Prupe.3G245300_v2.0.a1

Protein GLUTAMINE DUMPER

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0015855
Physical Location & Seq
Forward (+)
23700379 .. 23701810
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G245300.1

Sequence Viewer

Length: 342 bp
ATGAGGCCTTCAGCAAACTCCACCTCTGCGGCTACTGGCCAGGATGCCGTGCTCAGAAACTGGAAGTCTCCAATACCATACCTCTTCGGTGGCCTAGCCCTCATGTTGGGGCTCGTCGCGGTTGCACTGCTGATTCTTGCTTGCTCCTTCCACAAAACGCCGTCGTCCAACAGCTCAACAAGCAGTGATGCAGATCAAGATCAGAAACCAACTAGGCCAGTGGACATAGAGGCTGCAGATTCTGAGCCCAAGATTGTTGTCATAATGGCTGGAGAGAAAACAGCAACATACTTGGCCAAGCCAATGTGTTCCAATACTTACCAAACCGATCAAAGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

114

Amino Acids

11.96

Weight (kDa)

5.65

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015855)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25760
fragaria_vesca FvH4_6g45911
malus_domestica MD09G1078900.v1.1 MD17G1069200.v1.1
prunus_persica Prupe.3G245300_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0164101
rosa_laevigata RLG00000021438
rosa_multiflora Rmu_co8293903.1_g000001
rosa_roxburghii Rroxscaffold_2G00086760
rosa_rugosa Rorug02G0506600
rosa_samantha Rh2AG574900 Rh2BG585400 Rh2CG556300 Rh2DG595100
rosa_wichuraiana Rw2G047560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 119
AciI CCGC 2 cut(s) 29, 119
AcoI YGGCCR 2 cut(s) 37, 294
AfiI CCNNNNNNNGG 1 cut(s) 106
AjnI CCWGG 1 cut(s) 39
AluBI AGCT 1 cut(s) 174
AluI AGCT 1 cut(s) 174
Alw21I GWGCWC 1 cut(s) 54
Alw26I GTCTC 1 cut(s) 72
AlwNI CAGNNNCTG 2 cut(s) 60, 242
AoxI GGCC 5 cut(s) 5, 37, 91, 215, 294
ApeKI GCWGC 1 cut(s) 233
BalI TGGCCA 2 cut(s) 39, 296
BanII GRGCYC 2 cut(s) 114, 249
Bbv12I GWGCWC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 220
BceAI ACGGC 2 cut(s) 32, 145
BciT130I CCWGG 1 cut(s) 41
BcoDI GTCTC 1 cut(s) 72
BfaI CTAG 2 cut(s) 95, 213
BfmI CTRYAG 1 cut(s) 234
BisI GCNGC 2 cut(s) 30, 234
BlsI GCNGC 2 cut(s) 31, 235
Bme1390I CCNGG 1 cut(s) 41
BmrFI CCNGG 1 cut(s) 41
BmsI GCATC 2 cut(s) 34, 178
BpmI CTGGAG 1 cut(s) 291
BsaBI GATNNNNATC 2 cut(s) 192, 198
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse1I ACTGG 3 cut(s) 40, 65, 218
Bse8I GATNNNNATC 2 cut(s) 192, 198
BseBI CCWGG 1 cut(s) 41
BseGI GGATG 1 cut(s) 49
BseJI GATNNNNATC 2 cut(s) 192, 198
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMII CTCAG 2 cut(s) 67, 234
BseNI ACTGG 3 cut(s) 40, 65, 218
BseXI GCAGC 1 cut(s) 220
Bsh1236I CGCG 1 cut(s) 119
BshFI GGCC 5 cut(s) 7, 39, 93, 217, 296
BsiHKAI GWGCWC 1 cut(s) 54
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 1 cut(s) 72
BsnI GGCC 5 cut(s) 7, 39, 93, 217, 296
Bsp1286I GDGCHC 3 cut(s) 54, 114, 249
Bsp143I GATC 3 cut(s) 193, 199, 328
BspACI CCGC 2 cut(s) 29, 119
BspANI GGCC 5 cut(s) 7, 39, 93, 217, 296
BspCNI CTCAG 2 cut(s) 66, 235
BspFNI CGCG 1 cut(s) 119
BspMAI CTGCAG 1 cut(s) 238
BsrI ACTGG 3 cut(s) 40, 65, 218
BssMI GATC 3 cut(s) 193, 199, 328
Bst2UI CCWGG 1 cut(s) 41
Bst6I CTCTTC 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 142
BstDEI CTNAG 2 cut(s) 53, 243
BstF5I GGATG 1 cut(s) 49
BstFNI CGCG 1 cut(s) 119
BstKTI GATC 3 cut(s) 196, 202, 331
BstMAI GTCTC 1 cut(s) 72
BstMBI GATC 3 cut(s) 193, 199, 328
BstMWI GCNNNNNNNGC 1 cut(s) 180
BstNI CCWGG 1 cut(s) 41
BstSCI CCNGG 1 cut(s) 39
BstSFI CTRYAG 1 cut(s) 234
BstUI CGCG 1 cut(s) 119
BstV1I GCAGC 1 cut(s) 220
BsuRI GGCC 5 cut(s) 7, 39, 93, 217, 296
BtsCI GGATG 1 cut(s) 49
BtsI GCAGTG 2 cut(s) 125, 190
BtsIMutI CAGTG 3 cut(s) 125, 190, 225
Cac8I GCNNGC 1 cut(s) 142
CaiI CAGNNNCTG 2 cut(s) 60, 242
CviAII CATG 1 cut(s) 103
DdeI CTNAG 2 cut(s) 53, 243
DpnI GATC 3 cut(s) 195, 201, 330
DpnII GATC 3 cut(s) 193, 199, 328
EaeI YGGCCR 2 cut(s) 37, 294
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
Eco147I AGGCCT 1 cut(s) 7
Eco24I GRGCYC 2 cut(s) 114, 249
EcoRII CCWGG 1 cut(s) 39
EcoT38I GRGCYC 2 cut(s) 114, 249
FaeI CATG 1 cut(s) 106
FaiI YATR 5 cut(s) 79, 104, 227, 263, 289
FatI CATG 1 cut(s) 102
Fnu4HI GCNGC 2 cut(s) 30, 234
FokI GGATG 1 cut(s) 56
FriOI GRGCYC 2 cut(s) 114, 249
Fsp4HI GCNGC 2 cut(s) 30, 234
FspBI CTAG 2 cut(s) 95, 213
GluI GCNGC 2 cut(s) 30, 234
GsuI CTGGAG 1 cut(s) 291
HaeIII GGCC 5 cut(s) 7, 39, 93, 217, 296
Hin1II CATG 1 cut(s) 106
HinfI GANTC 2 cut(s) 133, 239
Hpy166II GTNNAC 1 cut(s) 223
Hpy188I TCNGA 3 cut(s) 56, 204, 244
Hpy188III TCNNGA 1 cut(s) 197
Hpy8I GTNNAC 1 cut(s) 223
Hpy99I CGWCG 2 cut(s) 119, 166
HpyAV CCTTC 2 cut(s) 18, 157
HpyCH4V TGCA 3 cut(s) 125, 191, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 180
HpyF3I CTNAG 2 cut(s) 53, 243
Hsp92II CATG 1 cut(s) 106
Kzo9I GATC 3 cut(s) 193, 199, 328
LmnI GCTCC 1 cut(s) 149
LpnPI CCDG 6 cut(s) 21, 26, 46, 53, 231, 255
Lsp1109I GCAGC 1 cut(s) 220
LweI GCATC 2 cut(s) 34, 178
MaeI CTAG 2 cut(s) 95, 213
MalI GATC 3 cut(s) 195, 201, 330
MboI GATC 3 cut(s) 193, 199, 328
MboII GAAGA 1 cut(s) 76
MhlI GDGCHC 3 cut(s) 54, 114, 249
MlsI TGGCCA 2 cut(s) 39, 296
MluNI TGGCCA 2 cut(s) 39, 296
MmeI TCCRAC 1 cut(s) 192
MnlI CCTC 4 cut(s) 34, 92, 110, 223
Mox20I TGGCCA 2 cut(s) 39, 296
MscI TGGCCA 2 cut(s) 39, 296
Msp20I TGGCCA 2 cut(s) 39, 296
MspR9I CCNGG 1 cut(s) 41
MvaI CCWGG 1 cut(s) 41
MvnI CGCG 1 cut(s) 119
MwoI GCNNNNNNNGC 1 cut(s) 180
NdeII GATC 3 cut(s) 193, 199, 328
NlaIII CATG 1 cut(s) 106
PceI AGGCCT 1 cut(s) 7
PfeI GAWTC 2 cut(s) 133, 239
PkrI GCNGC 2 cut(s) 31, 235
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
PstI CTGCAG 1 cut(s) 238
PstNI CAGNNNCTG 2 cut(s) 60, 242
SatI GCNGC 2 cut(s) 30, 234
Sau3AI GATC 3 cut(s) 193, 199, 328
ScrFI CCNGG 1 cut(s) 41
SduI GDGCHC 3 cut(s) 54, 114, 249
SetI ASST 3 cut(s) 26, 84, 176
SfaNI GCATC 2 cut(s) 34, 178
SfcI CTRYAG 1 cut(s) 234
SseBI AGGCCT 1 cut(s) 7
SsiI CCGC 2 cut(s) 29, 119
SspMI CTAG 2 cut(s) 95, 213
StuI AGGCCT 1 cut(s) 7
StyD4I CCNGG 1 cut(s) 39
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 2 cut(s) 133, 239
TscAI CASTG 3 cut(s) 132, 190, 225
TseI GCWGC 1 cut(s) 233
TspRI CASTG 3 cut(s) 132, 190, 225
XspI CTAG 2 cut(s) 95, 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.