Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010099

Physical Location & Seq

Genomic Coordinates Forward (+)

25459223 .. 25464461

Gene Structure 5239 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G276800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3492 bp

ATGGCTTTCTCGTCGTACATTGGCAGCACCCGCCGGGGAGGGTGGGCCAACTCCCTCCTCCCCTCCTCTTCCAACCCCAAATCCAAGCTCACCAGAAAGCCCCGCCGGCGATTGCCCCTCCGAGACTTCATCTTCGCCAACTTCTTCACCATCGGCCTCTCGATCTCGCTCTTCTTTTTCTTCGTCGTCATCCTCCGTTACGGCGTTCCCAGCCCCCTCTCCTCCCACTTCAAATCCAAATCCTCCACCCGTTTCCCCAAGCCCCGAAAGTCCGCTTTCCGCAAACCAGTTTCGGCCGGCGATTCGGGCGGCGACGCCGCGATGGGGGCCACCGTCGACATCACGACCAAGGAGCTGTACGACAAGATTGAGTTCTCGGATGTGGACGGTGGGCCCTGGAAGCAGGGGTGGAGGGTGAGTTACAAAGGGGACGAGTGGGACTCTGAGAAATTGAAGGTGATTGTGGTGCCCCATTCGCATAACGATCCTGGCTGGAAGCTCACTGTCGAAGAGTACTATGAGAGGCAGTCCAAGCATATACTGGACACCATTGTCGACACGCTTTCGAAGGATACCCGGCGCAAGTTTATATGGGAAGAGATGTCTTATCTGGAAAGATGGTGGAGGGACTCCTCTGACCTCAAAAGGGAATCATTCACCAATTTGGTGAAGAATGGTCAGCTGGAAATTGTTGGAGGTGGCTGGGTAATGAACGATGAGGCTAATTCACATTATTATGCCATCATTGAGCAGATGACAGAAGGAAATATGTGGTTGAATGACACCGTAGGGGTTATTCCTAAAAATGCTTGGGCGATTGATCCATTTGGTTACTCACCTACCATGGCATATCTTCTCCGCCGTATGGGTTTTGAAAATATGCTTATTCAGAGGACTCATTATGAGCTGAAGAAGGAACTTGCACTGCATAAAAATTTGGAGTATATATGGCGGCAGAGCTGGGATGTGGATGAAACTACTGATATTTTTGTCCACATGATGCCCTTTTATTCTTATGATATTCCACATACTTGTGGTCCAGAGCCTGCTATTTGTTGTCAGTTCGACTTTGCTCGAATGCGTGGCTTCATGTATGAACTCTGTCCGTGGGGAGACCATCCAGTAGAGACAAACCAGGAAAATGTTCAGGAGCGGGCACTAATACTACTAGATCAATATAGAAAGAAATCAACACTATACAGGACAAATACACTTCTTATTCCTCTTGGTGATGATTTCCGCTACATAAGCATTGATGAAGCTGAAGCTCAGTTTAGGAATTATCAGATGTTGTTTGATTATATAAATTCTAATCCGGGTTTAAATACAGAGGCCAAGTTTGGAACTCTAGAAGATTACTTCCAGACCCTTCGTGAGGAGGCTGAAAGAATAAATCACTCACTACCTGGTGAGATTGGTTCCGGTCAGGTTGGGGGTTTTCCTTCTTTGTCAGGTGACTTCTTTACTTATGCTGATAGGCAACAGGACTACTGGAGTGGCTATTATGTTTCGAGGCCTTTTTTCAAGGCTGTTGATCGAGTACTAGAGCAAACACTTCGTACCACAGATATGATGATGGCTTTCCTGCTTGGGTACTGTCAGAGAGCACAATGTGAAAAATTGCCCATGGGGTTCTCCTACAAGTTGGCCGCTGCTAGGAGGAACTTAGCTCTTTTTCAGCATCATGATGGTGTAACTGGTACTGCTAAAGATCATGTGGTCCTGGACTATGGGACTCGGATGCACACTTCTTTGCAGGACTTGCAGATTTTCATGTCTAAAGCTATTGAAGTACTGCTTGGAATACGCCATGAGAAAAATGACAATAACCCTTCTCAGTTTGAGCCAGAACAGGTGAGATCTAAATATGATGTTCAGCCAGTTCATAGAGCAATCATGGCTCGTGAGGGAACTAAACAGTCAGTGGTGTTTTTTAATCCTCTGGGGCAGACAAGAGAAGAGGTTGTGATGCTTATTGTTAACCGCCCAGATGTAACTGTTCTCTACTCAAACTGGACATGCGTTCAAAGCCAAATATCCCCTGAATTGCAGCATGATAAAAGCAAAATTTTCACCGGAAGGCATCGTGTGTACTGGAAGGCTTCTGTTCCTGCTCTGGGCTTGCAAACATATTACATTGCTAATGGGTTTGTTGGATGTGAAAAGGCCAAACCAGCAAAACTAAGATTCTTCTCAAAGTCTATGTCTATATCTTGCCCCACTCCATATGCTTGCTCAAAAGCAGAAGTTGATGTGGCTGAAATCCAGAACAGGCATCAAATACTCACCTTTGATGTCAATCATGGTTTATTGCAGAAAATAAGCTATAAAAATGGTTCCCAAAATGTTGTGGGTGAAGAAATAGCTATGTACTCTAGCTGGGGAAGTGGAGCCTACTTATTTAAACCCAATGGTGATGCCCAGCCTATCACAGAAGCAGGTGGGCAGATGGTGATCTCTGAGGGTCCTTTGGTGCAAGAAGTATATTCTTATCCAAAGACAGCATGGGAGAAGAGCCCCATTTCTCATAGCACCCGTATCTACAATGGAGAGAATACTGTACAGGAGTTTCTTATTGAGAAGGAGTATCATGTTGAGCTTCTCAGCCAGGACTTCAATGACATGGAGTTGATAGTTAGATACAAAACAGATATTGATAACAAAAGAATATTTTTTTCTGATTTAAATGGCTTTCAGATGAGCCGGAGAGAAACCTATGATAAAATCCCAACTCAGGGCAATTATTACCCTATGCCTTCTCTTGCGTTCATGCAAGGATCCAATGGCCAGAGGTTTTCAGTTCATTCTAGGCAGTCATTGGGTGTGGCCAGCCTTAAAAATGGATGGTTGGAGATTATGCTGGACCGTCGTTTGGTAAAAGATGATGGACGAGGTCTTGGACAAGGAGTGATGGATAACCGTGCAATGAATGTAGTCTTCCACATTGTTGTGGAGTCTAACATTTCAGCCACATCAAACCCAGTTTCCAACCCATTGCCCTTAAGCCCCTCTCTTCTTTCTCATCGTGTCAATGCTCACCTGAACTATCCATTACATGCGTTCATTGCCAAGAAGCCAGAGGAGTTATCAGTGCAGCCACCCCAAAGATTTTTCTCCCCTTTAGCTGCTCCCTTACCTTGTGATCTGCATATTGTAAGTTTTAAGGTTCCCCAACCTTTAAAATACTCACAGCAGCCTCTCGAAGATTCTAGGTTTGTCCTAATTTTACAGAGACAGAATTGGGACTCTTCATATTGTCGGAGGGGAAGATCAGGGTGCACTAGATTTGCTGATGAGACGGTGAATCTGTTTTACATGTTTAAGGAGCTTTCAGTATTGAATGTAAGAGCCACTTCCTTAAATCTTTTGCATGAAGACACAGACATGCTTGGGTATACTGAGCAGTTTGGAGATGTTGCTCAAGATGGACACGTTCTCATCTCTCCAATGGAAGTACAGGCTTACAAGTTAGAATTGCGGCCTCACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0004572 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006486 GO:0006487 GO:0006491 GO:0006517 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009628 GO:0009651 GO:0009987 GO:0012505 GO:0015923 GO:0015924 GO:0016020 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0034645 GO:0036211 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0070085 GO:0071704 GO:0097708 GO:0098588 GO:0098791 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 map00510 map00513 map01100

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

1164

Amino Acids

133.51

Weight (kDa)

6.92

Isoelectric Point (pI)

45.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14950
fragaria_vesca	FvH4_6g49910 FvH4_6g49910
malus_domestica	MD09G1040900.v1.1 MD17G1042200.v1.1
prunus_persica	Prupe.3G276800_v2.0.a1
pyrus_communis	pycom111g03190 pycom17g03770
rosa_chinensis	RchiOBHm_Chr2g0170081
rosa_laevigata	RLG00000021920
rosa_multiflora	Rmu_co8321257.1_g000001 Rmu_sc0013078.1_g000007 Rmu_sc0013453.1_g000004
rosa_roxburghii	Rroxscaffold_2G00081600
rosa_rugosa	Rorug02G0545500 Rorug02G0545600.1
rosa_samantha	Rh2AG617700 Rh2BG629200 Rh2CG598600 Rh2DG641000
rosa_wichuraiana	Rw2G051140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2429
AasI	GACNNNNNNGTC	1 cut(s)	551
Acc36I	ACCTGC	1 cut(s)	2429
AccB1I	GGYRCC	1 cut(s)	466
AccBSI	CCGCTC	1 cut(s)	1153
AccI	GTMKAC	3 cut(s)	336, 555, 3395
AccII	CGCG	1 cut(s)	320
AclWI	GGATC	4 cut(s)	479, 815, 2772, 2785
AcoI	YGGCCR	4 cut(s)	294, 1647, 2785, 2826
AcsI	RAATTY	3 cut(s)	934, 1306, 2067
AcuI	CTGAAG	2 cut(s)	929, 1284
AcyI	GRCGYC	1 cut(s)	315
AdeI	CACNNNGTG	1 cut(s)	1613
AfiI	CCNNNNNNNGG	9 cut(s)	324, 646, 865, 1375, 1656, 2117, 2734, 2735, 2872
AflII	CTTAAG	1 cut(s)	3001
AflIII	ACRYGT	2 cut(s)	3315, 3430
AgsI	TTSAA	9 cut(s)	232, 454, 778, 875, 1525, 1790, 2027, 2617, 3340
AjnI	CCWGG	6 cut(s)	395, 487, 1134, 1405, 1722, 2607
AjuI	GAANNNNNNNTTGG	2 cut(s)	1782, 1814
Alw21I	GWGCWC	2 cut(s)	1609, 3281
Alw26I	GTCTC	5 cut(s)	117, 1107, 1121, 3226, 3290
Alw44I	GTGCAC	1 cut(s)	3277
AlwI	GGATC	4 cut(s)	479, 815, 2772, 2785
AlwNI	CAGNNNCTG	1 cut(s)	1046
ApaI	GGGCCC	1 cut(s)	396
ApaLI	GTGCAC	1 cut(s)	3277
ApeKI	GCWGC	6 cut(s)	24, 1652, 2050, 3094, 3125, 3193
ApoI	RAATTY	3 cut(s)	934, 1306, 2067
ArsI	GACNNNNNNTTYG	4 cut(s)	116, 148, 2189, 2221
Asp700I	GAANNNNTTC	1 cut(s)	1143
AspLEI	GCGC	1 cut(s)	582
AspS9I	GGNCC	8 cut(s)	45, 327, 392, 393, 1037, 1720, 2465, 2863
AsuC2I	CCSGG	3 cut(s)	35, 577, 1317
AsuII	TTCGAA	1 cut(s)	566
AvaII	GGWCC	4 cut(s)	1037, 1720, 2465, 2863
BaeGI	GKGCMC	4 cut(s)	396, 471, 1159, 3281
BalI	TGGCCA	2 cut(s)	2787, 2828
BamHI	GGATCC	1 cut(s)	2777
BanI	GGYRCC	1 cut(s)	466
BanII	GRGCYC	2 cut(s)	396, 2519
BauI	CACGAG	1 cut(s)	1902
BbsI	GAAGAC	2 cut(s)	2929, 3381
Bbv12I	GWGCWC	2 cut(s)	1609, 3281
BbvI	GCAGC	6 cut(s)	36, 1639, 2062, 3106, 3112, 3205
BceAI	ACGGC	2 cut(s)	217, 846
BcgI	CGANNNNNNTGC	2 cut(s)	1538, 1572
BciT130I	CCWGG	6 cut(s)	397, 489, 1136, 1407, 1724, 2609
BciVI	GTATCC	1 cut(s)	565
BcnI	CCSGG	3 cut(s)	35, 577, 1317
BcoDI	GTCTC	5 cut(s)	117, 1107, 1121, 3226, 3290
BfaI	CTAG	8 cut(s)	1169, 1349, 1544, 1656, 2376, 2808, 3210, 3282
BfrI	CTTAAG	1 cut(s)	3001
BfuAI	ACCTGC	1 cut(s)	2429
BfuI	GTATCC	1 cut(s)	565
BglI	GCCNNNNNGGC	1 cut(s)	106
BglII	AGATCT	1 cut(s)	1859
BmcAI	AGTACT	3 cut(s)	515, 1542, 1794
Bme1390I	CCNGG	9 cut(s)	35, 397, 489, 577, 1136, 1317, 1407, 1724, 2609
Bme18I	GGWCC	4 cut(s)	1037, 1720, 2465, 2863
BmgT120I	GGNCC	8 cut(s)	45, 327, 392, 393, 1037, 1720, 2465, 2863
BmiI	GGNNCC	9 cut(s)	328, 394, 468, 1420, 2338, 2392, 2466, 2779, 3168
BmrFI	CCNGG	9 cut(s)	35, 397, 489, 577, 1136, 1317, 1407, 1724, 2609
BmrI	ACTGGG	1 cut(s)	2975
BmsI	GCATC	7 cut(s)	990, 1690, 1731, 1959, 2092, 2284, 2407
BmuI	ACTGGG	1 cut(s)	2975
BpiI	GAAGAC	2 cut(s)	2929, 3381
BplI	GAGNNNNNCTC	2 cut(s)	425, 457
BpmI	CTGGAG	1 cut(s)	1513
Bpu14I	TTCGAA	1 cut(s)	566
BpuEI	CTTGAG	1 cut(s)	3405
BpuMI	CCSGG	3 cut(s)	35, 577, 1317
BsaBI	GATNNNNATC	2 cut(s)	2298, 2453
BsaHI	GRCGYC	1 cut(s)	315
BsaI	GGTCTC	1 cut(s)	1107
BsaJI	CCNNGG	6 cut(s)	34, 348, 395, 843, 1106, 1626
BsaWI	WCCGGW	2 cut(s)	1421, 2075
BsaXI	ACNNNNNCTCC	2 cut(s)	403, 433
Bsc4I	CCNNNNNNNGG	9 cut(s)	324, 646, 865, 1375, 1656, 2117, 2734, 2735, 2872
Bse118I	RCCGGY	2 cut(s)	105, 296
Bse1I	ACTGG	9 cut(s)	287, 546, 1121, 1496, 1702, 1880, 2018, 2099, 2981
Bse3DI	GCAATG	4 cut(s)	2136, 2931, 2993, 3063
Bse8I	GATNNNNATC	2 cut(s)	2298, 2453
BseBI	CCWGG	6 cut(s)	397, 489, 1136, 1407, 1724, 2609
BseDI	CCNNGG	6 cut(s)	34, 348, 395, 843, 1106, 1626
BseGI	GGATG	8 cut(s)	189, 385, 970, 976, 1117, 1746, 2162, 2849
BseJI	GATNNNNATC	2 cut(s)	2298, 2453
BseLI	CCNNNNNNNGG	9 cut(s)	324, 646, 865, 1375, 1656, 2117, 2734, 2735, 2872
BseMI	GCAATG	4 cut(s)	2136, 2931, 2993, 3063
BseMII	CTCAG	7 cut(s)	435, 1283, 1850, 2451, 2617, 2747, 3390
BseNI	ACTGG	9 cut(s)	287, 546, 1121, 1496, 1702, 1880, 2018, 2099, 2981
BseRI	GAGGAG	6 cut(s)	47, 55, 211, 622, 1391, 3095
BseSI	GKGCMC	4 cut(s)	396, 471, 1159, 3281
BseX3I	CGGCCG	1 cut(s)	294
BseXI	GCAGC	6 cut(s)	36, 1639, 2062, 3106, 3112, 3205
BseYI	CCCAGC	5 cut(s)	209, 702, 960, 2379, 2421
BsgI	GTGCAG	1 cut(s)	3113
Bsh1236I	CGCG	1 cut(s)	320
Bsh1285I	CGRYCG	1 cut(s)	297
BshNI	GGYRCC	1 cut(s)	466
BsiEI	CGRYCG	1 cut(s)	297
BsiHKAI	GWGCWC	2 cut(s)	1609, 3281
BsiSI	CCGG	8 cut(s)	34, 106, 297, 577, 1316, 1422, 2076, 2704
BslFI	GGGAC	5 cut(s)	443, 452, 641, 1747, 3257
BslI	CCNNNNNNNGG	9 cut(s)	324, 646, 865, 1375, 1656, 2117, 2734, 2735, 2872
BsmAI	GTCTC	5 cut(s)	117, 1107, 1121, 3226, 3290
BsmBI	CGTCTC	1 cut(s)	3290
BsmFI	GGGAC	5 cut(s)	443, 452, 641, 1747, 3257
BsmI	GAATGC	1 cut(s)	1083
Bso31I	GGTCTC	1 cut(s)	1107
Bsp119I	TTCGAA	1 cut(s)	566
Bsp120I	GGGCCC	1 cut(s)	392
Bsp1286I	GDGCHC	6 cut(s)	396, 471, 1159, 1609, 2519, 3281
Bsp1407I	TGTACA	1 cut(s)	2560
Bsp19I	CCATGG	2 cut(s)	843, 1626
BspCNI	CTCAG	7 cut(s)	436, 1282, 1849, 2452, 2616, 2746, 3391
BspFNI	CGCG	1 cut(s)	320
BspHI	TCATGA	1 cut(s)	1684
BspLI	GGNNCC	9 cut(s)	328, 394, 468, 1420, 2338, 2392, 2466, 2779, 3168
BspMI	ACCTGC	1 cut(s)	2429
BspPI	GGATC	4 cut(s)	479, 815, 2772, 2785
BspQI	GCTCTTC	2 cut(s)	176, 2507
BspT104I	TTCGAA	1 cut(s)	566
BspT107I	GGYRCC	1 cut(s)	466
BspTI	CTTAAG	1 cut(s)	3001
BspTNI	GGTCTC	1 cut(s)	1107
BsrBI	CCGCTC	1 cut(s)	1153
BsrDI	GCAATG	4 cut(s)	2136, 2931, 2993, 3063
BsrFI	RCCGGY	2 cut(s)	105, 296
BsrGI	TGTACA	1 cut(s)	2560
BsrI	ACTGG	9 cut(s)	287, 546, 1121, 1496, 1702, 1880, 2018, 2099, 2981
BssAI	RCCGGY	2 cut(s)	105, 296
BssECI	CCNNGG	6 cut(s)	34, 348, 395, 843, 1106, 1626
BssNAI	GTATAC	1 cut(s)	3396
BssNI	GRCGYC	1 cut(s)	315
BssSI	CACGAG	1 cut(s)	1902
BssT1I	CCWWGG	3 cut(s)	348, 843, 1626
Bst1107I	GTATAC	1 cut(s)	3396
Bst2BI	CACGAG	1 cut(s)	1902
Bst2UI	CCWGG	6 cut(s)	397, 489, 1136, 1407, 1724, 2609
Bst6I	CTCTTC	8 cut(s)	73, 176, 504, 591, 1953, 2507, 3018, 3253
BstACI	GRCGYC	1 cut(s)	315
BstAFI	CTTAAG	1 cut(s)	3001
BstAPI	GCANNNNNTGC	1 cut(s)	1762
BstAUI	TGTACA	1 cut(s)	2560
BstBI	TTCGAA	1 cut(s)	566
BstC8I	GCNNGC	7 cut(s)	107, 298, 1047, 1155, 2123, 2233, 2830
BstDEI	CTNAG	9 cut(s)	444, 1269, 1666, 1836, 2183, 2460, 2603, 2733, 3399
BstDSI	CCRYGG	3 cut(s)	843, 1106, 1626
BstENI	CCTNNNNNAGG	1 cut(s)	1373
BstF5I	GGATG	8 cut(s)	189, 385, 970, 976, 1117, 1746, 2162, 2849
BstFNI	CGCG	1 cut(s)	320
BstHHI	GCGC	1 cut(s)	582
BstMAI	GTCTC	5 cut(s)	117, 1107, 1121, 3226, 3290
BstMCI	CGRYCG	1 cut(s)	297
BstNI	CCWGG	6 cut(s)	397, 489, 1136, 1407, 1724, 2609
BstNSI	RCATGY	4 cut(s)	2022, 3059, 3319, 3388
BstSCI	CCNGG	9 cut(s)	33, 395, 487, 575, 1134, 1315, 1405, 1722, 2607
BstSLI	GKGCMC	4 cut(s)	396, 471, 1159, 3281
BstUI	CGCG	1 cut(s)	320
BstV1I	GCAGC	6 cut(s)	36, 1639, 2062, 3106, 3112, 3205
BstV2I	GAAGAC	2 cut(s)	2929, 3381
BstX2I	RGATCY	2 cut(s)	1859, 2777
BstYI	RGATCY	2 cut(s)	1859, 2777
BstZ17I	GTATAC	1 cut(s)	3396
BstZI	CGGCCG	1 cut(s)	294
BsuI	GTATCC	1 cut(s)	565
BtgI	CCRYGG	3 cut(s)	843, 1106, 1626
BtgZI	GCGATG	1 cut(s)	335
BtsCI	GGATG	8 cut(s)	189, 385, 970, 976, 1117, 1746, 2162, 2849
BtsI	GCAGTG	1 cut(s)	923
BtsIMutI	CAGTG	4 cut(s)	501, 923, 1929, 3096
BveI	ACCTGC	1 cut(s)	2429
Cac8I	GCNNGC	7 cut(s)	107, 298, 1047, 1155, 2123, 2233, 2830
CaiI	CAGNNNCTG	1 cut(s)	1046
CciI	TCATGA	1 cut(s)	1684
CfoI	GCGC	1 cut(s)	582
Cfr10I	RCCGGY	2 cut(s)	105, 296
Cfr13I	GGNCC	8 cut(s)	45, 327, 392, 393, 1037, 1720, 2465, 2863
CseI	GACGC	1 cut(s)	323
CsiI	ACCWGGT	1 cut(s)	1405
DdeI	CTNAG	9 cut(s)	444, 1269, 1666, 1836, 2183, 2460, 2603, 2733, 3399
DraI	TTTAAA	4 cut(s)	1323, 2404, 2685, 3180
DraIII	CACNNNGTG	1 cut(s)	1613
DrdI	GACNNNNNNGTC	1 cut(s)	551
DseDI	GACNNNNNNGTC	1 cut(s)	551
EaeI	YGGCCR	4 cut(s)	294, 1647, 2785, 2826
EagI	CGGCCG	1 cut(s)	294
Eam1104I	CTCTTC	8 cut(s)	73, 176, 504, 591, 1953, 2507, 3018, 3253
EarI	CTCTTC	8 cut(s)	73, 176, 504, 591, 1953, 2507, 3018, 3253
EciI	GGCGGA	1 cut(s)	848
EclXI	CGGCCG	1 cut(s)	294
Eco130I	CCWWGG	3 cut(s)	348, 843, 1626
Eco147I	AGGCCT	1 cut(s)	1516
Eco24I	GRGCYC	2 cut(s)	396, 2519
Eco31I	GGTCTC	1 cut(s)	1107
Eco47I	GGWCC	4 cut(s)	1037, 1720, 2465, 2863
Eco52I	CGGCCG	1 cut(s)	294
Eco57I	CTGAAG	2 cut(s)	929, 1284
EcoNI	CCTNNNNNAGG	1 cut(s)	1373
EcoO109I	RGGNCCY	2 cut(s)	393, 2465
EcoRII	CCWGG	6 cut(s)	395, 487, 1134, 1405, 1722, 2607
EcoT14I	CCWWGG	3 cut(s)	348, 843, 1626
EcoT38I	GRGCYC	2 cut(s)	396, 2519
ErhI	CCWWGG	3 cut(s)	348, 843, 1626
Esp3I	CGTCTC	1 cut(s)	3290
FalI	AAGNNNNNCTT	4 cut(s)	1782, 1814, 3337, 3369
FaqI	GGGAC	5 cut(s)	443, 452, 641, 1747, 3257
FauI	CCCGC	3 cut(s)	38, 110, 1146
FauNDI	CATATG	1 cut(s)	2227
FblI	GTMKAC	3 cut(s)	336, 555, 3395
FokI	GGATG	8 cut(s)	176, 392, 977, 983, 1104, 1753, 2169, 2856
FriOI	GRGCYC	2 cut(s)	396, 2519
FspBI	CTAG	8 cut(s)	1169, 1349, 1544, 1656, 2376, 2808, 3210, 3282
GlaI	GCGC	1 cut(s)	581
GsaI	CCCAGC	5 cut(s)	213, 706, 964, 2383, 2425
GsuI	CTGGAG	1 cut(s)	1513
HapII	CCGG	8 cut(s)	34, 106, 297, 577, 1316, 1422, 2076, 2704
HgaI	GACGC	1 cut(s)	323
HhaI	GCGC	1 cut(s)	582
Hin1I	GRCGYC	1 cut(s)	315
Hin6I	GCGC	1 cut(s)	580
HinP1I	GCGC	1 cut(s)	580
HincII	GTYRAC	3 cut(s)	337, 556, 1981
HindII	GTYRAC	3 cut(s)	337, 556, 1981
HpaI	GTTAAC	1 cut(s)	1981
HpaII	CCGG	8 cut(s)	34, 106, 297, 577, 1316, 1422, 2076, 2704
Hpy166II	GTNNAC	8 cut(s)	337, 385, 556, 994, 1981, 2092, 3279, 3396
Hpy8I	GTNNAC	8 cut(s)	337, 385, 556, 994, 1981, 2092, 3279, 3396
Hpy99I	CGWCG	5 cut(s)	16, 188, 317, 338, 2871
HpyCH4IV	ACGT	1 cut(s)	3432
HpyF3I	CTNAG	9 cut(s)	444, 1269, 1666, 1836, 2183, 2460, 2603, 2733, 3399
HpySE526I	ACGT	1 cut(s)	3432
Hsp92I	GRCGYC	1 cut(s)	315
HspAI	GCGC	1 cut(s)	580
KroI	GCCGGC	2 cut(s)	105, 296
KroNI	GCCGGC	2 cut(s)	107, 298
KspAI	GTTAAC	1 cut(s)	1981
LguI	GCTCTTC	2 cut(s)	176, 2507
LmnI	GCTCC	5 cut(s)	352, 1150, 2390, 3133, 3325
Lsp1109I	GCAGC	6 cut(s)	36, 1639, 2062, 3106, 3112, 3205
LweI	GCATC	7 cut(s)	990, 1690, 1731, 1959, 2092, 2284, 2407
MabI	ACCWGGT	1 cut(s)	1405
MaeI	CTAG	8 cut(s)	1169, 1349, 1544, 1656, 2376, 2808, 3210, 3282
MaeII	ACGT	1 cut(s)	3432
MaeIII	GTNAC	6 cut(s)	197, 419, 830, 1454, 1693, 1993
MbiI	CCGCTC	1 cut(s)	1153
MflI	RGATCY	2 cut(s)	1859, 2777
MhlI	GDGCHC	6 cut(s)	396, 471, 1159, 1609, 2519, 3281
MlsI	TGGCCA	2 cut(s)	2787, 2828
MluNI	TGGCCA	2 cut(s)	2787, 2828
MlyI	GAGTC	6 cut(s)	434, 623, 889, 1729, 2963, 3239
MmeI	TCCRAC	6 cut(s)	96, 673, 2134, 2829, 3012, 3239
Mox20I	TGGCCA	2 cut(s)	2787, 2828
MreI	CGCCGGCG	1 cut(s)	105
MroNI	GCCGGC	2 cut(s)	105, 296
MroXI	GAANNNNTTC	1 cut(s)	1143
MscI	TGGCCA	2 cut(s)	2787, 2828
MslI	CAYNNNNRTG	7 cut(s)	735, 1032, 1568, 1686, 1689, 2948, 3383
Msp20I	TGGCCA	2 cut(s)	2787, 2828
MspA1I	CMGCKG	2 cut(s)	682, 1652
MspCI	CTTAAG	1 cut(s)	3001
MspI	CCGG	8 cut(s)	34, 106, 297, 577, 1316, 1422, 2076, 2704
MspR9I	CCNGG	9 cut(s)	35, 397, 489, 577, 1136, 1317, 1407, 1724, 2609
Mva1269I	GAATGC	1 cut(s)	1083
MvaI	CCWGG	6 cut(s)	397, 489, 1136, 1407, 1724, 2609
MvnI	CGCG	1 cut(s)	320
NaeI	GCCGGC	2 cut(s)	107, 298
NciI	CCSGG	3 cut(s)	35, 577, 1317
NcoI	CCATGG	2 cut(s)	843, 1626
NdeI	CATATG	1 cut(s)	2227
NgoMIV	GCCGGC	2 cut(s)	105, 296
NlaIV	GGNNCC	9 cut(s)	328, 394, 468, 1420, 2338, 2392, 2466, 2779, 3168
NmuCI	GTSAC	1 cut(s)	1454
NspI	RCATGY	4 cut(s)	2022, 3059, 3319, 3388
NspV	TTCGAA	1 cut(s)	566
PagI	TCATGA	1 cut(s)	1684
PaqCI	CACCTGC	1 cut(s)	2429
PceI	AGGCCT	1 cut(s)	1516
PciI	ACATGT	1 cut(s)	3315
PciSI	GCTCTTC	2 cut(s)	176, 2507
PctI	GAATGC	1 cut(s)	1083
PdiI	GCCGGC	2 cut(s)	107, 298
PdmI	GAANNNNTTC	1 cut(s)	1143
PfeI	GAWTC	5 cut(s)	302, 650, 2187, 3206, 3304
PflFI	GACNNNGTC	1 cut(s)	2892
PfoI	TCCNGGA	1 cut(s)	1722
PleI	GAGTC	6 cut(s)	434, 623, 889, 1729, 2962, 3239
PpsI	GAGTC	6 cut(s)	434, 623, 889, 1729, 2962, 3239
PpuMI	RGGWCCY	1 cut(s)	2465
PscI	ACATGT	1 cut(s)	3315
Psp5II	RGGWCCY	1 cut(s)	2465
Psp6I	CCWGG	6 cut(s)	395, 487, 1134, 1405, 1722, 2607
PspFI	CCCAGC	5 cut(s)	209, 702, 960, 2379, 2421
PspGI	CCWGG	6 cut(s)	395, 487, 1134, 1405, 1722, 2607
PspN4I	GGNNCC	9 cut(s)	328, 394, 468, 1420, 2338, 2392, 2466, 2779, 3168
PspOMI	GGGCCC	1 cut(s)	392
PspPI	GGNCC	8 cut(s)	45, 327, 392, 393, 1037, 1720, 2465, 2863
PspPPI	RGGWCCY	1 cut(s)	2465
PstNI	CAGNNNCTG	1 cut(s)	1046
PsuI	RGATCY	2 cut(s)	1859, 2777
PsyI	GACNNNGTC	1 cut(s)	2892
PvuII	CAGCTG	1 cut(s)	682
RseI	CAYNNNNRTG	7 cut(s)	735, 1032, 1568, 1686, 1689, 2948, 3383
SalI	GTCGAC	2 cut(s)	335, 554
SapI	GCTCTTC	2 cut(s)	176, 2507
Sau96I	GGNCC	8 cut(s)	45, 327, 392, 393, 1037, 1720, 2465, 2863
ScaI	AGTACT	3 cut(s)	515, 1542, 1794
SchI	GAGTC	6 cut(s)	434, 623, 889, 1729, 2963, 3239
ScrFI	CCNGG	9 cut(s)	35, 397, 489, 577, 1136, 1317, 1407, 1724, 2609
SduI	GDGCHC	6 cut(s)	396, 471, 1159, 1609, 2519, 3281
SexAI	ACCWGGT	1 cut(s)	1405
SfaNI	GCATC	7 cut(s)	990, 1690, 1731, 1959, 2092, 2284, 2407
SfuI	TTCGAA	1 cut(s)	566
SgrAI	CRCCGGYG	1 cut(s)	105
SinI	GGWCC	4 cut(s)	1037, 1720, 2465, 2863
SmiI	ATTTAAAT	1 cut(s)	2685
SmiMI	CAYNNNNRTG	7 cut(s)	735, 1032, 1568, 1686, 1689, 2948, 3383
SmlI	CTYRAG	2 cut(s)	3001, 3420
SmoI	CTYRAG	2 cut(s)	3001, 3420
SseBI	AGGCCT	1 cut(s)	1516
SspI	AATATT	1 cut(s)	2670
SspMI	CTAG	8 cut(s)	1169, 1349, 1544, 1656, 2376, 2808, 3210, 3282
StuI	AGGCCT	1 cut(s)	1516
StyD4I	CCNGG	9 cut(s)	33, 395, 487, 575, 1134, 1315, 1405, 1722, 2607
StyI	CCWWGG	3 cut(s)	348, 843, 1626
SwaI	ATTTAAAT	1 cut(s)	2685
TaiI	ACGT	1 cut(s)	3435
TatI	WGTACW	7 cut(s)	513, 1540, 1792, 2091, 2370, 2560, 3454
TauI	GCSGC	5 cut(s)	312, 320, 955, 1652, 3481
TfiI	GAWTC	5 cut(s)	302, 650, 2187, 3206, 3304
TscAI	CASTG	4 cut(s)	508, 930, 1929, 3096
TseFI	GTSAC	1 cut(s)	1454
TseI	GCWGC	6 cut(s)	24, 1652, 2050, 3094, 3125, 3193
Tsp45I	GTSAC	1 cut(s)	1454
TspGWI	ACGGA	2 cut(s)	185, 1095
TspRI	CASTG	4 cut(s)	508, 930, 1929, 3096
Tth111I	GACNNNGTC	1 cut(s)	2892
Vha464I	CTTAAG	1 cut(s)	3001
VneI	GTGCAC	1 cut(s)	3277
VpaK11BI	GGWCC	4 cut(s)	1037, 1720, 2465, 2863
XagI	CCTNNNNNAGG	1 cut(s)	1373
XapI	RAATTY	3 cut(s)	934, 1306, 2067
XbaI	TCTAGA	1 cut(s)	1348
XceI	RCATGY	4 cut(s)	2022, 3059, 3319, 3388
XcmI	CCANNNNNNNNNTGG	2 cut(s)	538, 2502
XmiI	GTMKAC	3 cut(s)	336, 555, 3395
XmnI	GAANNNNTTC	1 cut(s)	1143
XspI	CTAG	8 cut(s)	1169, 1349, 1544, 1656, 2376, 2808, 3210, 3282
ZrmI	AGTACT	3 cut(s)	515, 1542, 1794

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.