Prupe.3G247500_v2.0.a1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23826886 .. 23829385
2500 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G247500.1

Sequence Viewer

Length: 1320 bp
ATGGATGGTGCTGGGGAATCTTCTGAATCTGGGTCTGCAGTATCAAGTCTGAAATCTATGGAAAATGGGTGTTCTGGTAAAGATGATGGGTGCCCAAAGCAAGTGTCGCCTCTTAGAGGTGGTGGGTCGAGGAATACGAGTCCTTTGGGTTGTGTAAGATCAAGAAACACTAGCCCTTCGAGGCAGAAGGTGGTTAAGACAAAACCGCGAGGGCTAGATGAGGAAACGGCTTCTACTTTTGGCAAAGCAATTCATCCTGATGTTCAAATGGAGGATAATATATGGGCAATGTTGCCAGAGGACTTGTTGAATGAGATATTAGCTAGGGTTCCACCATTTATGATATTTAGGCTCCGGTGTGTTTGTAAACGGTGGAATACAATTCTACAAGATAGAAGTTTTCTTAAGTTCCACTCGCAAGTGCCATCTCACGGGCCTTGTCTTCTCACATTCTGGAAGAACTCTCAGACCCCACAATGCTCAGTCTTCAGCTTACCATTAAAAACATGGTACAGAATTCCGTTCACATTTTTGCCACAGTGGGCATTCTGGTTGGTGGGCTCTTCTGCTGGTCTAGTTTGCTTTTCTGGGCTTGATGGCTTAAGTTTTAAAACCTTGGTTTGTAACCCTCTTACACAAACTTGGAGGACATTGCCAAGTATGCATTATAATCAGCAAAGGCAGCTGATAATGGTTGTTGATAAGAAGGACCGGTCATTTAAAATTATAGCCACTAGTGATATTTATGGTGACAACAAGTCGTTGCCCACTGAAGTATATGATTCAAAGCTAAATAGTTGGTCAATTCACCAGATAATGCCTGCAGTTAATCTTTGCTCCTCAAAGATGGCATATTGCGACTCCAGACTATATTTGGAAACTCTTTCTCCACTTGGCCTAATGATGTACCGGTTGGACACAGGATACTGGGAACACATTCCAGCTAAGTTCCCACGGTCTCTATTGGATGGTTATTTGGTAGCTGGCACCCAAAAGCGTCTGTTTCTAGTTGGAAGGATTGGTCTTTATAGTACTCTTCAGAGTATGAGAATATGGGAATTGGATCATACAAAATTTATATGGGTGGAGATTAGCAGGATGCCTCCAAAGTATTTTCGATCTTTGTTAAGGTTATCAGCTGAGAGATTCGAGTGCTCTGGACAGGATAACTTGATTTGCTTCACATCGTGGAACCAAGGGAAGGGCCTTCTCTATGACGTGGATAAGAAGGCGTGGTCCTGGATTGCAGGCTGTGCTCTTCAGTCGTACAACAGCCAGGTTTGTTTCTATGAGCCGAGATTTGATGCTTCCATCTACTGA

Protein Analysis

440

Amino Acids

49.97

Weight (kDa)

9.05

Isoelectric Point (pI)

52.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013199)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AccB1I GGYRCC 2 cut(s) 90, 986
AccII CGCG 1 cut(s) 208
AciI CCGC 1 cut(s) 206
AclWI GGATC 1 cut(s) 1071
AcsI RAATTY 2 cut(s) 516, 1073
AcuI CTGAAG 4 cut(s) 472, 792, 1022, 1244
AdeI CACNNNGTG 1 cut(s) 1188
AfaI GTAC 4 cut(s) 512, 908, 1033, 1268
AfiI CCNNNNNNNGG 3 cut(s) 116, 431, 1201
AflII CTTAAG 2 cut(s) 404, 601
AgeI ACCGGT 2 cut(s) 711, 909
AgsI TTSAA 3 cut(s) 266, 310, 786
AhdI GACNNNNNGTC 1 cut(s) 757
AhlI ACTAGT 1 cut(s) 734
AjiI CACGTC 1 cut(s) 1219
AjnI CCWGG 2 cut(s) 1238, 1275
AluBI AGCT 7 cut(s) 323, 492, 685, 790, 944, 983, 1139
AluI AGCT 7 cut(s) 323, 492, 685, 790, 944, 983, 1139
Alw21I GWGCWC 2 cut(s) 1157, 1258
Alw26I GTCTC 1 cut(s) 963
AlwI GGATC 1 cut(s) 1071
AoxI GGCC 3 cut(s) 434, 895, 1204
ApeKI GCWGC 1 cut(s) 682
ApoI RAATTY 2 cut(s) 516, 1073
ArsI GACNNNNNNTTYG 2 cut(s) 89, 121
AsiGI ACCGGT 2 cut(s) 711, 909
Asp700I GAANNNNTTC 1 cut(s) 936
AspS9I GGNCC 4 cut(s) 434, 709, 1204, 1236
AsuHPI GGTGA 2 cut(s) 761, 800
AvaII GGWCC 2 cut(s) 709, 1236
BaeGI GKGCMC 1 cut(s) 95
BanI GGYRCC 2 cut(s) 90, 986
BanII GRGCYC 1 cut(s) 563
BbsI GAAGAC 2 cut(s) 434, 478
Bbv12I GWGCWC 2 cut(s) 1157, 1258
BbvI GCAGC 1 cut(s) 694
BccI CCATC 6 cut(s) 80, 433, 590, 841, 962, 1319
BceAI ACGGC 1 cut(s) 243
BciT130I CCWGG 2 cut(s) 1240, 1277
BciVI GTATCC 1 cut(s) 917
BcoDI GTCTC 1 cut(s) 963
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 6 cut(s) 171, 215, 324, 575, 735, 1007
BfmI CTRYAG 2 cut(s) 36, 822
BfrI CTTAAG 2 cut(s) 404, 601
BfuI GTATCC 1 cut(s) 917
BisI GCNGC 1 cut(s) 683
BlsI GCNGC 1 cut(s) 684
BmcAI AGTACT 1 cut(s) 1033
Bme1390I CCNGG 2 cut(s) 1240, 1277
Bme18I GGWCC 2 cut(s) 709, 1236
BmeRI GACNNNNNGTC 1 cut(s) 757
BmgBI CACGTC 1 cut(s) 1219
BmgT120I GGNCC 4 cut(s) 434, 709, 1204, 1236
BmiI GGNNCC 5 cut(s) 92, 330, 353, 988, 1193
BmrFI CCNGG 2 cut(s) 1240, 1277
BmrI ACTGGG 1 cut(s) 937
BmsI GCATC 2 cut(s) 1089, 1294
BmuI ACTGGG 1 cut(s) 937
BpiI GAAGAC 2 cut(s) 434, 478
BpmI CTGGAG 1 cut(s) 847
BsaI GGTCTC 1 cut(s) 963
BsaJI CCNNGG 3 cut(s) 615, 953, 1195
BsaWI WCCGGW 3 cut(s) 354, 711, 909
BsaXI ACNNNNNCTCC 2 cut(s) 871, 901
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 431, 1201
Bse118I RCCGGY 2 cut(s) 711, 909
Bse1I ACTGG 1 cut(s) 932
Bse3DI GCAATG 2 cut(s) 294, 650
BseBI CCWGG 2 cut(s) 1240, 1277
BseDI CCNNGG 3 cut(s) 615, 953, 1195
BseGI GGATG 4 cut(s) 10, 253, 973, 1104
BseLI CCNNNNNNNGG 3 cut(s) 116, 431, 1201
BseMI GCAATG 2 cut(s) 294, 650
BseMII CTCAG 3 cut(s) 479, 495, 1131
BseNI ACTGG 1 cut(s) 932
BseRI GAGGAG 1 cut(s) 829
BseSI GKGCMC 1 cut(s) 95
BseXI GCAGC 1 cut(s) 694
BseYI CCCAGC 1 cut(s) 11
Bsh1236I CGCG 1 cut(s) 208
BshFI GGCC 3 cut(s) 436, 897, 1206
BshNI GGYRCC 2 cut(s) 90, 986
BshTI ACCGGT 2 cut(s) 711, 909
BsiHKAI GWGCWC 2 cut(s) 1157, 1258
BsiSI CCGG 3 cut(s) 355, 712, 910
BslI CCNNNNNNNGG 3 cut(s) 116, 431, 1201
BsmAI GTCTC 1 cut(s) 963
BsmI GAATGC 1 cut(s) 545
BsnI GGCC 3 cut(s) 436, 897, 1206
Bso31I GGTCTC 1 cut(s) 963
Bsp1286I GDGCHC 4 cut(s) 95, 563, 1157, 1258
Bsp143I GATC 3 cut(s) 158, 1063, 1118
BspACI CCGC 1 cut(s) 206
BspANI GGCC 3 cut(s) 436, 897, 1206
BspCNI CTCAG 3 cut(s) 478, 494, 1132
BspFNI CGCG 1 cut(s) 208
BspLI GGNNCC 5 cut(s) 92, 330, 353, 988, 1193
BspMAI CTGCAG 2 cut(s) 40, 826
BspPI GGATC 1 cut(s) 1071
BspQI GCTCTTC 2 cut(s) 568, 1263
BspT107I GGYRCC 2 cut(s) 90, 986
BspTI CTTAAG 2 cut(s) 404, 601
BspTNI GGTCTC 1 cut(s) 963
BsrDI GCAATG 2 cut(s) 294, 650
BsrFI RCCGGY 2 cut(s) 711, 909
BsrI ACTGG 1 cut(s) 932
BssAI RCCGGY 2 cut(s) 711, 909
BssECI CCNNGG 3 cut(s) 615, 953, 1195
BssMI GATC 3 cut(s) 158, 1063, 1118
BssT1I CCWWGG 2 cut(s) 615, 1195
Bst2UI CCWGG 2 cut(s) 1240, 1277
Bst4CI ACNGT 3 cut(s) 372, 540, 957
Bst6I CTCTTC 3 cut(s) 568, 1041, 1263
BstAFI CTTAAG 2 cut(s) 404, 601
BstAPI GCANNNNNTGC 1 cut(s) 1253
BstC8I GCNNGC 3 cut(s) 822, 985, 1249
BstDEI CTNAG 5 cut(s) 113, 465, 481, 945, 1140
BstDSI CCRYGG 1 cut(s) 953
BstENI CCTNNNNNAGG 1 cut(s) 114
BstF5I GGATG 4 cut(s) 10, 253, 973, 1104
BstFNI CGCG 1 cut(s) 208
BstKTI GATC 3 cut(s) 161, 1066, 1121
BstMAI GTCTC 1 cut(s) 963
BstMBI GATC 3 cut(s) 158, 1063, 1118
BstMWI GCNNNNNNNGC 4 cut(s) 106, 661, 682, 1253
BstNI CCWGG 2 cut(s) 1240, 1277
BstSCI CCNGG 2 cut(s) 1238, 1275
BstSFI CTRYAG 2 cut(s) 36, 822
BstSLI GKGCMC 1 cut(s) 95
BstUI CGCG 1 cut(s) 208
BstV1I GCAGC 1 cut(s) 694
BstV2I GAAGAC 2 cut(s) 434, 478
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 3 cut(s) 436, 897, 1206
BtgI CCRYGG 1 cut(s) 953
BtrI CACGTC 1 cut(s) 1219
BtsCI GGATG 4 cut(s) 10, 253, 973, 1104
BtsIMutI CAGTG 2 cut(s) 545, 768
Cac8I GCNNGC 3 cut(s) 822, 985, 1249
Cfr10I RCCGGY 2 cut(s) 711, 909
Cfr13I GGNCC 4 cut(s) 434, 709, 1204, 1236
CseI GACGC 1 cut(s) 986
Csp6I GTAC 4 cut(s) 511, 907, 1032, 1267
CspAI ACCGGT 2 cut(s) 711, 909
CviAII CATG 1 cut(s) 507
CviQI GTAC 4 cut(s) 511, 907, 1032, 1267
DdeI CTNAG 5 cut(s) 113, 465, 481, 945, 1140
DpnI GATC 3 cut(s) 160, 1065, 1120
DpnII GATC 3 cut(s) 158, 1063, 1118
DraI TTTAAA 2 cut(s) 610, 721
DraIII CACNNNGTG 1 cut(s) 1188
DriI GACNNNNNGTC 1 cut(s) 757
Eam1104I CTCTTC 3 cut(s) 568, 1041, 1263
Eam1105I GACNNNNNGTC 1 cut(s) 757
EarI CTCTTC 3 cut(s) 568, 1041, 1263
Eco130I CCWWGG 2 cut(s) 615, 1195
Eco24I GRGCYC 1 cut(s) 563
Eco31I GGTCTC 1 cut(s) 963
Eco47I GGWCC 2 cut(s) 709, 1236
Eco57I CTGAAG 4 cut(s) 472, 792, 1022, 1244
EcoNI CCTNNNNNAGG 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 1204
EcoRI GAATTC 1 cut(s) 516
EcoRII CCWGG 2 cut(s) 1238, 1275
EcoT14I CCWWGG 2 cut(s) 615, 1195
EcoT22I ATGCAT 1 cut(s) 666
EcoT38I GRGCYC 1 cut(s) 563
ErhI CCWWGG 2 cut(s) 615, 1195
FaeI CATG 1 cut(s) 510
FatI CATG 1 cut(s) 506
Fnu4HI GCNGC 1 cut(s) 683
FokI GGATG 4 cut(s) 17, 240, 980, 1111
FriOI GRGCYC 1 cut(s) 563
Fsp4HI GCNGC 1 cut(s) 683
FspBI CTAG 6 cut(s) 171, 215, 324, 575, 735, 1007
GluI GCNGC 1 cut(s) 683
GsaI CCCAGC 1 cut(s) 15
GsuI CTGGAG 1 cut(s) 847
HaeIII GGCC 3 cut(s) 436, 897, 1206
HapII CCGG 3 cut(s) 355, 712, 910
HgaI GACGC 1 cut(s) 986
Hin1II CATG 1 cut(s) 510
HinfI GANTC 6 cut(s) 17, 26, 139, 782, 860, 1146
HpaII CCGG 3 cut(s) 355, 712, 910
HphI GGTGA 2 cut(s) 761, 800
Hpy166II GTNNAC 2 cut(s) 368, 525
Hpy188I TCNGA 4 cut(s) 25, 51, 468, 1041
Hpy188III TCNNGA 5 cut(s) 162, 257, 454, 864, 1158
Hpy8I GTNNAC 2 cut(s) 368, 525
HpyAV CCTTC 7 cut(s) 181, 186, 700, 1008, 1195, 1217, 1222
HpyCH4III ACNGT 3 cut(s) 372, 540, 957
HpyCH4IV ACGT 1 cut(s) 1218
HpyCH4V TGCA 4 cut(s) 38, 664, 824, 1247
HpyF10VI GCNNNNNNNGC 4 cut(s) 106, 661, 682, 1253
HpyF3I CTNAG 5 cut(s) 113, 465, 481, 945, 1140
HpySE526I ACGT 1 cut(s) 1218
Hsp92II CATG 1 cut(s) 510
Kzo9I GATC 3 cut(s) 158, 1063, 1118
LguI GCTCTTC 2 cut(s) 568, 1263
LmnI GCTCC 2 cut(s) 357, 842
Lsp1109I GCAGC 1 cut(s) 694
LweI GCATC 2 cut(s) 1089, 1294
MaeI CTAG 6 cut(s) 171, 215, 324, 575, 735, 1007
MaeII ACGT 1 cut(s) 1218
MaeIII GTNAC 2 cut(s) 623, 749
MalI GATC 3 cut(s) 160, 1065, 1120
MboI GATC 3 cut(s) 158, 1063, 1118
MboII GAAGA 7 cut(s) 12, 434, 469, 478, 555, 1028, 1250
MhlI GDGCHC 4 cut(s) 95, 563, 1157, 1258
MluCI AATT 7 cut(s) 249, 381, 516, 723, 804, 1058, 1073
MlyI GAGTC 2 cut(s) 148, 854
MmeI TCCRAC 2 cut(s) 894, 991
Mph1103I ATGCAT 1 cut(s) 666
MroXI GAANNNNTTC 1 cut(s) 936
MseI TTAA 8 cut(s) 195, 405, 500, 602, 609, 720, 828, 1127
MslI CAYNNNNRTG 1 cut(s) 258
MspA1I CMGCKG 2 cut(s) 685, 1139
MspCI CTTAAG 2 cut(s) 404, 601
MspI CCGG 3 cut(s) 355, 712, 910
MspR9I CCNGG 2 cut(s) 1240, 1277
Mva1269I GAATGC 1 cut(s) 545
MvaI CCWGG 2 cut(s) 1240, 1277
MvnI CGCG 1 cut(s) 208
MwoI GCNNNNNNNGC 4 cut(s) 106, 661, 682, 1253
NdeII GATC 3 cut(s) 158, 1063, 1118
NlaIII CATG 1 cut(s) 510
NlaIV GGNNCC 5 cut(s) 92, 330, 353, 988, 1193
NmeAIII GCCGAG 1 cut(s) 1320
NmuCI GTSAC 1 cut(s) 749
NsiI ATGCAT 1 cut(s) 666
PciSI GCTCTTC 2 cut(s) 568, 1263
PcsI WCGNNNNNNNCGW 1 cut(s) 134
PctI GAATGC 1 cut(s) 545
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 4 cut(s) 17, 26, 782, 1146
PfoI TCCNGGA 1 cut(s) 1238
PinAI ACCGGT 2 cut(s) 711, 909
PkrI GCNGC 1 cut(s) 684
PleI GAGTC 2 cut(s) 147, 854
PpsI GAGTC 2 cut(s) 147, 854
PsiI TTATAA 1 cut(s) 669
Psp6I CCWGG 2 cut(s) 1238, 1275
PspFI CCCAGC 1 cut(s) 11
PspGI CCWGG 2 cut(s) 1238, 1275
PspN4I GGNNCC 5 cut(s) 92, 330, 353, 988, 1193
PspPI GGNCC 4 cut(s) 434, 709, 1204, 1236
PstI CTGCAG 2 cut(s) 40, 826
PvuII CAGCTG 2 cut(s) 685, 1139
RsaI GTAC 4 cut(s) 512, 908, 1033, 1268
RsaNI GTAC 4 cut(s) 511, 907, 1032, 1267
RseI CAYNNNNRTG 1 cut(s) 258
SapI GCTCTTC 2 cut(s) 568, 1263
SaqAI TTAA 8 cut(s) 195, 405, 500, 602, 609, 720, 828, 1127
SatI GCNGC 1 cut(s) 683
Sau3AI GATC 3 cut(s) 158, 1063, 1118
Sau96I GGNCC 4 cut(s) 434, 709, 1204, 1236
ScaI AGTACT 1 cut(s) 1033
SchI GAGTC 2 cut(s) 148, 854
ScrFI CCNGG 2 cut(s) 1240, 1277
SduI GDGCHC 4 cut(s) 95, 563, 1157, 1258
SfaNI GCATC 2 cut(s) 1089, 1294
SfcI CTRYAG 2 cut(s) 36, 822
SinI GGWCC 2 cut(s) 709, 1236
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 2 cut(s) 404, 601
SmoI CTYRAG 2 cut(s) 404, 601
SpeI ACTAGT 1 cut(s) 734
Sse9I AATT 7 cut(s) 249, 381, 516, 723, 804, 1058, 1073
SsiI CCGC 1 cut(s) 206
SspMI CTAG 6 cut(s) 171, 215, 324, 575, 735, 1007
StyD4I CCNGG 2 cut(s) 1238, 1275
StyI CCWWGG 2 cut(s) 615, 1195
TaaI ACNGT 3 cut(s) 372, 540, 957
TaiI ACGT 1 cut(s) 1221
TaqI TCGA 4 cut(s) 128, 179, 1117, 1149
TasI AATT 7 cut(s) 249, 381, 516, 723, 804, 1058, 1073
TatI WGTACW 1 cut(s) 1031
TfiI GAWTC 4 cut(s) 17, 26, 782, 1146
Tru1I TTAA 8 cut(s) 195, 405, 500, 602, 609, 720, 828, 1127
Tru9I TTAA 8 cut(s) 195, 405, 500, 602, 609, 720, 828, 1127
TscAI CASTG 2 cut(s) 545, 775
TseFI GTSAC 1 cut(s) 749
TseI GCWGC 1 cut(s) 682
Tsp45I GTSAC 1 cut(s) 749
TspDTI ATGAA 1 cut(s) 242
TspGWI ACGGA 1 cut(s) 510
TspRI CASTG 2 cut(s) 545, 775
Vha464I CTTAAG 2 cut(s) 404, 601
VpaK11BI GGWCC 2 cut(s) 709, 1236
XagI CCTNNNNNAGG 1 cut(s) 114
XapI RAATTY 2 cut(s) 516, 1073
XcmI CCANNNNNNNNNTGG 2 cut(s) 504, 871
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 6 cut(s) 171, 215, 324, 575, 735, 1007
ZrmI AGTACT 1 cut(s) 1033
Zsp2I ATGCAT 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.