transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G28857 AT5G15160 AT5G39860 |
| fragaria_vesca | FvH4_3g04290 FvH4_6g48970 |
| malus_domestica | MD09G1049300.v1.1 MD17G1049300.v1.1 |
| prunus_persica | Prupe.3G269500_v2.0.a1 Prupe.3G269500_v2.0.a1 Prupe.3G269500_v2.0.a1 |
| pyrus_communis | pycom111g04030 |
| rosa_chinensis | RchiOBHm_Chr2g0168811 |
| rosa_roxburghii | Rroxscaffold_2G00082660 |
| rosa_rugosa | Rorug02G0535300 |
| rosa_samantha | Rh2AG606400 Rh2BG619200 Rh2CG587800 Rh2DG629800 |
| rosa_wichuraiana | Rw2G050260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 199 |
| AciI | CCGC | 2 cut(s) | 199, 246 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AgsI | TTSAA | 1 cut(s) | 62 |
| AluBI | AGCT | 2 cut(s) | 156, 261 |
| AluI | AGCT | 2 cut(s) | 156, 261 |
| Alw26I | GTCTC | 2 cut(s) | 73, 140 |
| AoxI | GGCC | 1 cut(s) | 243 |
| ApeKI | GCWGC | 1 cut(s) | 153 |
| AspLEI | GCGC | 2 cut(s) | 81, 111 |
| AspS9I | GGNCC | 1 cut(s) | 136 |
| AsuC2I | CCSGG | 1 cut(s) | 239 |
| AvaII | GGWCC | 1 cut(s) | 136 |
| BbvI | GCAGC | 1 cut(s) | 165 |
| BcnI | CCSGG | 1 cut(s) | 239 |
| BcoDI | GTCTC | 2 cut(s) | 73, 140 |
| BfaI | CTAG | 1 cut(s) | 6 |
| BfoI | RGCGCY | 1 cut(s) | 112 |
| BisI | GCNGC | 3 cut(s) | 154, 200, 246 |
| BlsI | GCNGC | 3 cut(s) | 155, 201, 247 |
| Bme1390I | CCNGG | 1 cut(s) | 239 |
| Bme18I | GGWCC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 1 cut(s) | 136 |
| BmiI | GGNNCC | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 239 |
| BmsI | GCATC | 2 cut(s) | 137, 217 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 188, 220 |
| BpuMI | CCSGG | 1 cut(s) | 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| Bse1I | ACTGG | 1 cut(s) | 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseMII | CTCAG | 1 cut(s) | 84 |
| BseNI | ACTGG | 1 cut(s) | 90 |
| BseXI | GCAGC | 1 cut(s) | 165 |
| BshFI | GGCC | 1 cut(s) | 245 |
| BsiSI | CCGG | 1 cut(s) | 239 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmAI | GTCTC | 2 cut(s) | 73, 140 |
| BsnI | GGCC | 1 cut(s) | 245 |
| Bsp143I | GATC | 1 cut(s) | 39 |
| BspACI | CCGC | 2 cut(s) | 199, 246 |
| BspANI | GGCC | 1 cut(s) | 245 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspLI | GGNNCC | 1 cut(s) | 90 |
| BsrBI | CCGCTC | 1 cut(s) | 199 |
| BsrI | ACTGG | 1 cut(s) | 90 |
| BssMI | GATC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 3 cut(s) | 93, 132, 191 |
| BstH2I | RGCGCY | 1 cut(s) | 112 |
| BstHHI | GCGC | 2 cut(s) | 81, 111 |
| BstKTI | GATC | 1 cut(s) | 42 |
| BstMAI | GTCTC | 2 cut(s) | 73, 140 |
| BstMBI | GATC | 1 cut(s) | 39 |
| BstSCI | CCNGG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 1 cut(s) | 165 |
| BsuRI | GGCC | 1 cut(s) | 245 |
| CfoI | GCGC | 2 cut(s) | 81, 111 |
| Cfr13I | GGNCC | 1 cut(s) | 136 |
| CviJI | RGCY | 5 cut(s) | 156, 202, 237, 245, 261 |
| CviKI_1 | RGCY | 5 cut(s) | 156, 202, 237, 245, 261 |
| DdeI | CTNAG | 3 cut(s) | 93, 132, 191 |
| DpnI | GATC | 1 cut(s) | 41 |
| DpnII | GATC | 1 cut(s) | 39 |
| Eco47I | GGWCC | 1 cut(s) | 136 |
| EcoO109I | RGGNCCY | 1 cut(s) | 136 |
| FaiI | YATR | 1 cut(s) | 251 |
| Fnu4HI | GCNGC | 3 cut(s) | 154, 200, 246 |
| Fsp4HI | GCNGC | 3 cut(s) | 154, 200, 246 |
| FspBI | CTAG | 1 cut(s) | 6 |
| GlaI | GCGC | 2 cut(s) | 80, 110 |
| GluI | GCNGC | 3 cut(s) | 154, 200, 246 |
| HaeII | RGCGCY | 1 cut(s) | 112 |
| HaeIII | GGCC | 1 cut(s) | 245 |
| HapII | CCGG | 1 cut(s) | 239 |
| HhaI | GCGC | 2 cut(s) | 81, 111 |
| Hin6I | GCGC | 2 cut(s) | 79, 109 |
| HinP1I | GCGC | 2 cut(s) | 79, 109 |
| HincII | GTYRAC | 1 cut(s) | 184 |
| HindII | GTYRAC | 1 cut(s) | 184 |
| HinfI | GANTC | 1 cut(s) | 97 |
| HpaII | CCGG | 1 cut(s) | 239 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 2 cut(s) | 115, 164 |
| Hpy188III | TCNNGA | 4 cut(s) | 27, 92, 101, 217 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 1 cut(s) | 153 |
| HpyF3I | CTNAG | 3 cut(s) | 93, 132, 191 |
| HspAI | GCGC | 2 cut(s) | 79, 109 |
| Kzo9I | GATC | 1 cut(s) | 39 |
| LmnI | GCTCC | 2 cut(s) | 116, 258 |
| LpnPI | CCDG | 4 cut(s) | 12, 71, 105, 252 |
| Lsp1109I | GCAGC | 1 cut(s) | 165 |
| LweI | GCATC | 2 cut(s) | 137, 217 |
| MaeI | CTAG | 1 cut(s) | 6 |
| MalI | GATC | 1 cut(s) | 41 |
| MbiI | CCGCTC | 1 cut(s) | 199 |
| MboI | GATC | 1 cut(s) | 39 |
| MfeI | CAATTG | 1 cut(s) | 222 |
| MluCI | AATT | 3 cut(s) | 74, 222, 252 |
| MmeI | TCCRAC | 2 cut(s) | 59, 138 |
| MnlI | CCTC | 3 cut(s) | 12, 172, 235 |
| MspI | CCGG | 1 cut(s) | 239 |
| MspR9I | CCNGG | 1 cut(s) | 239 |
| MunI | CAATTG | 1 cut(s) | 222 |
| NciI | CCSGG | 1 cut(s) | 239 |
| NdeII | GATC | 1 cut(s) | 39 |
| NlaIV | GGNNCC | 1 cut(s) | 90 |
| PfeI | GAWTC | 1 cut(s) | 97 |
| PkrI | GCNGC | 3 cut(s) | 155, 201, 247 |
| PpuMI | RGGWCCY | 1 cut(s) | 136 |
| Psp5II | RGGWCCY | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 1 cut(s) | 90 |
| PspPI | GGNCC | 1 cut(s) | 136 |
| PspPPI | RGGWCCY | 1 cut(s) | 136 |
| SatI | GCNGC | 3 cut(s) | 154, 200, 246 |
| Sau3AI | GATC | 1 cut(s) | 39 |
| Sau96I | GGNCC | 1 cut(s) | 136 |
| ScrFI | CCNGG | 1 cut(s) | 239 |
| SetI | ASST | 7 cut(s) | 17, 123, 138, 158, 183, 192, 263 |
| SfaNI | GCATC | 2 cut(s) | 137, 217 |
| SinI | GGWCC | 1 cut(s) | 136 |
| Sse9I | AATT | 3 cut(s) | 74, 222, 252 |
| SsiI | CCGC | 2 cut(s) | 199, 246 |
| SspMI | CTAG | 1 cut(s) | 6 |
| StyD4I | CCNGG | 1 cut(s) | 237 |
| TaqI | TCGA | 2 cut(s) | 17, 218 |
| TasI | AATT | 3 cut(s) | 74, 222, 252 |
| TauI | GCSGC | 2 cut(s) | 202, 248 |
| TfiI | GAWTC | 1 cut(s) | 97 |
| TseI | GCWGC | 1 cut(s) | 153 |
| VpaK11BI | GGWCC | 1 cut(s) | 136 |
| XspI | CTAG | 1 cut(s) | 6 |