Prupe.3G202400_v2.0.a1

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0012328
Physical Location & Seq
Forward (+)
21039013 .. 21043472
4460 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G202400.1

Sequence Viewer

Length: 2058 bp
ATGGAAGCTGCAAGCCCATTAAAAGGTAGTTCTGTTTCGTCAAGTCCTTTCTCTTCACCAAACGTTGGAGCCTTGCTCAAGATTAAGATTTTGTCATGGACCCAAGAGACCGGTTTGCCTGTTTCCGTTAGCGTTCGAGTTCTTGGGAAGATCTTCAACCTCCACAAGTTTCCACTATTTTCAAAGAGTGGGTATTTCAAGAAAAGATTGAATGAATCAACTGAGCTTGAGCTCCCACCAGACTTCCCTGGAGGGCCAGAGACATTTGAGATGATTGCGTTGTTCATCTATGGCTCCTCCACATTGATTGATCCATTCAATGTTGTAGCCCTGAGATGTGCAGCAGAGTTTCTTGAGATGACAGAAGATTACTGCTCTGGCAACCTCTGTGAGCGCTTTGATCTCTACTTAAACCAAGTGGTCATGCAGAGTTGGGATGACACTCTAATAGTACTCCAAAAGTGCCAAACTTTGCTTCCATGGTCTGAAGATTTGCTCATCGTCAGCCGCTGCATCGAGTGCCTTGCCTTCATGGCTTGCATGGAGATCCTTGATCCAGAGAGAAGACGTGACACCCCGGTGCTCACATTGGAGGCATTGAGCACCCGAAATTGGAGCTGTGAGATAGGGAGGGAGATTATGAGTCAGGACCTTTGGATCAAGGATCTGATTGCTCTACCATTTGGATTCTTTAAAAGGATTATAGGGTCCTTAAGAAGACAGGGTATGAAAGAAAAATATTTAAGCCCCATCATTGTTTTCTATGCTAACAAATGGGTGCTTTCAAAGAAGACCCTCCAATTTTGGGAGAACTCTGGTCAGAAAACTGGGGATGATCACAAAGTTTCAGTCATCCTACAAGGTGTTCTTGATTTGCTGCCCATGGGGGAGAAGGCTAGTCGATCAATTCCAGTCGGGTTTTACTTTGCAATCCTTTCTAGATCCCTTGAAGTAGGTTTGAGAATCGATAGCAGGGCAAAGTTGCAAGAGAAGATTGTATCTCTGTTGCACTTTGCCCAACTAGAAGACTTTCTCTTTCCAAAAAGTGGAACTGAGTCAATTTCTTCTAGCATGGAGCTGTCTACAATGGAGAGCATAATTTCAACATATGTGTCATCTAACATGGAGGCAGACCATAGTCTTTCAGCAGGCCATTCAATTATTGTTGCAGAATTGTGGGATGCATATCTTTCCTACATAGCTCCTGATCCAAATATGGAGCCTAAAAGATTCATGGAACTCATCGAAAGAGTGCCGATATCCTACAGACAAAGTCATGATAAACTCTACAGAGCAATGAACACCTTCCTACAGGCAAACCCAAATATATCCCAAGAAGAGAAGTGGGCAGTCTGCAAATACCTCAATTGCCAGAAACTATCACAAGAGGCATGCATTGAGGCTGTTCAAAATGAATTGATGCCGCTACGTTTAATAGTGCAGGCACTTTTTGTCCAGCAAATCAGCACTCACCAAGCTTTCAAAGAATGCTCAGATTCATTCAGATATGTACACTGTGGAGAGTTTTCCGGGAGCCTCTCAAGCTCCAGATGCCCAAACTCCAAAAGCCAGAATCTAGGAGATAGTCCATATGTAGATGGAGCAGAGCAAGGCAGCAGACCCTTGAGCTTCTTGCTACAAAAGGACAATGTAAATCAGAGACCTGAGTTATCAAGGAAGGAATATGAGTCAACAAGCTTCAGAATTCAGAACCTTGAACAAGAGCTCATGTCCTTGAAGCGAAGCCTTCAATGGCAGAGCATTTCAAAGAAAAAAGAGGCAATTTCAACCACAGCACATAGCATGAAATCGTATGGTAAGGAAAGTAGATCAATGAGCAAAAAGAGTAACCCTCTTGGACAAGTGACAAGTTGCATTGGTTCTGTGAATTTCACCTCGCAAAGAAAATATGCCAGTCGATTATTGAAGGTCTTCCGCCGGATTTCCTTGTTTGGAAGTAGAAAACCAAAGAGAAAGCCATGTGCCCCCAGCCCATGGCCCAAGCCAATGCAGCAGAACACTCATCAGCAAAAGATGTATGAAAATCAGAACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

686

Amino Acids

77.87

Weight (kDa)

8.74

Isoelectric Point (pI)

56.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012328)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48130
fragaria_vesca FvH4_6g41250 FvH4_6g41250 FvH4_6g41250
malus_domestica MD09G1121300.v1.1 MD17G1112300.v1.1
prunus_persica Prupe.3G202400_v2.0.a1
pyrus_communis pycom09g04570 pycom17g10400
rosa_chinensis RchiOBHm_Chr2g0156801
rosa_laevigata RLG00000020943
rosa_multiflora Rmu_co8389443.1_g000001
rosa_roxburghii Rroxscaffold_2G00092710
rosa_rugosa Rorug02G0456300
rosa_samantha Rh2AG521900 Rh2BG535300 Rh2CG506800 Rh2DG544300
rosa_wichuraiana Rw2G043090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 65, 1046, 1995
AccI GTMKAC 1 cut(s) 1082
AciI CCGC 3 cut(s) 508, 1424, 1936
AclI AACGTT 1 cut(s) 63
AclWI GGATC 7 cut(s) 305, 541, 548, 665, 672, 936, 1202
AcsI RAATTY 2 cut(s) 1704, 1888
AcuI CTGAAG 2 cut(s) 507, 1684
AfaI GTAC 2 cut(s) 453, 1512
AfeI AGCGCT 1 cut(s) 395
AfiI CCNNNNNNNGG 6 cut(s) 23, 65, 612, 805, 1046, 1995
AflII CTTAAG 1 cut(s) 712
AgeI ACCGGT 1 cut(s) 110
AjiI CACGTC 1 cut(s) 569
AjnI CCWGG 1 cut(s) 247
AjuI GAANNNNNNNTTGG 2 cut(s) 459, 491
AleI CACNNNNGTG 1 cut(s) 578
Alw21I GWGCWC 4 cut(s) 234, 585, 605, 1728
Alw26I GTCTC 3 cut(s) 101, 254, 1654
AlwI GGATC 7 cut(s) 305, 541, 548, 665, 672, 936, 1202
AlwNI CAGNNNCTG 1 cut(s) 510
Aor51HI AGCGCT 1 cut(s) 395
AoxI GGCC 3 cut(s) 254, 1150, 1997
ApeKI GCWGC 6 cut(s) 8, 341, 510, 877, 1614, 2011
ApoI RAATTY 2 cut(s) 1704, 1888
ArsI GACNNNNNNTTYG 2 cut(s) 834, 866
AsiGI ACCGGT 1 cut(s) 110
Asp700I GAANNNNTTC 4 cut(s) 152, 1029, 1304, 1931
AspLEI GCGC 1 cut(s) 396
AspS9I GGNCC 5 cut(s) 99, 254, 649, 708, 1998
AsuC2I CCSGG 2 cut(s) 578, 1531
AsuHPI GGTGA 3 cut(s) 48, 1463, 1885
AvaII GGWCC 3 cut(s) 99, 649, 708
BaeGI GKGCMC 1 cut(s) 1987
BanII GRGCYC 2 cut(s) 234, 1728
BbsI GAAGAC 5 cut(s) 571, 724, 797, 1032, 1924
Bbv12I GWGCWC 4 cut(s) 234, 585, 605, 1728
BbvI GCAGC 5 cut(s) 353, 497, 864, 1626, 2023
BccI CCATC 2 cut(s) 758, 1592
BcgI CGANNNNNNTGC 2 cut(s) 506, 540
BciT130I CCWGG 1 cut(s) 249
BclI TGATCA 1 cut(s) 835
BcnI CCSGG 2 cut(s) 578, 1531
BcoDI GTCTC 3 cut(s) 101, 254, 1654
BfaI CTAG 5 cut(s) 897, 939, 1022, 1068, 1577
BfmI CTRYAG 3 cut(s) 1264, 1288, 1310
BfoI RGCGCY 1 cut(s) 397
BfrI CTTAAG 1 cut(s) 712
BglI GCCNNNNNGGC 1 cut(s) 533
BglII AGATCT 1 cut(s) 150
BisI GCNGC 8 cut(s) 9, 342, 508, 511, 878, 1424, 1615, 2012
BlsI GCNGC 8 cut(s) 10, 343, 509, 512, 879, 1425, 1616, 2013
BmcAI AGTACT 1 cut(s) 453
Bme1390I CCNGG 3 cut(s) 249, 578, 1531
Bme18I GGWCC 3 cut(s) 99, 649, 708
BmgBI CACGTC 1 cut(s) 569
BmgT120I GGNCC 5 cut(s) 99, 254, 649, 708, 1998
BmiI GGNNCC 6 cut(s) 70, 101, 295, 709, 1221, 1535
BmrFI CCNGG 3 cut(s) 249, 578, 1531
BmrI ACTGGG 1 cut(s) 837
BmsI GCATC 4 cut(s) 522, 1171, 1410, 1541
BmuI ACTGGG 1 cut(s) 837
BoxI GACNNNNGTC 1 cut(s) 1137
BpiI GAAGAC 5 cut(s) 571, 724, 797, 1032, 1924
BplI GAGNNNNNCTC 4 cut(s) 60, 92, 1837, 1869
BpmI CTGGAG 2 cut(s) 270, 1531
BpuEI CTTGAG 5 cut(s) 62, 248, 374, 1525, 1645
BpuMI CCSGG 2 cut(s) 578, 1531
Bsa29I ATCGAT 1 cut(s) 966
BsaBI GATNNNNATC 1 cut(s) 1185
BsaI GGTCTC 2 cut(s) 101, 1654
BsaJI CCNNGG 5 cut(s) 247, 479, 576, 882, 1994
BsaWI WCCGGW 1 cut(s) 110
Bsc4I CCNNNNNNNGG 6 cut(s) 23, 65, 612, 805, 1046, 1995
Bse118I RCCGGY 1 cut(s) 110
Bse1I ACTGG 4 cut(s) 832, 911, 1914, 2053
Bse3DI GCAATG 1 cut(s) 1302
Bse8I GATNNNNATC 1 cut(s) 1185
BseBI CCWGG 1 cut(s) 249
BseCI ATCGAT 1 cut(s) 966
BseDI CCNNGG 5 cut(s) 247, 479, 576, 882, 1994
BseGI GGATG 4 cut(s) 442, 838, 852, 1186
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 6 cut(s) 23, 65, 612, 805, 1046, 1995
BseMI GCAATG 1 cut(s) 1302
BseMII CTCAG 5 cut(s) 213, 323, 1044, 1506, 1656
BseNI ACTGG 4 cut(s) 832, 911, 1914, 2053
BseRI GAGGAG 1 cut(s) 286
BseSI GKGCMC 1 cut(s) 1987
BseXI GCAGC 5 cut(s) 353, 497, 864, 1626, 2023
BseYI CCCAGC 1 cut(s) 1988
BsgI GTGCAG 2 cut(s) 360, 1460
BshFI GGCC 3 cut(s) 256, 1152, 1999
BshTI ACCGGT 1 cut(s) 110
BshVI ATCGAT 1 cut(s) 966
BsiHKAI GWGCWC 4 cut(s) 234, 585, 605, 1728
BsiSI CCGG 4 cut(s) 111, 578, 1530, 1939
BslI CCNNNNNNNGG 6 cut(s) 23, 65, 612, 805, 1046, 1995
BsmAI GTCTC 3 cut(s) 101, 254, 1654
BsmI GAATGC 1 cut(s) 1493
BsnI GGCC 3 cut(s) 256, 1152, 1999
Bso31I GGTCTC 2 cut(s) 101, 1654
Bsp1286I GDGCHC 5 cut(s) 234, 585, 605, 1728, 1987
Bsp1407I TGTACA 1 cut(s) 1510
Bsp19I CCATGG 3 cut(s) 479, 882, 1994
BspACI CCGC 3 cut(s) 508, 1424, 1936
BspANI GGCC 3 cut(s) 256, 1152, 1999
BspCNI CTCAG 5 cut(s) 214, 324, 1045, 1505, 1657
BspDI ATCGAT 1 cut(s) 966
BspHI TCATGA 1 cut(s) 1276
BspLI GGNNCC 6 cut(s) 70, 101, 295, 709, 1221, 1535
BspPI GGATC 7 cut(s) 305, 541, 548, 665, 672, 936, 1202
BspTI CTTAAG 1 cut(s) 712
BspTNI GGTCTC 2 cut(s) 101, 1654
BsrDI GCAATG 1 cut(s) 1302
BsrFI RCCGGY 1 cut(s) 110
BsrGI TGTACA 1 cut(s) 1510
BsrI ACTGG 4 cut(s) 832, 911, 1914, 2053
BssAI RCCGGY 1 cut(s) 110
BssECI CCNNGG 5 cut(s) 247, 479, 576, 882, 1994
BssT1I CCWWGG 3 cut(s) 479, 882, 1994
Bst2UI CCWGG 1 cut(s) 249
Bst4CI ACNGT 1 cut(s) 1517
Bst6I CTCTTC 2 cut(s) 58, 1332
BstAFI CTTAAG 1 cut(s) 712
BstAPI GCANNNNNTGC 1 cut(s) 519
BstAUI TGTACA 1 cut(s) 1510
BstC8I GCNNGC 5 cut(s) 13, 538, 1150, 1393, 1443
BstDEI CTNAG 5 cut(s) 222, 332, 1053, 1492, 1665
BstDSI CCRYGG 3 cut(s) 479, 882, 1994
BstF5I GGATG 4 cut(s) 442, 838, 852, 1186
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 1 cut(s) 396
BstMAI GTCTC 3 cut(s) 101, 254, 1654
BstMWI GCNNNNNNNGC 5 cut(s) 519, 533, 1542, 1551, 2011
BstNI CCWGG 1 cut(s) 249
BstNSI RCATGY 1 cut(s) 1395
BstPAI GACNNNNGTC 1 cut(s) 1137
BstSCI CCNGG 3 cut(s) 247, 576, 1529
BstSFI CTRYAG 3 cut(s) 1264, 1288, 1310
BstSLI GKGCMC 1 cut(s) 1987
BstV1I GCAGC 5 cut(s) 353, 497, 864, 1626, 2023
BstV2I GAAGAC 5 cut(s) 571, 724, 797, 1032, 1924
BstX2I RGATCY 4 cut(s) 150, 546, 664, 941
BstYI RGATCY 4 cut(s) 150, 546, 664, 941
Bsu15I ATCGAT 1 cut(s) 966
BsuRI GGCC 3 cut(s) 256, 1152, 1999
BsuTUI ATCGAT 1 cut(s) 966
BtgI CCRYGG 3 cut(s) 479, 882, 1994
BtrI CACGTC 1 cut(s) 569
BtsCI GGATG 4 cut(s) 442, 838, 852, 1186
BtsIMutI CAGTG 1 cut(s) 1513
Cac8I GCNNGC 5 cut(s) 13, 538, 1150, 1393, 1443
CaiI CAGNNNCTG 1 cut(s) 510
CciI TCATGA 1 cut(s) 1276
CfoI GCGC 1 cut(s) 396
Cfr10I RCCGGY 1 cut(s) 110
Cfr13I GGNCC 5 cut(s) 99, 254, 649, 708, 1998
ClaI ATCGAT 1 cut(s) 966
Csp6I GTAC 2 cut(s) 452, 1511
CspAI ACCGGT 1 cut(s) 110
CspCI CAANNNNNGTGG 2 cut(s) 289, 324
CviQI GTAC 2 cut(s) 452, 1511
DdeI CTNAG 5 cut(s) 222, 332, 1053, 1492, 1665
DraI TTTAAA 1 cut(s) 694
Eam1104I CTCTTC 2 cut(s) 58, 1332
EarI CTCTTC 2 cut(s) 58, 1332
EciI GGCGGA 1 cut(s) 1925
Ecl136II GAGCTC 2 cut(s) 232, 1726
Eco130I CCWWGG 3 cut(s) 479, 882, 1994
Eco24I GRGCYC 2 cut(s) 234, 1728
Eco31I GGTCTC 2 cut(s) 101, 1654
Eco32I GATATC 1 cut(s) 1260
Eco47I GGWCC 3 cut(s) 99, 649, 708
Eco47III AGCGCT 1 cut(s) 395
Eco53kI GAGCTC 2 cut(s) 232, 1726
Eco57I CTGAAG 2 cut(s) 507, 1684
EcoICRI GAGCTC 2 cut(s) 232, 1726
EcoO109I RGGNCCY 2 cut(s) 649, 708
EcoRI GAATTC 1 cut(s) 1704
EcoRII CCWGG 1 cut(s) 247
EcoRV GATATC 1 cut(s) 1260
EcoT14I CCWWGG 3 cut(s) 479, 882, 1994
EcoT22I ATGCAT 2 cut(s) 1186, 1397
EcoT38I GRGCYC 2 cut(s) 234, 1728
ErhI CCWWGG 3 cut(s) 479, 882, 1994
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FauNDI CATATG 2 cut(s) 1108, 1591
FbaI TGATCA 1 cut(s) 835
FblI GTMKAC 1 cut(s) 1082
Fnu4HI GCNGC 8 cut(s) 9, 342, 508, 511, 878, 1424, 1615, 2012
FokI GGATG 4 cut(s) 449, 839, 845, 1193
FriOI GRGCYC 2 cut(s) 234, 1728
Fsp4HI GCNGC 8 cut(s) 9, 342, 508, 511, 878, 1424, 1615, 2012
FspBI CTAG 5 cut(s) 897, 939, 1022, 1068, 1577
GlaI GCGC 1 cut(s) 395
GluI GCNGC 8 cut(s) 9, 342, 508, 511, 878, 1424, 1615, 2012
GsaI CCCAGC 1 cut(s) 1992
GsuI CTGGAG 2 cut(s) 270, 1531
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 3 cut(s) 256, 1152, 1999
HapII CCGG 4 cut(s) 111, 578, 1530, 1939
HhaI GCGC 1 cut(s) 396
Hin6I GCGC 1 cut(s) 394
HinP1I GCGC 1 cut(s) 394
HincII GTYRAC 1 cut(s) 1692
HindII GTYRAC 1 cut(s) 1692
HindIII AAGCTT 2 cut(s) 1476, 1696
HinfI GANTC 9 cut(s) 215, 643, 687, 963, 1055, 1230, 1496, 1573, 1688
HpaII CCGG 4 cut(s) 111, 578, 1530, 1939
HphI GGTGA 3 cut(s) 48, 1463, 1885
Hpy166II GTNNAC 3 cut(s) 1083, 1513, 1692
Hpy188I TCNGA 9 cut(s) 487, 669, 822, 1495, 1505, 1659, 1703, 1710, 2049
Hpy8I GTNNAC 3 cut(s) 1083, 1513, 1692
HpyAV CCTTC 6 cut(s) 538, 886, 1315, 1672, 1757, 1921
HpyCH4III ACNGT 1 cut(s) 1517
HpyCH4IV ACGT 3 cut(s) 63, 568, 1429
HpyF10VI GCNNNNNNNGC 5 cut(s) 519, 533, 1542, 1551, 2011
HpyF3I CTNAG 5 cut(s) 222, 332, 1053, 1492, 1665
HpySE526I ACGT 3 cut(s) 63, 568, 1429
HspAI GCGC 1 cut(s) 394
Ksp22I TGATCA 1 cut(s) 835
Lsp1109I GCAGC 5 cut(s) 353, 497, 864, 1626, 2023
LweI GCATC 4 cut(s) 522, 1171, 1410, 1541
MaeI CTAG 5 cut(s) 897, 939, 1022, 1068, 1577
MaeII ACGT 3 cut(s) 63, 568, 1429
MaeIII GTNAC 3 cut(s) 569, 1847, 1864
MfeI CAATTG 1 cut(s) 1366
MflI RGATCY 4 cut(s) 150, 546, 664, 941
MhlI GDGCHC 5 cut(s) 234, 585, 605, 1728, 1987
MlyI GAGTC 3 cut(s) 652, 1064, 1697
MmeI TCCRAC 1 cut(s) 46
Mph1103I ATGCAT 2 cut(s) 1186, 1397
MroXI GAANNNNTTC 4 cut(s) 152, 1029, 1304, 1931
MseI TTAA 7 cut(s) 20, 84, 410, 693, 713, 743, 1433
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 1 cut(s) 510
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 4 cut(s) 111, 578, 1530, 1939
MspR9I CCNGG 3 cut(s) 249, 578, 1531
MunI CAATTG 1 cut(s) 1366
Mva1269I GAATGC 1 cut(s) 1493
MvaI CCWGG 1 cut(s) 249
MwoI GCNNNNNNNGC 5 cut(s) 519, 533, 1542, 1551, 2011
NciI CCSGG 2 cut(s) 578, 1531
NcoI CCATGG 3 cut(s) 479, 882, 1994
NdeI CATATG 2 cut(s) 1108, 1591
NlaIV GGNNCC 6 cut(s) 70, 101, 295, 709, 1221, 1535
NmuCI GTSAC 2 cut(s) 569, 1864
NsiI ATGCAT 2 cut(s) 1186, 1397
NspI RCATGY 1 cut(s) 1395
OliI CACNNNNGTG 1 cut(s) 578
PaeI GCATGC 1 cut(s) 1395
PagI TCATGA 1 cut(s) 1276
PctI GAATGC 1 cut(s) 1493
PdmI GAANNNNTTC 4 cut(s) 152, 1029, 1304, 1931
PfeI GAWTC 6 cut(s) 215, 687, 963, 1230, 1496, 1573
PflFI GACNNNGTC 1 cut(s) 1272
PflMI CCANNNNNTGG 3 cut(s) 65, 1046, 1995
PfoI TCCNGGA 1 cut(s) 1529
PinAI ACCGGT 1 cut(s) 110
PkrI GCNGC 8 cut(s) 10, 343, 509, 512, 879, 1425, 1616, 2013
PleI GAGTC 3 cut(s) 651, 1063, 1696
PpsI GAGTC 3 cut(s) 651, 1063, 1696
PpuMI RGGWCCY 2 cut(s) 649, 708
PshAI GACNNNNGTC 1 cut(s) 1137
Psp124BI GAGCTC 2 cut(s) 234, 1728
Psp1406I AACGTT 1 cut(s) 63
Psp5II RGGWCCY 2 cut(s) 649, 708
Psp6I CCWGG 1 cut(s) 247
PspFI CCCAGC 1 cut(s) 1988
PspGI CCWGG 1 cut(s) 247
PspN4I GGNNCC 6 cut(s) 70, 101, 295, 709, 1221, 1535
PspPI GGNCC 5 cut(s) 99, 254, 649, 708, 1998
PspPPI RGGWCCY 2 cut(s) 649, 708
PstNI CAGNNNCTG 1 cut(s) 510
PsuI RGATCY 4 cut(s) 150, 546, 664, 941
PsyI GACNNNGTC 1 cut(s) 1272
RsaI GTAC 2 cut(s) 453, 1512
RsaNI GTAC 2 cut(s) 452, 1511
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 2 cut(s) 234, 1728
SaqAI TTAA 7 cut(s) 20, 84, 410, 693, 713, 743, 1433
SatI GCNGC 8 cut(s) 9, 342, 508, 511, 878, 1424, 1615, 2012
Sau96I GGNCC 5 cut(s) 99, 254, 649, 708, 1998
ScaI AGTACT 1 cut(s) 453
SchI GAGTC 3 cut(s) 652, 1064, 1697
ScrFI CCNGG 3 cut(s) 249, 578, 1531
SduI GDGCHC 5 cut(s) 234, 585, 605, 1728, 1987
SfaNI GCATC 4 cut(s) 522, 1171, 1410, 1541
SfcI CTRYAG 3 cut(s) 1264, 1288, 1310
SinI GGWCC 3 cut(s) 99, 649, 708
SmiMI CAYNNNNRTG 1 cut(s) 578
SmlI CTYRAG 6 cut(s) 77, 227, 353, 712, 1540, 1624
SmoI CTYRAG 6 cut(s) 77, 227, 353, 712, 1540, 1624
SphI GCATGC 1 cut(s) 1395
SsiI CCGC 3 cut(s) 508, 1424, 1936
SspI AATATT 1 cut(s) 740
SspMI CTAG 5 cut(s) 897, 939, 1022, 1068, 1577
SstI GAGCTC 2 cut(s) 234, 1728
StyD4I CCNGG 3 cut(s) 247, 576, 1529
StyI CCWWGG 3 cut(s) 479, 882, 1994
TaaI ACNGT 1 cut(s) 1517
TaiI ACGT 3 cut(s) 66, 571, 1432
TaqI TCGA 6 cut(s) 136, 516, 901, 966, 1245, 1918
TatI WGTACW 2 cut(s) 451, 1510
TauI GCSGC 2 cut(s) 510, 1426
TfiI GAWTC 6 cut(s) 215, 687, 963, 1230, 1496, 1573
Tru1I TTAA 7 cut(s) 20, 84, 410, 693, 713, 743, 1433
Tru9I TTAA 7 cut(s) 20, 84, 410, 693, 713, 743, 1433
TscAI CASTG 1 cut(s) 1520
TseFI GTSAC 2 cut(s) 569, 1864
TseI GCWGC 6 cut(s) 8, 341, 510, 877, 1614, 2011
Tsp45I GTSAC 2 cut(s) 569, 1864
TspGWI ACGGA 1 cut(s) 115
TspRI CASTG 1 cut(s) 1520
Tth111I GACNNNGTC 1 cut(s) 1272
Van91I CCANNNNNTGG 3 cut(s) 65, 1046, 1995
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 3 cut(s) 99, 649, 708
XapI RAATTY 2 cut(s) 1704, 1888
XbaI TCTAGA 1 cut(s) 938
XceI RCATGY 1 cut(s) 1395
XmiI GTMKAC 1 cut(s) 1082
XmnI GAANNNNTTC 4 cut(s) 152, 1029, 1304, 1931
XspI CTAG 5 cut(s) 897, 939, 1022, 1068, 1577
ZrmI AGTACT 1 cut(s) 453
Zsp2I ATGCAT 2 cut(s) 1186, 1397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.