Rorug02G0517500

Ras GTPase-activating protein-binding protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
64840316 .. 64840775
460 bp
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UTR
Exon/CDS
Intron
Rorug02G0517500.1

Sequence Viewer

Length: 213 bp
ATGTCTCTTCTTGTTTTTAACTTTGTTCCCAACGGTATAAAAAAAGCATTATCTTCAAAGCAGAGAGCATCTATAGTTGGAAATTCAAGGCAAAGGCCTCAGGACAGAATAAACAGTTTGACTAATTTGAAGGTAGGAAACAGTTACGAATGCATGCCTTCAGATGGGAGATGGAACTTCAATGGCAAGCTATTGTATCCACCTCAATTATAA

Protein Analysis

70

Amino Acids

7.9

Weight (kDa)

10.38

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013703)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 211
AcsI RAATTY 1 cut(s) 82
AcuI CTGAAG 1 cut(s) 144
AfiI CCNNNNNNNGG 1 cut(s) 164
AgsI TTSAA 4 cut(s) 57, 87, 130, 181
AluBI AGCT 1 cut(s) 190
AluI AGCT 1 cut(s) 190
Alw26I GTCTC 1 cut(s) 9
AoxI GGCC 1 cut(s) 95
ApoI RAATTY 1 cut(s) 82
AxyI CCTNAGG 1 cut(s) 99
BccI CCATC 2 cut(s) 158, 165
BciVI GTATCC 1 cut(s) 207
BcoDI GTCTC 1 cut(s) 9
BfmI CTRYAG 1 cut(s) 72
BfuI GTATCC 1 cut(s) 207
BmsI GCATC 1 cut(s) 77
Bsc4I CCNNNNNNNGG 1 cut(s) 164
Bse21I CCTNAGG 1 cut(s) 99
BseLI CCNNNNNNNGG 1 cut(s) 164
BseMII CTCAG 1 cut(s) 113
BshFI GGCC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 164
BsmAI GTCTC 1 cut(s) 9
BsmI GAATGC 1 cut(s) 155
BsnI GGCC 1 cut(s) 97
BspANI GGCC 1 cut(s) 97
BspCNI CTCAG 1 cut(s) 112
Bst4CI ACNGT 3 cut(s) 35, 116, 143
Bst6I CTCTTC 1 cut(s) 12
BstC8I GCNNGC 2 cut(s) 155, 188
BstDEI CTNAG 1 cut(s) 99
BstMAI GTCTC 1 cut(s) 9
BstNSI RCATGY 1 cut(s) 157
BstSFI CTRYAG 1 cut(s) 72
Bsu36I CCTNAGG 1 cut(s) 99
BsuI GTATCC 1 cut(s) 207
BsuRI GGCC 1 cut(s) 97
Cac8I GCNNGC 2 cut(s) 155, 188
CviAII CATG 1 cut(s) 154
CviJI RGCY 2 cut(s) 97, 190
CviKI_1 RGCY 2 cut(s) 97, 190
DdeI CTNAG 1 cut(s) 99
Eam1104I CTCTTC 1 cut(s) 12
EarI CTCTTC 1 cut(s) 12
Eco147I AGGCCT 1 cut(s) 97
Eco57I CTGAAG 1 cut(s) 144
Eco81I CCTNAGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 155
FaeI CATG 1 cut(s) 157
FaiI YATR 4 cut(s) 38, 74, 155, 211
FatI CATG 1 cut(s) 153
HaeIII GGCC 1 cut(s) 97
Hin1II CATG 1 cut(s) 157
Hpy188I TCNGA 1 cut(s) 163
Hpy188III TCNNGA 1 cut(s) 101
HpyAV CCTTC 2 cut(s) 124, 168
HpyCH4III ACNGT 3 cut(s) 35, 116, 143
HpyCH4V TGCA 1 cut(s) 153
HpyF3I CTNAG 1 cut(s) 99
Hsp92II CATG 1 cut(s) 157
LpnPI CCDG 1 cut(s) 86
LweI GCATC 1 cut(s) 77
MaeIII GTNAC 1 cut(s) 143
MboII GAAGA 1 cut(s) 45
MluCI AATT 3 cut(s) 82, 124, 206
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 2 cut(s) 108, 213
Mph1103I ATGCAT 1 cut(s) 155
MseI TTAA 1 cut(s) 18
Mva1269I GAATGC 1 cut(s) 155
NlaIII CATG 1 cut(s) 157
NsiI ATGCAT 1 cut(s) 155
NspI RCATGY 1 cut(s) 157
PaeI GCATGC 1 cut(s) 157
PceI AGGCCT 1 cut(s) 97
PctI GAATGC 1 cut(s) 155
PsiI TTATAA 1 cut(s) 211
SaqAI TTAA 1 cut(s) 18
SetI ASST 3 cut(s) 135, 192, 205
SfaNI GCATC 1 cut(s) 77
SfcI CTRYAG 1 cut(s) 72
SgeI CNNG 5 cut(s) 23, 99, 113, 166, 199
SphI GCATGC 1 cut(s) 157
Sse9I AATT 3 cut(s) 82, 124, 206
SseBI AGGCCT 1 cut(s) 97
StuI AGGCCT 1 cut(s) 97
TaaI ACNGT 3 cut(s) 35, 116, 143
TasI AATT 3 cut(s) 82, 124, 206
Tru1I TTAA 1 cut(s) 18
Tru9I TTAA 1 cut(s) 18
XapI RAATTY 1 cut(s) 82
XceI RCATGY 1 cut(s) 157
Zsp2I ATGCAT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.