Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008222

Physical Location & Seq

Genomic Coordinates Forward (+)

22074916 .. 22077232

Gene Structure 2317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G219700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 984 bp

ATGGGATCGGTTCGTTTTTCCGGGATTTTATTAGCTTCATGCTTTTTGGTGATTTTAGGCCTCAGTGAAGCTCAGTTGCAGTTGGGTTTTTATGCCAAGAACTGCCCAAAAGCAGAGAAGATTGTGAAGGATTTTGTAGATGAACACATACACAATGCACCTTCAGTTGCAGCAGCCCTCATAAGAATGCACTTCCATGACTGCTTTGTCAGGGGTTGTGATGCATCTGTTCTTCTGAACTCAACTTCAAGTAACCAAGCTGAAAAAGTTGCCCCTCCAAATCTAACACTCAGAGGCTTTAACTTCATTGACAGAATCAAGACCCTACTTGAAGCTGAATGCCCTGGAGTAGTTTCTTGTGCAGATGCTATTGCTTTGGCAGCAAGAGACTCTATTGTAGCAACAGGAGGTCCATTTTGGAAGGTTCCAACAGGTAGAAGAGATGGGGTGATCTCAAGGAGAGCAGAAGCCTTAGCCAACATCCCAGCCCCAACTAGCAACTTCACCACTCTCCAAACCAGTTTTGGTAATCTTGGTCTTGATTTGATGGACTTGGTCTTGCTCTCAGGGGCTCACACAATTGGTATCTCTCATTGCTCATCATTTTCGAACCGTCTTTACAATTTCACCGGAGTGGGTGACCAGGACCCGGCTTTGGACAAGCAATACGCAGCGAATCTCAAGGCAAACAAGTGCAAAAGTTCAACTGATAATACTACAATAGTTGAAATGGACCCTGGAAGCCACAGGACATTTGACCTCAGCTACTACACACTTTTGCTCAAAAGACGAGGCCTCTTTCAATCTGATGCTGCTTTAACCACAAGCTCAACCACCCTTAATTATATCAACCAGCTCCTCAAAGGTCCACTTCAGAATTTCTATGACGAATTTGCCAAGTCCATGGAGAAAATGGGTCGGGTTAATGTTAAGACTGGATCAGCTGGTGAGATTAGGAAGCAATGTGCAGTTGTGAATAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005911 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009266 GO:0009269 GO:0009409 GO:0009414 GO:0009415 GO:0009505 GO:0009506 GO:0009628 GO:0009636 GO:0009651 GO:0009664 GO:0009987 GO:0010035 GO:0012505 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0042538 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1901700 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

328

Amino Acids

35.41

Weight (kDa)

8.53

Isoelectric Point (pI)

40.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05260
fragaria_vesca	FvH4_6g43500 FvH4_6g43500
malus_domestica	MD09G1105900.v1.1 MD17G1092400.v1.1 MD17G1093600.v1.1
prunus_persica	Prupe.3G219700_v2.0.a1
pyrus_communis	pycom09g02850 pycom17g08950 pycom17g09070
rosa_chinensis	RchiOBHm_Chr2g0160001
rosa_laevigata	RLG00000021191
rosa_multiflora	Rmu_sc0002023.1_g000018 Rmu_sc0006940.1_g000001 Rmu_sc0029076.1_g000002
rosa_roxburghii	Rroxscaffold_2G00090100
rosa_rugosa	Rorug02G0479600 Rorug02G0479700
rosa_samantha	Rh2AG546300 Rh2BG559600 Rh2CG529700 Rh2DG568300
rosa_wichuraiana	Rw2G045180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
AclWI	GGATC	2 cut(s)	13, 946
AcsI	RAATTY	2 cut(s)	877, 890
AcuI	CTGAAG	2 cut(s)	147, 857
AfiI	CCNNNNNNNGG	2 cut(s)	649, 655
AgsI	TTSAA	5 cut(s)	249, 332, 705, 728, 803
AjnI	CCWGG	3 cut(s)	343, 642, 736
AleI	CACNNNNGTG	1 cut(s)	632
AluBI	AGCT	9 cut(s)	35, 71, 260, 335, 765, 828, 856, 944, 981
AluI	AGCT	9 cut(s)	35, 71, 260, 335, 765, 828, 856, 944, 981
Alw26I	GTCTC	1 cut(s)	381
AlwI	GGATC	2 cut(s)	13, 946
AoxI	GGCC	2 cut(s)	58, 793
ApeKI	GCWGC	5 cut(s)	170, 173, 380, 671, 812
ApoI	RAATTY	2 cut(s)	877, 890
AspS9I	GGNCC	4 cut(s)	410, 646, 733, 866
AsuC2I	CCSGG	2 cut(s)	22, 650
AsuHPI	GGTGA	6 cut(s)	61, 460, 496, 619, 650, 959
AsuII	TTCGAA	1 cut(s)	608
AvaII	GGWCC	4 cut(s)	410, 646, 733, 866
BanII	GRGCYC	1 cut(s)	574
BbvCI	CCTCAGC	1 cut(s)	761
BbvI	GCAGC	5 cut(s)	182, 185, 392, 683, 799
BccI	CCATC	2 cut(s)	437, 541
BciT130I	CCWGG	3 cut(s)	345, 644, 738
BcnI	CCSGG	2 cut(s)	22, 650
BcoDI	GTCTC	1 cut(s)	381
BfaI	CTAG	2 cut(s)	495, 982
BisI	GCNGC	5 cut(s)	171, 174, 381, 672, 813
BlsI	GCNGC	5 cut(s)	172, 175, 382, 673, 814
Bme1390I	CCNGG	5 cut(s)	22, 345, 644, 650, 738
Bme18I	GGWCC	4 cut(s)	410, 646, 733, 866
BmgT120I	GGNCC	4 cut(s)	410, 646, 733, 866
BmiI	GGNNCC	3 cut(s)	426, 648, 735
BmrFI	CCNGG	5 cut(s)	22, 345, 644, 650, 738
BmsI	GCATC	4 cut(s)	211, 233, 355, 799
BpmI	CTGGAG	1 cut(s)	366
Bpu10I	CCTNAGC	2 cut(s)	472, 761
Bpu14I	TTCGAA	1 cut(s)	608
BpuEI	CTTGAG	2 cut(s)	439, 665
BpuMI	CCSGG	2 cut(s)	22, 650
BsaJI	CCNNGG	3 cut(s)	343, 736, 903
BsaWI	WCCGGW	1 cut(s)	629
Bsc4I	CCNNNNNNNGG	2 cut(s)	649, 655
Bse1I	ACTGG	2 cut(s)	519, 940
Bse3DI	GCAATG	2 cut(s)	592, 968
BseBI	CCWGG	3 cut(s)	345, 644, 738
BseDI	CCNNGG	3 cut(s)	343, 736, 903
BseGI	GGATG	1 cut(s)	480
BseLI	CCNNNNNNNGG	2 cut(s)	649, 655
BseMI	GCAATG	2 cut(s)	592, 968
BseMII	CTCAG	5 cut(s)	76, 86, 304, 579, 775
BseNI	ACTGG	2 cut(s)	519, 940
BseRI	GAGGAG	1 cut(s)	848
BseXI	GCAGC	5 cut(s)	182, 185, 392, 683, 799
BseYI	CCCAGC	1 cut(s)	484
BsgI	GTGCAG	1 cut(s)	381
BshFI	GGCC	2 cut(s)	60, 795
BsiSI	CCGG	3 cut(s)	21, 630, 650
BslI	CCNNNNNNNGG	2 cut(s)	649, 655
BsmAI	GTCTC	1 cut(s)	381
BsmI	GAATGC	2 cut(s)	192, 344
BsnI	GGCC	2 cut(s)	60, 795
Bsp119I	TTCGAA	1 cut(s)	608
Bsp1286I	GDGCHC	1 cut(s)	574
Bsp143I	GATC	3 cut(s)	5, 450, 938
Bsp19I	CCATGG	1 cut(s)	903
BspANI	GGCC	2 cut(s)	60, 795
BspCNI	CTCAG	5 cut(s)	75, 85, 303, 578, 774
BspLI	GGNNCC	3 cut(s)	426, 648, 735
BspPI	GGATC	2 cut(s)	13, 946
BspT104I	TTCGAA	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	592, 968
BsrI	ACTGG	2 cut(s)	519, 940
BssECI	CCNNGG	3 cut(s)	343, 736, 903
BssMI	GATC	3 cut(s)	5, 450, 938
BssT1I	CCWWGG	1 cut(s)	903
Bst2UI	CCWGG	3 cut(s)	345, 644, 738
Bst4CI	ACNGT	1 cut(s)	614
Bst6I	CTCTTC	1 cut(s)	433
BstBI	TTCGAA	1 cut(s)	608
BstDEI	CTNAG	6 cut(s)	62, 72, 290, 472, 565, 761
BstDSI	CCRYGG	1 cut(s)	903
BstEII	GGTNACC	1 cut(s)	638
BstF5I	GGATG	1 cut(s)	480
BstKTI	GATC	3 cut(s)	8, 453, 941
BstMAI	GTCTC	1 cut(s)	381
BstMBI	GATC	3 cut(s)	5, 450, 938
BstMWI	GCNNNNNNNGC	1 cut(s)	380
BstNI	CCWGG	3 cut(s)	345, 644, 738
BstPI	GGTNACC	1 cut(s)	638
BstSCI	CCNGG	5 cut(s)	20, 343, 642, 648, 736
BstV1I	GCAGC	5 cut(s)	182, 185, 392, 683, 799
BstXI	CCANNNNNNTGG	1 cut(s)	904
BsuRI	GGCC	2 cut(s)	60, 795
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	1 cut(s)	480
BtsIMutI	CAGTG	1 cut(s)	70
Cfr13I	GGNCC	4 cut(s)	410, 646, 733, 866
CviAII	CATG	3 cut(s)	39, 197, 904
DdeI	CTNAG	6 cut(s)	62, 72, 290, 472, 565, 761
DpnI	GATC	3 cut(s)	7, 452, 940
DpnII	GATC	3 cut(s)	5, 450, 938
DrdI	GACNNNNNNGTC	1 cut(s)	206
DseDI	GACNNNNNNGTC	1 cut(s)	206
Eam1104I	CTCTTC	1 cut(s)	433
EarI	CTCTTC	1 cut(s)	433
Eco130I	CCWWGG	1 cut(s)	903
Eco147I	AGGCCT	2 cut(s)	60, 795
Eco24I	GRGCYC	1 cut(s)	574
Eco47I	GGWCC	4 cut(s)	410, 646, 733, 866
Eco57I	CTGAAG	2 cut(s)	147, 857
Eco91I	GGTNACC	1 cut(s)	638
EcoO109I	RGGNCCY	1 cut(s)	646
EcoO65I	GGTNACC	1 cut(s)	638
EcoRII	CCWGG	3 cut(s)	343, 642, 736
EcoT14I	CCWWGG	1 cut(s)	903
EcoT22I	ATGCAT	1 cut(s)	226
EcoT38I	GRGCYC	1 cut(s)	574
ErhI	CCWWGG	1 cut(s)	903
FaeI	CATG	3 cut(s)	42, 200, 907
FaiI	YATR	8 cut(s)	40, 93, 149, 182, 198, 846, 885, 905
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FatI	CATG	3 cut(s)	38, 196, 903
Fnu4HI	GCNGC	5 cut(s)	171, 174, 381, 672, 813
FokI	GGATG	1 cut(s)	467
FriOI	GRGCYC	1 cut(s)	574
Fsp4HI	GCNGC	5 cut(s)	171, 174, 381, 672, 813
FspBI	CTAG	2 cut(s)	495, 982
GluI	GCNGC	5 cut(s)	171, 174, 381, 672, 813
GsaI	CCCAGC	1 cut(s)	488
GsuI	CTGGAG	1 cut(s)	366
HaeIII	GGCC	2 cut(s)	60, 795
HapII	CCGG	3 cut(s)	21, 630, 650
Hin1II	CATG	3 cut(s)	42, 200, 907
HinfI	GANTC	3 cut(s)	315, 389, 676
HpaII	CCGG	3 cut(s)	21, 630, 650
HphI	GGTGA	6 cut(s)	61, 460, 496, 619, 650, 959
Hpy166II	GTNNAC	1 cut(s)	869
Hpy188I	TCNGA	4 cut(s)	237, 293, 808, 876
Hpy188III	TCNNGA	2 cut(s)	319, 539
Hpy8I	GTNNAC	1 cut(s)	869
HpyAV	CCTTC	3 cut(s)	121, 171, 415
HpyCH4III	ACNGT	1 cut(s)	614
HpyCH4V	TGCA	8 cut(s)	79, 158, 170, 190, 224, 362, 696, 968
HpyF10VI	GCNNNNNNNGC	1 cut(s)	380
HpyF3I	CTNAG	6 cut(s)	62, 72, 290, 472, 565, 761
Hsp92II	CATG	3 cut(s)	42, 200, 907
Kzo9I	GATC	3 cut(s)	5, 450, 938
LmnI	GCTCC	1 cut(s)	861
Lsp1109I	GCAGC	5 cut(s)	182, 185, 392, 683, 799
LweI	GCATC	4 cut(s)	211, 233, 355, 799
MaeI	CTAG	2 cut(s)	495, 982
MaeIII	GTNAC	2 cut(s)	251, 638
MalI	GATC	3 cut(s)	7, 452, 940
MboI	GATC	3 cut(s)	5, 450, 938
MboII	GAAGA	3 cut(s)	130, 224, 450
MfeI	CAATTG	1 cut(s)	579
MhlI	GDGCHC	1 cut(s)	574
MluCI	AATT	5 cut(s)	579, 622, 841, 877, 890
MlyI	GAGTC	1 cut(s)	383
MmeI	TCCRAC	1 cut(s)	452
MnlI	CCTC	9 cut(s)	71, 188, 285, 287, 401, 770, 785, 806, 869
Mph1103I	ATGCAT	1 cut(s)	226
MseI	TTAA	5 cut(s)	300, 818, 840, 924, 930
MslI	CAYNNNNRTG	3 cut(s)	185, 195, 632
MspA1I	CMGCKG	1 cut(s)	944
MspI	CCGG	3 cut(s)	21, 630, 650
MspR9I	CCNGG	5 cut(s)	22, 345, 644, 650, 738
MunI	CAATTG	1 cut(s)	579
Mva1269I	GAATGC	2 cut(s)	192, 344
MvaI	CCWGG	3 cut(s)	345, 644, 738
MwoI	GCNNNNNNNGC	1 cut(s)	380
NciI	CCSGG	2 cut(s)	22, 650
NcoI	CCATGG	1 cut(s)	903
NdeII	GATC	3 cut(s)	5, 450, 938
NlaIII	CATG	3 cut(s)	42, 200, 907
NlaIV	GGNNCC	3 cut(s)	426, 648, 735
NmuCI	GTSAC	1 cut(s)	638
NsiI	ATGCAT	1 cut(s)	226
NspV	TTCGAA	1 cut(s)	608
OliI	CACNNNNGTG	1 cut(s)	632
PceI	AGGCCT	2 cut(s)	60, 795
PctI	GAATGC	2 cut(s)	192, 344
PfeI	GAWTC	2 cut(s)	315, 676
PflFI	GACNNNGTC	1 cut(s)	554
PfoI	TCCNGGA	1 cut(s)	20
PkrI	GCNGC	5 cut(s)	172, 175, 382, 673, 814
PleI	GAGTC	1 cut(s)	383
PpsI	GAGTC	1 cut(s)	383
PpuMI	RGGWCCY	1 cut(s)	646
Psp5II	RGGWCCY	1 cut(s)	646
Psp6I	CCWGG	3 cut(s)	343, 642, 736
PspEI	GGTNACC	1 cut(s)	638
PspFI	CCCAGC	1 cut(s)	484
PspGI	CCWGG	3 cut(s)	343, 642, 736
PspN4I	GGNNCC	3 cut(s)	426, 648, 735
PspPI	GGNCC	4 cut(s)	410, 646, 733, 866
PspPPI	RGGWCCY	1 cut(s)	646
PsrI	GAACNNNNNNTAC	2 cut(s)	602, 634
PsyI	GACNNNGTC	1 cut(s)	554
PvuII	CAGCTG	1 cut(s)	944
RseI	CAYNNNNRTG	3 cut(s)	185, 195, 632
SaqAI	TTAA	5 cut(s)	300, 818, 840, 924, 930
SatI	GCNGC	5 cut(s)	171, 174, 381, 672, 813
Sau3AI	GATC	3 cut(s)	5, 450, 938
Sau96I	GGNCC	4 cut(s)	410, 646, 733, 866
SchI	GAGTC	1 cut(s)	383
ScrFI	CCNGG	5 cut(s)	22, 345, 644, 650, 738
SduI	GDGCHC	1 cut(s)	574
SfaNI	GCATC	4 cut(s)	211, 233, 355, 799
SfuI	TTCGAA	1 cut(s)	608
SinI	GGWCC	4 cut(s)	410, 646, 733, 866
SmiMI	CAYNNNNRTG	3 cut(s)	185, 195, 632
SmlI	CTYRAG	2 cut(s)	454, 680
SmoI	CTYRAG	2 cut(s)	454, 680
Sse9I	AATT	5 cut(s)	579, 622, 841, 877, 890
SseBI	AGGCCT	2 cut(s)	60, 795
SspMI	CTAG	2 cut(s)	495, 982
StuI	AGGCCT	2 cut(s)	60, 795
StyD4I	CCNGG	5 cut(s)	20, 343, 642, 648, 736
StyI	CCWWGG	1 cut(s)	903
TaaI	ACNGT	1 cut(s)	614
TaqI	TCGA	1 cut(s)	608
TasI	AATT	5 cut(s)	579, 622, 841, 877, 890
TfiI	GAWTC	2 cut(s)	315, 676
Tru1I	TTAA	5 cut(s)	300, 818, 840, 924, 930
Tru9I	TTAA	5 cut(s)	300, 818, 840, 924, 930
TscAI	CASTG	1 cut(s)	70
TseFI	GTSAC	1 cut(s)	638
TseI	GCWGC	5 cut(s)	170, 173, 380, 671, 812
Tsp45I	GTSAC	1 cut(s)	638
TspDTI	ATGAA	3 cut(s)	27, 156, 295
TspRI	CASTG	1 cut(s)	70
Tth111I	GACNNNGTC	1 cut(s)	554
VpaK11BI	GGWCC	4 cut(s)	410, 646, 733, 866
XapI	RAATTY	2 cut(s)	877, 890
XcmI	CCANNNNNNNNNTGG	2 cut(s)	521, 910
XspI	CTAG	2 cut(s)	495, 982
Zsp2I	ATGCAT	1 cut(s)	226

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.