Prupe.3G273700_v2.0.a1

Xylosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
25318342 .. 25321405
3064 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G273700.1

Sequence Viewer

Length: 1287 bp
ATGAAGAAGCTAAAGAGCTATTACACGCATCTGAGGCACCACCAGTCCATGGAGCTCAAATGGATCTTCCCTTTGGCCATAGGCTCCATCGTCTCTCTCTTCCTTCTCTTCCTCACCACGCTCACTTCACCTGACGGCACGCCTCTGCTTCCCTTCTACCGCTCCTTTTCCATCTCCAGCTCCGTTTTCATCGAATCCAAGCTCCACCCACTGCCCGTTTCTTATCTCCCGCCTCCTCCGCGCTTCGCTTACTTCATCTCCGGCTCCAATGGCGATGGCAAAATGCTCAAGCGGACCCTTCAAGCCCTTTACCACCCTCACAACCGCTATGTGGTTCACTTGGACCTCGAGGCACCGCCCGAGGAGCGTCTGGATCTGCAGAATTACGTTTCTACCCACCCTGTTTTTGTAAAGTTCGGCAATGTGAAGATGATCACCAAGGCCAATCTCGTCACTTACAGGGGTCCGACTATGGTGGCCAACACGCTTCACGCTGCCGCTATTTTGTTGAAGGAAGGCGGCGATTGGGATTGGTTTATCAATCTCAGTGCTTCTGATTACCCACTTGTTACTCAGGATGATCTGCTGCACACGTTCTCATACTTACCGCGCGATCTCAATTTCATCGATCATACTAGCAACATTGGGTGGAAAGAGTACCAAAGAGCAAAACCGATAATTGTAGATCCAGGGTTGTATATGACAAAAAAAGCTGATGTTTTTTGGGTTACACAGCGAAGGAGTGTGCCAACAGCTTTCAAACTCTTTACAGGTTCTGCGTGGATGGCACTTTCTAAGCCTTTTGTTGATTACTGCATATGGGGATGGGACAACCTACCTCGAACTGTTCTCATGTATTATGCAAACTTTTTATCATCTCCCGAAGGATACTTCCACACCGTCATTTGTAATGCTCAAGAGTTCCGCAACACAACTGTGAATAGTGATCTGCATTTCATAACATGGGACAACCCTCCAAAGCAACACCCTCACCACCTCAACCTTGGAGACATGCAAAGGATGATTGACAGCAAGGCTCCCTTTGCAAGAAAGTTTCACCAAGATGATCCAGTGCTTGACAAAATCGATTCTGAGTTGTTGTTTAAGGGTCCAGGTATGCTTGTTCCTGGTGGTTGGTGCATAGGAAAAAGGGACAATGGGTCTGATCCATGCTCTGTTGTTGGTAACACTACAGTCCTCAGGCCTAGCCCTGGAGCAAAACGGCTAGAAGTTTTGATCAGCTCTCTATTGTCTAACGAGAATTTCCGATCAAAACAGTGCAAATGA

Protein Analysis

429

Amino Acids

48.85

Weight (kDa)

9.05

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010699)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 347
AccB1I GGYRCC 2 cut(s) 36, 352
AccB7I CCANNNNNTGG 1 cut(s) 49
AccBSI CCGCTC 1 cut(s) 162
AccII CGCG 3 cut(s) 241, 610, 612
AclWI GGATC 5 cut(s) 71, 381, 680, 1061, 1160
AcoI YGGCCR 2 cut(s) 75, 477
AcsI RAATTY 1 cut(s) 1261
AfaI GTAC 1 cut(s) 659
AfiI CCNNNNNNNGG 3 cut(s) 49, 331, 1211
AflIII ACRYGT 1 cut(s) 591
AgsI TTSAA 3 cut(s) 302, 511, 760
AhdI GACNNNNNGTC 1 cut(s) 1159
AjnI CCWGG 4 cut(s) 688, 1111, 1126, 1210
AleI CACNNNNGTG 1 cut(s) 935
AluBI AGCT 8 cut(s) 10, 18, 55, 180, 202, 713, 755, 1242
AluI AGCT 8 cut(s) 10, 18, 55, 180, 202, 713, 755, 1242
Alw21I GWGCWC 1 cut(s) 57
Alw26I GTCTC 2 cut(s) 97, 1002
AlwI GGATC 5 cut(s) 71, 381, 680, 1061, 1160
AlwNI CAGNNNCTG 1 cut(s) 776
Ama87I CYCGRG 2 cut(s) 347, 359
AoxI GGCC 4 cut(s) 75, 441, 477, 1202
ApeKI GCWGC 2 cut(s) 494, 586
ApoI RAATTY 1 cut(s) 1261
AspLEI GCGC 2 cut(s) 243, 612
AspS9I GGNCC 4 cut(s) 294, 343, 464, 1109
AsuHPI GGTGA 5 cut(s) 106, 120, 427, 983, 1049
AvaI CYCGRG 2 cut(s) 347, 359
AvaII GGWCC 4 cut(s) 294, 343, 464, 1109
AxyI CCTNAGG 1 cut(s) 1199
BalI TGGCCA 2 cut(s) 77, 479
BanI GGYRCC 2 cut(s) 36, 352
BanII GRGCYC 1 cut(s) 57
Bbv12I GWGCWC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 481, 573
BccI CCATC 5 cut(s) 95, 179, 269, 778, 819
BceAI ACGGC 2 cut(s) 151, 1238
BciT130I CCWGG 4 cut(s) 690, 1113, 1128, 1212
BciVI GTATCC 1 cut(s) 881
BclI TGATCA 2 cut(s) 432, 1236
BcoDI GTCTC 2 cut(s) 97, 1002
BfaI CTAG 3 cut(s) 636, 1206, 1226
BfmI CTRYAG 2 cut(s) 377, 1191
BfuI GTATCC 1 cut(s) 881
BisI GCNGC 4 cut(s) 495, 498, 520, 587
BlsI GCNGC 4 cut(s) 496, 499, 521, 588
Bme1390I CCNGG 4 cut(s) 690, 1113, 1128, 1212
Bme18I GGWCC 4 cut(s) 294, 343, 464, 1109
BmeRI GACNNNNNGTC 1 cut(s) 1159
BmeT110I CYCGRG 2 cut(s) 347, 359
BmgT120I GGNCC 4 cut(s) 294, 343, 464, 1109
BmiI GGNNCC 8 cut(s) 38, 85, 265, 296, 354, 465, 1038, 1110
BmrFI CCNGG 4 cut(s) 690, 1113, 1128, 1212
BmsI GCATC 1 cut(s) 37
BpmI CTGGAG 2 cut(s) 160, 1233
BpuEI CTTGAG 2 cut(s) 272, 900
Bsa29I ATCGAT 2 cut(s) 627, 1086
BsaJI CCNNGG 6 cut(s) 48, 360, 438, 689, 1003, 1210
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 3 cut(s) 49, 331, 1211
Bse1I ACTGG 2 cut(s) 43, 1070
Bse21I CCTNAGG 1 cut(s) 1199
Bse3DI GCAATG 1 cut(s) 427
BseBI CCWGG 4 cut(s) 690, 1113, 1128, 1212
BseCI ATCGAT 2 cut(s) 627, 1086
BseDI CCNNGG 6 cut(s) 48, 360, 438, 689, 1003, 1210
BseGI GGATG 4 cut(s) 583, 789, 830, 1026
BseLI CCNNNNNNNGG 3 cut(s) 49, 331, 1211
BseMI GCAATG 1 cut(s) 427
BseMII CTCAG 5 cut(s) 23, 559, 587, 1083, 1213
BseNI ACTGG 2 cut(s) 43, 1070
BseRI GAGGAG 2 cut(s) 225, 377
BseXI GCAGC 2 cut(s) 481, 573
BsgI GTGCAG 1 cut(s) 572
Bsh1236I CGCG 3 cut(s) 241, 610, 612
BshFI GGCC 4 cut(s) 77, 443, 479, 1204
BshNI GGYRCC 2 cut(s) 36, 352
BshVI ATCGAT 2 cut(s) 627, 1086
BsiHKAI GWGCWC 1 cut(s) 57
BsiHKCI CYCGRG 2 cut(s) 347, 359
BsiSI CCGG 1 cut(s) 261
BslFI GGGAC 3 cut(s) 842, 980, 1166
BslI CCNNNNNNNGG 3 cut(s) 49, 331, 1211
BsmAI GTCTC 2 cut(s) 97, 1002
BsmBI CGTCTC 1 cut(s) 97
BsmFI GGGAC 3 cut(s) 842, 980, 1166
BsnI GGCC 4 cut(s) 77, 443, 479, 1204
BsoBI CYCGRG 2 cut(s) 347, 359
Bsp1286I GDGCHC 1 cut(s) 57
Bsp19I CCATGG 1 cut(s) 48
BspANI GGCC 4 cut(s) 77, 443, 479, 1204
BspCNI CTCAG 5 cut(s) 24, 558, 586, 1084, 1212
BspDI ATCGAT 2 cut(s) 627, 1086
BspFNI CGCG 3 cut(s) 241, 610, 612
BspLI GGNNCC 8 cut(s) 38, 85, 265, 296, 354, 465, 1038, 1110
BspMAI CTGCAG 1 cut(s) 381
BspPI GGATC 5 cut(s) 71, 381, 680, 1061, 1160
BspT107I GGYRCC 2 cut(s) 36, 352
BsrBI CCGCTC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 427
BsrI ACTGG 2 cut(s) 43, 1070
BssECI CCNNGG 6 cut(s) 48, 360, 438, 689, 1003, 1210
BssT1I CCWWGG 3 cut(s) 48, 438, 1003
Bst2UI CCWGG 4 cut(s) 690, 1113, 1128, 1212
Bst4CI ACNGT 5 cut(s) 847, 901, 937, 1195, 1278
Bst6I CTCTTC 2 cut(s) 104, 113
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 6 cut(s) 32, 545, 573, 795, 1092, 1199
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 4 cut(s) 583, 789, 830, 1026
BstFNI CGCG 3 cut(s) 241, 610, 612
BstHHI GCGC 2 cut(s) 243, 612
BstMAI GTCTC 2 cut(s) 97, 1002
BstMWI GCNNNNNNNGC 6 cut(s) 34, 238, 270, 364, 785, 1043
BstNI CCWGG 4 cut(s) 690, 1113, 1128, 1212
BstNSI RCATGY 1 cut(s) 1015
BstSCI CCNGG 4 cut(s) 688, 1111, 1126, 1210
BstSFI CTRYAG 2 cut(s) 377, 1191
BstUI CGCG 3 cut(s) 241, 610, 612
BstV1I GCAGC 2 cut(s) 481, 573
BstX2I RGATCY 3 cut(s) 63, 373, 685
BstYI RGATCY 3 cut(s) 63, 373, 685
Bsu15I ATCGAT 2 cut(s) 627, 1086
Bsu36I CCTNAGG 1 cut(s) 1199
BsuI GTATCC 1 cut(s) 881
BsuRI GGCC 4 cut(s) 77, 443, 479, 1204
BsuTUI ATCGAT 2 cut(s) 627, 1086
BtgI CCRYGG 1 cut(s) 48
BtgZI GCGATG 1 cut(s) 288
BtsCI GGATG 4 cut(s) 583, 789, 830, 1026
BtsI GCAGTG 1 cut(s) 209
BtsIMutI CAGTG 4 cut(s) 209, 553, 1077, 1283
Cac8I GCNNGC 1 cut(s) 140
CaiI CAGNNNCTG 1 cut(s) 776
CfoI GCGC 2 cut(s) 243, 612
Cfr13I GGNCC 4 cut(s) 294, 343, 464, 1109
ClaI ATCGAT 2 cut(s) 627, 1086
CseI GACGC 1 cut(s) 356
Csp6I GTAC 1 cut(s) 658
CviAII CATG 5 cut(s) 49, 853, 963, 1012, 1170
CviQI GTAC 1 cut(s) 658
DdeI CTNAG 6 cut(s) 32, 545, 573, 795, 1092, 1199
DriI GACNNNNNGTC 1 cut(s) 1159
EaeI YGGCCR 2 cut(s) 75, 477
Eam1104I CTCTTC 2 cut(s) 104, 113
Eam1105I GACNNNNNGTC 1 cut(s) 1159
EarI CTCTTC 2 cut(s) 104, 113
Ecl136II GAGCTC 1 cut(s) 55
Eco130I CCWWGG 3 cut(s) 48, 438, 1003
Eco147I AGGCCT 1 cut(s) 1204
Eco24I GRGCYC 1 cut(s) 57
Eco47I GGWCC 4 cut(s) 294, 343, 464, 1109
Eco53kI GAGCTC 1 cut(s) 55
Eco81I CCTNAGG 1 cut(s) 1199
Eco88I CYCGRG 2 cut(s) 347, 359
EcoICRI GAGCTC 1 cut(s) 55
EcoRII CCWGG 4 cut(s) 688, 1111, 1126, 1210
EcoT14I CCWWGG 3 cut(s) 48, 438, 1003
EcoT38I GRGCYC 1 cut(s) 57
ErhI CCWWGG 3 cut(s) 48, 438, 1003
Esp3I CGTCTC 1 cut(s) 97
FaeI CATG 5 cut(s) 52, 856, 966, 1015, 1173
FalI AAGNNNNNCTT 2 cut(s) 1025, 1057
FaqI GGGAC 3 cut(s) 842, 980, 1166
FatI CATG 5 cut(s) 48, 852, 962, 1011, 1169
FauI CCCGC 1 cut(s) 237
FauNDI CATATG 1 cut(s) 818
FbaI TGATCA 2 cut(s) 432, 1236
Fnu4HI GCNGC 4 cut(s) 495, 498, 520, 587
FokI GGATG 4 cut(s) 590, 796, 837, 1033
FriOI GRGCYC 1 cut(s) 57
Fsp4HI GCNGC 4 cut(s) 495, 498, 520, 587
FspBI CTAG 3 cut(s) 636, 1206, 1226
GlaI GCGC 2 cut(s) 242, 611
GluI GCNGC 4 cut(s) 495, 498, 520, 587
GsuI CTGGAG 2 cut(s) 160, 1233
HaeIII GGCC 4 cut(s) 77, 443, 479, 1204
HapII CCGG 1 cut(s) 261
HgaI GACGC 1 cut(s) 356
HhaI GCGC 2 cut(s) 243, 612
Hin1II CATG 5 cut(s) 52, 856, 966, 1015, 1173
Hin6I GCGC 2 cut(s) 241, 610
HinP1I GCGC 2 cut(s) 241, 610
HinfI GANTC 2 cut(s) 194, 1088
HpaII CCGG 1 cut(s) 261
HphI GGTGA 5 cut(s) 106, 120, 427, 983, 1049
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 6 cut(s) 33, 468, 556, 1093, 1165, 1268
Hpy188III TCNNGA 4 cut(s) 371, 575, 881, 917
Hpy8I GTNNAC 1 cut(s) 337
HpyAV CCTTC 7 cut(s) 113, 163, 308, 505, 509, 732, 878
HpyCH4III ACNGT 5 cut(s) 847, 901, 937, 1195, 1278
HpyCH4IV ACGT 2 cut(s) 387, 593
HpyCH4V TGCA 9 cut(s) 379, 589, 816, 863, 952, 1015, 1046, 1140, 1281
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 238, 270, 364, 785, 1043
HpyF3I CTNAG 6 cut(s) 32, 545, 573, 795, 1092, 1199
HpySE526I ACGT 2 cut(s) 387, 593
Hsp92II CATG 5 cut(s) 52, 856, 966, 1015, 1173
HspAI GCGC 2 cut(s) 241, 610
Ksp22I TGATCA 2 cut(s) 432, 1236
LmnI GCTCC 9 cut(s) 52, 89, 167, 185, 207, 269, 364, 1042, 1214
Lsp1109I GCAGC 2 cut(s) 481, 573
LweI GCATC 1 cut(s) 37
MaeI CTAG 3 cut(s) 636, 1206, 1226
MaeII ACGT 2 cut(s) 387, 593
MaeIII GTNAC 4 cut(s) 451, 568, 727, 1184
MbiI CCGCTC 1 cut(s) 162
MboII GAAGA 5 cut(s) 16, 58, 91, 100, 439
MflI RGATCY 3 cut(s) 63, 373, 685
MhlI GDGCHC 1 cut(s) 57
MlsI TGGCCA 2 cut(s) 77, 479
MluCI AATT 4 cut(s) 382, 619, 678, 1261
MluNI TGGCCA 2 cut(s) 77, 479
MmeI TCCRAC 1 cut(s) 491
Mox20I TGGCCA 2 cut(s) 77, 479
MscI TGGCCA 2 cut(s) 77, 479
MseI TTAA 1 cut(s) 1104
MslI CAYNNNNRTG 2 cut(s) 935, 1062
Msp20I TGGCCA 2 cut(s) 77, 479
MspI CCGG 1 cut(s) 261
MspR9I CCNGG 4 cut(s) 690, 1113, 1128, 1212
MvaI CCWGG 4 cut(s) 690, 1113, 1128, 1212
MvnI CGCG 3 cut(s) 241, 610, 612
MwoI GCNNNNNNNGC 6 cut(s) 34, 238, 270, 364, 785, 1043
NcoI CCATGG 1 cut(s) 48
NdeI CATATG 1 cut(s) 818
NlaIII CATG 5 cut(s) 52, 856, 966, 1015, 1173
NlaIV GGNNCC 8 cut(s) 38, 85, 265, 296, 354, 465, 1038, 1110
NmuCI GTSAC 1 cut(s) 451
NspI RCATGY 1 cut(s) 1015
OliI CACNNNNGTG 1 cut(s) 935
PaeR7I CTCGAG 1 cut(s) 347
PceI AGGCCT 1 cut(s) 1204
PfeI GAWTC 2 cut(s) 194, 1088
PflMI CCANNNNNTGG 1 cut(s) 49
PkrI GCNGC 4 cut(s) 496, 499, 521, 588
Psp124BI GAGCTC 1 cut(s) 57
Psp6I CCWGG 4 cut(s) 688, 1111, 1126, 1210
PspGI CCWGG 4 cut(s) 688, 1111, 1126, 1210
PspN4I GGNNCC 8 cut(s) 38, 85, 265, 296, 354, 465, 1038, 1110
PspPI GGNCC 4 cut(s) 294, 343, 464, 1109
PspXI VCTCGAGB 1 cut(s) 347
PstI CTGCAG 1 cut(s) 381
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 3 cut(s) 63, 373, 685
RsaI GTAC 1 cut(s) 659
RsaNI GTAC 1 cut(s) 658
RseI CAYNNNNRTG 2 cut(s) 935, 1062
SacI GAGCTC 1 cut(s) 57
SaqAI TTAA 1 cut(s) 1104
SatI GCNGC 4 cut(s) 495, 498, 520, 587
Sau96I GGNCC 4 cut(s) 294, 343, 464, 1109
ScrFI CCNGG 4 cut(s) 690, 1113, 1128, 1212
SduI GDGCHC 1 cut(s) 57
SfaNI GCATC 1 cut(s) 37
SfcI CTRYAG 2 cut(s) 377, 1191
Sfr274I CTCGAG 1 cut(s) 347
SinI GGWCC 4 cut(s) 294, 343, 464, 1109
SlaI CTCGAG 1 cut(s) 347
SmiMI CAYNNNNRTG 2 cut(s) 935, 1062
SmlI CTYRAG 3 cut(s) 287, 347, 915
SmoI CTYRAG 3 cut(s) 287, 347, 915
Sse9I AATT 4 cut(s) 382, 619, 678, 1261
SseBI AGGCCT 1 cut(s) 1204
SspMI CTAG 3 cut(s) 636, 1206, 1226
SstI GAGCTC 1 cut(s) 57
StuI AGGCCT 1 cut(s) 1204
StyD4I CCNGG 4 cut(s) 688, 1111, 1126, 1210
StyI CCWWGG 3 cut(s) 48, 438, 1003
TaaI ACNGT 5 cut(s) 847, 901, 937, 1195, 1278
TaiI ACGT 2 cut(s) 390, 596
TaqI TCGA 5 cut(s) 192, 348, 627, 841, 1086
TasI AATT 4 cut(s) 382, 619, 678, 1261
TauI GCSGC 2 cut(s) 500, 522
TfiI GAWTC 2 cut(s) 194, 1088
Tru1I TTAA 1 cut(s) 1104
Tru9I TTAA 1 cut(s) 1104
TscAI CASTG 4 cut(s) 216, 553, 1077, 1283
TseFI GTSAC 1 cut(s) 451
TseI GCWGC 2 cut(s) 494, 586
Tsp45I GTSAC 1 cut(s) 451
TspDTI ATGAA 5 cut(s) 17, 178, 244, 613, 946
TspGWI ACGGA 1 cut(s) 172
TspRI CASTG 4 cut(s) 216, 553, 1077, 1283
Van91I CCANNNNNTGG 1 cut(s) 49
VpaK11BI GGWCC 4 cut(s) 294, 343, 464, 1109
XapI RAATTY 1 cut(s) 1261
XceI RCATGY 1 cut(s) 1015
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XhoI CTCGAG 1 cut(s) 347
XspI CTAG 3 cut(s) 636, 1206, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.