Prupe.3G235200_v2.0.a1

Protein of unknown function (DUF789)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23056132 .. 23060948
4817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G235200.2

Sequence Viewer

Length: 972 bp
ATGATTTTGGACAAAGGGTCAATGCAATCAAACCTTGAGTGCTTCCTCCATTGTACAACACCAGTGCTCCAATCCCAATTCCTACCCAAGTCTGAGATTAGGAACCTCAACCGTATATGGCACCCATGGGAGAGAGAAAAGGTTGAGTATTTCACATTGAGTGATCTCTGGAATTGTTATGATGAATGGAGTGCATATGGTGCTGGAGTTCCTATTGCCTTGGACAGCGGCGAGACCCTTGTGCAGTACTATGTGCCTTATCTCTCTGCTATTCAAATTTTCACCAGCAATTCATCTGTGAATAGCTTCAGGGAAGAGGCTGAGTCGGGTGACTGTGAGACAAGGGATTCGTTTAGTGATTCATGCAGTTTTGAGAGTGAAAGTGATAAATGGAGATGGGATGGATGCTCCTCAGAAGATGGTGGGTTTGAGCAAGACAATCTCTGGCATGTGAATGATAGATTAGGGTACCTATATTTCGAGTATTTTGAGAGATCAACTCCCTATGGAAGAGTTCCTCTCATGGATAAGATCAATACATTAGCTCAAAGATACCCTGGCTTGATGTCATTGAGGAGTGTTGATCTATCACCAGCTAGTTGGATGGCTGTTGCTTGGTACCCAATTTATCACATTCCCATGGGAAGGACAATAAAGGATCTGTCCACGTCCTTCCTCACTTACCACACCCTTTCATCTTCTTTTCAAGACATGGACCTCGAGGACGATATGGAAAGCGATGAACAAAGGAAGCGAAAGAAAGGGGAAAGCATCTCTCTCCCTCCATTTGGCTTGGCCACTTATAAGATGCAAGGGAATGTGTGGGTCTCAGGCAATTGTGGAAGGGACCAAGAAAGGCTCATGTCACTATTGAGCGTGGCTGATTCTTGGCTAAAGCAACTTAGGGTCCAGCACCACGACTACAACTACTTCACGGCCATTCGGCGTGGTGGCCAGTGCCACTACTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

324

Amino Acids

37.54

Weight (kDa)

4.96

Isoelectric Point (pI)

56.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012257)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 804
AbsI CCTCGAGG 1 cut(s) 719
Acc65I GGTACC 2 cut(s) 468, 618
AccB1I GGYRCC 3 cut(s) 120, 468, 618
AciI CCGC 1 cut(s) 228
AclWI GGATC 1 cut(s) 666
AcoI YGGCCR 3 cut(s) 795, 936, 952
AcsI RAATTY 1 cut(s) 276
AcuI CTGAAG 1 cut(s) 292
AfaI GTAC 4 cut(s) 55, 248, 470, 620
AfiI CCNNNNNNNGG 2 cut(s) 645, 788
AgsI TTSAA 2 cut(s) 275, 707
AhdI GACNNNNNGTC 1 cut(s) 16
AjiI CACGTC 1 cut(s) 669
AjnI CCWGG 1 cut(s) 556
AluBI AGCT 3 cut(s) 306, 545, 596
AluI AGCT 3 cut(s) 306, 545, 596
Alw21I GWGCWC 1 cut(s) 69
Alw26I GTCTC 3 cut(s) 227, 332, 832
AlwI GGATC 1 cut(s) 666
Ama87I CYCGRG 1 cut(s) 719
AoxI GGCC 3 cut(s) 795, 936, 952
ApoI RAATTY 1 cut(s) 276
ArsI GACNNNNNNTTYG 2 cut(s) 331, 363
Asp700I GAANNNNTTC 1 cut(s) 305
Asp718I GGTACC 2 cut(s) 468, 618
AspS9I GGNCC 3 cut(s) 715, 847, 907
AsuHPI GGTGA 3 cut(s) 274, 341, 582
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 3 cut(s) 715, 847, 907
BalI TGGCCA 2 cut(s) 797, 954
BanI GGYRCC 3 cut(s) 120, 468, 618
Bbv12I GWGCWC 1 cut(s) 69
BccI CCATC 4 cut(s) 390, 395, 413, 598
BceAI ACGGC 1 cut(s) 951
BciT130I CCWGG 1 cut(s) 558
BcoDI GTCTC 3 cut(s) 227, 332, 832
BfaI CTAG 1 cut(s) 597
BisI GCNGC 1 cut(s) 229
BlsI GCNGC 1 cut(s) 230
BmcAI AGTACT 1 cut(s) 248
Bme1390I CCNGG 1 cut(s) 558
Bme18I GGWCC 3 cut(s) 715, 847, 907
BmeRI GACNNNNNGTC 1 cut(s) 16
BmeT110I CYCGRG 1 cut(s) 719
BmgBI CACGTC 1 cut(s) 669
BmgT120I GGNCC 3 cut(s) 715, 847, 907
BmiI GGNNCC 6 cut(s) 104, 122, 470, 620, 848, 908
BmrFI CCNGG 1 cut(s) 558
BmsI GCATC 3 cut(s) 395, 780, 798
BplI GAGNNNNNCTC 4 cut(s) 484, 516, 504, 536
BpmI CTGGAG 1 cut(s) 225
BpuEI CTTGAG 1 cut(s) 56
BsaI GGTCTC 2 cut(s) 227, 832
BsaJI CCNNGG 4 cut(s) 125, 219, 556, 639
BsaXI ACNNNNNCTCC 2 cut(s) 51, 81
Bsc4I CCNNNNNNNGG 2 cut(s) 645, 788
Bse1I ACTGG 2 cut(s) 62, 955
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 4 cut(s) 125, 219, 556, 639
BseGI GGATG 3 cut(s) 406, 410, 609
BseLI CCNNNNNNNGG 2 cut(s) 645, 788
BseMII CTCAG 4 cut(s) 84, 312, 426, 843
BseNI ACTGG 2 cut(s) 62, 955
BseRI GAGGAG 2 cut(s) 400, 589
BsgI GTGCAG 1 cut(s) 263
BshFI GGCC 3 cut(s) 797, 938, 954
BshNI GGYRCC 3 cut(s) 120, 468, 618
BsiHKAI GWGCWC 1 cut(s) 69
BsiHKCI CYCGRG 1 cut(s) 719
BslFI GGGAC 1 cut(s) 860
BslI CCNNNNNNNGG 2 cut(s) 645, 788
BsmAI GTCTC 3 cut(s) 227, 332, 832
BsmFI GGGAC 1 cut(s) 860
BsnI GGCC 3 cut(s) 797, 938, 954
Bso31I GGTCTC 2 cut(s) 227, 832
BsoBI CYCGRG 1 cut(s) 719
Bsp1286I GDGCHC 1 cut(s) 69
Bsp1407I TGTACA 1 cut(s) 53
Bsp143I GATC 5 cut(s) 163, 494, 531, 583, 658
Bsp19I CCATGG 2 cut(s) 125, 639
BspACI CCGC 1 cut(s) 228
BspANI GGCC 3 cut(s) 797, 938, 954
BspCNI CTCAG 4 cut(s) 85, 313, 425, 842
BspLI GGNNCC 6 cut(s) 104, 122, 470, 620, 848, 908
BspPI GGATC 1 cut(s) 666
BspT107I GGYRCC 3 cut(s) 120, 468, 618
BspTNI GGTCTC 2 cut(s) 227, 832
BsrGI TGTACA 1 cut(s) 53
BsrI ACTGG 2 cut(s) 62, 955
BssECI CCNNGG 4 cut(s) 125, 219, 556, 639
BssMI GATC 5 cut(s) 163, 494, 531, 583, 658
BssT1I CCWWGG 3 cut(s) 125, 219, 639
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 2 cut(s) 113, 335
Bst6I CTCTTC 2 cut(s) 309, 505
BstAPI GCANNNNNTGC 1 cut(s) 200
BstAUI TGTACA 1 cut(s) 53
BstDEI CTNAG 5 cut(s) 93, 321, 412, 829, 902
BstDSI CCRYGG 2 cut(s) 125, 639
BstF5I GGATG 3 cut(s) 406, 410, 609
BstKTI GATC 5 cut(s) 166, 497, 534, 586, 661
BstMAI GTCTC 3 cut(s) 227, 332, 832
BstMBI GATC 5 cut(s) 163, 494, 531, 583, 658
BstMWI GCNNNNNNNGC 1 cut(s) 200
BstNI CCWGG 1 cut(s) 558
BstNSI RCATGY 1 cut(s) 452
BstSCI CCNGG 1 cut(s) 556
BstX2I RGATCY 1 cut(s) 658
BstXI CCANNNNNNTGG 1 cut(s) 600
BstYI RGATCY 1 cut(s) 658
BsuRI GGCC 3 cut(s) 797, 938, 954
BtgI CCRYGG 2 cut(s) 125, 639
BtgZI GCGATG 1 cut(s) 753
BtrI CACGTC 1 cut(s) 669
BtsCI GGATG 3 cut(s) 406, 410, 609
BtsIMutI CAGTG 2 cut(s) 69, 962
Cfr13I GGNCC 3 cut(s) 715, 847, 907
Csp6I GTAC 4 cut(s) 54, 247, 469, 619
CspCI CAANNNNNGTGG 1 cut(s) 950
CviAII CATG 7 cut(s) 126, 363, 449, 523, 640, 712, 862
CviQI GTAC 4 cut(s) 54, 247, 469, 619
DdeI CTNAG 5 cut(s) 93, 321, 412, 829, 902
DpnI GATC 5 cut(s) 165, 496, 533, 585, 660
DpnII GATC 5 cut(s) 163, 494, 531, 583, 658
DriI GACNNNNNGTC 1 cut(s) 16
EaeI YGGCCR 3 cut(s) 795, 936, 952
Eam1104I CTCTTC 2 cut(s) 309, 505
Eam1105I GACNNNNNGTC 1 cut(s) 16
EarI CTCTTC 2 cut(s) 309, 505
Eco130I CCWWGG 3 cut(s) 125, 219, 639
Eco31I GGTCTC 2 cut(s) 227, 832
Eco47I GGWCC 3 cut(s) 715, 847, 907
Eco57I CTGAAG 1 cut(s) 292
Eco88I CYCGRG 1 cut(s) 719
EcoRII CCWGG 1 cut(s) 556
EcoT14I CCWWGG 3 cut(s) 125, 219, 639
ErhI CCWWGG 3 cut(s) 125, 219, 639
FaeI CATG 7 cut(s) 129, 366, 452, 526, 643, 715, 865
FaqI GGGAC 1 cut(s) 860
FatI CATG 7 cut(s) 125, 362, 448, 522, 639, 711, 861
FauNDI CATATG 1 cut(s) 196
Fnu4HI GCNGC 1 cut(s) 229
FokI GGATG 3 cut(s) 413, 417, 616
Fsp4HI GCNGC 1 cut(s) 229
FspBI CTAG 1 cut(s) 597
GluI GCNGC 1 cut(s) 229
GsuI CTGGAG 1 cut(s) 225
HaeIII GGCC 3 cut(s) 797, 938, 954
Hin1II CATG 7 cut(s) 129, 366, 452, 526, 643, 715, 865
HinfI GANTC 4 cut(s) 323, 347, 359, 884
HphI GGTGA 3 cut(s) 274, 341, 582
Hpy166II GTNNAC 1 cut(s) 666
Hpy188I TCNGA 2 cut(s) 94, 415
Hpy188III TCNNGA 2 cut(s) 169, 707
Hpy8I GTNNAC 1 cut(s) 666
HpyAV CCTTC 3 cut(s) 639, 682, 837
HpyCH4III ACNGT 2 cut(s) 113, 335
HpyCH4IV ACGT 1 cut(s) 668
HpyCH4V TGCA 5 cut(s) 25, 194, 244, 366, 811
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 5 cut(s) 93, 321, 412, 829, 902
HpySE526I ACGT 1 cut(s) 668
Hsp92II CATG 7 cut(s) 129, 366, 452, 526, 643, 715, 865
KpnI GGTACC 2 cut(s) 472, 622
Kzo9I GATC 5 cut(s) 163, 494, 531, 583, 658
LmnI GCTCC 2 cut(s) 72, 413
LweI GCATC 3 cut(s) 395, 780, 798
MaeI CTAG 1 cut(s) 597
MaeII ACGT 1 cut(s) 668
MaeIII GTNAC 2 cut(s) 329, 864
MalI GATC 5 cut(s) 165, 496, 533, 585, 660
MboI GATC 5 cut(s) 163, 494, 531, 583, 658
MboII GAAGA 4 cut(s) 326, 428, 522, 690
MfeI CAATTG 1 cut(s) 835
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 1 cut(s) 69
MlsI TGGCCA 2 cut(s) 797, 954
MluCI AATT 6 cut(s) 77, 172, 276, 289, 624, 835
MluNI TGGCCA 2 cut(s) 797, 954
MlyI GAGTC 1 cut(s) 332
MmeI TCCRAC 1 cut(s) 581
Mox20I TGGCCA 2 cut(s) 797, 954
MroXI GAANNNNTTC 1 cut(s) 305
MscI TGGCCA 2 cut(s) 797, 954
MslI CAYNNNNRTG 2 cut(s) 453, 638
Msp20I TGGCCA 2 cut(s) 797, 954
MspA1I CMGCKG 1 cut(s) 228
MspR9I CCNGG 1 cut(s) 558
MunI CAATTG 1 cut(s) 835
MvaI CCWGG 1 cut(s) 558
MwoI GCNNNNNNNGC 1 cut(s) 200
NcoI CCATGG 2 cut(s) 125, 639
NdeI CATATG 1 cut(s) 196
NdeII GATC 5 cut(s) 163, 494, 531, 583, 658
NlaIII CATG 7 cut(s) 129, 366, 452, 526, 643, 715, 865
NlaIV GGNNCC 6 cut(s) 104, 122, 470, 620, 848, 908
NmuCI GTSAC 2 cut(s) 329, 864
NspI RCATGY 1 cut(s) 452
PaeR7I CTCGAG 1 cut(s) 719
PdmI GAANNNNTTC 1 cut(s) 305
PfeI GAWTC 3 cut(s) 347, 359, 884
PkrI GCNGC 1 cut(s) 230
PleI GAGTC 1 cut(s) 331
PpsI GAGTC 1 cut(s) 331
PsiI TTATAA 1 cut(s) 804
Psp6I CCWGG 1 cut(s) 556
PspGI CCWGG 1 cut(s) 556
PspN4I GGNNCC 6 cut(s) 104, 122, 470, 620, 848, 908
PspPI GGNCC 3 cut(s) 715, 847, 907
PspXI VCTCGAGB 1 cut(s) 719
PsuI RGATCY 1 cut(s) 658
RsaI GTAC 4 cut(s) 55, 248, 470, 620
RsaNI GTAC 4 cut(s) 54, 247, 469, 619
RseI CAYNNNNRTG 2 cut(s) 453, 638
SatI GCNGC 1 cut(s) 229
Sau3AI GATC 5 cut(s) 163, 494, 531, 583, 658
Sau96I GGNCC 3 cut(s) 715, 847, 907
ScaI AGTACT 1 cut(s) 248
SchI GAGTC 1 cut(s) 332
ScrFI CCNGG 1 cut(s) 558
SduI GDGCHC 1 cut(s) 69
SetI ASST 9 cut(s) 36, 108, 144, 308, 474, 547, 598, 671, 720
SfaNI GCATC 3 cut(s) 395, 780, 798
Sfr274I CTCGAG 1 cut(s) 719
SinI GGWCC 3 cut(s) 715, 847, 907
SlaI CTCGAG 1 cut(s) 719
SmiMI CAYNNNNRTG 2 cut(s) 453, 638
SmlI CTYRAG 2 cut(s) 35, 719
SmoI CTYRAG 2 cut(s) 35, 719
Sse9I AATT 6 cut(s) 77, 172, 276, 289, 624, 835
SsiI CCGC 1 cut(s) 228
SspMI CTAG 1 cut(s) 597
StyD4I CCNGG 1 cut(s) 556
StyI CCWWGG 3 cut(s) 125, 219, 639
TaaI ACNGT 2 cut(s) 113, 335
TaiI ACGT 1 cut(s) 671
TaqI TCGA 2 cut(s) 480, 720
TasI AATT 6 cut(s) 77, 172, 276, 289, 624, 835
TatI WGTACW 2 cut(s) 53, 246
TauI GCSGC 1 cut(s) 231
TfiI GAWTC 3 cut(s) 347, 359, 884
TscAI CASTG 2 cut(s) 69, 962
TseFI GTSAC 2 cut(s) 329, 864
Tsp45I GTSAC 2 cut(s) 329, 864
TspDTI ATGAA 5 cut(s) 198, 282, 351, 684, 756
TspRI CASTG 2 cut(s) 69, 962
VpaK11BI GGWCC 3 cut(s) 715, 847, 907
XapI RAATTY 1 cut(s) 276
XceI RCATGY 1 cut(s) 452
XhoI CTCGAG 1 cut(s) 719
XmnI GAANNNNTTC 1 cut(s) 305
XspI CTAG 1 cut(s) 597
ZrmI AGTACT 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.