HinfI | GANTC | 3 cut(s) | 4, 195, 313 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 310 |
| Hpy99I | CGWCG | 2 cut(s) | 61, 84 |
| HpyAV | CCTTC | 2 cut(s) | 143, 337 |
| HpyCH4III | ACNGT | 4 cut(s) | 47, 57, 80, 235 |
| HpyCH4V | TGCA | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 1 cut(s) | 311 |
| Hsp92II | CATG | 4 cut(s) | 11, 242, 284, 350 |
| LmnI | GCTCC | 1 cut(s) | 329 |
| LpnPI | CCDG | 4 cut(s) | 80, 150, 171, 323 |
| LweI | GCATC | 1 cut(s) | 96 |
| MaeIII | GTNAC | 3 cut(s) | 16, 262, 314 |
| MluCI | AATT | 2 cut(s) | 300, 372 |
| MlyI | GAGTC | 1 cut(s) | 322 |
| MmeI | TCCRAC | 1 cut(s) | 223 |
| MnlI | CCTC | 2 cut(s) | 235, 344 |
| Mph1103I | ATGCAT | 1 cut(s) | 111 |
| MseI | TTAA | 2 cut(s) | 75, 376 |
| MslI | CAYNNNNRTG | 2 cut(s) | 58, 219 |
| NcoI | CCATGG | 1 cut(s) | 280 |
| NlaIII | CATG | 4 cut(s) | 11, 242, 284, 350 |
| NmuCI | GTSAC | 3 cut(s) | 16, 262, 314 |
| NsiI | ATGCAT | 1 cut(s) | 111 |
| OliI | CACNNNNGTG | 1 cut(s) | 58 |
| PfeI | GAWTC | 2 cut(s) | 4, 195 |
| PleI | GAGTC | 1 cut(s) | 321 |
| PpsI | GAGTC | 1 cut(s) | 321 |
| RsaI | GTAC | 1 cut(s) | 237 |
| RsaNI | GTAC | 1 cut(s) | 236 |
| RseI | CAYNNNNRTG | 2 cut(s) | 58, 219 |
| SaqAI | TTAA | 2 cut(s) | 75, 376 |
| SchI | GAGTC | 1 cut(s) | 322 |
| SetI | ASST | 3 cut(s) | 135, 142, 326 |
| SfaNI | GCATC | 1 cut(s) | 96 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 58, 219 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 2 cut(s) | 300, 372 |
| SspI | AATATT | 1 cut(s) | 248 |
| StyI | CCWWGG | 1 cut(s) | 280 |
| TaaI | ACNGT | 4 cut(s) | 47, 57, 80, 235 |
| TaqI | TCGA | 1 cut(s) | 90 |
| TaqII | GACCGA | 1 cut(s) | 108 |
| TasI | AATT | 2 cut(s) | 300, 372 |
| TatI | WGTACW | 1 cut(s) | 235 |
| TfiI | GAWTC | 2 cut(s) | 4, 195 |
| Tru1I | TTAA | 2 cut(s) | 75, 376 |
| Tru9I | TTAA | 2 cut(s) | 75, 376 |
| TseFI | GTSAC | 3 cut(s) | 16, 262, 314 |
| Tsp45I | GTSAC | 3 cut(s) | 16, 262, 314 |
| TspDTI | ATGAA | 3 cut(s) | 17, 237, 363 |
| XapI | RAATTY | 1 cut(s) | 372 |
| Zsp2I | ATGCAT | 1 cut(s) | 111 |