Rorug02G0545500

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000679
Physical Location & Seq
Reverse (-)
67484360 .. 67488729
4370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0545500.1

Sequence Viewer

Length: 1743 bp
ATGACCATCTCGTCCTTCTTCATCAGAGCTTCAAGAGCTTTCCATGGATACCCTTTTGCTCCCCAGCTTCTACTGCTTGGCACTATCAGTGGTGGAGGTGTTGTGGCGTATGCAGAATCACAGTCAGATGTTGGCTCTCCTCTTATTGATTCTAATCAGAATGAGATTAAGAAAAAGAGAGTGGTGGTTCTTGGGACAGGATGGGCTGGTACTAGTTTCCTTAAGCATGTGGATGCTTCACATTATGATGTTCAGGTTGTATCACCTAGAAACTATTTTGCGTTCACCCCTTTGTTACCTAGTGTCACATGTGGAACGGTTGAAGCACGAAGCATAGTAGAACCAGTGCGTAATATTATAAAGAAGAGAAGTGGAGAGATCAAATATTATGAAGCAGAATGTATCAAGATTGATGCTGCAAATAAGAATGTTCACCTCCGGGCTAATACTGATAACCCATTGATAGGAACTCCTGATTTTTCCCTGGAATATGACTACTTGATCGTAGCTATAGGAGCACAAGTAAACACGTTTAACACCCCTGGGGTAAAGGAGAACTGTCATTTTCTGAAGGAAGTAGAAGATGCTCAGAAGATTCGTACCAGTGTTATAGATTGCTTTGAAACTGCTGTACTTCCAGGTCTTAGTGAAGAGGAGCGGAGGAGGAATCTTCATTTTGTAATTGTTGGAGGGGGTCCTACTGGGGTTGAATTTGCTGCAGAGCTGCATGATTATTTCCAAGAAGATTTAGTCAAGTTATATCCTATGGTTAAGGATCTTGTGAAAATAACATTAATCCAATCAGGAGATCATATCTTGAACATGTTTGATGAAAGAATTAGTAATTTTGCTGAGACCAAATTTCAAAGAGATGGTATTGATGTTCAAACAGGATGCCGGGTTGTCAGTGTTTCAGACAAGGAAATCAAAGTGAAAGTGAAATCAAAGGGAGAGGTCTGCTCTGTTCCACATGGATTGGTGGTGTGGTCTACCGGCGTTGGGACTCGTCCAGTTGTGAGAGACTTTATGGAACAAATTGGACAGGCTAATAGACGTGTTCTAGTAACTGATGAATGGTTGCGTGTAAAGGGTTGTGATGATGTGTATGCCATTGGTGATTGCGCTACAATTGATCAACGTAAAATCATGGAAGATATCGTGGCCATATTTGCAGCTGCGGACACAGACAACTCTGGTACCTTAACAGTTGCTGAATTCCGAGATGTAGTTGACGACATAATCATTAGGTATCCCCAAGTGGAAAATTATTTAAAAAGCAAGCATCTGCAAGATGTGACAGATCTATTGAAAGATTCCGAGGGGAATGATAGGAAGGAAGTGAATATTGAAGAATTTAAATTAGCCCTCTCTCTAGTGGATTCACAGAGGAAGAGTCTGCCTGCAACTGCACAGGTTGCTGCTCAGCAGGGTACATATCTTTCTAATTGCTTTAACCGGAGAGAGCAGTGTGAAGCAATTCCTGAAGGTCCTCGACGTTTTAGAGGTTCTGGACAACATTACTTTCTTCCCTTCAGGTACAAGCATTTCGGGCAATTTGCTCCATTGGGGGGTGAGGAAGCAGCAGCAGAGCTGCCTGGGGACTGGGTTTCCACGGGTCACAGCACTCAATGGCTCTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGTACTAGGGTCCTAGTGGTATCTGATTGGACCAGAAAATTTATTTTTGGGAGAGATTCAAGCCGTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

580

Amino Acids

64.96

Weight (kDa)

6.06

Isoelectric Point (pI)

37.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_2 PF07992 60 - 388 2.4e-56 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox PF00070 225 - 313 6.1e-11 Pyridine nucleotide-disulphide oxidoreductase
NDH2_C PF22366 515 - 576 2.4e-16 NDH2 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 359
AasI GACNNNNNNGTC 1 cut(s) 10
Acc65I GGTACC 1 cut(s) 1196
AccB1I GGYRCC 1 cut(s) 1196
AccBSI CCGCTC 1 cut(s) 658
AccI GTMKAC 1 cut(s) 989
AciI CCGC 2 cut(s) 658, 1178
AclWI GGATC 1 cut(s) 783
AcoI YGGCCR 1 cut(s) 1161
AcsI RAATTY 5 cut(s) 710, 860, 1214, 1352, 1709
AcuI CTGAAG 3 cut(s) 590, 1503, 1516
AfaI GTAC 7 cut(s) 211, 601, 633, 1198, 1432, 1538, 1675
AfiI CCNNNNNNNGG 3 cut(s) 464, 999, 1568
AflII CTTAAG 1 cut(s) 221
AflIII ACRYGT 4 cut(s) 308, 528, 822, 1054
AhlI ACTAGT 1 cut(s) 212
AjiI CACGTC 1 cut(s) 1055
AjnI CCWGG 4 cut(s) 483, 541, 637, 1594
AluBI AGCT 8 cut(s) 29, 38, 67, 509, 724, 1175, 1591, 1668
AluI AGCT 8 cut(s) 29, 38, 67, 509, 724, 1175, 1591, 1668
Alw21I GWGCWC 1 cut(s) 520
Alw26I GTCTC 2 cut(s) 848, 1014
AlwI GGATC 1 cut(s) 783
AlwNI CAGNNNCTG 1 cut(s) 1211
AoxI GGCC 1 cut(s) 1161
ApeKI GCWGC 9 cut(s) 416, 716, 724, 1172, 1175, 1418, 1580, 1583, 1591
ApoI RAATTY 5 cut(s) 710, 860, 1214, 1352, 1709
AseI ATTAAT 1 cut(s) 794
Asp700I GAANNNNTTC 1 cut(s) 1476
Asp718I GGTACC 1 cut(s) 1196
AspLEI GCGC 1 cut(s) 1124
AspS9I GGNCC 4 cut(s) 695, 1487, 1681, 1701
AsuC2I CCSGG 2 cut(s) 440, 899
AsuHPI GGTGA 5 cut(s) 255, 277, 425, 1127, 1583
AvaII GGWCC 4 cut(s) 695, 1487, 1681, 1701
BaeI ACNNNNGTAYC 2 cut(s) 1180, 1213
BalI TGGCCA 1 cut(s) 1163
BanI GGYRCC 1 cut(s) 1196
Bbv12I GWGCWC 1 cut(s) 520
BbvI GCAGC 9 cut(s) 403, 703, 711, 1162, 1184, 1405, 1578, 1592, 1595
BccI CCATC 3 cut(s) 14, 195, 866
BceAI ACGGC 1 cut(s) 1719
BciT130I CCWGG 4 cut(s) 485, 543, 639, 1596
BciVI GTATCC 2 cut(s) 41, 1260
BclI TGATCA 1 cut(s) 1132
BcnI CCSGG 2 cut(s) 440, 899
BcoDI GTCTC 2 cut(s) 848, 1014
BcuI ACTAGT 1 cut(s) 212
BfaI CTAG 7 cut(s) 213, 267, 300, 1061, 1373, 1677, 1685
BfmI CTRYAG 2 cut(s) 510, 717
BfrI CTTAAG 1 cut(s) 221
BfuI GTATCC 2 cut(s) 41, 1260
BglII AGATCT 1 cut(s) 1300
BisI GCNGC 9 cut(s) 417, 717, 725, 1173, 1176, 1419, 1581, 1584, 1592
BlpI GCTNAGC 1 cut(s) 1422
BlsI GCNGC 9 cut(s) 418, 718, 726, 1174, 1177, 1420, 1582, 1585, 1593
Bme1390I CCNGG 6 cut(s) 440, 485, 543, 639, 899, 1596
Bme18I GGWCC 4 cut(s) 695, 1487, 1681, 1701
BmgBI CACGTC 1 cut(s) 1055
BmgT120I GGNCC 4 cut(s) 695, 1487, 1681, 1701
BmiI GGNNCC 3 cut(s) 696, 1198, 1682
BmrFI CCNGG 6 cut(s) 440, 485, 543, 639, 899, 1596
BmrI ACTGGG 2 cut(s) 711, 1612
BmsI GCATC 5 cut(s) 223, 403, 574, 884, 1291
BmuI ACTGGG 2 cut(s) 711, 1612
BplI GAGNNNNNCTC 2 cut(s) 944, 976
Bpu1102I GCTNAGC 1 cut(s) 1422
BpuMI CCSGG 2 cut(s) 440, 899
BsaBI GATNNNNATC 1 cut(s) 153
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 7 cut(s) 43, 483, 541, 542, 1317, 1595, 1611
BsaWI WCCGGW 1 cut(s) 1455
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 507, 537
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 999, 1568
Bse118I RCCGGY 1 cut(s) 992
Bse1I ACTGG 5 cut(s) 344, 603, 706, 1010, 1607
Bse8I GATNNNNATC 1 cut(s) 153
BseBI CCWGG 4 cut(s) 485, 543, 639, 1596
BseDI CCNNGG 7 cut(s) 43, 483, 541, 542, 1317, 1595, 1611
BseGI GGATG 3 cut(s) 206, 238, 899
BseJI GATNNNNATC 1 cut(s) 153
BseLI CCNNNNNNNGG 3 cut(s) 464, 999, 1568
BseMII CTCAG 3 cut(s) 602, 843, 1436
BseNI ACTGG 5 cut(s) 344, 603, 706, 1010, 1607
BseRI GAGGAG 3 cut(s) 129, 668, 676
BseXI GCAGC 9 cut(s) 403, 703, 711, 1162, 1184, 1405, 1578, 1592, 1595
BseYI CCCAGC 1 cut(s) 63
BsgI GTGCAG 1 cut(s) 1392
BshFI GGCC 1 cut(s) 1163
BshNI GGYRCC 1 cut(s) 1196
BsiHKAI GWGCWC 1 cut(s) 520
BsiSI CCGG 4 cut(s) 439, 898, 993, 1456
BslFI GGGAC 3 cut(s) 208, 1015, 1613
BslI CCNNNNNNNGG 3 cut(s) 464, 999, 1568
BsmAI GTCTC 2 cut(s) 848, 1014
BsmFI GGGAC 3 cut(s) 208, 1015, 1613
BsnI GGCC 1 cut(s) 1163
Bso31I GGTCTC 1 cut(s) 848
Bsp1286I GDGCHC 1 cut(s) 520
Bsp143I GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
Bsp1720I GCTNAGC 1 cut(s) 1422
Bsp19I CCATGG 1 cut(s) 43
BspACI CCGC 2 cut(s) 658, 1178
BspANI GGCC 1 cut(s) 1163
BspCNI CTCAG 3 cut(s) 601, 844, 1435
BspLI GGNNCC 3 cut(s) 696, 1198, 1682
BspMAI CTGCAG 1 cut(s) 721
BspPI GGATC 1 cut(s) 783
BspT107I GGYRCC 1 cut(s) 1196
BspTI CTTAAG 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 848
BsrBI CCGCTC 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 992
BsrI ACTGG 5 cut(s) 344, 603, 706, 1010, 1607
BssAI RCCGGY 1 cut(s) 992
BssECI CCNNGG 7 cut(s) 43, 483, 541, 542, 1317, 1595, 1611
BssMI GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
BssT1I CCWWGG 1 cut(s) 43
Bst2UI CCWGG 4 cut(s) 485, 543, 639, 1596
Bst4CI ACNGT 4 cut(s) 123, 319, 560, 1207
Bst6I CTCTTC 3 cut(s) 359, 645, 1385
BstAFI CTTAAG 1 cut(s) 221
BstAPI GCANNNNNTGC 1 cut(s) 1415
BstC8I GCNNGC 5 cut(s) 1280, 1401, 1654, 1658, 1670
BstDEI CTNAG 4 cut(s) 588, 644, 852, 1422
BstDSI CCRYGG 2 cut(s) 43, 1611
BstF5I GGATG 3 cut(s) 206, 238, 899
BstHHI GCGC 1 cut(s) 1124
BstKTI GATC 6 cut(s) 381, 504, 778, 811, 1135, 1303
BstMAI GTCTC 2 cut(s) 848, 1014
BstMBI GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
BstMWI GCNNNNNNNGC 6 cut(s) 35, 73, 515, 1169, 1415, 1549
BstNI CCWGG 4 cut(s) 485, 543, 639, 1596
BstNSI RCATGY 3 cut(s) 230, 312, 826
BstSCI CCNGG 6 cut(s) 438, 483, 541, 637, 897, 1594
BstSFI CTRYAG 2 cut(s) 510, 717
BstV1I GCAGC 9 cut(s) 403, 703, 711, 1162, 1184, 1405, 1578, 1592, 1595
BstX2I RGATCY 2 cut(s) 775, 1300
BstYI RGATCY 2 cut(s) 775, 1300
BsuI GTATCC 2 cut(s) 41, 1260
BsuRI GGCC 1 cut(s) 1163
BtgI CCRYGG 2 cut(s) 43, 1611
BtrI CACGTC 1 cut(s) 1055
BtsCI GGATG 3 cut(s) 206, 238, 899
BtsI GCAGTG 1 cut(s) 1472
BtsIMutI CAGTG 5 cut(s) 94, 351, 610, 913, 1472
Cac8I GCNNGC 5 cut(s) 1280, 1401, 1654, 1658, 1670
CaiI CAGNNNCTG 1 cut(s) 1211
CfoI GCGC 1 cut(s) 1124
Cfr10I RCCGGY 1 cut(s) 992
Cfr13I GGNCC 4 cut(s) 695, 1487, 1681, 1701
Csp6I GTAC 7 cut(s) 210, 600, 632, 1197, 1431, 1537, 1674
CspCI CAANNNNNGTGG 2 cut(s) 957, 992
CviAII CATG 7 cut(s) 44, 227, 309, 728, 823, 971, 1147
CviQI GTAC 7 cut(s) 210, 600, 632, 1197, 1431, 1537, 1674
DdeI CTNAG 4 cut(s) 588, 644, 852, 1422
DpnI GATC 6 cut(s) 380, 503, 777, 810, 1134, 1302
DpnII GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
DraI TTTAAA 2 cut(s) 1272, 1357
DrdI GACNNNNNNGTC 1 cut(s) 10
DseDI GACNNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 1 cut(s) 1161
Eam1104I CTCTTC 3 cut(s) 359, 645, 1385
EarI CTCTTC 3 cut(s) 359, 645, 1385
Eco130I CCWWGG 1 cut(s) 43
Eco31I GGTCTC 1 cut(s) 848
Eco32I GATATC 1 cut(s) 1156
Eco47I GGWCC 4 cut(s) 695, 1487, 1681, 1701
Eco57I CTGAAG 3 cut(s) 590, 1503, 1516
EcoO109I RGGNCCY 3 cut(s) 695, 1487, 1681
EcoRI GAATTC 1 cut(s) 1214
EcoRII CCWGG 4 cut(s) 483, 541, 637, 1594
EcoRV GATATC 1 cut(s) 1156
EcoT14I CCWWGG 1 cut(s) 43
ErhI CCWWGG 1 cut(s) 43
FaeI CATG 7 cut(s) 47, 230, 312, 731, 826, 974, 1150
FaqI GGGAC 3 cut(s) 208, 1015, 1613
FatI CATG 7 cut(s) 43, 226, 308, 727, 822, 970, 1146
FbaI TGATCA 1 cut(s) 1132
FblI GTMKAC 1 cut(s) 989
Fnu4HI GCNGC 9 cut(s) 417, 717, 725, 1173, 1176, 1419, 1581, 1584, 1592
FokI GGATG 3 cut(s) 213, 245, 906
Fsp4HI GCNGC 9 cut(s) 417, 717, 725, 1173, 1176, 1419, 1581, 1584, 1592
FspBI CTAG 7 cut(s) 213, 267, 300, 1061, 1373, 1677, 1685
GlaI GCGC 1 cut(s) 1123
GluI GCNGC 9 cut(s) 417, 717, 725, 1173, 1176, 1419, 1581, 1584, 1592
GsaI CCCAGC 1 cut(s) 67
HaeIII GGCC 1 cut(s) 1163
HapII CCGG 4 cut(s) 439, 898, 993, 1456
HhaI GCGC 1 cut(s) 1124
Hin1II CATG 7 cut(s) 47, 230, 312, 731, 826, 974, 1150
Hin6I GCGC 1 cut(s) 1122
HinP1I GCGC 1 cut(s) 1122
HincII GTYRAC 1 cut(s) 1231
HindII GTYRAC 1 cut(s) 1231
HinfI GANTC 9 cut(s) 116, 149, 595, 667, 1003, 1313, 1379, 1393, 1727
HpaII CCGG 4 cut(s) 439, 898, 993, 1456
HphI GGTGA 5 cut(s) 255, 277, 425, 1127, 1583
Hpy166II GTNNAC 5 cut(s) 285, 433, 526, 990, 1231
Hpy188I TCNGA 9 cut(s) 26, 127, 159, 570, 591, 916, 1220, 1318, 1696
Hpy188III TCNNGA 7 cut(s) 33, 406, 473, 804, 817, 1481, 1509
Hpy8I GTNNAC 5 cut(s) 285, 433, 526, 990, 1231
Hpy99I CGWCG 1 cut(s) 1497
HpyAV CCTTC 5 cut(s) 25, 565, 1327, 1478, 1540
HpyCH4III ACNGT 4 cut(s) 123, 319, 560, 1207
HpyCH4IV ACGT 4 cut(s) 530, 1054, 1138, 1495
HpyCH4V TGCA 9 cut(s) 113, 419, 719, 727, 1172, 1288, 1403, 1409, 1652
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 73, 515, 1169, 1415, 1549
HpyF3I CTNAG 4 cut(s) 588, 644, 852, 1422
HpySE526I ACGT 4 cut(s) 530, 1054, 1138, 1495
Hsp92II CATG 7 cut(s) 47, 230, 312, 731, 826, 974, 1150
HspAI GCGC 1 cut(s) 1122
KpnI GGTACC 1 cut(s) 1200
Ksp22I TGATCA 1 cut(s) 1132
Kzo9I GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
LmnI GCTCC 4 cut(s) 64, 515, 655, 1564
Lsp1109I GCAGC 9 cut(s) 403, 703, 711, 1162, 1184, 1405, 1578, 1592, 1595
LweI GCATC 5 cut(s) 223, 403, 574, 884, 1291
MaeI CTAG 7 cut(s) 213, 267, 300, 1061, 1373, 1677, 1685
MaeII ACGT 4 cut(s) 530, 1054, 1138, 1495
MaeIII GTNAC 5 cut(s) 294, 304, 1063, 1294, 1616
MalI GATC 6 cut(s) 380, 503, 777, 810, 1134, 1302
MbiI CCGCTC 1 cut(s) 658
MboI GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
MfeI CAATTG 1 cut(s) 1128
MflI RGATCY 2 cut(s) 775, 1300
MhlI GDGCHC 1 cut(s) 520
MlsI TGGCCA 1 cut(s) 1163
MluNI TGGCCA 1 cut(s) 1163
MlyI GAGTC 2 cut(s) 997, 1402
MmeI TCCRAC 1 cut(s) 667
Mox20I TGGCCA 1 cut(s) 1163
MroXI GAANNNNTTC 1 cut(s) 1476
MscI TGGCCA 1 cut(s) 1163
MslI CAYNNNNRTG 2 cut(s) 231, 246
Msp20I TGGCCA 1 cut(s) 1163
MspA1I CMGCKG 1 cut(s) 1175
MspCI CTTAAG 1 cut(s) 221
MspI CCGG 4 cut(s) 439, 898, 993, 1456
MspR9I CCNGG 6 cut(s) 440, 485, 543, 639, 899, 1596
MunI CAATTG 1 cut(s) 1128
MvaI CCWGG 4 cut(s) 485, 543, 639, 1596
MwoI GCNNNNNNNGC 6 cut(s) 35, 73, 515, 1169, 1415, 1549
NciI CCSGG 2 cut(s) 440, 899
NcoI CCATGG 1 cut(s) 43
NdeII GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
NlaIII CATG 7 cut(s) 47, 230, 312, 731, 826, 974, 1150
NlaIV GGNNCC 3 cut(s) 696, 1198, 1682
NmuCI GTSAC 3 cut(s) 304, 1294, 1616
NspI RCATGY 3 cut(s) 230, 312, 826
PasI CCCWGGG 1 cut(s) 542
PciI ACATGT 2 cut(s) 308, 822
PdmI GAANNNNTTC 1 cut(s) 1476
PfeI GAWTC 7 cut(s) 116, 149, 595, 667, 1313, 1379, 1727
PkrI GCNGC 9 cut(s) 418, 718, 726, 1174, 1177, 1420, 1582, 1585, 1593
PleI GAGTC 2 cut(s) 997, 1401
PpsI GAGTC 2 cut(s) 997, 1401
PpuMI RGGWCCY 3 cut(s) 695, 1487, 1681
PscI ACATGT 2 cut(s) 308, 822
PshBI ATTAAT 1 cut(s) 794
PsiI TTATAA 1 cut(s) 359
Psp5II RGGWCCY 3 cut(s) 695, 1487, 1681
Psp6I CCWGG 4 cut(s) 483, 541, 637, 1594
PspFI CCCAGC 1 cut(s) 63
PspGI CCWGG 4 cut(s) 483, 541, 637, 1594
PspN4I GGNNCC 3 cut(s) 696, 1198, 1682
PspPI GGNCC 4 cut(s) 695, 1487, 1681, 1701
PspPPI RGGWCCY 3 cut(s) 695, 1487, 1681
PstI CTGCAG 1 cut(s) 721
PstNI CAGNNNCTG 1 cut(s) 1211
PsuI RGATCY 2 cut(s) 775, 1300
PvuII CAGCTG 1 cut(s) 1175
RsaI GTAC 7 cut(s) 211, 601, 633, 1198, 1432, 1538, 1675
RsaNI GTAC 7 cut(s) 210, 600, 632, 1197, 1431, 1537, 1674
RseI CAYNNNNRTG 2 cut(s) 231, 246
SatI GCNGC 9 cut(s) 417, 717, 725, 1173, 1176, 1419, 1581, 1584, 1592
Sau3AI GATC 6 cut(s) 378, 501, 775, 808, 1132, 1300
Sau96I GGNCC 4 cut(s) 695, 1487, 1681, 1701
SchI GAGTC 2 cut(s) 997, 1402
ScrFI CCNGG 6 cut(s) 440, 485, 543, 639, 899, 1596
SduI GDGCHC 1 cut(s) 520
SfaNI GCATC 5 cut(s) 223, 403, 574, 884, 1291
SfcI CTRYAG 2 cut(s) 510, 717
SinI GGWCC 4 cut(s) 695, 1487, 1681, 1701
SmiI ATTTAAAT 1 cut(s) 1357
SmiMI CAYNNNNRTG 2 cut(s) 231, 246
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
SpeI ACTAGT 1 cut(s) 212
SsiI CCGC 2 cut(s) 658, 1178
SspI AATATT 3 cut(s) 355, 386, 1345
SspMI CTAG 7 cut(s) 213, 267, 300, 1061, 1373, 1677, 1685
StyD4I CCNGG 6 cut(s) 438, 483, 541, 637, 897, 1594
StyI CCWWGG 1 cut(s) 43
SwaI ATTTAAAT 1 cut(s) 1357
TaaI ACNGT 4 cut(s) 123, 319, 560, 1207
TaiI ACGT 4 cut(s) 533, 1057, 1141, 1498
TaqI TCGA 1 cut(s) 1492
TatI WGTACW 1 cut(s) 631
TfiI GAWTC 7 cut(s) 116, 149, 595, 667, 1313, 1379, 1727
TscAI CASTG 5 cut(s) 94, 351, 610, 913, 1472
TseFI GTSAC 3 cut(s) 304, 1294, 1616
TseI GCWGC 9 cut(s) 416, 716, 724, 1172, 1175, 1418, 1580, 1583, 1591
Tsp45I GTSAC 3 cut(s) 304, 1294, 1616
TspDTI ATGAA 5 cut(s) 10, 405, 662, 846, 1086
TspRI CASTG 5 cut(s) 94, 351, 610, 913, 1472
Vha464I CTTAAG 1 cut(s) 221
VpaK11BI GGWCC 4 cut(s) 695, 1487, 1681, 1701
VspI ATTAAT 1 cut(s) 794
XapI RAATTY 5 cut(s) 710, 860, 1214, 1352, 1709
XceI RCATGY 3 cut(s) 230, 312, 826
XmiI GTMKAC 1 cut(s) 989
XmnI GAANNNNTTC 1 cut(s) 1476
XspI CTAG 7 cut(s) 213, 267, 300, 1061, 1373, 1677, 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.