Rorug02G0534500

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000679
Physical Location & Seq
Reverse (-)
66366674 .. 66369846
3173 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0534500.1

Sequence Viewer

Length: 2418 bp
ATGGGCCGGTGGCTCTTGTGTTACGTTGTAACACTGCTCATATCTCACATCCTCTCATTCTGTACCTGCCAAGACAAAATAGTACCAGGACAGAATATCAGTGGTAATGTGACTTTGGTTTCTTCCCTTGAGACCTTTTCATTAGGCTTCTTCAATCCTGAAAATTCTACTAAATACTTCCTTGGTATACGATTCAACAAATTCCCAAATACTGCATCAGTATGGGTAGCTAATAGAGAATCTCCACTTGATTCTCCGGGTTTCTTTATGCTCAGCAGCGATGGAAATCTTGTGGTGTTGGATCAGACTAGAAAACTTGTCTGGTCAACTAATGCATCAGTATCTGCTTCTGCAATGAATCACACAACTGGATTACTAGAGGATACCGGAAACCTTGTTCTGAGCTTTGAAGAAGTCACTTTGTGGCAGAGCTTCGATCATCCCTGTGATACTATGTTGCCTGGCATTAAGATTAGCTTGAACAAAAAGACTGGCCAACAAAGGCGCCTTACATCCTGGGCTGCGCTTGATGATCCACAACCCGGAAAGTTCACCTTGGGCATAGATCCTAAAGTACCAATTCAGGCCTTTATCTGGAAGGAAACTACTCCAATAGCGAGAACTTCTCTGTACATTGGCAAGGGTACAAGAACAGAGTTTCAAAATCTAGGTGGAACCGCGATTTTCCTTTCATACAACTTTGATGTTGATGATGTTTATCTTGCTTTCAGTGTCTCGGATAGCTCAGTAAAATTGAGGGTCTGGTTGGATCCTACAGGGCTAATTAAACTGCAGTTCTGGCAGAATTCTAGTAAAACGTGGTTGGAACAAGGGAATTCACCGCTCGTTGATAACTGTAATTTTTATGCTTATTGCGGTCCCAATAGTGCCTGTCGTAGTGGTGAACCCCTGTCATCACCATGCAAGTGTTTGACTGGTTTTACAGCCAAGTTTCCGAACCAATCGGCGGTGGGGGAGTGGTCCAGTGGCTGCATTAGGGAAAAGGTGTTGACATGCGGTAACGGCATACAAGGTAACTTTTCAAAGCTTGAAAAGGTGAAACTGCCGGATCATTCTGTTCTGTTAAACAATAGGAGTATGAACGAGTGTGAATCTGAATGTCGGCGGAACTGTTCTTGCACAGCTTATGCTTATGTAAATGCGACAGATGGAAGTAATATTGGGACATGCTTGGCATGGTTTGGCAAATTACTGGATCTAGTAGAGAATTACAACCAATCTAGTCATGATATCTATATTCGTGTTCATGGCTCCGAACTAGGCAAAAAGGGTCTTTCTGTTAATTCCTTGAAGCGGACCCTTGTAATTGCAATAGTCTCTGCAGCAGTTGGATTGCTTACAATAACTTTTGGCTATTTCTTTTGGAAGAAAAAAATGGAAAAGAAAGGAGGTGGGAAGAATGATACAGAATTACCAATCTTCAGTTTAAGGAGTATGTTAGCTGCTACAAACAACTTCTCTGAAGCGAATAAACTTGGAGAGGGGGGATTCGGCCCTGTTTATAAGGGAATTTTGCAAGAAAATCAAGAAGTGGCCATAAAGAGGCTATCAAAGAAGTCTGGGCAAGGACATCATGAGTTCAAGAATGAGTTGGAACTTATAGCCAAACTCCAGCATACCAATCTTGTAAGGCTATTGGGTTGCTGTATGGAAGGAGATGAAATGATATTGATCTATGAGTACATGTCTAATCGAAGTTTGGACAAATTTTTGTTTGATCCTTTTGAAAAGACAAGGTTAGATTGGGATACACGCTTTCGAATTGTACAAGGTATTGCTCAAGGAGTACTATATATTCACAAGTACTCTAGATTGAAAATCATCCACAGAGATCTAAAAGCAAGTAATGTTCTATTGGATGGAACAATGAACCCCAAAGTGTCCGACTTTGGAATGGCGAGAATTTTTGATATAAATCAAATTGAAGCAAATACCAACAAGGTTGTTGGGACATACGGCTACATGTCTCCTGAATATGCACTCTATGGTCATTTCTCCGAGAAGTTGGATGTATTTAGTTTTGGAGTATTGTTGTTAGAGATTATAAGTGGAAAGAAGAATGCTTCTTTTTATCGTTTTGAAAATTCACTAACACTTGCTCAGTGGGTATGGGAATTATGGAAAGAAGGTAGAGGAGTGGAGGTAATTGACGCGTCAGTAAAGGTAACATGCCGGATTCATGAAGCTTTGAGGTGTATCCATGTCGGGCTCTTGTGTGTTCAAGAAGCTCCAGCTGATCGACCAACAATGTCATCGGTGATTCATATGCTCGAGGTCAATGAAGCTACATCACTTCCACCCTCCAAAGAACCTGGTTTTTCAACATGTAGGAATTCAAGTTATGTTACCACTTATTCTAACAATGTAGTTACTATTACTTTGCCAGAACCTCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

805

Amino Acids

89.91

Weight (kDa)

8.2

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 74 - 173 5e-31 D-mannose binding lectin
S_locus_glycop PF00954 234 - 317 1.9e-14 S-locus glycoprotein domain
PAN_2 PF08276 345 - 407 2e-14 PAN-like domain
Pkinase PF00069 494 - 761 7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 496 - 763 1.2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1524, 2066
Acc36I ACCTGC 1 cut(s) 74
AccB1I GGYRCC 1 cut(s) 504
AccBSI CCGCTC 1 cut(s) 844
AccI GTMKAC 1 cut(s) 187
AccII CGCG 2 cut(s) 680, 2174
AciI CCGC 7 cut(s) 678, 842, 876, 968, 1017, 1126, 1315
AclWI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1077, 1224, 1733
AcoI YGGCCR 2 cut(s) 493, 1554
AcsI RAATTY 9 cut(s) 163, 200, 805, 835, 1530, 1727, 1923, 2104, 2353
AcuI CTGAAG 2 cut(s) 1426, 1503
AcyI GRCGYC 1 cut(s) 505
AdeI CACNNNGTG 1 cut(s) 423
AfaI GTAC 9 cut(s) 64, 84, 576, 632, 646, 1703, 1788, 1809, 1826
AfiI CCNNNNNNNGG 5 cut(s) 542, 594, 967, 1314, 1563
AflIII ACRYGT 4 cut(s) 1704, 1983, 2172, 2345
AjnI CCWGG 4 cut(s) 85, 460, 515, 2332
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
Alw26I GTCTC 4 cut(s) 125, 739, 1342, 1992
AlwI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1077, 1224, 1733
AlwNI CAGNNNCTG 2 cut(s) 344, 990
Ama87I CYCGRG 1 cut(s) 2291
AoxI GGCC 5 cut(s) 4, 493, 585, 1513, 1554
ApeKI GCWGC 5 cut(s) 276, 521, 990, 1343, 1463
ApoI RAATTY 9 cut(s) 163, 200, 805, 835, 1530, 1727, 1923, 2104, 2353
AspLEI GCGC 2 cut(s) 507, 526
AspS9I GGNCC 5 cut(s) 4, 878, 981, 1317, 1514
AsuC2I CCSGG 2 cut(s) 258, 543
AsuHPI GGTGA 6 cut(s) 544, 831, 909, 914, 1069, 2290
AsuII TTCGAA 1 cut(s) 1780
AvaI CYCGRG 1 cut(s) 2291
AvaII GGWCC 3 cut(s) 878, 981, 1317
BalI TGGCCA 2 cut(s) 495, 1556
BamHI GGATCC 1 cut(s) 769
BanI GGYRCC 1 cut(s) 504
BanII GRGCYC 1 cut(s) 2232
BbvI GCAGC 5 cut(s) 288, 508, 977, 1355, 1450
BccI CCATC 3 cut(s) 275, 1163, 1874
BceAI ACGGC 2 cut(s) 1039, 1993
BciT130I CCWGG 4 cut(s) 87, 462, 517, 2334
BciVI GTATCC 3 cut(s) 376, 1762, 2228
BcnI CCSGG 2 cut(s) 258, 543
BcoDI GTCTC 4 cut(s) 125, 739, 1342, 1992
BfaI CTAG 8 cut(s) 309, 377, 668, 810, 1220, 1242, 1280, 1830
BfmI CTRYAG 3 cut(s) 774, 791, 1341
BfoI RGCGCY 1 cut(s) 508
BfuAI ACCTGC 1 cut(s) 74
BfuI GTATCC 3 cut(s) 376, 1762, 2228
BglII AGATCT 1 cut(s) 1852
BisI GCNGC 5 cut(s) 277, 522, 991, 1344, 1464
BlpI GCTNAGC 1 cut(s) 272
BlsI GCNGC 5 cut(s) 278, 523, 992, 1345, 1465
BmcAI AGTACT 2 cut(s) 1809, 1826
Bme1390I CCNGG 6 cut(s) 87, 258, 462, 517, 543, 2334
Bme18I GGWCC 3 cut(s) 878, 981, 1317
BmeT110I CYCGRG 1 cut(s) 2291
BmgT120I GGNCC 5 cut(s) 4, 878, 981, 1317, 1514
BmiI GGNNCC 6 cut(s) 506, 676, 771, 880, 1273, 1319
BmrFI CCNGG 6 cut(s) 87, 258, 462, 517, 543, 2334
BmsI GCATC 2 cut(s) 224, 344
BplI GAGNNNNNCTC 2 cut(s) 610, 642
BpmI CTGGAG 2 cut(s) 1616, 2235
Bpu1102I GCTNAGC 1 cut(s) 272
Bpu14I TTCGAA 1 cut(s) 1780
BpuEI CTTGAG 2 cut(s) 149, 1785
BpuMI CCSGG 2 cut(s) 258, 543
BsaBI GATNNNNATC 4 cut(s) 285, 717, 1691, 1935
BsaHI GRCGYC 1 cut(s) 505
BsaI GGTCTC 1 cut(s) 125
BsaJI CCNNGG 3 cut(s) 181, 516, 555
BsaWI WCCGGW 1 cut(s) 386
BsaXI ACNNNNNCTCC 2 cut(s) 2148, 2178
Bsc4I CCNNNNNNNGG 5 cut(s) 542, 594, 967, 1314, 1563
Bse118I RCCGGY 1 cut(s) 6
Bse1I ACTGG 5 cut(s) 373, 496, 940, 984, 1218
Bse3DI GCAATG 1 cut(s) 360
Bse8I GATNNNNATC 4 cut(s) 285, 717, 1691, 1935
BseBI CCWGG 4 cut(s) 87, 462, 517, 2334
BseDI CCNNGG 3 cut(s) 181, 516, 555
BseGI GGATG 6 cut(s) 48, 439, 512, 1842, 1885, 2035
BseJI GATNNNNATC 4 cut(s) 285, 717, 1691, 1935
BseLI CCNNNNNNNGG 5 cut(s) 542, 594, 967, 1314, 1563
BseMI GCAATG 1 cut(s) 360
BseMII CTCAG 4 cut(s) 286, 392, 759, 2135
BseNI ACTGG 5 cut(s) 373, 496, 940, 984, 1218
BseRI GAGGAG 1 cut(s) 2169
BseXI GCAGC 5 cut(s) 288, 508, 977, 1355, 1450
Bsh1236I CGCG 2 cut(s) 680, 2174
BshFI GGCC 5 cut(s) 6, 495, 587, 1515, 1556
BshNI GGYRCC 1 cut(s) 504
BsiHKCI CYCGRG 1 cut(s) 2291
BsiSI CCGG 6 cut(s) 7, 257, 387, 543, 1067, 2194
BslFI GGGAC 3 cut(s) 864, 1198, 1984
BslI CCNNNNNNNGG 5 cut(s) 542, 594, 967, 1314, 1563
BsmAI GTCTC 4 cut(s) 125, 739, 1342, 1992
BsmFI GGGAC 3 cut(s) 864, 1198, 1984
BsmI GAATGC 1 cut(s) 2086
BsnI GGCC 5 cut(s) 6, 495, 587, 1515, 1556
Bso31I GGTCTC 1 cut(s) 125
BsoBI CYCGRG 1 cut(s) 2291
Bsp119I TTCGAA 1 cut(s) 1780
Bsp1286I GDGCHC 1 cut(s) 2232
Bsp1407I TGTACA 2 cut(s) 630, 1786
Bsp1720I GCTNAGC 1 cut(s) 272
BspACI CCGC 7 cut(s) 678, 842, 876, 968, 1017, 1126, 1315
BspANI GGCC 5 cut(s) 6, 495, 587, 1515, 1556
BspCNI CTCAG 4 cut(s) 285, 393, 758, 2134
BspFNI CGCG 2 cut(s) 680, 2174
BspHI TCATGA 3 cut(s) 1246, 1594, 2200
BspLI GGNNCC 6 cut(s) 506, 676, 771, 880, 1273, 1319
BspMAI CTGCAG 2 cut(s) 795, 1345
BspMI ACCTGC 1 cut(s) 74
BspPI GGATC 8 cut(s) 309, 527, 560, 764, 777, 1077, 1224, 1733
BspT104I TTCGAA 1 cut(s) 1780
BspT107I GGYRCC 1 cut(s) 504
BspTNI GGTCTC 1 cut(s) 125
BsrBI CCGCTC 1 cut(s) 844
BsrDI GCAATG 1 cut(s) 360
BsrFI RCCGGY 1 cut(s) 6
BsrGI TGTACA 2 cut(s) 630, 1786
BsrI ACTGG 5 cut(s) 373, 496, 940, 984, 1218
BssAI RCCGGY 1 cut(s) 6
BssECI CCNNGG 3 cut(s) 181, 516, 555
BssNAI GTATAC 1 cut(s) 188
BssNI GRCGYC 1 cut(s) 505
BssT1I CCWWGG 2 cut(s) 181, 555
Bst1107I GTATAC 1 cut(s) 188
Bst2UI CCWGG 4 cut(s) 87, 462, 517, 2334
Bst4CI ACNGT 2 cut(s) 857, 1133
BstACI GRCGYC 1 cut(s) 505
BstAUI TGTACA 2 cut(s) 630, 1786
BstBI TTCGAA 1 cut(s) 1780
BstDEI CTNAG 4 cut(s) 272, 401, 745, 2121
BstF5I GGATG 6 cut(s) 48, 439, 512, 1842, 1885, 2035
BstFNI CGCG 2 cut(s) 680, 2174
BstH2I RGCGCY 1 cut(s) 508
BstHHI GCGC 2 cut(s) 507, 526
BstMAI GTCTC 4 cut(s) 125, 739, 1342, 1992
BstMWI GCNNNNNNNGC 2 cut(s) 799, 1023
BstNI CCWGG 4 cut(s) 87, 462, 517, 2334
BstNSI RCATGY 6 cut(s) 1017, 1191, 1708, 1987, 2193, 2349
BstSCI CCNGG 6 cut(s) 85, 256, 460, 515, 541, 2332
BstSFI CTRYAG 3 cut(s) 774, 791, 1341
BstUI CGCG 2 cut(s) 680, 2174
BstV1I GCAGC 5 cut(s) 288, 508, 977, 1355, 1450
BstX2I RGATCY 4 cut(s) 565, 769, 1216, 1852
BstYI RGATCY 4 cut(s) 565, 769, 1216, 1852
BstZ17I GTATAC 1 cut(s) 188
BsuI GTATCC 3 cut(s) 376, 1762, 2228
BsuRI GGCC 5 cut(s) 6, 495, 587, 1515, 1556
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 6 cut(s) 48, 439, 512, 1842, 1885, 2035
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 5 cut(s) 32, 106, 736, 991, 2129
BveI ACCTGC 1 cut(s) 74
CaiI CAGNNNCTG 2 cut(s) 344, 990
CciI TCATGA 3 cut(s) 1246, 1594, 2200
CfoI GCGC 2 cut(s) 507, 526
Cfr10I RCCGGY 1 cut(s) 6
Cfr13I GGNCC 5 cut(s) 4, 878, 981, 1317, 1514
CseI GACGC 2 cut(s) 2163, 2180
CsiI ACCWGGT 1 cut(s) 2332
Csp6I GTAC 9 cut(s) 63, 83, 575, 631, 645, 1702, 1787, 1808, 1825
CviQI GTAC 9 cut(s) 63, 83, 575, 631, 645, 1702, 1787, 1808, 1825
DdeI CTNAG 4 cut(s) 272, 401, 745, 2121
DinI GGCGCC 1 cut(s) 506
DraIII CACNNNGTG 1 cut(s) 423
EaeI YGGCCR 2 cut(s) 493, 1554
EciI GGCGGA 1 cut(s) 1141
Eco130I CCWWGG 2 cut(s) 181, 555
Eco147I AGGCCT 1 cut(s) 587
Eco24I GRGCYC 1 cut(s) 2232
Eco31I GGTCTC 1 cut(s) 125
Eco32I GATATC 1 cut(s) 1252
Eco47I GGWCC 3 cut(s) 878, 981, 1317
Eco57I CTGAAG 2 cut(s) 1426, 1503
Eco88I CYCGRG 1 cut(s) 2291
EcoRI GAATTC 3 cut(s) 805, 835, 2353
EcoRII CCWGG 4 cut(s) 85, 460, 515, 2332
EcoRV GATATC 1 cut(s) 1252
EcoT14I CCWWGG 2 cut(s) 181, 555
EcoT22I ATGCAT 1 cut(s) 337
EcoT38I GRGCYC 1 cut(s) 2232
EgeI GGCGCC 1 cut(s) 506
EheI GGCGCC 1 cut(s) 506
ErhI CCWWGG 2 cut(s) 181, 555
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 539, 571
FaqI GGGAC 3 cut(s) 864, 1198, 1984
FauNDI CATATG 1 cut(s) 2286
FblI GTMKAC 1 cut(s) 187
Fnu4HI GCNGC 5 cut(s) 277, 522, 991, 1344, 1464
FokI GGATG 6 cut(s) 35, 426, 499, 1829, 1892, 2042
FriOI GRGCYC 1 cut(s) 2232
Fsp4HI GCNGC 5 cut(s) 277, 522, 991, 1344, 1464
FspBI CTAG 8 cut(s) 309, 377, 668, 810, 1220, 1242, 1280, 1830
GlaI GCGC 2 cut(s) 506, 525
GluI GCNGC 5 cut(s) 277, 522, 991, 1344, 1464
GsuI CTGGAG 2 cut(s) 1616, 2235
HaeII RGCGCY 1 cut(s) 508
HaeIII GGCC 5 cut(s) 6, 495, 587, 1515, 1556
HapII CCGG 6 cut(s) 7, 257, 387, 543, 1067, 2194
HgaI GACGC 2 cut(s) 2163, 2180
HhaI GCGC 2 cut(s) 507, 526
Hin1I GRCGYC 1 cut(s) 505
Hin6I GCGC 2 cut(s) 505, 524
HinP1I GCGC 2 cut(s) 505, 524
HincII GTYRAC 2 cut(s) 327, 1011
HindII GTYRAC 2 cut(s) 327, 1011
HindIII AAGCTT 2 cut(s) 1046, 2205
HinfI GANTC 8 cut(s) 192, 239, 251, 358, 1112, 1509, 2197, 2281
HpaII CCGG 6 cut(s) 7, 257, 387, 543, 1067, 2194
HphI GGTGA 6 cut(s) 544, 831, 909, 914, 1069, 2290
Hpy166II GTNNAC 5 cut(s) 188, 327, 552, 905, 1011
Hpy188I TCNGA 9 cut(s) 306, 402, 739, 957, 1117, 1276, 1483, 1906, 2020
Hpy8I GTNNAC 5 cut(s) 188, 327, 552, 905, 1011
HpyAV CCTTC 3 cut(s) 592, 1667, 2141
HpyCH4III ACNGT 2 cut(s) 857, 1133
HpyCH4IV ACGT 2 cut(s) 24, 818
HpyF10VI GCNNNNNNNGC 2 cut(s) 799, 1023
HpyF3I CTNAG 4 cut(s) 272, 401, 745, 2121
HpySE526I ACGT 2 cut(s) 24, 818
Hsp92I GRCGYC 1 cut(s) 505
HspAI GCGC 2 cut(s) 505, 524
KasI GGCGCC 1 cut(s) 504
LmnI GCTCC 2 cut(s) 1277, 2254
Lsp1109I GCAGC 5 cut(s) 288, 508, 977, 1355, 1450
LweI GCATC 2 cut(s) 224, 344
MabI ACCWGGT 1 cut(s) 2332
MaeI CTAG 8 cut(s) 309, 377, 668, 810, 1220, 1242, 1280, 1830
MaeII ACGT 2 cut(s) 24, 818
MaeIII GTNAC 9 cut(s) 20, 28, 109, 415, 1019, 1034, 2185, 2365, 2389
MbiI CCGCTC 1 cut(s) 844
MboII GAAGA 7 cut(s) 114, 142, 422, 1399, 1429, 1432, 2089
MflI RGATCY 4 cut(s) 565, 769, 1216, 1852
MhlI GDGCHC 1 cut(s) 2232
MlsI TGGCCA 2 cut(s) 495, 1556
MluI ACGCGT 1 cut(s) 2172
MluNI TGGCCA 2 cut(s) 495, 1556
Mly113I GGCGCC 1 cut(s) 505
MmeI TCCRAC 7 cut(s) 279, 747, 804, 1330, 1593, 1929, 2007
Mox20I TGGCCA 2 cut(s) 495, 1556
Mph1103I ATGCAT 1 cut(s) 337
MscI TGGCCA 2 cut(s) 495, 1556
MseI TTAA 5 cut(s) 468, 786, 1085, 1302, 1448
MslI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
Msp20I TGGCCA 2 cut(s) 495, 1556
MspA1I CMGCKG 1 cut(s) 2255
MspI CCGG 6 cut(s) 7, 257, 387, 543, 1067, 2194
MspR9I CCNGG 6 cut(s) 87, 258, 462, 517, 543, 2334
Mva1269I GAATGC 1 cut(s) 2086
MvaI CCWGG 4 cut(s) 87, 462, 517, 2334
MvnI CGCG 2 cut(s) 680, 2174
MwoI GCNNNNNNNGC 2 cut(s) 799, 1023
NarI GGCGCC 1 cut(s) 505
NciI CCSGG 2 cut(s) 258, 543
NdeI CATATG 1 cut(s) 2286
NlaIV GGNNCC 6 cut(s) 506, 676, 771, 880, 1273, 1319
NmuCI GTSAC 2 cut(s) 109, 415
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 6 cut(s) 1017, 1191, 1708, 1987, 2193, 2349
NspV TTCGAA 1 cut(s) 1780
PaeR7I CTCGAG 1 cut(s) 2291
PagI TCATGA 3 cut(s) 1246, 1594, 2200
PceI AGGCCT 1 cut(s) 587
PciI ACATGT 3 cut(s) 1704, 1983, 2345
PctI GAATGC 1 cut(s) 2086
PfeI GAWTC 8 cut(s) 192, 239, 251, 358, 1112, 1509, 2197, 2281
PkrI GCNGC 5 cut(s) 278, 523, 992, 1345, 1465
PluTI GGCGCC 1 cut(s) 508
PscI ACATGT 3 cut(s) 1704, 1983, 2345
PsiI TTATAA 2 cut(s) 1524, 2066
Psp6I CCWGG 4 cut(s) 85, 460, 515, 2332
PspGI CCWGG 4 cut(s) 85, 460, 515, 2332
PspN4I GGNNCC 6 cut(s) 506, 676, 771, 880, 1273, 1319
PspPI GGNCC 5 cut(s) 4, 878, 981, 1317, 1514
PspXI VCTCGAGB 1 cut(s) 2291
PstI CTGCAG 2 cut(s) 795, 1345
PstNI CAGNNNCTG 2 cut(s) 344, 990
PsuI RGATCY 4 cut(s) 565, 769, 1216, 1852
PvuII CAGCTG 1 cut(s) 2255
RsaI GTAC 9 cut(s) 64, 84, 576, 632, 646, 1703, 1788, 1809, 1826
RsaNI GTAC 9 cut(s) 63, 83, 575, 631, 645, 1702, 1787, 1808, 1825
RseI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
SaqAI TTAA 5 cut(s) 468, 786, 1085, 1302, 1448
SatI GCNGC 5 cut(s) 277, 522, 991, 1344, 1464
Sau96I GGNCC 5 cut(s) 4, 878, 981, 1317, 1514
ScaI AGTACT 2 cut(s) 1809, 1826
ScrFI CCNGG 6 cut(s) 87, 258, 462, 517, 543, 2334
SduI GDGCHC 1 cut(s) 2232
SexAI ACCWGGT 1 cut(s) 2332
SfaNI GCATC 2 cut(s) 224, 344
SfcI CTRYAG 3 cut(s) 774, 791, 1341
SfoI GGCGCC 1 cut(s) 506
Sfr274I CTCGAG 1 cut(s) 2291
SfuI TTCGAA 1 cut(s) 1780
SinI GGWCC 3 cut(s) 878, 981, 1317
SlaI CTCGAG 1 cut(s) 2291
SmiMI CAYNNNNRTG 4 cut(s) 220, 444, 919, 925
SmlI CTYRAG 3 cut(s) 128, 1800, 2291
SmoI CTYRAG 3 cut(s) 128, 1800, 2291
SseBI AGGCCT 1 cut(s) 587
SsiI CCGC 7 cut(s) 678, 842, 876, 968, 1017, 1126, 1315
SspDI GGCGCC 1 cut(s) 504
SspI AATATT 1 cut(s) 1180
SspMI CTAG 8 cut(s) 309, 377, 668, 810, 1220, 1242, 1280, 1830
StuI AGGCCT 1 cut(s) 587
StyD4I CCNGG 6 cut(s) 85, 256, 460, 515, 541, 2332
StyI CCWWGG 2 cut(s) 181, 555
TaaI ACNGT 2 cut(s) 857, 1133
TaiI ACGT 2 cut(s) 27, 821
TaqI TCGA 6 cut(s) 435, 1714, 1780, 2260, 2292, 2413
TatI WGTACW 5 cut(s) 630, 1701, 1786, 1807, 1824
TfiI GAWTC 8 cut(s) 192, 239, 251, 358, 1112, 1509, 2197, 2281
Tru1I TTAA 5 cut(s) 468, 786, 1085, 1302, 1448
Tru9I TTAA 5 cut(s) 468, 786, 1085, 1302, 1448
TscAI CASTG 5 cut(s) 39, 106, 736, 991, 2129
TseFI GTSAC 2 cut(s) 109, 415
TseI GCWGC 5 cut(s) 276, 521, 990, 1343, 1463
Tsp45I GTSAC 2 cut(s) 109, 415
TspRI CASTG 5 cut(s) 39, 106, 736, 991, 2129
VpaK11BI GGWCC 3 cut(s) 878, 981, 1317
XapI RAATTY 9 cut(s) 163, 200, 805, 835, 1530, 1727, 1923, 2104, 2353
XbaI TCTAGA 1 cut(s) 1829
XceI RCATGY 6 cut(s) 1017, 1191, 1708, 1987, 2193, 2349
XhoI CTCGAG 1 cut(s) 2291
XmiI GTMKAC 1 cut(s) 187
XspI CTAG 8 cut(s) 309, 377, 668, 810, 1220, 1242, 1280, 1830
ZrmI AGTACT 2 cut(s) 1809, 1826
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.