Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0013703

Physical Location & Seq

Genomic Coordinates Reverse (-)

64841715 .. 64847572

Gene Structure 5858 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0517600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGATGGTAGCTGGTGCCGAAAATGCAGGTGGGGACGCAGATTTGCCCCCACCCCCTCCAACCATACCATCCAATTTGAAGCCAGGACTAGTGGCTCCGCCCAAGTATTCTATTATGACTAGGCCATGCAGGACTGGAACTACTGGACGGCGCATAACTTTGCTTGCAAACCACTTCAAAGTTTCAGTGAATAATCCAGATGCTGTATTTTACCAGTATTCTGTTCACATGACTTATGAAGATAATAAGCCAGTTCTTCCGGGCATTGGAATTGGGAGAAAATTGATGGATAGGCTTTATCAAACATACTCCGTGGAATTTGATGGCAAAAAGTTTGCATATGATGGGGAGAAAGCTCTGTACACAGTTGGCCCTCTTCCGCTGCACAAGCTCAATTACACAGTTGTGCTAGAGGAATCAGTTTCTAGGCCACATGAAACCGGGAGCTCTAGTGTCACTGAAAAACGGATGAAACAATCTATTCAGTCAAAGACTTTCAATGTAGAGATAAGTTATGCTGCCAAAATACCTCTGAAGCCAATTGCTCTTGCCCTTGAAGGAGCTGATGCAGATGATGGTCAAGATGCATTGAGAGTGCTCGACATAGTCTTAAGGCAGCAAGCAGCTAACAGGGGATGTCTTCTAGTAAGACAGTCATTCTTTCACGATGACTCCAGATGCATCACTGACGTTCGAGGTACCGGTTTAAGTACTGTTCGGGGCTTCCATTCCAGTTTTCGTCCCACTCAGGGCGGCCTCACCTTGAATATGGATGTATCTACTACACTGATCCTAAAACCTGGACCAGTGATTGATTTTCTGAAAGATAACCAGCAGGGTGTACAAAACCCCCTCAACATTGACTGGGAAAGGGCTAACAGAATGCTGAAAAATATGAGGATTAAGACTAGACATCGCAACATGGAATTTAAGATTACTGGCTTGAGCCAGAAGTCCTGCCTTGAGCAATATTTTCCTATGAAATTGAAAAGCGGTGATGGCACTACTGAAGAGCAGACTGTGGACATTACTGTATATGAGTATTTCACCAAACATCGTGGCATAAAACTCACCTATTCTGCAAACTTGCCATGCCTTGATGTTGGCAAGCCAAAAAGGCCCAACTATGTGCCACTGGAGAGAGCTTCTATAGTTGGAAGTTCAAGGCAGAGGCCTCAGGAGAGAATAAACAGTGTGACTAATGGTGTAAGGAGTTATGGCTATAATGATGATCCTGTGCTTGCTGCATGCGGTATATCCATAGACAAGCAATTGACTCAGATTGAAGGTCATGTACTTGAGGCTCCAAAGAAAATTGAGCGCCCCAAAACTCTAATTGAGGAAGATCAGCTAGCTGAAAGACTAGGCCCTGTTGCTAGAGTAGACAAAATGTTTGAACAGATTCGGGCTAAGCTCCAAGAACCACCTGAGTTCATTCTCTGTGTCATACCAAAGAAAGGTTCTGATATCTATGGGCCTTGGAAGAAAAAAACTCTGGTTGACTATGGGATACCAACACAATGTATTTCCCCACCCAAGCTTATTAGCGATCTGTACCTGACTAATGTCCTTATGAAAATCAACACTAAGCTTGGAGGAATAAATTCTCTGTTGGCACTGGAGTACTCCTCACGTGTTCCTCTTATAAATGATACTCCTACAATGATTTTGGGGATGGATGTGTCTCATGGTTCTCCTGGGCGATCAGATGTTCCTTCAGTTGCTGCAGTAGTTGGCTCTCGAAATTGGCCTCTTATGTCAAGGTACAGAGCAGCTGTTAGAACACAATCTTCTAAGGTGGAGATGATTGATGGTCTATACAAGCCACTTCCAAATGGAAATGATGATGGTATTATCAGGGAACTGCTTCTGGACTTCTATAACACAAGCAAAGGACGCAAACCAACTCAGATCATTGTTTTCAGGGATGGAGTCGGTGAATCACAGTTTAATCAAGTGTTGAACATCGAACTGGATCAAATTGTAAAGGCTTACCGGCACCTTGGGGGGGAAGATGCTCCAAAGTTCACTCTCATTATAGCTCAAAAGAATCATCACACAAAGCTATTCCAAGCTAATAGCCCTGACAATGTTCCACCAGGGACAGTTGTTGACACAAAAATCGTGAACCCAAGGATCTATGATTTCTACATGTGTGCTCAGGCTGGCATGATTGGAACTTCGAGGCCAGCTCACTATCATGTCTTGCTTGATGAGATTGGCTTTTCCCCTGATGACTTGCAGAACCTGATTCACTCCCTTTCTTATGTGTACCAAAGGAGCTGTACTGCAATATCCATTGTGGCACCCATATGCTATGCGCACCTTGCTGCAGCACAAGTGGGGCAGTTTATGAAGTTTGAAGATCTCTTGGAAACTTCATCAGCGAAAGGTAGTGTCACAACATCAGAGAGCATCCCAGTTCCCGAGCTCCCTAGGCTTCATAAAAACGTCCAGAGCTCCATGTTCTTCTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

825

Amino Acids

91.73

Weight (kDa)

8.93

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	50 - 204	2.7e-26	N-terminal domain of argonaute
ArgoL1	PF08699	216 - 264	1.1e-14	Argonaute linker 1 domain
PAZ	PF02170	271 - 390	4.7e-22	PAZ domain
ArgoL2	PF16488	394 - 437	9.6e-12	Argonaute linker 2 domain
Piwi	PF02171	478 - 786	4.3e-105	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013703)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46800 FvH4_6g46800
malus_domestica	MD09G1067300.v1.1 MD17G1060400.v1.1
prunus_persica	Prupe.3G254500_v2.0.a1
pyrus_communis	pycom17g06010
rosa_chinensis	RchiOBHm_Chr2g0165791
rosa_laevigata	RLG00000021554
rosa_multiflora	Rmu_sc0003227.1_g000012
rosa_roxburghii	Rroxscaffold_2G00085520
rosa_rugosa	Rorug02G0517400 Rorug02G0517500 Rorug02G0517600
rosa_samantha	Rh2AG583100 Rh2BG595200 Rh2CG565800 Rh2DG605000
rosa_wichuraiana	Rw2G048640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1646
AarI	CACCTGC	1 cut(s)	17
Acc16I	TGCGCA	1 cut(s)	2322
Acc36I	ACCTGC	1 cut(s)	17
Acc65I	GGTACC	1 cut(s)	698
AccB1I	GGYRCC	4 cut(s)	14, 698, 1998, 2305
AccI	GTMKAC	1 cut(s)	1383
AciI	CCGC	5 cut(s)	98, 380, 753, 993, 1251
AclWI	GGATC	4 cut(s)	784, 1226, 1983, 2144
AcsI	RAATTY	3 cut(s)	317, 926, 1603
AcuI	CTGAAG	3 cut(s)	554, 1029, 1701
AcvI	CACGTG	1 cut(s)	1634
AfiI	CCNNNNNNNGG	4 cut(s)	266, 749, 1457, 2008
AflII	CTTAAG	1 cut(s)	610
AflIII	ACRYGT	2 cut(s)	1633, 2151
AgeI	ACCGGT	1 cut(s)	701
AhlI	ACTAGT	1 cut(s)	88
AjnI	CCWGG	4 cut(s)	82, 799, 1696, 2098
AjuI	GAANNNNNNNTTGG	2 cut(s)	1444, 1476
AleI	CACNNNNGTG	1 cut(s)	404
Alw21I	GWGCWC	5 cut(s)	449, 600, 2161, 2433, 2462
Alw26I	GTCTC	1 cut(s)	1689
AlwI	GGATC	4 cut(s)	784, 1226, 1983, 2144
AlwNI	CAGNNNCTG	3 cut(s)	203, 1724, 2248
Ama87I	CYCGRG	1 cut(s)	2426
ApeKI	GCWGC	9 cut(s)	382, 518, 616, 623, 1244, 1724, 1772, 2330, 2333
ApoI	RAATTY	3 cut(s)	317, 926, 1603
ArsI	GACNNNNNNTTYG	2 cut(s)	1376, 1408
AsiGI	ACCGGT	1 cut(s)	701
Asp700I	GAANNNNTTC	3 cut(s)	1401, 1603, 1866
Asp718I	GGTACC	1 cut(s)	698
AspA2I	CCTAGG	1 cut(s)	2435
AspLEI	GCGC	3 cut(s)	153, 1323, 2323
AspS9I	GGNCC	5 cut(s)	371, 803, 1119, 1367, 1475
AsuC2I	CCSGG	2 cut(s)	261, 442
AsuHPI	GGTGA	5 cut(s)	751, 1007, 1039, 1063, 1949
AsuNHI	GCTAGC	1 cut(s)	1351
AvaI	CYCGRG	1 cut(s)	2426
AvaII	GGWCC	1 cut(s)	803
AvrII	CCTAGG	1 cut(s)	2435
AxyI	CCTNAGG	1 cut(s)	1176
BanI	GGYRCC	4 cut(s)	14, 698, 1998, 2305
BanII	GRGCYC	3 cut(s)	449, 2433, 2462
BarI	GAAGNNNNNNTAC	2 cut(s)	1278, 1310
BbrPI	CACGTG	1 cut(s)	1634
BbsI	GAAGAC	1 cut(s)	632
Bbv12I	GWGCWC	5 cut(s)	449, 600, 2161, 2433, 2462
BbvI	GCAGC	9 cut(s)	369, 505, 628, 635, 1231, 1711, 1784, 2317, 2345
BceAI	ACGGC	1 cut(s)	164
BciT130I	CCWGG	4 cut(s)	84, 801, 1698, 2100
BciVI	GTATCC	1 cut(s)	1503
BcnI	CCSGG	2 cut(s)	261, 442
BcoDI	GTCTC	1 cut(s)	1689
BcuI	ACTAGT	1 cut(s)	88
BfmI	CTRYAG	3 cut(s)	1149, 1725, 2331
BfoI	RGCGCY	1 cut(s)	1324
BfrI	CTTAAG	1 cut(s)	610
BfuAI	ACCTGC	1 cut(s)	17
BfuI	GTATCC	1 cut(s)	1503
BglI	GCCNNNNNGGC	1 cut(s)	1117
BglII	AGATCT	1 cut(s)	2365
BlnI	CCTAGG	1 cut(s)	2435
BlpI	GCTNAGC	1 cut(s)	1410
BmcAI	AGTACT	2 cut(s)	712, 1625
Bme1390I	CCNGG	6 cut(s)	84, 261, 442, 801, 1698, 2100
Bme18I	GGWCC	1 cut(s)	803
BmeT110I	CYCGRG	1 cut(s)	2426
BmgT120I	GGNCC	5 cut(s)	371, 803, 1119, 1367, 1475
BmiI	GGNNCC	6 cut(s)	16, 96, 700, 1305, 2000, 2307
BmrFI	CCNGG	6 cut(s)	84, 261, 442, 801, 1698, 2100
BmrI	ACTGGG	2 cut(s)	874, 2414
BmsI	GCATC	7 cut(s)	190, 556, 574, 668, 690, 2005, 2424
BmtI	GCTAGC	1 cut(s)	1355
BmuI	ACTGGG	2 cut(s)	874, 2414
BoxI	GACNNNNGTC	1 cut(s)	1565
BpiI	GAAGAC	1 cut(s)	632
BplI	GAGNNNNNCTC	4 cut(s)	1613, 1645, 2176, 2208
BpmI	CTGGAG	3 cut(s)	658, 1157, 1640
Bpu10I	CCTNAGC	1 cut(s)	2160
Bpu1102I	GCTNAGC	1 cut(s)	1410
BpuEI	CTTGAG	3 cut(s)	964, 983, 1319
BpuMI	CCSGG	2 cut(s)	261, 442
BsaAI	YACGTR	1 cut(s)	1634
BsaJI	CCNNGG	7 cut(s)	312, 1478, 1697, 2002, 2099, 2132, 2435
BsaWI	WCCGGW	1 cut(s)	701
BsaXI	ACNNNNNCTCC	4 cut(s)	436, 466, 656, 686
Bsc4I	CCNNNNNNNGG	4 cut(s)	266, 749, 1457, 2008
Bse118I	RCCGGY	2 cut(s)	701, 1995
Bse21I	CCTNAGG	1 cut(s)	1176
BseBI	CCWGG	4 cut(s)	84, 801, 1698, 2100
BseDI	CCNNGG	7 cut(s)	312, 1478, 1697, 2002, 2099, 2132, 2435
BseGI	GGATG	8 cut(s)	68, 474, 641, 778, 1680, 1684, 1933, 2415
BseLI	CCNNNNNNNGG	4 cut(s)	266, 749, 1457, 2008
BseMII	CTCAG	6 cut(s)	761, 1190, 1292, 1419, 1922, 2174
BseRI	GAGGAG	1 cut(s)	1618
BseXI	GCAGC	9 cut(s)	369, 505, 628, 635, 1231, 1711, 1784, 2317, 2345
BsgI	GTGCAG	1 cut(s)	368
BshNI	GGYRCC	4 cut(s)	14, 698, 1998, 2305
BshTI	ACCGGT	1 cut(s)	701
BsiHKAI	GWGCWC	5 cut(s)	449, 600, 2161, 2433, 2462
BsiHKCI	CYCGRG	1 cut(s)	2426
BsiSI	CCGG	4 cut(s)	260, 441, 702, 1996
BslFI	GGGAC	3 cut(s)	47, 726, 2116
BslI	CCNNNNNNNGG	4 cut(s)	266, 749, 1457, 2008
BsmAI	GTCTC	1 cut(s)	1689
BsmFI	GGGAC	3 cut(s)	47, 726, 2116
BsmI	GAATGC	1 cut(s)	888
BsoBI	CYCGRG	1 cut(s)	2426
Bsp1286I	GDGCHC	5 cut(s)	449, 600, 2161, 2433, 2462
Bsp1407I	TGTACA	2 cut(s)	360, 841
Bsp143I	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
Bsp1720I	GCTNAGC	1 cut(s)	1410
BspACI	CCGC	5 cut(s)	98, 380, 753, 993, 1251
BspCNI	CTCAG	6 cut(s)	760, 1189, 1291, 1420, 1921, 2173
BspLI	GGNNCC	6 cut(s)	16, 96, 700, 1305, 2000, 2307
BspMAI	CTGCAG	2 cut(s)	1729, 2335
BspMI	ACCTGC	1 cut(s)	17
BspOI	GCTAGC	1 cut(s)	1355
BspPI	GGATC	4 cut(s)	784, 1226, 1983, 2144
BspQI	GCTCTTC	1 cut(s)	1005
BspT107I	GGYRCC	4 cut(s)	14, 698, 1998, 2305
BspTI	CTTAAG	1 cut(s)	610
BsrFI	RCCGGY	2 cut(s)	701, 1995
BsrGI	TGTACA	2 cut(s)	360, 841
BssAI	RCCGGY	2 cut(s)	701, 1995
BssECI	CCNNGG	7 cut(s)	312, 1478, 1697, 2002, 2099, 2132, 2435
BssMI	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
BssT1I	CCWWGG	4 cut(s)	1478, 2002, 2132, 2435
Bst2UI	CCWGG	4 cut(s)	84, 801, 1698, 2100
Bst4CI	ACNGT	9 cut(s)	367, 403, 654, 715, 1021, 1033, 1193, 1947, 2107
Bst6I	CTCTTC	2 cut(s)	381, 1005
BstAFI	CTTAAG	1 cut(s)	610
BstAUI	TGTACA	2 cut(s)	360, 841
BstBAI	YACGTR	1 cut(s)	1634
BstC8I	GCNNGC	8 cut(s)	165, 621, 1109, 1242, 1249, 1353, 2167, 2190
BstDEI	CTNAG	9 cut(s)	747, 1176, 1278, 1410, 1428, 1587, 1794, 1908, 2160
BstDSI	CCRYGG	1 cut(s)	312
BstF5I	GGATG	8 cut(s)	68, 474, 641, 778, 1680, 1684, 1933, 2415
BstH2I	RGCGCY	1 cut(s)	1324
BstHHI	GCGC	3 cut(s)	153, 1323, 2323
BstKTI	GATC	9 cut(s)	792, 1234, 1348, 1552, 1706, 1914, 1978, 2139, 2368
BstMAI	GTCTC	1 cut(s)	1689
BstMBI	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
BstMWI	GCNNNNNNNGC	7 cut(s)	23, 388, 999, 1117, 1896, 2327, 2437
BstNI	CCWGG	4 cut(s)	84, 801, 1698, 2100
BstNSI	RCATGY	2 cut(s)	1251, 2155
BstPAI	GACNNNNGTC	1 cut(s)	1565
BstSCI	CCNGG	6 cut(s)	82, 259, 440, 799, 1696, 2098
BstSFI	CTRYAG	3 cut(s)	1149, 1725, 2331
BstV1I	GCAGC	9 cut(s)	369, 505, 628, 635, 1231, 1711, 1784, 2317, 2345
BstV2I	GAAGAC	1 cut(s)	632
BstX2I	RGATCY	2 cut(s)	2136, 2365
BstYI	RGATCY	2 cut(s)	2136, 2365
Bsu36I	CCTNAGG	1 cut(s)	1176
BsuI	GTATCC	1 cut(s)	1503
BtgI	CCRYGG	1 cut(s)	312
BtgZI	GCGATG	1 cut(s)	899
BtsCI	GGATG	8 cut(s)	68, 474, 641, 778, 1680, 1684, 1933, 2415
BtsIMutI	CAGTG	8 cut(s)	192, 456, 684, 785, 813, 1133, 1198, 1616
BveI	ACCTGC	1 cut(s)	17
Cac8I	GCNNGC	8 cut(s)	165, 621, 1109, 1242, 1249, 1353, 2167, 2190
CaiI	CAGNNNCTG	3 cut(s)	203, 1724, 2248
CfoI	GCGC	3 cut(s)	153, 1323, 2323
Cfr10I	RCCGGY	2 cut(s)	701, 1995
Cfr13I	GGNCC	5 cut(s)	371, 803, 1119, 1367, 1475
CseI	GACGC	2 cut(s)	44, 1905
CspAI	ACCGGT	1 cut(s)	701
CspCI	CAANNNNNGTGG	2 cut(s)	1039, 1074
DdeI	CTNAG	9 cut(s)	747, 1176, 1278, 1410, 1428, 1587, 1794, 1908, 2160
DpnI	GATC	9 cut(s)	791, 1233, 1347, 1551, 1705, 1913, 1977, 2138, 2367
DpnII	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
Eam1104I	CTCTTC	2 cut(s)	381, 1005
EarI	CTCTTC	2 cut(s)	381, 1005
EciI	GGCGGA	1 cut(s)	87
Ecl136II	GAGCTC	3 cut(s)	447, 2431, 2460
Eco130I	CCWWGG	4 cut(s)	1478, 2002, 2132, 2435
Eco147I	AGGCCT	1 cut(s)	1174
Eco24I	GRGCYC	3 cut(s)	449, 2433, 2462
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	1 cut(s)	803
Eco53kI	GAGCTC	3 cut(s)	447, 2431, 2460
Eco57I	CTGAAG	3 cut(s)	554, 1029, 1701
Eco72I	CACGTG	1 cut(s)	1634
Eco81I	CCTNAGG	1 cut(s)	1176
Eco88I	CYCGRG	1 cut(s)	2426
EcoICRI	GAGCTC	3 cut(s)	447, 2431, 2460
EcoO109I	RGGNCCY	1 cut(s)	1367
EcoRII	CCWGG	4 cut(s)	82, 799, 1696, 2098
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	4 cut(s)	1478, 2002, 2132, 2435
EcoT22I	ATGCAT	2 cut(s)	589, 683
EcoT38I	GRGCYC	3 cut(s)	449, 2433, 2462
ErhI	CCWWGG	4 cut(s)	1478, 2002, 2132, 2435
FaqI	GGGAC	3 cut(s)	47, 726, 2116
FauNDI	CATATG	2 cut(s)	340, 2312
FblI	GTMKAC	1 cut(s)	1383
FokI	GGATG	8 cut(s)	55, 481, 648, 785, 1687, 1691, 1940, 2402
FriOI	GRGCYC	3 cut(s)	449, 2433, 2462
FspAI	RTGCGCAY	1 cut(s)	2322
FspI	TGCGCA	1 cut(s)	2322
GlaI	GCGC	3 cut(s)	152, 1322, 2322
GsuI	CTGGAG	3 cut(s)	658, 1157, 1640
HaeII	RGCGCY	1 cut(s)	1324
HapII	CCGG	4 cut(s)	260, 441, 702, 1996
HgaI	GACGC	2 cut(s)	44, 1905
HhaI	GCGC	3 cut(s)	153, 1323, 2323
Hin6I	GCGC	3 cut(s)	151, 1321, 2321
HinP1I	GCGC	3 cut(s)	151, 1321, 2321
HincII	GTYRAC	2 cut(s)	1501, 2113
HindII	GTYRAC	2 cut(s)	1501, 2113
HindIII	AAGCTT	2 cut(s)	1538, 1589
HinfI	GANTC	8 cut(s)	416, 671, 1276, 1402, 1932, 1940, 2050, 2251
HpaII	CCGG	4 cut(s)	260, 441, 702, 1996
HphI	GGTGA	5 cut(s)	751, 1007, 1039, 1063, 1949
Hpy188I	TCNGA	7 cut(s)	534, 822, 1281, 1465, 1708, 1911, 2410
HpyAV	CCTTC	3 cut(s)	551, 1280, 1725
HpyCH4III	ACNGT	9 cut(s)	367, 403, 654, 715, 1021, 1033, 1193, 1947, 2107
HpyCH4IV	ACGT	3 cut(s)	690, 1633, 2451
HpyF10VI	GCNNNNNNNGC	7 cut(s)	23, 388, 999, 1117, 1896, 2327, 2437
HpyF3I	CTNAG	9 cut(s)	747, 1176, 1278, 1410, 1428, 1587, 1794, 1908, 2160
HpySE526I	ACGT	3 cut(s)	690, 1633, 2451
HspAI	GCGC	3 cut(s)	151, 1321, 2321
KpnI	GGTACC	1 cut(s)	702
Kzo9I	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
LguI	GCTCTTC	1 cut(s)	1005
LmnI	GCTCC	9 cut(s)	100, 444, 560, 1309, 1419, 2023, 2280, 2436, 2465
Lsp1109I	GCAGC	9 cut(s)	369, 505, 628, 635, 1231, 1711, 1784, 2317, 2345
LweI	GCATC	7 cut(s)	190, 556, 574, 668, 690, 2005, 2424
MaeII	ACGT	3 cut(s)	690, 1633, 2451
MaeIII	GTNAC	3 cut(s)	454, 1195, 2398
MalI	GATC	9 cut(s)	791, 1233, 1347, 1551, 1705, 1913, 1977, 2138, 2367
MboI	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
MfeI	CAATTG	2 cut(s)	540, 1271
MflI	RGATCY	2 cut(s)	2136, 2365
MhlI	GDGCHC	5 cut(s)	449, 600, 2161, 2433, 2462
MlyI	GAGTC	3 cut(s)	665, 1270, 1941
MmeI	TCCRAC	2 cut(s)	83, 1135
Mph1103I	ATGCAT	2 cut(s)	589, 683
MroXI	GAANNNNTTC	3 cut(s)	1401, 1603, 1866
MseI	TTAA	5 cut(s)	611, 707, 903, 930, 1950
MslI	CAYNNNNRTG	3 cut(s)	404, 2199, 2311
MspA1I	CMGCKG	2 cut(s)	382, 1775
MspCI	CTTAAG	1 cut(s)	610
MspI	CCGG	4 cut(s)	260, 441, 702, 1996
MspR9I	CCNGG	6 cut(s)	84, 261, 442, 801, 1698, 2100
MunI	CAATTG	2 cut(s)	540, 1271
Mva1269I	GAATGC	1 cut(s)	888
MvaI	CCWGG	4 cut(s)	84, 801, 1698, 2100
MwoI	GCNNNNNNNGC	7 cut(s)	23, 388, 999, 1117, 1896, 2327, 2437
NciI	CCSGG	2 cut(s)	261, 442
NdeI	CATATG	2 cut(s)	340, 2312
NdeII	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
NheI	GCTAGC	1 cut(s)	1351
NlaIV	GGNNCC	6 cut(s)	16, 96, 700, 1305, 2000, 2307
NmuCI	GTSAC	3 cut(s)	454, 1195, 2398
NsbI	TGCGCA	1 cut(s)	2322
NsiI	ATGCAT	2 cut(s)	589, 683
NspI	RCATGY	2 cut(s)	1251, 2155
OliI	CACNNNNGTG	1 cut(s)	404
PaeI	GCATGC	1 cut(s)	1251
PaqCI	CACCTGC	1 cut(s)	17
PceI	AGGCCT	1 cut(s)	1174
PciI	ACATGT	1 cut(s)	2151
PciSI	GCTCTTC	1 cut(s)	1005
PctI	GAATGC	1 cut(s)	888
PdmI	GAANNNNTTC	3 cut(s)	1401, 1603, 1866
PfeI	GAWTC	5 cut(s)	416, 1402, 1940, 2050, 2251
PflFI	GACNNNGTC	1 cut(s)	605
PinAI	ACCGGT	1 cut(s)	701
PleI	GAGTC	3 cut(s)	665, 1270, 1940
PmaCI	CACGTG	1 cut(s)	1634
PmlI	CACGTG	1 cut(s)	1634
PpsI	GAGTC	3 cut(s)	665, 1270, 1940
Ppu21I	YACGTR	1 cut(s)	1634
PscI	ACATGT	1 cut(s)	2151
PshAI	GACNNNNGTC	1 cut(s)	1565
PsiI	TTATAA	1 cut(s)	1646
Psp124BI	GAGCTC	3 cut(s)	449, 2433, 2462
Psp6I	CCWGG	4 cut(s)	82, 799, 1696, 2098
PspCI	CACGTG	1 cut(s)	1634
PspGI	CCWGG	4 cut(s)	82, 799, 1696, 2098
PspN4I	GGNNCC	6 cut(s)	16, 96, 700, 1305, 2000, 2307
PspPI	GGNCC	5 cut(s)	371, 803, 1119, 1367, 1475
PstI	CTGCAG	2 cut(s)	1729, 2335
PstNI	CAGNNNCTG	3 cut(s)	203, 1724, 2248
PsuI	RGATCY	2 cut(s)	2136, 2365
PsyI	GACNNNGTC	1 cut(s)	605
PvuII	CAGCTG	1 cut(s)	1775
RseI	CAYNNNNRTG	3 cut(s)	404, 2199, 2311
SacI	GAGCTC	3 cut(s)	449, 2433, 2462
SapI	GCTCTTC	1 cut(s)	1005
SaqAI	TTAA	5 cut(s)	611, 707, 903, 930, 1950
Sau3AI	GATC	9 cut(s)	789, 1231, 1345, 1549, 1703, 1911, 1975, 2136, 2365
Sau96I	GGNCC	5 cut(s)	371, 803, 1119, 1367, 1475
ScaI	AGTACT	2 cut(s)	712, 1625
SchI	GAGTC	3 cut(s)	665, 1270, 1941
ScrFI	CCNGG	6 cut(s)	84, 261, 442, 801, 1698, 2100
SduI	GDGCHC	5 cut(s)	449, 600, 2161, 2433, 2462
SfaNI	GCATC	7 cut(s)	190, 556, 574, 668, 690, 2005, 2424
SfcI	CTRYAG	3 cut(s)	1149, 1725, 2331
SinI	GGWCC	1 cut(s)	803
SmiMI	CAYNNNNRTG	3 cut(s)	404, 2199, 2311
SmlI	CTYRAG	4 cut(s)	610, 943, 962, 1298
SmoI	CTYRAG	4 cut(s)	610, 943, 962, 1298
SpeI	ACTAGT	1 cut(s)	88
SphI	GCATGC	1 cut(s)	1251
SseBI	AGGCCT	1 cut(s)	1174
SsiI	CCGC	5 cut(s)	98, 380, 753, 993, 1251
SspI	AATATT	1 cut(s)	971
SstI	GAGCTC	3 cut(s)	449, 2433, 2462
StuI	AGGCCT	1 cut(s)	1174
StyD4I	CCNGG	6 cut(s)	82, 259, 440, 799, 1696, 2098
StyI	CCWWGG	4 cut(s)	1478, 2002, 2132, 2435
TaaI	ACNGT	9 cut(s)	367, 403, 654, 715, 1021, 1033, 1193, 1947, 2107
TaiI	ACGT	3 cut(s)	693, 1636, 2454
TaqI	TCGA	5 cut(s)	600, 694, 1741, 1968, 2183
TatI	WGTACW	6 cut(s)	360, 710, 841, 1294, 1623, 2285
TauI	GCSGC	1 cut(s)	756
TfiI	GAWTC	5 cut(s)	416, 1402, 1940, 2050, 2251
Tru1I	TTAA	5 cut(s)	611, 707, 903, 930, 1950
Tru9I	TTAA	5 cut(s)	611, 707, 903, 930, 1950
TscAI	CASTG	8 cut(s)	192, 463, 691, 792, 813, 1140, 1198, 1623
TseFI	GTSAC	3 cut(s)	454, 1195, 2398
TseI	GCWGC	9 cut(s)	382, 518, 616, 623, 1244, 1724, 1772, 2330, 2333
Tsp45I	GTSAC	3 cut(s)	454, 1195, 2398
TspDTI	ATGAA	9 cut(s)	252, 450, 485, 995, 1423, 1589, 2369, 2370, 2432
TspGWI	ACGGA	2 cut(s)	301, 481
TspRI	CASTG	8 cut(s)	192, 463, 691, 792, 813, 1140, 1198, 1623
Tth111I	GACNNNGTC	1 cut(s)	605
Vha464I	CTTAAG	1 cut(s)	610
VpaK11BI	GGWCC	1 cut(s)	803
XapI	RAATTY	3 cut(s)	317, 926, 1603
XceI	RCATGY	2 cut(s)	1251, 2155
XmaJI	CCTAGG	1 cut(s)	2435
XmiI	GTMKAC	1 cut(s)	1383
XmnI	GAANNNNTTC	3 cut(s)	1401, 1603, 1866
ZrmI	AGTACT	2 cut(s)	712, 1625
Zsp2I	ATGCAT	2 cut(s)	589, 683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.