Prupe.3G249900_v2.0.a1

Reversibly glycosylated polypeptide

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
23987829 .. 23990407
2579 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G249900.1

Sequence Viewer

Length: 1071 bp
ATGGCTTCTGCAACTCACCTTTTGACAGATGAGCTTGACATTGTCATCCCCACCATCAGAAACCTCGACTTCCTCGAGATGTGGAGGCCATTCCTTCAGCCCTACCACCTCATCATCGTCCAAGATGGTGACCCATCAAAGACCATCAAGGTCCCTGATGGCTTTGACTATGAGCTCTACAATCGTAACGACATTAACAGGATTCTGGGTCCTAGGTCGTCCTGCATTTCCTTCAAGGACTCTGCCTGCCGCTGCTTCGGCTACATGGTCTCCAAGAAGAAGTACATCTTCACTATTGACGATGACTGCTTCGTTGCACAAGACCCAGCTGGCAAACCCGTCAATGCACTAGAGCAGCACATCAAGAACCTTCTTTCACCATCCACCCCCTTTTTCTTCAACACTCTGTATGATCCTTACAGAGATGGCGCTGATTTCGTTCGTGGATACCCTTTCAGTCTCCGCGAGGGTGTCCCGACTGCTGTTTCTCATGGTCTGTGGCTAAACATCCCAGATTATGATGCACCTACACAGCTTGTGAAGCCTCTTGAGAGGAACACCAGGTTTGTGGATGCTGTTCTGACAATTCCAAAAGGCACCTTGTTCCCCATGTGTGGTATGAATTTGGGTTTCGACCGTGAACTCATTGGCCCTGCAATGTACTTCGGGCTCATGGGTGATGGTCAGCCAATTGGACGCTACGACGATATGTGGGCTGGCTGGTGCATCAAGGTGATATGTGACCACTTGGGACTGGGAGTGAAGACAGGCCTGCCTTATATCTATCACAGCAAAGCCAGCAACCCATTTGTGAACCTGAGGAAGGAGTACAAAGGCATCTTCTGGCAGGAAGAGATCATCCCATTCTTCCAAGCTGCGGTTCTTCCCAAAGACTGCACCACTGTTCAAGCTTGCTATGTTGAACTGTCCAAGCAGGTCAAGGAAAAGCTCGGCAAGGTGGATCCCTACTTCGACAAGCTCGCCGAAGCCATGGTCACATGGATTGAAGCTTGGGATGAGCTTAACCCAACTGGACCTGGTGCCAAACTGGCCAACGGCAAGGCTAAGTAA

Protein Analysis

357

Amino Acids

40.28

Weight (kDa)

5.75

Isoelectric Point (pI)

33.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02230 AT5G15650
fragaria_vesca FvH4_6g46510
malus_domestica MD09G1073400.v1.1 MD17G1064900.v1.1
prunus_persica Prupe.3G249900_v2.0.a1
pyrus_communis pycom17g06490
rosa_chinensis RchiOBHm_Chr2g0165161
rosa_laevigata RLG00000021513
rosa_multiflora Rmu_sc0001097.1_g000042
rosa_roxburghii Rroxscaffold_2G00085980
rosa_rugosa Rorug02G0512800
rosa_samantha Rh2AG581000 Rh2BG592300 Rh2CG563000 Rh2DG602300
rosa_wichuraiana Rw2G048250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 925
AccB1I GGYRCC 2 cut(s) 596, 1040
AccII CGCG 1 cut(s) 465
AciI CCGC 3 cut(s) 250, 463, 878
AclWI GGATC 3 cut(s) 407, 956, 969
AcoI YGGCCR 1 cut(s) 1050
AcsI RAATTY 1 cut(s) 622
AcuI CTGAAG 1 cut(s) 80
AfaI GTAC 3 cut(s) 284, 662, 830
AfiI CCNNNNNNNGG 3 cut(s) 614, 823, 877
AgsI TTSAA 5 cut(s) 235, 400, 908, 923, 1007
AjnI CCWGG 2 cut(s) 560, 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 864, 896
Alw21I GWGCWC 1 cut(s) 177
Alw26I GTCTC 2 cut(s) 274, 464
AlwI GGATC 3 cut(s) 407, 956, 969
Ama87I CYCGRG 1 cut(s) 74
AoxI GGCC 4 cut(s) 86, 649, 769, 1050
ApeKI GCWGC 3 cut(s) 252, 355, 875
ApoI RAATTY 1 cut(s) 622
ArsI GACNNNNNNTTYG 2 cut(s) 978, 1010
AspA2I CCTAGG 1 cut(s) 212
AspLEI GCGC 1 cut(s) 431
AspS9I GGNCC 4 cut(s) 151, 209, 650, 1034
AsuHPI GGTGA 5 cut(s) 8, 140, 369, 689, 745
AvaI CYCGRG 1 cut(s) 74
AvaII GGWCC 3 cut(s) 151, 209, 1034
AvrII CCTAGG 1 cut(s) 212
AxyI CCTNAGG 1 cut(s) 818
BalI TGGCCA 1 cut(s) 1052
BamHI GGATCC 1 cut(s) 961
BanI GGYRCC 2 cut(s) 596, 1040
BanII GRGCYC 2 cut(s) 177, 672
BbsI GAAGAC 1 cut(s) 770
Bbv12I GWGCWC 1 cut(s) 177
BbvI GCAGC 3 cut(s) 239, 367, 862
BccI CCATC 8 cut(s) 62, 119, 142, 152, 152, 388, 419, 674
BciT130I CCWGG 2 cut(s) 562, 1038
BciVI GTATCC 1 cut(s) 440
BcoDI GTCTC 2 cut(s) 274, 464
BfaI CTAG 2 cut(s) 213, 350
BfoI RGCGCY 1 cut(s) 432
BfuAI ACCTGC 1 cut(s) 925
BfuI GTATCC 1 cut(s) 440
BglI GCCNNNNNGGC 1 cut(s) 1049
BisI GCNGC 4 cut(s) 250, 253, 356, 876
BlnI CCTAGG 1 cut(s) 212
BlsI GCNGC 4 cut(s) 251, 254, 357, 877
Bme1390I CCNGG 2 cut(s) 562, 1038
Bme18I GGWCC 3 cut(s) 151, 209, 1034
BmeT110I CYCGRG 1 cut(s) 74
BmgT120I GGNCC 4 cut(s) 151, 209, 650, 1034
BmiI GGNNCC 5 cut(s) 153, 210, 598, 963, 1042
BmrFI CCNGG 2 cut(s) 562, 1038
BmrI ACTGGG 1 cut(s) 764
BmsI GCATC 4 cut(s) 511, 562, 735, 846
BmuI ACTGGG 1 cut(s) 764
BpiI GAAGAC 1 cut(s) 770
BpuEI CTTGAG 1 cut(s) 569
BsaI GGTCTC 1 cut(s) 274
BsaJI CCNNGG 2 cut(s) 212, 990
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 3 cut(s) 614, 823, 877
Bse1I ACTGG 3 cut(s) 759, 1036, 1053
Bse21I CCTNAGG 1 cut(s) 818
Bse3DI GCAATG 1 cut(s) 663
BseBI CCWGG 2 cut(s) 562, 1038
BseDI CCNNGG 2 cut(s) 212, 990
BseGI GGATG 6 cut(s) 45, 380, 507, 577, 858, 1021
BseLI CCNNNNNNNGG 3 cut(s) 614, 823, 877
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 1 cut(s) 809
BseNI ACTGG 3 cut(s) 759, 1036, 1053
BseXI GCAGC 3 cut(s) 239, 367, 862
BseYI CCCAGC 1 cut(s) 325
BsgI GTGCAG 1 cut(s) 880
Bsh1236I CGCG 1 cut(s) 465
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 4 cut(s) 88, 651, 771, 1052
BshNI GGYRCC 2 cut(s) 596, 1040
BsiEI CGRYCG 1 cut(s) 637
BsiHKAI GWGCWC 1 cut(s) 177
BsiHKCI CYCGRG 1 cut(s) 74
BslFI GGGAC 3 cut(s) 137, 458, 765
BslI CCNNNNNNNGG 3 cut(s) 614, 823, 877
BsmAI GTCTC 2 cut(s) 274, 464
BsmFI GGGAC 3 cut(s) 137, 458, 765
BsnI GGCC 4 cut(s) 88, 651, 771, 1052
Bso31I GGTCTC 1 cut(s) 274
BsoBI CYCGRG 1 cut(s) 74
Bsp1286I GDGCHC 2 cut(s) 177, 672
Bsp143I GATC 3 cut(s) 412, 855, 961
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 3 cut(s) 250, 463, 878
BspANI GGCC 4 cut(s) 88, 651, 771, 1052
BspCNI CTCAG 1 cut(s) 810
BspFNI CGCG 1 cut(s) 465
BspLI GGNNCC 5 cut(s) 153, 210, 598, 963, 1042
BspMI ACCTGC 1 cut(s) 925
BspPI GGATC 3 cut(s) 407, 956, 969
BspT107I GGYRCC 2 cut(s) 596, 1040
BspTNI GGTCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 663
BsrI ACTGG 3 cut(s) 759, 1036, 1053
BssECI CCNNGG 2 cut(s) 212, 990
BssMI GATC 3 cut(s) 412, 855, 961
BssT1I CCWWGG 2 cut(s) 212, 990
Bst2UI CCWGG 2 cut(s) 562, 1038
Bst4CI ACNGT 3 cut(s) 638, 904, 927
Bst6I CTCTTC 1 cut(s) 846
BstC8I GCNNGC 7 cut(s) 247, 331, 718, 773, 799, 913, 981
BstDEI CTNAG 2 cut(s) 818, 1065
BstDSI CCRYGG 1 cut(s) 990
BstEII GGTNACC 1 cut(s) 128
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 6 cut(s) 45, 380, 507, 577, 858, 1021
BstFNI CGCG 1 cut(s) 465
BstH2I RGCGCY 1 cut(s) 432
BstHHI GCGC 1 cut(s) 431
BstKTI GATC 3 cut(s) 415, 858, 964
BstMAI GTCTC 2 cut(s) 274, 464
BstMBI GATC 3 cut(s) 412, 855, 961
BstMCI CGRYCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 4 cut(s) 258, 541, 798, 1049
BstNI CCWGG 2 cut(s) 562, 1038
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 2 cut(s) 560, 1036
BstUI CGCG 1 cut(s) 465
BstV1I GCAGC 3 cut(s) 239, 367, 862
BstV2I GAAGAC 1 cut(s) 770
BstX2I RGATCY 1 cut(s) 961
BstXI CCANNNNNNTGG 1 cut(s) 568
BstYI RGATCY 1 cut(s) 961
Bsu36I CCTNAGG 1 cut(s) 818
BsuI GTATCC 1 cut(s) 440
BsuRI GGCC 4 cut(s) 88, 651, 771, 1052
BtgI CCRYGG 1 cut(s) 990
BtsCI GGATG 6 cut(s) 45, 380, 507, 577, 858, 1021
BtsIMutI CAGTG 1 cut(s) 900
BveI ACCTGC 1 cut(s) 925
Cac8I GCNNGC 7 cut(s) 247, 331, 718, 773, 799, 913, 981
CfoI GCGC 1 cut(s) 431
Cfr13I GGNCC 4 cut(s) 151, 209, 650, 1034
CseI GACGC 1 cut(s) 705
CsiI ACCWGGT 2 cut(s) 560, 1036
Csp6I GTAC 3 cut(s) 283, 661, 829
CviAII CATG 6 cut(s) 265, 491, 610, 673, 991, 999
CviQI GTAC 3 cut(s) 283, 661, 829
DdeI CTNAG 2 cut(s) 818, 1065
DpnI GATC 3 cut(s) 414, 857, 963
DpnII GATC 3 cut(s) 412, 855, 961
EaeI YGGCCR 1 cut(s) 1050
Eam1104I CTCTTC 1 cut(s) 846
EarI CTCTTC 1 cut(s) 846
Ecl136II GAGCTC 1 cut(s) 175
Eco130I CCWWGG 2 cut(s) 212, 990
Eco147I AGGCCT 1 cut(s) 771
Eco24I GRGCYC 2 cut(s) 177, 672
Eco31I GGTCTC 1 cut(s) 274
Eco47I GGWCC 3 cut(s) 151, 209, 1034
Eco53kI GAGCTC 1 cut(s) 175
Eco57I CTGAAG 1 cut(s) 80
Eco81I CCTNAGG 1 cut(s) 818
Eco88I CYCGRG 1 cut(s) 74
Eco91I GGTNACC 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 175
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoO109I RGGNCCY 2 cut(s) 151, 209
EcoO65I GGTNACC 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 560, 1036
EcoT14I CCWWGG 2 cut(s) 212, 990
EcoT38I GRGCYC 2 cut(s) 177, 672
ErhI CCWWGG 2 cut(s) 212, 990
FaeI CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
FalI AAGNNNNNCTT 2 cut(s) 272, 304
FaqI GGGAC 3 cut(s) 137, 458, 765
FatI CATG 6 cut(s) 264, 490, 609, 672, 990, 998
Fnu4HI GCNGC 4 cut(s) 250, 253, 356, 876
FokI GGATG 6 cut(s) 32, 367, 494, 584, 845, 1028
FriOI GRGCYC 2 cut(s) 177, 672
Fsp4HI GCNGC 4 cut(s) 250, 253, 356, 876
FspBI CTAG 2 cut(s) 213, 350
GlaI GCGC 1 cut(s) 430
GluI GCNGC 4 cut(s) 250, 253, 356, 876
GsaI CCCAGC 1 cut(s) 329
HaeII RGCGCY 1 cut(s) 432
HaeIII GGCC 4 cut(s) 88, 651, 771, 1052
HgaI GACGC 1 cut(s) 705
HhaI GCGC 1 cut(s) 431
Hin1II CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
Hin6I GCGC 1 cut(s) 429
HinP1I GCGC 1 cut(s) 429
HindIII AAGCTT 2 cut(s) 909, 1008
HinfI GANTC 2 cut(s) 202, 239
HphI GGTGA 5 cut(s) 8, 140, 369, 689, 745
Hpy166II GTNNAC 2 cut(s) 641, 814
Hpy188I TCNGA 2 cut(s) 59, 582
Hpy188III TCNNGA 4 cut(s) 76, 364, 475, 548
Hpy8I GTNNAC 2 cut(s) 641, 814
Hpy99I CGWCG 1 cut(s) 707
HpyAV CCTTC 4 cut(s) 104, 241, 380, 817
HpyCH4III ACNGT 3 cut(s) 638, 904, 927
HpyCH4V TGCA 8 cut(s) 11, 225, 317, 347, 524, 656, 726, 897
HpyF10VI GCNNNNNNNGC 4 cut(s) 258, 541, 798, 1049
HpyF3I CTNAG 2 cut(s) 818, 1065
Hsp92II CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
HspAI GCGC 1 cut(s) 429
Kzo9I GATC 3 cut(s) 412, 855, 961
Lsp1109I GCAGC 3 cut(s) 239, 367, 862
LweI GCATC 4 cut(s) 511, 562, 735, 846
MabI ACCWGGT 2 cut(s) 560, 1036
MaeI CTAG 2 cut(s) 213, 350
MaeIII GTNAC 4 cut(s) 128, 185, 740, 994
MalI GATC 3 cut(s) 414, 857, 963
MboI GATC 3 cut(s) 412, 855, 961
MboII GAAGA 8 cut(s) 280, 289, 388, 775, 832, 859, 863, 875
MfeI CAATTG 1 cut(s) 690
MflI RGATCY 1 cut(s) 961
MhlI GDGCHC 2 cut(s) 177, 672
MlsI TGGCCA 1 cut(s) 1052
MluCI AATT 3 cut(s) 585, 622, 690
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 233
MnlI CCTC 8 cut(s) 74, 78, 83, 119, 460, 546, 555, 813
Mox20I TGGCCA 1 cut(s) 1052
MscI TGGCCA 1 cut(s) 1052
MseI TTAA 2 cut(s) 195, 1023
MslI CAYNNNNRTG 1 cut(s) 731
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 2 cut(s) 252, 329
MspR9I CCNGG 2 cut(s) 562, 1038
MunI CAATTG 1 cut(s) 690
MvaI CCWGG 2 cut(s) 562, 1038
MvnI CGCG 1 cut(s) 465
MwoI GCNNNNNNNGC 4 cut(s) 258, 541, 798, 1049
NcoI CCATGG 1 cut(s) 990
NdeII GATC 3 cut(s) 412, 855, 961
NlaIII CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
NlaIV GGNNCC 5 cut(s) 153, 210, 598, 963, 1042
NmeAIII GCCGAG 1 cut(s) 930
NmuCI GTSAC 3 cut(s) 128, 740, 994
PaeR7I CTCGAG 1 cut(s) 74
PceI AGGCCT 1 cut(s) 771
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PfeI GAWTC 1 cut(s) 202
PflFI GACNNNGTC 1 cut(s) 41
PkrI GCNGC 4 cut(s) 251, 254, 357, 877
PleI GAGTC 1 cut(s) 233
PpsI GAGTC 1 cut(s) 233
PpuMI RGGWCCY 2 cut(s) 151, 209
Psp124BI GAGCTC 1 cut(s) 177
Psp5II RGGWCCY 2 cut(s) 151, 209
Psp6I CCWGG 2 cut(s) 560, 1036
PspEI GGTNACC 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 325
PspGI CCWGG 2 cut(s) 560, 1036
PspN4I GGNNCC 5 cut(s) 153, 210, 598, 963, 1042
PspPI GGNCC 4 cut(s) 151, 209, 650, 1034
PspPPI RGGWCCY 2 cut(s) 151, 209
PsuI RGATCY 1 cut(s) 961
PsyI GACNNNGTC 1 cut(s) 41
PvuII CAGCTG 1 cut(s) 329
RsaI GTAC 3 cut(s) 284, 662, 830
RsaNI GTAC 3 cut(s) 283, 661, 829
RseI CAYNNNNRTG 1 cut(s) 731
SacI GAGCTC 1 cut(s) 177
SaqAI TTAA 2 cut(s) 195, 1023
SatI GCNGC 4 cut(s) 250, 253, 356, 876
Sau3AI GATC 3 cut(s) 412, 855, 961
Sau96I GGNCC 4 cut(s) 151, 209, 650, 1034
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 2 cut(s) 562, 1038
SduI GDGCHC 2 cut(s) 177, 672
SexAI ACCWGGT 2 cut(s) 560, 1036
SfaNI GCATC 4 cut(s) 511, 562, 735, 846
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 3 cut(s) 151, 209, 1034
SlaI CTCGAG 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 731
SmlI CTYRAG 2 cut(s) 74, 548
SmoI CTYRAG 2 cut(s) 74, 548
Sse9I AATT 3 cut(s) 585, 622, 690
SseBI AGGCCT 1 cut(s) 771
SsiI CCGC 3 cut(s) 250, 463, 878
SspMI CTAG 2 cut(s) 213, 350
SstI GAGCTC 1 cut(s) 177
StuI AGGCCT 1 cut(s) 771
StyD4I CCNGG 2 cut(s) 560, 1036
StyI CCWWGG 2 cut(s) 212, 990
TaaI ACNGT 3 cut(s) 638, 904, 927
TaqI TCGA 4 cut(s) 66, 75, 633, 972
TasI AATT 3 cut(s) 585, 622, 690
TatI WGTACW 3 cut(s) 282, 660, 828
TauI GCSGC 1 cut(s) 252
TfiI GAWTC 1 cut(s) 202
Tru1I TTAA 2 cut(s) 195, 1023
Tru9I TTAA 2 cut(s) 195, 1023
TscAI CASTG 1 cut(s) 907
TseFI GTSAC 3 cut(s) 128, 740, 994
TseI GCWGC 3 cut(s) 252, 355, 875
Tsp45I GTSAC 3 cut(s) 128, 740, 994
TspDTI ATGAA 1 cut(s) 635
TspRI CASTG 1 cut(s) 907
Tth111I GACNNNGTC 1 cut(s) 41
VpaK11BI GGWCC 3 cut(s) 151, 209, 1034
XagI CCTNNNNNAGG 1 cut(s) 821
XapI RAATTY 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 74
XmaJI CCTAGG 1 cut(s) 212
XspI CTAG 2 cut(s) 213, 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.