Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0013703

Physical Location & Seq

Genomic Coordinates Forward (+)

24343357 .. 24352339

Gene Structure 8983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G254500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCCTTGCAGACAGCAATTCCTCCACCGACTCCTAGTGCCCAACTTGTTGGAAATGCTTTCATTGAGCAGTATTACCATATTCTTCACAATAACCCGGGCCTGGTCCATAGATTTTATCAGGATTCAAGTGTTCTAAGCCGGCCTGATTCCAATGGTGTGATGACATCAGTGACCACTATGCAAGGAATCAATGAGAAGATCCTTTCCTTAAATTACAACGAATATAAAGCTGAAATAAAGACCGCTGATGCTCAGAAGTCTTATAAGGATGGGGTAACTGTGTTAGTTACTGGATGTTTAACGAGCAAGGATAACTTGAAAAGGAAATTCGCCCAATCATTTTTTCTTGCCCCTCAAGACAATGGGTTCTTTGTATTGAACGATGTCTTTAGGTTTGTAGAAGATGGAGAACTGTTTGAAAACCATTCAGTTAATGGAGTTAATGATGCCACAACAGTCCTTTCAAACCAAGATCCTGAGCCAAATCATGTTCCTGATCCTCCTGCACCCGATCTGGAAACTACTCAAGTTGAAGAGAATCAAATTGGTATTGAGAAAGCTTATGACACATCAGACCATGAGAGACAATCAGCTAACGAGAAGGAGTCTGATGCTGAACCCCCATCTTATTCAAATGGGAACGATGTCTCTGTGGCAGTCGAGCCAACGTCTACTACAGCCCAAGAGGATGCTCCAAAAAAGTCATATGCATCAATTGTAAAAGTTCCCAAAGGGAGTCCAGGACCAAATAAGGTTTATGTGCCTACTAATACTATAAGAGTGGCTCCTAAGAAAGTGGAGAATAATTTGCCTGCATCGGCTCCACCTGCTTCTGTGCCTGAAGCATCAGCGCCAACTAGCACTAGTACCCCAGAGAGTAATGATACTAATGAGGAAGTTGAGGGTTATTCTGTTTACATAAGGAATTTGCCCTTAAATGTGACGGCTGATCAGCTTGAGGAAGAATTCAAGAAATTTGGACCAATAAAGCAAGGAGGTATCCAAGTTCGAAATAAGAAGCTGCAGGGATACTGTTTTGGATTTGTTGAATTTCTGTCAGCAAGTTCCATGAATAGTGCCATTCAGGCTTCACCCATCAGTTTTGGTGGCCGTCAAGCTGTCATCGAGATAAAGAGAACGACCACTCGAGTTGGTAGCAGTGGAAGAGGTAGGTTTCCTCCTCCTGGAAGGGGAGGGTTTCGGAGTGACAGCTTTAGAGGCCGTGGTAATTATGTTGGTGGCCGGAGCTTTGGAAGAAACGAATATGGGAACAGGGGTGAATTCTCAAGCCGAGGCAGGGGTCCAGCTGGGCGTGGTGGAGATGGTTATCAGCAAGGGAGAGGGAGAGGCGGCCGTCCAATGGAAGAGTGGAGGAAGAGGAAGGAGTTGCAGAGCTTGAGGAGAATGGAGGCGAAGAGAAAGAGGTCGGAGAAGCAGCAGAGGAATTTGAAGGTGCCCAGAGATCGGAGCAGAGAGAACTTTGAGGAAGATAAGAGAGGAGGAGAAGCCATGAATGGGGTTCAAAGTTATAGACAAGAGCAGTTTGTGAAGGTGGTGGATGAGTTTAGAGCTATGGGGATCCCCACTTGGGTATCTGGTGATAAGGGTAATTGTCCGGTTCCTCCACCGCCAGCATCTCAGAGCACAATTGGGTCTCAAGGAAGTGGCTCATCTGGGATTTCAGAATCTGAGAGCCATGCTGCTGCTGCTCAAGGAGCGCACAAATGCACTGAACCAAGAAGTCATGCCAATGCTCAGTCTTCTCCAAAGACTAATAAGGAACTGTTAGTGACCCCTCGAATGATAACCACCGAAAGATCAGGTCAGTTCAACGGAGTTCAAATGGAAATTAACTGTGATAAACCCACAGTTCCAGAAAAAGGAGCCAACGAAATTGTGAGGAATGTGTTGGAAAATATGCCTTGTGTGTCTACAAAAGGAGATGGCCCCAACGGGAAAAGAATAGAAGGGTTTCTTTATAGGTACAAGAAGGGTGAGGAAGTGAGGATAGTATGTGTTTGTCATGGTAGCTTTCTCTCTCCCGCCGAGTTTGTGAAGCATGCCGGCGGTGGTGACGTGGCACACCCTTTGAAGCATATAGTAGTCAATCCATCTCCGTTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

710

Amino Acids

77.47

Weight (kDa)

8.64

Isoelectric Point (pI)

51.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013703)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46800 FvH4_6g46800
malus_domestica	MD09G1067300.v1.1 MD17G1060400.v1.1
prunus_persica	Prupe.3G254500_v2.0.a1
pyrus_communis	pycom17g06010
rosa_chinensis	RchiOBHm_Chr2g0165791
rosa_laevigata	RLG00000021554
rosa_multiflora	Rmu_sc0003227.1_g000012
rosa_roxburghii	Rroxscaffold_2G00085520
rosa_rugosa	Rorug02G0517400 Rorug02G0517500 Rorug02G0517600
rosa_samantha	Rh2AG583100 Rh2BG595200 Rh2CG565800 Rh2DG605000
rosa_wichuraiana	Rw2G048640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	267
AarI	CACCTGC	1 cut(s)	838
Acc36I	ACCTGC	1 cut(s)	838
AccB1I	GGYRCC	1 cut(s)	1456
AccI	GTMKAC	2 cut(s)	674, 1934
AciI	CCGC	5 cut(s)	246, 1353, 1631, 2046, 2070
AclWI	GGATC	5 cut(s)	196, 470, 494, 1576, 1589
AcoI	YGGCCR	3 cut(s)	1111, 1243, 1354
AcsI	RAATTY	7 cut(s)	329, 928, 968, 977, 1052, 1283, 1447
AcuI	CTGAAG	1 cut(s)	864
AfaI	GTAC	2 cut(s)	871, 1988
AfiI	CCNNNNNNNGG	9 cut(s)	103, 1187, 1193, 1300, 1363, 1467, 1518, 1591, 1883
AhlI	ACTAGT	1 cut(s)	866
AjiI	CACGTC	1 cut(s)	2080
AjnI	CCWGG	3 cut(s)	102, 742, 1186
AjuI	GAANNNNNNNTTGG	2 cut(s)	330, 362
Alw21I	GWGCWC	1 cut(s)	1649
Alw26I	GTCTC	3 cut(s)	580, 655, 1662
AlwI	GGATC	5 cut(s)	196, 470, 494, 1576, 1589
AlwNI	CAGNNNCTG	1 cut(s)	1691
Ama87I	CYCGRG	2 cut(s)	97, 1149
AoxI	GGCC	8 cut(s)	3, 100, 143, 1111, 1222, 1243, 1354, 1948
ApeKI	GCWGC	5 cut(s)	1024, 1438, 1703, 1706, 1709
ApoI	RAATTY	7 cut(s)	329, 928, 968, 977, 1052, 1283, 1447
Asp700I	GAANNNNTTC	1 cut(s)	1974
AspLEI	GCGC	2 cut(s)	856, 1723
AspS9I	GGNCC	6 cut(s)	100, 106, 746, 983, 1304, 1949
AsuC2I	CCSGG	2 cut(s)	98, 99
AsuHPI	GGTGA	5 cut(s)	1086, 1292, 1613, 2009, 2087
AsuII	TTCGAA	1 cut(s)	1012
AvaI	CYCGRG	2 cut(s)	97, 1149
AvaII	GGWCC	4 cut(s)	106, 746, 983, 1304
BaeGI	GKGCMC	2 cut(s)	43, 1461
BaeI	ACNNNNGTAYC	2 cut(s)	1578, 1611
BamHI	GGATCC	1 cut(s)	1581
BanI	GGYRCC	1 cut(s)	1456
BbsI	GAAGAC	1 cut(s)	1755
Bbv12I	GWGCWC	1 cut(s)	1649
BbvI	GCAGC	5 cut(s)	1011, 1450, 1690, 1693, 1696
BccI	CCATC	7 cut(s)	266, 401, 634, 1106, 1319, 1940, 2122
BceAI	ACGGC	4 cut(s)	963, 1098, 1209, 1341
BciT130I	CCWGG	3 cut(s)	104, 744, 1188
BciVI	GTATCC	2 cut(s)	1013, 1025
BclI	TGATCA	1 cut(s)	952
BcnI	CCSGG	2 cut(s)	98, 99
BcoDI	GTCTC	3 cut(s)	580, 655, 1662
BcuI	ACTAGT	1 cut(s)	866
BfaI	CTAG	3 cut(s)	36, 861, 867
BfmI	CTRYAG	2 cut(s)	678, 1025
BfoI	RGCGCY	1 cut(s)	857
BfuAI	ACCTGC	1 cut(s)	838
BfuI	GTATCC	2 cut(s)	1013, 1025
BglI	GCCNNNNNGGC	1 cut(s)	1088
BisI	GCNGC	6 cut(s)	1025, 1354, 1439, 1704, 1707, 1710
BlsI	GCNGC	6 cut(s)	1026, 1355, 1440, 1705, 1708, 1711
Bme1390I	CCNGG	5 cut(s)	98, 99, 104, 744, 1188
Bme18I	GGWCC	4 cut(s)	106, 746, 983, 1304
BmeT110I	CYCGRG	2 cut(s)	97, 1149
BmgBI	CACGTC	1 cut(s)	2080
BmgT120I	GGNCC	6 cut(s)	100, 106, 746, 983, 1304, 1949
BmiI	GGNNCC	8 cut(s)	789, 825, 1305, 1458, 1583, 1623, 1888, 1951
BmrFI	CCNGG	5 cut(s)	98, 99, 104, 744, 1188
BmsI	GCATC	8 cut(s)	241, 439, 604, 682, 722, 827, 857, 1646
BpiI	GAAGAC	1 cut(s)	1755
Bpu10I	CCTNAGC	1 cut(s)	480
Bpu14I	TTCGAA	1 cut(s)	1012
BpuEI	CTTGAG	7 cut(s)	342, 513, 980, 1273, 1420, 1644, 1698
BpuMI	CCSGG	2 cut(s)	98, 99
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaI	GGTCTC	1 cut(s)	1662
BsaJI	CCNNGG	3 cut(s)	97, 1225, 1294
BsaWI	WCCGGW	1 cut(s)	1618
Bsc4I	CCNNNNNNNGG	9 cut(s)	103, 1187, 1193, 1300, 1363, 1467, 1518, 1591, 1883
Bse118I	RCCGGY	2 cut(s)	141, 2066
Bse1I	ACTGG	1 cut(s)	298
Bse8I	GATNNNNATC	1 cut(s)	1329
BseBI	CCWGG	3 cut(s)	104, 744, 1188
BseDI	CCNNGG	3 cut(s)	97, 1225, 1294
BseGI	GGATG	4 cut(s)	277, 302, 697, 1567
BseJI	GATNNNNATC	1 cut(s)	1329
BseLI	CCNNNNNNNGG	9 cut(s)	103, 1187, 1193, 1300, 1363, 1467, 1518, 1591, 1883
BseMII	CTCAG	5 cut(s)	269, 471, 1655, 1683, 1772
BseNI	ACTGG	1 cut(s)	298
BseRI	GAGGAG	4 cut(s)	1173, 1417, 1515, 1518
BseSI	GKGCMC	2 cut(s)	43, 1461
BseX3I	CGGCCG	1 cut(s)	1354
BseXI	GCAGC	5 cut(s)	1011, 1450, 1690, 1693, 1696
BseYI	CCCAGC	1 cut(s)	1310
BsgI	GTGCAG	1 cut(s)	492
Bsh1285I	CGRYCG	1 cut(s)	1357
BshFI	GGCC	8 cut(s)	5, 102, 145, 1113, 1224, 1245, 1356, 1950
BshNI	GGYRCC	1 cut(s)	1456
BsiEI	CGRYCG	1 cut(s)	1357
BsiHKAI	GWGCWC	1 cut(s)	1649
BsiHKCI	CYCGRG	2 cut(s)	97, 1149
BsiSI	CCGG	5 cut(s)	98, 142, 1246, 1619, 2067
BslI	CCNNNNNNNGG	9 cut(s)	103, 1187, 1193, 1300, 1363, 1467, 1518, 1591, 1883
BsmAI	GTCTC	3 cut(s)	580, 655, 1662
BsnI	GGCC	8 cut(s)	5, 102, 145, 1113, 1224, 1245, 1356, 1950
Bso31I	GGTCTC	1 cut(s)	1662
BsoBI	CYCGRG	2 cut(s)	97, 1149
Bsp119I	TTCGAA	1 cut(s)	1012
Bsp1286I	GDGCHC	3 cut(s)	43, 1461, 1649
Bsp143I	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
BspACI	CCGC	5 cut(s)	246, 1353, 1631, 2046, 2070
BspANI	GGCC	8 cut(s)	5, 102, 145, 1113, 1224, 1245, 1356, 1950
BspCNI	CTCAG	5 cut(s)	268, 472, 1654, 1684, 1771
BspLI	GGNNCC	8 cut(s)	789, 825, 1305, 1458, 1583, 1623, 1888, 1951
BspMAI	CTGCAG	1 cut(s)	1029
BspMI	ACCTGC	1 cut(s)	838
BspPI	GGATC	5 cut(s)	196, 470, 494, 1576, 1589
BspT104I	TTCGAA	1 cut(s)	1012
BspT107I	GGYRCC	1 cut(s)	1456
BspTNI	GGTCTC	1 cut(s)	1662
BsrFI	RCCGGY	2 cut(s)	141, 2066
BsrI	ACTGG	1 cut(s)	298
BssAI	RCCGGY	2 cut(s)	141, 2066
BssECI	CCNNGG	3 cut(s)	97, 1225, 1294
BssMI	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
Bst2UI	CCWGG	3 cut(s)	104, 744, 1188
Bst4CI	ACNGT	7 cut(s)	283, 417, 460, 1037, 1788, 1859, 1873
Bst6I	CTCTTC	5 cut(s)	531, 1162, 1362, 1373, 1412
BstBI	TTCGAA	1 cut(s)	1012
BstC8I	GCNNGC	5 cut(s)	143, 816, 1635, 2064, 2068
BstDEI	CTNAG	7 cut(s)	137, 255, 480, 792, 1641, 1692, 1758
BstDSI	CCRYGG	1 cut(s)	1225
BstF5I	GGATG	4 cut(s)	277, 302, 697, 1567
BstH2I	RGCGCY	1 cut(s)	857
BstHHI	GCGC	2 cut(s)	856, 1723
BstKTI	GATC	8 cut(s)	204, 478, 502, 517, 955, 1468, 1584, 1823
BstMAI	GTCTC	3 cut(s)	580, 655, 1662
BstMBI	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
BstMCI	CGRYCG	1 cut(s)	1357
BstMWI	GCNNNNNNNGC	5 cut(s)	830, 1088, 1221, 1709, 1718
BstNI	CCWGG	3 cut(s)	104, 744, 1188
BstNSI	RCATGY	1 cut(s)	2066
BstSCI	CCNGG	5 cut(s)	96, 97, 102, 742, 1186
BstSFI	CTRYAG	2 cut(s)	678, 1025
BstSLI	GKGCMC	2 cut(s)	43, 1461
BstV1I	GCAGC	5 cut(s)	1011, 1450, 1690, 1693, 1696
BstV2I	GAAGAC	1 cut(s)	1755
BstX2I	RGATCY	3 cut(s)	201, 475, 1581
BstXI	CCANNNNNNTGG	1 cut(s)	50
BstYI	RGATCY	3 cut(s)	201, 475, 1581
BstZI	CGGCCG	1 cut(s)	1354
BsuI	GTATCC	2 cut(s)	1013, 1025
BsuRI	GGCC	8 cut(s)	5, 102, 145, 1113, 1224, 1245, 1356, 1950
BtgI	CCRYGG	1 cut(s)	1225
BtrI	CACGTC	1 cut(s)	2080
BtsCI	GGATG	4 cut(s)	277, 302, 697, 1567
BtsI	GCAGTG	1 cut(s)	1168
BtsIMutI	CAGTG	3 cut(s)	177, 1168, 1731
BveI	ACCTGC	1 cut(s)	838
Cac8I	GCNNGC	5 cut(s)	143, 816, 1635, 2064, 2068
CaiI	CAGNNNCTG	1 cut(s)	1691
CfoI	GCGC	2 cut(s)	856, 1723
Cfr10I	RCCGGY	2 cut(s)	141, 2066
Cfr13I	GGNCC	6 cut(s)	100, 106, 746, 983, 1304, 1949
Cfr9I	CCCGGG	1 cut(s)	97
Csp6I	GTAC	2 cut(s)	870, 1987
CspCI	CAANNNNNGTGG	2 cut(s)	1135, 1170
CviAII	CATG	8 cut(s)	491, 581, 1072, 1513, 1700, 1748, 2027, 2063
CviQI	GTAC	2 cut(s)	870, 1987
DdeI	CTNAG	7 cut(s)	137, 255, 480, 792, 1641, 1692, 1758
DpnI	GATC	8 cut(s)	203, 477, 501, 516, 954, 1467, 1583, 1822
DpnII	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
EaeI	YGGCCR	3 cut(s)	1111, 1243, 1354
EagI	CGGCCG	1 cut(s)	1354
Eam1104I	CTCTTC	5 cut(s)	531, 1162, 1362, 1373, 1412
EarI	CTCTTC	5 cut(s)	531, 1162, 1362, 1373, 1412
EclXI	CGGCCG	1 cut(s)	1354
Eco31I	GGTCTC	1 cut(s)	1662
Eco47I	GGWCC	4 cut(s)	106, 746, 983, 1304
Eco52I	CGGCCG	1 cut(s)	1354
Eco57I	CTGAAG	1 cut(s)	864
Eco88I	CYCGRG	2 cut(s)	97, 1149
EcoRI	GAATTC	2 cut(s)	968, 1283
EcoRII	CCWGG	3 cut(s)	102, 742, 1186
EcoT22I	ATGCAT	1 cut(s)	715
FaeI	CATG	8 cut(s)	494, 584, 1075, 1516, 1703, 1751, 2030, 2066
FalI	AAGNNNNNCTT	4 cut(s)	302, 334, 1962, 1994
FatI	CATG	8 cut(s)	490, 580, 1071, 1512, 1699, 1747, 2026, 2062
FauI	CCCGC	1 cut(s)	2053
FauNDI	CATATG	1 cut(s)	709
FbaI	TGATCA	1 cut(s)	952
FblI	GTMKAC	2 cut(s)	674, 1934
Fnu4HI	GCNGC	6 cut(s)	1025, 1354, 1439, 1704, 1707, 1710
FokI	GGATG	4 cut(s)	284, 309, 704, 1574
Fsp4HI	GCNGC	6 cut(s)	1025, 1354, 1439, 1704, 1707, 1710
FspBI	CTAG	3 cut(s)	36, 861, 867
GlaI	GCGC	2 cut(s)	855, 1722
GluI	GCNGC	6 cut(s)	1025, 1354, 1439, 1704, 1707, 1710
GsaI	CCCAGC	1 cut(s)	1314
HaeII	RGCGCY	1 cut(s)	857
HaeIII	GGCC	8 cut(s)	5, 102, 145, 1113, 1224, 1245, 1356, 1950
HapII	CCGG	5 cut(s)	98, 142, 1246, 1619, 2067
HhaI	GCGC	2 cut(s)	856, 1723
Hin1II	CATG	8 cut(s)	494, 584, 1075, 1516, 1703, 1751, 2030, 2066
Hin6I	GCGC	2 cut(s)	854, 1721
HinP1I	GCGC	2 cut(s)	854, 1721
HindIII	AAGCTT	1 cut(s)	561
HinfI	GANTC	8 cut(s)	31, 125, 149, 189, 541, 608, 739, 1688
HpaII	CCGG	5 cut(s)	98, 142, 1246, 1619, 2067
HphI	GGTGA	5 cut(s)	1086, 1292, 1613, 2009, 2087
Hpy166II	GTNNAC	3 cut(s)	675, 919, 1935
Hpy188I	TCNGA	9 cut(s)	258, 577, 613, 1206, 1432, 1470, 1644, 1687, 1693
Hpy188III	TCNNGA	8 cut(s)	122, 359, 479, 497, 518, 973, 1129, 1877
Hpy8I	GTNNAC	3 cut(s)	675, 919, 1935
HpyAV	CCTTC	7 cut(s)	598, 1185, 1378, 1447, 1546, 1964, 1987
HpyCH4III	ACNGT	7 cut(s)	283, 417, 460, 1037, 1788, 1859, 1873
HpyCH4IV	ACGT	2 cut(s)	671, 2079
HpyCH4V	TGCA	8 cut(s)	10, 184, 509, 713, 818, 1027, 1393, 1731
HpyF10VI	GCNNNNNNNGC	5 cut(s)	830, 1088, 1221, 1709, 1718
HpyF3I	CTNAG	7 cut(s)	137, 255, 480, 792, 1641, 1692, 1758
HpySE526I	ACGT	2 cut(s)	671, 2079
Hsp92II	CATG	8 cut(s)	494, 584, 1075, 1516, 1703, 1751, 2030, 2066
HspAI	GCGC	2 cut(s)	854, 1721
KroI	GCCGGC	2 cut(s)	141, 2066
KroNI	GCCGGC	2 cut(s)	143, 2068
Ksp22I	TGATCA	1 cut(s)	952
Kzo9I	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
LmnI	GCTCC	7 cut(s)	700, 793, 829, 1248, 1470, 1718, 1886
Lsp1109I	GCAGC	5 cut(s)	1011, 1450, 1690, 1693, 1696
LweI	GCATC	8 cut(s)	241, 439, 604, 682, 722, 827, 857, 1646
MaeI	CTAG	3 cut(s)	36, 861, 867
MaeII	ACGT	2 cut(s)	671, 2079
MaeIII	GTNAC	7 cut(s)	172, 277, 289, 943, 1208, 1792, 2075
MalI	GATC	8 cut(s)	203, 477, 501, 516, 954, 1467, 1583, 1822
MboI	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
MfeI	CAATTG	2 cut(s)	717, 1650
MflI	RGATCY	3 cut(s)	201, 475, 1581
MhlI	GDGCHC	3 cut(s)	43, 1461, 1649
MlyI	GAGTC	3 cut(s)	25, 617, 748
MmeI	TCCRAC	3 cut(s)	31, 1410, 1893
Mph1103I	ATGCAT	1 cut(s)	715
MroNI	GCCGGC	2 cut(s)	141, 2066
MroXI	GAANNNNTTC	1 cut(s)	1974
MseI	TTAA	6 cut(s)	212, 302, 435, 444, 938, 1854
MslI	CAYNNNNRTG	1 cut(s)	1752
MspA1I	CMGCKG	2 cut(s)	248, 1310
MspI	CCGG	5 cut(s)	98, 142, 1246, 1619, 2067
MspR9I	CCNGG	5 cut(s)	98, 99, 104, 744, 1188
MunI	CAATTG	2 cut(s)	717, 1650
MvaI	CCWGG	3 cut(s)	104, 744, 1188
MwoI	GCNNNNNNNGC	5 cut(s)	830, 1088, 1221, 1709, 1718
NaeI	GCCGGC	2 cut(s)	143, 2068
NciI	CCSGG	2 cut(s)	98, 99
NdeI	CATATG	1 cut(s)	709
NdeII	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
NgoMIV	GCCGGC	2 cut(s)	141, 2066
NlaIII	CATG	8 cut(s)	494, 584, 1075, 1516, 1703, 1751, 2030, 2066
NlaIV	GGNNCC	8 cut(s)	789, 825, 1305, 1458, 1583, 1623, 1888, 1951
NmeAIII	GCCGAG	2 cut(s)	1319, 2074
NmuCI	GTSAC	5 cut(s)	172, 943, 1208, 1792, 2075
NsiI	ATGCAT	1 cut(s)	715
NspI	RCATGY	1 cut(s)	2066
NspV	TTCGAA	1 cut(s)	1012
PaeI	GCATGC	1 cut(s)	2066
PaeR7I	CTCGAG	1 cut(s)	1149
PaqCI	CACCTGC	1 cut(s)	838
PdiI	GCCGGC	2 cut(s)	143, 2068
PdmI	GAANNNNTTC	1 cut(s)	1974
PfeI	GAWTC	5 cut(s)	125, 149, 189, 541, 1688
PfoI	TCCNGGA	2 cut(s)	742, 1186
PkrI	GCNGC	6 cut(s)	1026, 1355, 1440, 1705, 1708, 1711
PleI	GAGTC	3 cut(s)	25, 616, 747
PpsI	GAGTC	3 cut(s)	25, 616, 747
PsiI	TTATAA	1 cut(s)	267
Psp6I	CCWGG	3 cut(s)	102, 742, 1186
PspFI	CCCAGC	1 cut(s)	1310
PspGI	CCWGG	3 cut(s)	102, 742, 1186
PspN4I	GGNNCC	8 cut(s)	789, 825, 1305, 1458, 1583, 1623, 1888, 1951
PspPI	GGNCC	6 cut(s)	100, 106, 746, 983, 1304, 1949
PspXI	VCTCGAGB	1 cut(s)	1149
PstI	CTGCAG	1 cut(s)	1029
PstNI	CAGNNNCTG	1 cut(s)	1691
PsuI	RGATCY	3 cut(s)	201, 475, 1581
PvuII	CAGCTG	1 cut(s)	1310
RsaI	GTAC	2 cut(s)	871, 1988
RsaNI	GTAC	2 cut(s)	870, 1987
RseI	CAYNNNNRTG	1 cut(s)	1752
SaqAI	TTAA	6 cut(s)	212, 302, 435, 444, 938, 1854
SatI	GCNGC	6 cut(s)	1025, 1354, 1439, 1704, 1707, 1710
Sau3AI	GATC	8 cut(s)	201, 475, 499, 514, 952, 1465, 1581, 1820
Sau96I	GGNCC	6 cut(s)	100, 106, 746, 983, 1304, 1949
SchI	GAGTC	3 cut(s)	25, 617, 748
ScrFI	CCNGG	5 cut(s)	98, 99, 104, 744, 1188
SduI	GDGCHC	3 cut(s)	43, 1461, 1649
SfaNI	GCATC	8 cut(s)	241, 439, 604, 682, 722, 827, 857, 1646
SfcI	CTRYAG	2 cut(s)	678, 1025
Sfr274I	CTCGAG	1 cut(s)	1149
SfuI	TTCGAA	1 cut(s)	1012
SinI	GGWCC	4 cut(s)	106, 746, 983, 1304
SlaI	CTCGAG	1 cut(s)	1149
SmaI	CCCGGG	1 cut(s)	99
SmiMI	CAYNNNNRTG	1 cut(s)	1752
SmlI	CTYRAG	8 cut(s)	357, 528, 959, 1149, 1288, 1399, 1659, 1713
SmoI	CTYRAG	8 cut(s)	357, 528, 959, 1149, 1288, 1399, 1659, 1713
SpeI	ACTAGT	1 cut(s)	866
SphI	GCATGC	1 cut(s)	2066
SsiI	CCGC	5 cut(s)	246, 1353, 1631, 2046, 2070
SspMI	CTAG	3 cut(s)	36, 861, 867
StyD4I	CCNGG	5 cut(s)	96, 97, 102, 742, 1186
TaaI	ACNGT	7 cut(s)	283, 417, 460, 1037, 1788, 1859, 1873
TaiI	ACGT	2 cut(s)	674, 2082
TaqI	TCGA	5 cut(s)	663, 1012, 1128, 1150, 1801
TauI	GCSGC	1 cut(s)	1356
TfiI	GAWTC	5 cut(s)	125, 149, 189, 541, 1688
Tru1I	TTAA	6 cut(s)	212, 302, 435, 444, 938, 1854
Tru9I	TTAA	6 cut(s)	212, 302, 435, 444, 938, 1854
TscAI	CASTG	3 cut(s)	177, 1168, 1738
TseFI	GTSAC	5 cut(s)	172, 943, 1208, 1792, 2075
TseI	GCWGC	5 cut(s)	1024, 1438, 1703, 1706, 1709
Tsp45I	GTSAC	5 cut(s)	172, 943, 1208, 1792, 2075
TspDTI	ATGAA	3 cut(s)	52, 1088, 1529
TspGWI	ACGGA	2 cut(s)	1851, 2109
TspMI	CCCGGG	1 cut(s)	97
TspRI	CASTG	3 cut(s)	177, 1168, 1738
VpaK11BI	GGWCC	4 cut(s)	106, 746, 983, 1304
XapI	RAATTY	7 cut(s)	329, 928, 968, 977, 1052, 1283, 1447
XceI	RCATGY	1 cut(s)	2066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	434, 1368
XhoI	CTCGAG	1 cut(s)	1149
XmaI	CCCGGG	1 cut(s)	97
XmiI	GTMKAC	2 cut(s)	674, 1934
XmnI	GAANNNNTTC	1 cut(s)	1974
XspI	CTAG	3 cut(s)	36, 861, 867
Zsp2I	ATGCAT	1 cut(s)	715

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.