Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010699

Physical Location & Seq

Genomic Coordinates Reverse (-)

4995631 .. 4999183

Gene Structure 3553 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00082120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGAAGAAGCTGAAGAGCTATTACATGCATCTGAGGCACCAGCAGCAGCAGAAGACCATGGAGCTCAAATGGATCTTCCCGCTGGCGATTGGCTCCATCGTCTCTCTCTTCCTCCTCTTCCTCACCACGCTAACCTCACCCGACGGTTCACCCTTGCTTCCCTTCTACCGCTACTCCATTTCCCTCTCCAGCTCCGTCTTCATCGAATCCAAGCTCCACCCTCTCCCCGTCTCCTACCTCCCGCCGCCGCCGCGCTTCGCCTACTTCGTCTCGGGCTCTAACGGCGACGGCAAGATGCTCAAACGGACGTTAGAGGCGCTCTACCACCCGCACAACCAGTACGTGGTGCACTTGGACCTGGAGTCGCCGCCGGAGGAGCGGTTGGATCTGCAGAATTACGTTTCTGCCCACCCGGTCTTTGTCAAGTACCAAAGAGCCAAGCCCTTAATTGTGGATCCTGGGTTGTATATGACAAAGAAGGCTGATGTGTTTTGGGTTACGCAGCGCCGGAGTGTGCCAACAGCTTTCAAGCTTTTTACAGGTTCTGCTTGGATGGCACTTTCAAAGCCTTTTATTGACTACTGTATATGGGGATGGGACAACCTACCTCGAACTGTTCTGATGTATTATGCAAACTTTATATCATCCCCAGAAGGATACTTTCACACTGTCATCTGTAATGCACAAGAGTTCCACAACACAACTGTGAATACTGACCTACATTTCATAACATGGGACAATCCTCCCAAGCAACATCCGCACCACCTCAACCTTGGAGATATGCAAAGGATGATTAGCAGCAATGCTCCATTTGCAAGAAAGTTTCGCAAAGACGATCCAGTGCTTGACAAAATTGATTCTGAGCTATTATTTAAGGGTCCAGGCATGCTTGTTCCTGGTGGTTGGTGCACAGGAAGAAGGGAAAATGGGTCTGATCCATGCTCTGTTATTGGTAATACCACAGTTCTCAGGCCTAGTCCTGGAGCAAAAAGGCTAGAACTTTTGATCAGCTCGCTAATGTCAAACGAGAACTTCCGACCAAAACAGTGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000902 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006029 GO:0006807 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009826 GO:0009987 GO:0010033 GO:0010721 GO:0010975 GO:0010977 GO:0012505 GO:0015020 GO:0016020 GO:0016043 GO:0016049 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0022008 GO:0030154 GO:0030166 GO:0031090 GO:0031344 GO:0031345 GO:0031984 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0032989 GO:0034097 GO:0034645 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045596 GO:0045664 GO:0045665 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048679 GO:0048681 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050768 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051128 GO:0051129 GO:0051239 GO:0051241 GO:0051960 GO:0051961 GO:0060284 GO:0060560 GO:0065007 GO:0070555 GO:0070570 GO:0070571 GO:0071704 GO:0071840 GO:0080134 GO:0080135 GO:0098588 GO:0098791 GO:0120035 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903034 GO:1903035 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Branch

Protein Analysis

351

Amino Acids

40.24

Weight (kDa)

9.33

Isoelectric Point (pI)

49.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Branch	PF02485	86 - 135	2.7e-08	Core-2/I-Branching enzyme
Branch	PF02485	142 - 264	3.8e-32	Core-2/I-Branching enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15050 AT5G39990
fragaria_vesca	FvH4_6g49530
malus_domestica	MD09G1044100.v1.1 MD17G1046000.v1.1
prunus_persica	Prupe.3G273700_v2.0.a1
pyrus_communis	pycom111g03430 pycom111g03440 pycom17g04110
rosa_chinensis	RchiOBHm_Chr2g0169441
rosa_laevigata	RLG00000021864
rosa_multiflora	Rmu_sc0004665.1_g000013 Rmu_sc0006806.1_g000039
rosa_roxburghii	Rroxscaffold_2G00082120
rosa_rugosa	Rorug02G0540000
rosa_samantha	Rh2AG611400 Rh2BG625100 Rh2CG593400 Rh2DG635700
rosa_wichuraiana	Rw2G050740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	36
AccB7I	CCANNNNNTGG	1 cut(s)	343
AccBSI	CCGCTC	1 cut(s)	379
AccII	CGCG	1 cut(s)	253
AclWI	GGATC	6 cut(s)	80, 393, 449, 462, 830, 929
AcuI	CTGAAG	1 cut(s)	32
AfaI	GTAC	2 cut(s)	341, 428
AfiI	CCNNNNNNNGG	2 cut(s)	343, 980
AgsI	TTSAA	2 cut(s)	529, 564
AhdI	GACNNNNNGTC	1 cut(s)	361
AjnI	CCWGG	5 cut(s)	357, 457, 880, 895, 979
AleI	CACNNNNGTG	1 cut(s)	704
AluBI	AGCT	9 cut(s)	10, 18, 64, 192, 214, 524, 532, 865, 1011
AluI	AGCT	9 cut(s)	10, 18, 64, 192, 214, 524, 532, 865, 1011
Alw21I	GWGCWC	3 cut(s)	66, 351, 911
Alw26I	GTCTC	3 cut(s)	106, 235, 274
Alw44I	GTGCAC	2 cut(s)	347, 907
AlwI	GGATC	6 cut(s)	80, 393, 449, 462, 830, 929
AlwNI	CAGNNNCTG	1 cut(s)	545
Ama87I	CYCGRG	1 cut(s)	271
AoxI	GGCC	1 cut(s)	971
ApaLI	GTGCAC	2 cut(s)	347, 907
ApeKI	GCWGC	4 cut(s)	43, 46, 502, 798
AspLEI	GCGC	3 cut(s)	255, 319, 507
AspS9I	GGNCC	2 cut(s)	355, 878
AsuC2I	CCSGG	1 cut(s)	413
AsuHPI	GGTGA	3 cut(s)	115, 129, 141
AvaI	CYCGRG	1 cut(s)	271
AvaII	GGWCC	2 cut(s)	355, 878
BaeGI	GKGCMC	2 cut(s)	351, 911
BamHI	GGATCC	1 cut(s)	454
BanI	GGYRCC	1 cut(s)	36
BanII	GRGCYC	2 cut(s)	66, 278
BarI	GAAGNNNNNNTAC	1 cut(s)	37
BbsI	GAAGAC	2 cut(s)	59, 190
Bbv12I	GWGCWC	3 cut(s)	66, 351, 911
BbvI	GCAGC	4 cut(s)	55, 58, 514, 810
BccI	CCATC	3 cut(s)	104, 547, 588
BceAI	ACGGC	2 cut(s)	298, 304
BciT130I	CCWGG	5 cut(s)	359, 459, 882, 897, 981
BciVI	GTATCC	1 cut(s)	650
BclI	TGATCA	1 cut(s)	1005
BcnI	CCSGG	1 cut(s)	413
BcoDI	GTCTC	3 cut(s)	106, 235, 274
BfaI	CTAG	2 cut(s)	975, 995
BfmI	CTRYAG	1 cut(s)	389
BfoI	RGCGCY	2 cut(s)	320, 508
BfuI	GTATCC	1 cut(s)	650
BisI	GCNGC	8 cut(s)	44, 47, 245, 248, 251, 368, 503, 799
BlsI	GCNGC	8 cut(s)	45, 48, 246, 249, 252, 369, 504, 800
Bme1390I	CCNGG	6 cut(s)	359, 413, 459, 882, 897, 981
Bme18I	GGWCC	2 cut(s)	355, 878
BmeRI	GACNNNNNGTC	1 cut(s)	361
BmeT110I	CYCGRG	1 cut(s)	271
BmgT120I	GGNCC	2 cut(s)	355, 878
BmiI	GGNNCC	4 cut(s)	38, 94, 456, 879
BmrFI	CCNGG	6 cut(s)	359, 413, 459, 882, 897, 981
BmsI	GCATC	2 cut(s)	37, 285
BpiI	GAAGAC	2 cut(s)	59, 190
BpmI	CTGGAG	3 cut(s)	172, 380, 1002
BpuMI	CCSGG	1 cut(s)	413
BsaAI	YACGTR	1 cut(s)	343
BsaJI	CCNNGG	3 cut(s)	57, 458, 772
BsaXI	ACNNNNNCTCC	4 cut(s)	158, 188, 365, 395
Bsc4I	CCNNNNNNNGG	2 cut(s)	343, 980
Bse1I	ACTGG	2 cut(s)	337, 839
Bse3DI	GCAATG	1 cut(s)	808
BseBI	CCWGG	5 cut(s)	359, 459, 882, 897, 981
BseDI	CCNNGG	3 cut(s)	57, 458, 772
BseGI	GGATG	5 cut(s)	558, 599, 644, 754, 795
BseLI	CCNNNNNNNGG	2 cut(s)	343, 980
BseMI	GCAATG	1 cut(s)	808
BseMII	CTCAG	3 cut(s)	23, 852, 982
BseNI	ACTGG	2 cut(s)	337, 839
BseRI	GAGGAG	2 cut(s)	104, 389
BseSI	GKGCMC	2 cut(s)	351, 911
BseXI	GCAGC	4 cut(s)	55, 58, 514, 810
Bsh1236I	CGCG	1 cut(s)	253
BshFI	GGCC	1 cut(s)	973
BshNI	GGYRCC	1 cut(s)	36
BsiHKAI	GWGCWC	3 cut(s)	66, 351, 911
BsiHKCI	CYCGRG	1 cut(s)	271
BsiSI	CCGG	3 cut(s)	371, 413, 508
BslFI	GGGAC	2 cut(s)	611, 749
BslI	CCNNNNNNNGG	2 cut(s)	343, 980
BsmAI	GTCTC	3 cut(s)	106, 235, 274
BsmBI	CGTCTC	3 cut(s)	106, 235, 274
BsmFI	GGGAC	2 cut(s)	611, 749
BsnI	GGCC	1 cut(s)	973
BsoBI	CYCGRG	1 cut(s)	271
Bsp1286I	GDGCHC	4 cut(s)	66, 278, 351, 911
Bsp143I	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
Bsp19I	CCATGG	1 cut(s)	57
BspANI	GGCC	1 cut(s)	973
BspCNI	CTCAG	3 cut(s)	24, 853, 981
BspFNI	CGCG	1 cut(s)	253
BspLI	GGNNCC	4 cut(s)	38, 94, 456, 879
BspMAI	CTGCAG	1 cut(s)	393
BspPI	GGATC	6 cut(s)	80, 393, 449, 462, 830, 929
BspQI	GCTCTTC	1 cut(s)	8
BspT107I	GGYRCC	1 cut(s)	36
BsrBI	CCGCTC	1 cut(s)	379
BsrDI	GCAATG	1 cut(s)	808
BsrI	ACTGG	2 cut(s)	337, 839
BssECI	CCNNGG	3 cut(s)	57, 458, 772
BssMI	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
BssT1I	CCWWGG	2 cut(s)	57, 772
Bst2UI	CCWGG	5 cut(s)	359, 459, 882, 897, 981
Bst4CI	ACNGT	7 cut(s)	146, 584, 616, 670, 706, 964, 1047
Bst6I	CTCTTC	3 cut(s)	8, 113, 122
BstBAI	YACGTR	1 cut(s)	343
BstC8I	GCNNGC	3 cut(s)	84, 887, 1013
BstDEI	CTNAG	3 cut(s)	32, 861, 968
BstDSI	CCRYGG	1 cut(s)	57
BstF5I	GGATG	5 cut(s)	558, 599, 644, 754, 795
BstFNI	CGCG	1 cut(s)	253
BstH2I	RGCGCY	2 cut(s)	320, 508
BstHHI	GCGC	3 cut(s)	255, 319, 507
BstKTI	GATC	6 cut(s)	75, 388, 457, 838, 937, 1008
BstMAI	GTCTC	3 cut(s)	106, 235, 274
BstMBI	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 43, 250, 282, 376, 554, 757, 812
BstNI	CCWGG	5 cut(s)	359, 459, 882, 897, 981
BstNSI	RCATGY	2 cut(s)	28, 889
BstSCI	CCNGG	6 cut(s)	357, 411, 457, 880, 895, 979
BstSFI	CTRYAG	1 cut(s)	389
BstSLI	GKGCMC	2 cut(s)	351, 911
BstUI	CGCG	1 cut(s)	253
BstV1I	GCAGC	4 cut(s)	55, 58, 514, 810
BstV2I	GAAGAC	2 cut(s)	59, 190
BstX2I	RGATCY	3 cut(s)	72, 385, 454
BstYI	RGATCY	3 cut(s)	72, 385, 454
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	1 cut(s)	973
BtgI	CCRYGG	1 cut(s)	57
BtsCI	GGATG	5 cut(s)	558, 599, 644, 754, 795
BtsIMutI	CAGTG	3 cut(s)	666, 846, 1052
Cac8I	GCNNGC	3 cut(s)	84, 887, 1013
CaiI	CAGNNNCTG	1 cut(s)	545
CfoI	GCGC	3 cut(s)	255, 319, 507
Cfr13I	GGNCC	2 cut(s)	355, 878
Csp6I	GTAC	2 cut(s)	340, 427
CviAII	CATG	5 cut(s)	25, 58, 732, 886, 939
CviQI	GTAC	2 cut(s)	340, 427
DdeI	CTNAG	3 cut(s)	32, 861, 968
DpnI	GATC	6 cut(s)	74, 387, 456, 837, 936, 1007
DpnII	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
DriI	GACNNNNNGTC	1 cut(s)	361
Eam1104I	CTCTTC	3 cut(s)	8, 113, 122
Eam1105I	GACNNNNNGTC	1 cut(s)	361
EarI	CTCTTC	3 cut(s)	8, 113, 122
Ecl136II	GAGCTC	1 cut(s)	64
Eco130I	CCWWGG	2 cut(s)	57, 772
Eco147I	AGGCCT	1 cut(s)	973
Eco24I	GRGCYC	2 cut(s)	66, 278
Eco47I	GGWCC	2 cut(s)	355, 878
Eco53kI	GAGCTC	1 cut(s)	64
Eco57I	CTGAAG	1 cut(s)	32
Eco88I	CYCGRG	1 cut(s)	271
EcoICRI	GAGCTC	1 cut(s)	64
EcoRII	CCWGG	5 cut(s)	357, 457, 880, 895, 979
EcoT14I	CCWWGG	2 cut(s)	57, 772
EcoT22I	ATGCAT	1 cut(s)	30
EcoT38I	GRGCYC	2 cut(s)	66, 278
ErhI	CCWWGG	2 cut(s)	57, 772
Esp3I	CGTCTC	3 cut(s)	106, 235, 274
FaeI	CATG	5 cut(s)	28, 61, 735, 889, 942
FaqI	GGGAC	2 cut(s)	611, 749
FatI	CATG	5 cut(s)	24, 57, 731, 885, 938
FauI	CCCGC	3 cut(s)	87, 249, 336
FbaI	TGATCA	1 cut(s)	1005
Fnu4HI	GCNGC	8 cut(s)	44, 47, 245, 248, 251, 368, 503, 799
FokI	GGATG	5 cut(s)	565, 606, 631, 741, 802
FriOI	GRGCYC	2 cut(s)	66, 278
Fsp4HI	GCNGC	8 cut(s)	44, 47, 245, 248, 251, 368, 503, 799
FspBI	CTAG	2 cut(s)	975, 995
GlaI	GCGC	3 cut(s)	254, 318, 506
GluI	GCNGC	8 cut(s)	44, 47, 245, 248, 251, 368, 503, 799
GsuI	CTGGAG	3 cut(s)	172, 380, 1002
HaeII	RGCGCY	2 cut(s)	320, 508
HaeIII	GGCC	1 cut(s)	973
HapII	CCGG	3 cut(s)	371, 413, 508
HhaI	GCGC	3 cut(s)	255, 319, 507
Hin1II	CATG	5 cut(s)	28, 61, 735, 889, 942
Hin6I	GCGC	3 cut(s)	253, 317, 505
HinP1I	GCGC	3 cut(s)	253, 317, 505
HindIII	AAGCTT	1 cut(s)	530
HinfI	GANTC	3 cut(s)	206, 362, 857
HpaII	CCGG	3 cut(s)	371, 413, 508
HphI	GGTGA	3 cut(s)	115, 129, 141
Hpy166II	GTNNAC	3 cut(s)	149, 349, 909
Hpy188I	TCNGA	5 cut(s)	33, 621, 862, 934, 1037
Hpy8I	GTNNAC	3 cut(s)	149, 349, 909
Hpy99I	CGWCG	2 cut(s)	146, 290
HpyAV	CCTTC	4 cut(s)	172, 472, 647, 912
HpyCH4III	ACNGT	7 cut(s)	146, 584, 616, 670, 706, 964, 1047
HpyCH4IV	ACGT	3 cut(s)	308, 342, 399
HpyCH4V	TGCA	9 cut(s)	28, 349, 391, 632, 683, 784, 815, 909, 1050
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 43, 250, 282, 376, 554, 757, 812
HpyF3I	CTNAG	3 cut(s)	32, 861, 968
HpySE526I	ACGT	3 cut(s)	308, 342, 399
Hsp92II	CATG	5 cut(s)	28, 61, 735, 889, 942
HspAI	GCGC	3 cut(s)	253, 317, 505
Ksp22I	TGATCA	1 cut(s)	1005
Kzo9I	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
LguI	GCTCTTC	1 cut(s)	8
LmnI	GCTCC	7 cut(s)	61, 98, 197, 219, 376, 811, 983
Lsp1109I	GCAGC	4 cut(s)	55, 58, 514, 810
LweI	GCATC	2 cut(s)	37, 285
MaeI	CTAG	2 cut(s)	975, 995
MaeII	ACGT	3 cut(s)	308, 342, 399
MaeIII	GTNAC	1 cut(s)	496
MalI	GATC	6 cut(s)	74, 387, 456, 837, 936, 1007
MbiI	CCGCTC	1 cut(s)	379
MboI	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
MboII	GAAGA	8 cut(s)	16, 25, 64, 67, 100, 109, 190, 927
MflI	RGATCY	3 cut(s)	72, 385, 454
MhlI	GDGCHC	4 cut(s)	66, 278, 351, 911
MluCI	AATT	3 cut(s)	394, 447, 852
MlyI	GAGTC	1 cut(s)	371
MmeI	TCCRAC	1 cut(s)	363
Mph1103I	ATGCAT	1 cut(s)	30
MseI	TTAA	2 cut(s)	446, 873
MslI	CAYNNNNRTG	1 cut(s)	704
MspA1I	CMGCKG	1 cut(s)	82
MspI	CCGG	3 cut(s)	371, 413, 508
MspR9I	CCNGG	6 cut(s)	359, 413, 459, 882, 897, 981
MvaI	CCWGG	5 cut(s)	359, 459, 882, 897, 981
MvnI	CGCG	1 cut(s)	253
MwoI	GCNNNNNNNGC	8 cut(s)	34, 43, 250, 282, 376, 554, 757, 812
NciI	CCSGG	1 cut(s)	413
NcoI	CCATGG	1 cut(s)	57
NdeII	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
NlaIII	CATG	5 cut(s)	28, 61, 735, 889, 942
NlaIV	GGNNCC	4 cut(s)	38, 94, 456, 879
NsiI	ATGCAT	1 cut(s)	30
NspI	RCATGY	2 cut(s)	28, 889
OliI	CACNNNNGTG	1 cut(s)	704
PaeI	GCATGC	1 cut(s)	889
PceI	AGGCCT	1 cut(s)	973
PciSI	GCTCTTC	1 cut(s)	8
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PfeI	GAWTC	2 cut(s)	206, 857
PflMI	CCANNNNNTGG	1 cut(s)	343
PfoI	TCCNGGA	1 cut(s)	979
PkrI	GCNGC	8 cut(s)	45, 48, 246, 249, 252, 369, 504, 800
PleI	GAGTC	1 cut(s)	370
PpsI	GAGTC	1 cut(s)	370
Ppu21I	YACGTR	1 cut(s)	343
Psp124BI	GAGCTC	1 cut(s)	66
Psp6I	CCWGG	5 cut(s)	357, 457, 880, 895, 979
PspGI	CCWGG	5 cut(s)	357, 457, 880, 895, 979
PspN4I	GGNNCC	4 cut(s)	38, 94, 456, 879
PspPI	GGNCC	2 cut(s)	355, 878
PstI	CTGCAG	1 cut(s)	393
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	3 cut(s)	72, 385, 454
RsaI	GTAC	2 cut(s)	341, 428
RsaNI	GTAC	2 cut(s)	340, 427
RseI	CAYNNNNRTG	1 cut(s)	704
SacI	GAGCTC	1 cut(s)	66
SapI	GCTCTTC	1 cut(s)	8
SaqAI	TTAA	2 cut(s)	446, 873
SatI	GCNGC	8 cut(s)	44, 47, 245, 248, 251, 368, 503, 799
Sau3AI	GATC	6 cut(s)	72, 385, 454, 835, 934, 1005
Sau96I	GGNCC	2 cut(s)	355, 878
SchI	GAGTC	1 cut(s)	371
ScrFI	CCNGG	6 cut(s)	359, 413, 459, 882, 897, 981
SduI	GDGCHC	4 cut(s)	66, 278, 351, 911
SfaNI	GCATC	2 cut(s)	37, 285
SfcI	CTRYAG	1 cut(s)	389
SinI	GGWCC	2 cut(s)	355, 878
SmiMI	CAYNNNNRTG	1 cut(s)	704
SphI	GCATGC	1 cut(s)	889
Sse9I	AATT	3 cut(s)	394, 447, 852
SseBI	AGGCCT	1 cut(s)	973
SspMI	CTAG	2 cut(s)	975, 995
SstI	GAGCTC	1 cut(s)	66
StuI	AGGCCT	1 cut(s)	973
StyD4I	CCNGG	6 cut(s)	357, 411, 457, 880, 895, 979
StyI	CCWWGG	2 cut(s)	57, 772
TaaI	ACNGT	7 cut(s)	146, 584, 616, 670, 706, 964, 1047
TaiI	ACGT	3 cut(s)	311, 345, 402
TaqI	TCGA	2 cut(s)	204, 610
TasI	AATT	3 cut(s)	394, 447, 852
TauI	GCSGC	4 cut(s)	247, 250, 253, 370
TfiI	GAWTC	2 cut(s)	206, 857
Tru1I	TTAA	2 cut(s)	446, 873
Tru9I	TTAA	2 cut(s)	446, 873
TscAI	CASTG	3 cut(s)	673, 846, 1052
TseI	GCWGC	4 cut(s)	43, 46, 502, 798
TspDTI	ATGAA	3 cut(s)	17, 190, 715
TspGWI	ACGGA	2 cut(s)	184, 319
TspRI	CASTG	3 cut(s)	673, 846, 1052
Van91I	CCANNNNNTGG	1 cut(s)	343
VneI	GTGCAC	2 cut(s)	347, 907
VpaK11BI	GGWCC	2 cut(s)	355, 878
XceI	RCATGY	2 cut(s)	28, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	770
XspI	CTAG	2 cut(s)	975, 995
Zsp2I	ATGCAT	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.