pycom17g06490

Reversibly glycosylated polypeptide

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
4671593 .. 4674122
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06490.2

Sequence Viewer

Length: 1068 bp
ATGGCTTCCGCGACACCCCTTTTGACGGATGAGCTCGACATTGTGATCCCCACCATCAGAAACCTCGACTTCCTGGAGATGTGGAGGCCGTTCTTGCAGCCCTATCACCTCATCATCGTCCAGGACGGTGATCCGTCGAAGACCATCAAAGTCCCGGACGGCTACGACTACGAGCTCTATAACCGCAACGACATTAACAAGATTCTGGGTCCGAGGTCGTCCTGCATTTCGTTCAAGGACTCTGCCTGCCGATGCTTCGGATACATGGTCTCCAAGAAGAAGTACATATTCACCATCGACGATGACTGCTTTGTTGCAACAGACCCATCTGGCAAACCAATCAATGCACTGGAGCAACACATCAAGAACCTCCTTGCACCATCGACCCCATTTTTCTTCAACACGCTGTATGAACCCTTCAGAGACGGTGCGGATTTTGTTCGTGGATACCCTTTCAGTCTCCGTGAGGGTGTTCCGACCGCTGTCTCTCACGGTCTCTGGCTCAATATCCCGGATTATGATGCACCAACACAGCTTGTGAAGCCACTTGAGAGAAACACAAGGTTTGTGGATGCTGTTCTGACAATCCCAAAGGGCACATTATTCCCAATGTGTGGGATGAACTTGGCTTTCGACCGTGACCTCATCGGCCCTGCTATGTACTTCGGACTAATGGGTGACGGTCAGCCAATTGGACGCTACGACGATATGTGGGCTGGCTGGTGCACCAAGGTGATAACAGATCATTTGGGGCTTGGAGTGAAGACAGGGCTGCCATATATCTACCACAGCAAAGCCAGCAACCCATTTGTGAACCTGAGGAAGGAGTACAAAGGCATCTTCTGGCAGGAAGAGATCATCCCATTCTTCCAATCTGCTGTCCTTCCCAAAGACTGCACCACCGTGCAAGCATGCTACATTGAGCTCTCCAAGCAGGTCAAGGAGAAGCTCAGCAAGGTGGATCCCTACTTCGACAAGCTCGCCGACGCCATGGTAACATGGATTGAAGCTTGGGATGAGCTCAACCCTAATGGACCTGGATCCAAAGTGGCCAACGGCAAGGCGTAG

Protein Analysis

356

Amino Acids

40.13

Weight (kDa)

5.48

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013849)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02230 AT5G15650
fragaria_vesca FvH4_6g46510
malus_domestica MD09G1073400.v1.1 MD17G1064900.v1.1
prunus_persica Prupe.3G249900_v2.0.a1
pyrus_communis pycom17g06490
rosa_chinensis RchiOBHm_Chr2g0165161
rosa_laevigata RLG00000021513
rosa_multiflora Rmu_sc0001097.1_g000042
rosa_roxburghii Rroxscaffold_2G00085980
rosa_rugosa Rorug02G0512800
rosa_samantha Rh2AG581000 Rh2BG592300 Rh2CG563000 Rh2DG602300
rosa_wichuraiana Rw2G048250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 925
AccB7I CCANNNNNTGG 1 cut(s) 614
AccII CGCG 1 cut(s) 11
AciI CCGC 4 cut(s) 9, 184, 431, 480
AclWI GGATC 6 cut(s) 40, 125, 956, 969, 1035, 1048
AcoI YGGCCR 1 cut(s) 1050
AcuI CTGAAG 1 cut(s) 403
AcyI GRCGYC 1 cut(s) 987
AfaI GTAC 3 cut(s) 284, 662, 830
AfiI CCNNNNNNNGG 3 cut(s) 25, 614, 823
AgsI TTSAA 3 cut(s) 235, 400, 1007
AjnI CCWGG 3 cut(s) 72, 120, 1036
AleI CACNNNNGTG 2 cut(s) 731, 902
AluBI AGCT 8 cut(s) 34, 175, 535, 925, 949, 979, 1010, 1021
AluI AGCT 8 cut(s) 34, 175, 535, 925, 949, 979, 1010, 1021
Alw21I GWGCWC 5 cut(s) 36, 177, 728, 927, 1023
Alw26I GTCTC 5 cut(s) 274, 417, 464, 490, 500
Alw44I GTGCAC 1 cut(s) 724
AlwI GGATC 6 cut(s) 40, 125, 956, 969, 1035, 1048
AoxI GGCC 3 cut(s) 86, 649, 1050
ApaLI GTGCAC 1 cut(s) 724
ApeKI GCWGC 2 cut(s) 97, 772
ArsI GACNNNNNNTTYG 1 cut(s) 36
AspS9I GGNCC 3 cut(s) 209, 650, 1034
AsuC2I CCSGG 2 cut(s) 155, 512
AsuHPI GGTGA 5 cut(s) 98, 140, 283, 689, 745
AvaII GGWCC 2 cut(s) 209, 1034
AxyI CCTNAGG 1 cut(s) 818
BaeGI GKGCMC 2 cut(s) 599, 728
BalI TGGCCA 1 cut(s) 1052
BamHI GGATCC 2 cut(s) 961, 1040
BanII GRGCYC 4 cut(s) 36, 177, 927, 1023
BarI GAAGNNNNNNTAC 2 cut(s) 401, 433
BbsI GAAGAC 2 cut(s) 146, 770
Bbv12I GWGCWC 5 cut(s) 36, 177, 728, 927, 1023
BbvI GCAGC 2 cut(s) 109, 759
BccI CCATC 5 cut(s) 62, 152, 302, 334, 388
BceAI ACGGC 2 cut(s) 73, 175
BciT130I CCWGG 3 cut(s) 74, 122, 1038
BciVI GTATCC 2 cut(s) 254, 440
BcnI CCSGG 2 cut(s) 155, 512
BcoDI GTCTC 5 cut(s) 274, 417, 464, 490, 500
BfuAI ACCTGC 1 cut(s) 925
BfuI GTATCC 2 cut(s) 254, 440
BisI GCNGC 2 cut(s) 98, 773
BlpI GCTNAGC 1 cut(s) 950
BlsI GCNGC 2 cut(s) 99, 774
Bme1390I CCNGG 5 cut(s) 74, 122, 155, 512, 1038
Bme18I GGWCC 2 cut(s) 209, 1034
BmgT120I GGNCC 3 cut(s) 209, 650, 1034
BmiI GGNNCC 3 cut(s) 210, 963, 1042
BmrFI CCNGG 5 cut(s) 74, 122, 155, 512, 1038
BmsI GCATC 4 cut(s) 242, 511, 562, 846
BoxI GACNNNNGTC 1 cut(s) 482
BpiI GAAGAC 2 cut(s) 146, 770
BpmI CTGGAG 2 cut(s) 95, 371
Bpu1102I GCTNAGC 1 cut(s) 950
BpuEI CTTGAG 1 cut(s) 569
BpuMI CCSGG 2 cut(s) 155, 512
BsaHI GRCGYC 1 cut(s) 987
BsaI GGTCTC 2 cut(s) 274, 500
BsaJI CCNNGG 3 cut(s) 212, 729, 990
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 614, 823
Bse1I ACTGG 1 cut(s) 354
Bse21I CCTNAGG 1 cut(s) 818
BseBI CCWGG 3 cut(s) 74, 122, 1038
BseDI CCNNGG 3 cut(s) 212, 729, 990
BseGI GGATG 5 cut(s) 34, 577, 624, 858, 1021
BseLI CCNNNNNNNGG 3 cut(s) 25, 614, 823
BseMII CTCAG 2 cut(s) 809, 964
BseNI ACTGG 1 cut(s) 354
BseSI GKGCMC 2 cut(s) 599, 728
BseXI GCAGC 2 cut(s) 109, 759
BsgI GTGCAG 1 cut(s) 880
Bsh1236I CGCG 1 cut(s) 11
Bsh1285I CGRYCG 2 cut(s) 480, 637
BshFI GGCC 3 cut(s) 88, 651, 1052
BsiEI CGRYCG 2 cut(s) 480, 637
BsiHKAI GWGCWC 5 cut(s) 36, 177, 728, 927, 1023
BsiSI CCGG 2 cut(s) 155, 512
BslFI GGGAC 1 cut(s) 137
BslI CCNNNNNNNGG 3 cut(s) 25, 614, 823
BsmAI GTCTC 5 cut(s) 274, 417, 464, 490, 500
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 1 cut(s) 137
BsnI GGCC 3 cut(s) 88, 651, 1052
Bso31I GGTCTC 2 cut(s) 274, 500
Bsp1286I GDGCHC 6 cut(s) 36, 177, 599, 728, 927, 1023
Bsp143I GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
Bsp1720I GCTNAGC 1 cut(s) 950
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 4 cut(s) 9, 184, 431, 480
BspANI GGCC 3 cut(s) 88, 651, 1052
BspCNI CTCAG 2 cut(s) 810, 963
BspFNI CGCG 1 cut(s) 11
BspLI GGNNCC 3 cut(s) 210, 963, 1042
BspMI ACCTGC 1 cut(s) 925
BspPI GGATC 6 cut(s) 40, 125, 956, 969, 1035, 1048
BspTNI GGTCTC 2 cut(s) 274, 500
BsrI ACTGG 1 cut(s) 354
BssECI CCNNGG 3 cut(s) 212, 729, 990
BssMI GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
BssNI GRCGYC 1 cut(s) 987
BssT1I CCWWGG 2 cut(s) 729, 990
Bst2UI CCWGG 3 cut(s) 74, 122, 1038
Bst4CI ACNGT 6 cut(s) 128, 428, 494, 638, 683, 904
Bst6I CTCTTC 1 cut(s) 846
BstACI GRCGYC 1 cut(s) 987
BstC8I GCNNGC 6 cut(s) 247, 718, 799, 909, 913, 981
BstDEI CTNAG 2 cut(s) 818, 950
BstDSI CCRYGG 1 cut(s) 990
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 5 cut(s) 34, 577, 624, 858, 1021
BstFNI CGCG 1 cut(s) 11
BstKTI GATC 6 cut(s) 48, 133, 745, 858, 964, 1043
BstMAI GTCTC 5 cut(s) 274, 417, 464, 490, 500
BstMBI GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
BstMCI CGRYCG 2 cut(s) 480, 637
BstMWI GCNNNNNNNGC 4 cut(s) 94, 541, 798, 931
BstNI CCWGG 3 cut(s) 74, 122, 1038
BstNSI RCATGY 1 cut(s) 915
BstPAI GACNNNNGTC 1 cut(s) 482
BstSCI CCNGG 5 cut(s) 72, 120, 153, 510, 1036
BstSLI GKGCMC 2 cut(s) 599, 728
BstUI CGCG 1 cut(s) 11
BstV1I GCAGC 2 cut(s) 109, 759
BstV2I GAAGAC 2 cut(s) 146, 770
BstX2I RGATCY 2 cut(s) 961, 1040
BstYI RGATCY 2 cut(s) 961, 1040
Bsu36I CCTNAGG 1 cut(s) 818
BsuI GTATCC 2 cut(s) 254, 440
BsuRI GGCC 3 cut(s) 88, 651, 1052
BtgI CCRYGG 1 cut(s) 990
BtsCI GGATG 5 cut(s) 34, 577, 624, 858, 1021
BtsIMutI CAGTG 1 cut(s) 347
BveI ACCTGC 1 cut(s) 925
Cac8I GCNNGC 6 cut(s) 247, 718, 799, 909, 913, 981
Cfr13I GGNCC 3 cut(s) 209, 650, 1034
CseI GACGC 2 cut(s) 705, 995
Csp6I GTAC 3 cut(s) 283, 661, 829
CspCI CAANNNNNGTGG 2 cut(s) 549, 584
CviAII CATG 4 cut(s) 265, 912, 991, 999
CviQI GTAC 3 cut(s) 283, 661, 829
DdeI CTNAG 2 cut(s) 818, 950
DpnI GATC 6 cut(s) 47, 132, 744, 857, 963, 1042
DpnII GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
EaeI YGGCCR 1 cut(s) 1050
Eam1104I CTCTTC 1 cut(s) 846
EarI CTCTTC 1 cut(s) 846
Ecl136II GAGCTC 4 cut(s) 34, 175, 925, 1021
Eco130I CCWWGG 2 cut(s) 729, 990
Eco24I GRGCYC 4 cut(s) 36, 177, 927, 1023
Eco31I GGTCTC 2 cut(s) 274, 500
Eco47I GGWCC 2 cut(s) 209, 1034
Eco53kI GAGCTC 4 cut(s) 34, 175, 925, 1021
Eco57I CTGAAG 1 cut(s) 403
Eco81I CCTNAGG 1 cut(s) 818
EcoICRI GAGCTC 4 cut(s) 34, 175, 925, 1021
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoRII CCWGG 3 cut(s) 72, 120, 1036
EcoT14I CCWWGG 2 cut(s) 729, 990
EcoT38I GRGCYC 4 cut(s) 36, 177, 927, 1023
ErhI CCWWGG 2 cut(s) 729, 990
Esp3I CGTCTC 1 cut(s) 417
FaeI CATG 4 cut(s) 268, 915, 994, 1002
FaqI GGGAC 1 cut(s) 137
FatI CATG 4 cut(s) 264, 911, 990, 998
Fnu4HI GCNGC 2 cut(s) 98, 773
FokI GGATG 5 cut(s) 41, 584, 631, 845, 1028
FriOI GRGCYC 4 cut(s) 36, 177, 927, 1023
Fsp4HI GCNGC 2 cut(s) 98, 773
GluI GCNGC 2 cut(s) 98, 773
GsuI CTGGAG 2 cut(s) 95, 371
HaeIII GGCC 3 cut(s) 88, 651, 1052
HapII CCGG 2 cut(s) 155, 512
HgaI GACGC 2 cut(s) 705, 995
Hin1I GRCGYC 1 cut(s) 987
Hin1II CATG 4 cut(s) 268, 915, 994, 1002
HindIII AAGCTT 1 cut(s) 1008
HinfI GANTC 2 cut(s) 202, 239
HpaII CCGG 2 cut(s) 155, 512
HphI GGTGA 5 cut(s) 98, 140, 283, 689, 745
Hpy166II GTNNAC 2 cut(s) 726, 814
Hpy188I TCNGA 7 cut(s) 59, 213, 260, 422, 477, 582, 668
Hpy188III TCNNGA 1 cut(s) 364
Hpy8I GTNNAC 2 cut(s) 726, 814
Hpy99I CGWCG 4 cut(s) 139, 302, 707, 989
HpyAV CCTTC 3 cut(s) 427, 817, 893
HpyCH4III ACNGT 6 cut(s) 128, 428, 494, 638, 683, 904
HpyCH4V TGCA 9 cut(s) 97, 225, 317, 347, 377, 524, 726, 897, 907
HpyF10VI GCNNNNNNNGC 4 cut(s) 94, 541, 798, 931
HpyF3I CTNAG 2 cut(s) 818, 950
Hsp92I GRCGYC 1 cut(s) 987
Hsp92II CATG 4 cut(s) 268, 915, 994, 1002
Kzo9I GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
LmnI GCTCC 1 cut(s) 352
Lsp1109I GCAGC 2 cut(s) 109, 759
LweI GCATC 4 cut(s) 242, 511, 562, 846
MaeIII GTNAC 3 cut(s) 638, 677, 994
MalI GATC 6 cut(s) 47, 132, 744, 857, 963, 1042
MboI GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
MboII GAAGA 7 cut(s) 151, 289, 388, 775, 832, 859, 863
MfeI CAATTG 1 cut(s) 690
MflI RGATCY 2 cut(s) 961, 1040
MhlI GDGCHC 6 cut(s) 36, 177, 599, 728, 927, 1023
MlsI TGGCCA 1 cut(s) 1052
MluCI AATT 1 cut(s) 690
MluNI TGGCCA 1 cut(s) 1052
MlyI GAGTC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 500
MnlI CCTC 8 cut(s) 74, 78, 119, 207, 380, 460, 653, 813
Mox20I TGGCCA 1 cut(s) 1052
MscI TGGCCA 1 cut(s) 1052
MseI TTAA 1 cut(s) 195
MslI CAYNNNNRTG 2 cut(s) 731, 902
Msp20I TGGCCA 1 cut(s) 1052
MspA1I CMGCKG 1 cut(s) 482
MspI CCGG 2 cut(s) 155, 512
MspR9I CCNGG 5 cut(s) 74, 122, 155, 512, 1038
MunI CAATTG 1 cut(s) 690
MvaI CCWGG 3 cut(s) 74, 122, 1038
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 4 cut(s) 94, 541, 798, 931
NciI CCSGG 2 cut(s) 155, 512
NcoI CCATGG 1 cut(s) 990
NdeII GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
NlaIII CATG 4 cut(s) 268, 915, 994, 1002
NlaIV GGNNCC 3 cut(s) 210, 963, 1042
NmuCI GTSAC 2 cut(s) 638, 677
NspI RCATGY 1 cut(s) 915
OliI CACNNNNGTG 2 cut(s) 731, 902
PaeI GCATGC 1 cut(s) 915
PfeI GAWTC 1 cut(s) 202
PflMI CCANNNNNTGG 1 cut(s) 614
PfoI TCCNGGA 4 cut(s) 72, 120, 153, 510
PkrI GCNGC 2 cut(s) 99, 774
PleI GAGTC 1 cut(s) 233
PpsI GAGTC 1 cut(s) 233
PshAI GACNNNNGTC 1 cut(s) 482
Psp124BI GAGCTC 4 cut(s) 36, 177, 927, 1023
Psp6I CCWGG 3 cut(s) 72, 120, 1036
PspGI CCWGG 3 cut(s) 72, 120, 1036
PspN4I GGNNCC 3 cut(s) 210, 963, 1042
PspPI GGNCC 3 cut(s) 209, 650, 1034
PsuI RGATCY 2 cut(s) 961, 1040
RsaI GTAC 3 cut(s) 284, 662, 830
RsaNI GTAC 3 cut(s) 283, 661, 829
RseI CAYNNNNRTG 2 cut(s) 731, 902
SacI GAGCTC 4 cut(s) 36, 177, 927, 1023
SaqAI TTAA 1 cut(s) 195
SatI GCNGC 2 cut(s) 98, 773
Sau3AI GATC 6 cut(s) 45, 130, 742, 855, 961, 1040
Sau96I GGNCC 3 cut(s) 209, 650, 1034
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 5 cut(s) 74, 122, 155, 512, 1038
SduI GDGCHC 6 cut(s) 36, 177, 599, 728, 927, 1023
SfaNI GCATC 4 cut(s) 242, 511, 562, 846
SinI GGWCC 2 cut(s) 209, 1034
SmiMI CAYNNNNRTG 2 cut(s) 731, 902
SmlI CTYRAG 1 cut(s) 548
SmoI CTYRAG 1 cut(s) 548
SphI GCATGC 1 cut(s) 915
Sse9I AATT 1 cut(s) 690
SsiI CCGC 4 cut(s) 9, 184, 431, 480
SstI GAGCTC 4 cut(s) 36, 177, 927, 1023
StyD4I CCNGG 5 cut(s) 72, 120, 153, 510, 1036
StyI CCWWGG 2 cut(s) 729, 990
TaaI ACNGT 6 cut(s) 128, 428, 494, 638, 683, 904
TaqI TCGA 7 cut(s) 36, 66, 137, 297, 383, 633, 972
TasI AATT 1 cut(s) 690
TatI WGTACW 3 cut(s) 282, 660, 828
TfiI GAWTC 1 cut(s) 202
Tru1I TTAA 1 cut(s) 195
Tru9I TTAA 1 cut(s) 195
TscAI CASTG 1 cut(s) 354
TseFI GTSAC 2 cut(s) 638, 677
TseI GCWGC 2 cut(s) 97, 772
Tsp45I GTSAC 2 cut(s) 638, 677
TspDTI ATGAA 2 cut(s) 426, 635
TspGWI ACGGA 3 cut(s) 41, 123, 452
TspRI CASTG 1 cut(s) 354
Van91I CCANNNNNTGG 1 cut(s) 614
VneI GTGCAC 1 cut(s) 724
VpaK11BI GGWCC 2 cut(s) 209, 1034
XagI CCTNNNNNAGG 1 cut(s) 821
XceI RCATGY 1 cut(s) 915
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.