Rroxscaffold_7G00214740

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000679
Physical Location & Seq
Reverse (-)
65352467 .. 65359893
7427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00214740.1

Sequence Viewer

Length: 1488 bp
ATGGTTCCGGAGCGGTCCGAGTCAGATCCGAGTTCGGCCTGTGACCTCCGACACGATGCGAGTGAAGACCCAATCGACTCGGTCGAGGCCGAGACGAGTCTGATCAATGCCGTCTACCTCGACAGCAAGGCCGAGCTCGTGGCTCAGTCGAAGCGACTCGGCGGCCGGGCGTTAGACCTAGCGACCGCGTCGAAGCTCCTGCATCTCTGCTGCAACTTTGACTCTGTAGAGTGCGCCTCGGCGCTTCTCAGCGGACAGCTCGGAGCGATACCACTCGTGAACGAGTTAGACGAGGCCGGGAAAACGCCGCTACACACGGCGGTGGAGTCTCACGCGTTGCGGTGCGTGGAGGCGTTGCTGAAGAAACACGCTCGTACGGACCTGAGGACGAAGGACGGTGAGGCACAGCTACCGTTGGAGTTGTCGCTTACTGAGGCAAGGTTGGATATATATTGGAATCCGAACGATTTCTCCAAGGAAGAATTTGTCCTTCACATAACTGAAAAGGATTTGAGCATTGTGAGACTTTTGAGTGACAAAACCAAGGAGATCGCTGAGGTGGCTTATTCATACGCTGTTCAAGGGCGCGTAGCTTCTCTGACGGCTCTGCTCATCGTCGCCGCCGAGAAGGTTATCGATTCCGTGTTGGAGTTGCGGGAGGCTTTGGCCCTGGGCGGCCATACAACGACGCCGTTGAGGGCGGCCAAAAAGGAAGCTCTTGCTGCTCCGGGAGATAGACCTGCTTCAGCTCTTCGGAGCTGTAGTTCAGAGCTGTGGTGGAGACAAGAAGGTGACTTCGCCACTCATCCGTGCAGCTCAGAGCATGGTGCTCTCGTAAGGCAAAGGAATAAAATGGGGTTGACAGCATTTCATATTGCTGCTGGTAATGGTAATTCAAAGGCCCTTGAGATCCTTCTGTTGGAAGACCCGTTAGCTGTCCAATATATGACGGAAATGAAAGAAACCCCCCTCTTTTTCGCTGTGAAGAATGGGAGTAAAGACTGCACTGAGCTTCTTTTAACATGGGGATCAAATGGTGAAGTCCTTAACGTGCGTGGGCAAAAAGCTATAGACCTGGCAACCTCTCAAGATATGCGTGACATACTGCTGAACATAACCACTGTTAGCCTCGTTAATCAGGCCTTCCCCAATCAACATAAATGTACTGCCTTAGAGGTGACAGATGAAGACACCACTACTGAAAGGCATTTGCTTGTGCATGTTTATATGTTTACTCTGTTCATAATTCTCAAGTTTCTACTGCCTGCTAATGCTAGAAATGTTAACTCAATCACCAAGGCAGAAGCTTATGTTTTGGGAAAGTTCTTTGAAGAGTTTGGATCAGTGGAAGATGCTGTAGTTATTGTAACTCAGATAGAAAAGAAGATACAATCTCGAGGCTTTGGTTTTGTCACATTTAGAGAGGAGAAATCTGCTTTAGAAGCCATGCAAAGCGAACTACGTTACCATGAGAGGCAAGAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

495

Amino Acids

54.55

Weight (kDa)

5.23

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 63 - 127 2.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 280 - 344 5.9e-09 Ankyrin repeats (3 copies)
RRM_1 PF00076 440 - 485 3.9e-07 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 748
AccBSI CCGCTC 1 cut(s) 13
AccI GTMKAC 1 cut(s) 114
AccII CGCG 3 cut(s) 188, 335, 588
AccIII TCCGGA 1 cut(s) 7
AclWI GGATC 4 cut(s) 20, 904, 1036, 1348
AcoI YGGCCR 3 cut(s) 163, 676, 702
AcsI RAATTY 1 cut(s) 482
AcuI CTGAAG 2 cut(s) 380, 729
AcyI GRCGYC 1 cut(s) 689
AfaI GTAC 2 cut(s) 376, 1165
AfiI CCNNNNNNNGG 1 cut(s) 919
AflIII ACRYGT 1 cut(s) 333
AgsI TTSAA 3 cut(s) 581, 897, 1331
AjnI CCWGG 2 cut(s) 669, 1074
AleI CACNNNNGTG 1 cut(s) 320
AloI GAACNNNNNNTCC 4 cut(s) 455, 487, 748, 780
Alw21I GWGCWC 2 cut(s) 138, 832
Alw26I GTCTC 4 cut(s) 86, 333, 517, 775
AlwI GGATC 4 cut(s) 20, 904, 1036, 1348
Ama87I CYCGRG 1 cut(s) 1395
Aor13HI TCCGGA 1 cut(s) 7
ApeKI GCWGC 4 cut(s) 210, 722, 813, 878
ApoI RAATTY 1 cut(s) 482
Asp700I GAANNNNTTC 1 cut(s) 467
AspLEI GCGC 3 cut(s) 236, 244, 588
AspS9I GGNCC 4 cut(s) 15, 379, 667, 901
AsuC2I CCSGG 3 cut(s) 167, 298, 729
AsuHPI GGTGA 5 cut(s) 410, 803, 1049, 1189, 1285
AvaI CYCGRG 1 cut(s) 1395
AvaII GGWCC 2 cut(s) 15, 379
AxyI CCTNAGG 1 cut(s) 383
BanII GRGCYC 1 cut(s) 138
BauI CACGAG 2 cut(s) 137, 275
BbsI GAAGAC 3 cut(s) 72, 930, 1194
Bbv12I GWGCWC 2 cut(s) 138, 832
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 4 cut(s) 197, 709, 825, 865
BceAI ACGGC 4 cut(s) 95, 333, 618, 676
BcgI CGANNNNNNTGC 2 cut(s) 181, 215
BciT130I CCWGG 2 cut(s) 671, 1076
BclI TGATCA 1 cut(s) 102
BcnI CCSGG 3 cut(s) 167, 298, 729
BcoDI GTCTC 4 cut(s) 86, 333, 517, 775
BfaI CTAG 2 cut(s) 179, 1275
BfmI CTRYAG 4 cut(s) 225, 760, 1068, 1356
BfoI RGCGCY 1 cut(s) 245
BfuAI ACCTGC 1 cut(s) 748
BisI GCNGC 9 cut(s) 163, 211, 308, 621, 676, 702, 723, 814, 879
BlsI GCNGC 9 cut(s) 164, 212, 309, 622, 677, 703, 724, 815, 880
Bme1390I CCNGG 5 cut(s) 167, 298, 671, 729, 1076
Bme18I GGWCC 2 cut(s) 15, 379
BmeT110I CYCGRG 1 cut(s) 1395
BmgT120I GGNCC 4 cut(s) 15, 379, 667, 901
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 5 cut(s) 167, 298, 671, 729, 1076
BmsI GCATC 3 cut(s) 46, 211, 1342
BpiI GAAGAC 3 cut(s) 72, 930, 1194
BplI GAGNNNNNCTC 2 cut(s) 221, 253
Bpu10I CCTNAGC 1 cut(s) 555
BpuEI CTTGAG 3 cut(s) 926, 1071, 1235
BpuMI CCSGG 3 cut(s) 167, 298, 729
Bsa29I ATCGAT 1 cut(s) 636
BsaHI GRCGYC 1 cut(s) 689
BsaJI CCNNGG 6 cut(s) 237, 474, 543, 669, 670, 1296
BsaWI WCCGGW 1 cut(s) 7
BsaXI ACNNNNNCTCC 4 cut(s) 455, 485, 748, 778
Bsc4I CCNNNNNNNGG 1 cut(s) 919
Bse21I CCTNAGG 1 cut(s) 383
BseAI TCCGGA 1 cut(s) 7
BseBI CCWGG 2 cut(s) 671, 1076
BseCI ATCGAT 1 cut(s) 636
BseDI CCNNGG 6 cut(s) 237, 474, 543, 669, 670, 1296
BseGI GGATG 1 cut(s) 805
BseLI CCNNNNNNNGG 1 cut(s) 919
BseMII CTCAG 8 cut(s) 158, 262, 374, 423, 546, 831, 999, 1385
BseRI GAGGAG 1 cut(s) 1439
BseX3I CGGCCG 1 cut(s) 163
BseXI GCAGC 4 cut(s) 197, 709, 825, 865
BsgI GTGCAG 2 cut(s) 832, 988
Bsh1236I CGCG 3 cut(s) 188, 335, 588
Bsh1285I CGRYCG 3 cut(s) 84, 166, 186
BshVI ATCGAT 1 cut(s) 636
BsiEI CGRYCG 3 cut(s) 84, 166, 186
BsiHKAI GWGCWC 2 cut(s) 138, 832
BsiHKCI CYCGRG 1 cut(s) 1395
BsiSI CCGG 4 cut(s) 8, 166, 297, 728
BsiWI CGTACG 1 cut(s) 374
BslI CCNNNNNNNGG 1 cut(s) 919
BsmAI GTCTC 4 cut(s) 86, 333, 517, 775
BsmBI CGTCTC 1 cut(s) 86
BsoBI CYCGRG 1 cut(s) 1395
Bsp1286I GDGCHC 2 cut(s) 138, 832
Bsp13I TCCGGA 1 cut(s) 7
Bsp143I GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
BspCNI CTCAG 8 cut(s) 157, 261, 375, 424, 547, 830, 1000, 1384
BspDI ATCGAT 1 cut(s) 636
BspEI TCCGGA 1 cut(s) 7
BspFNI CGCG 3 cut(s) 188, 335, 588
BspLI GGNNCC 1 cut(s) 6
BspMI ACCTGC 1 cut(s) 748
BspPI GGATC 4 cut(s) 20, 904, 1036, 1348
BspQI GCTCTTC 1 cut(s) 756
BsrBI CCGCTC 1 cut(s) 13
BssECI CCNNGG 6 cut(s) 237, 474, 543, 669, 670, 1296
BssMI GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
BssNI GRCGYC 1 cut(s) 689
BssSI CACGAG 2 cut(s) 137, 275
BssT1I CCWWGG 3 cut(s) 474, 543, 1296
Bst2BI CACGAG 2 cut(s) 137, 275
Bst2UI CCWGG 2 cut(s) 671, 1076
Bst4CI ACNGT 3 cut(s) 398, 414, 1123
Bst6I CTCTTC 2 cut(s) 756, 1326
BstACI GRCGYC 1 cut(s) 689
BstC8I GCNNGC 1 cut(s) 1266
BstDEI CTNAG 9 cut(s) 144, 248, 383, 432, 555, 817, 1008, 1171, 1371
BstF5I GGATG 1 cut(s) 805
BstFNI CGCG 3 cut(s) 188, 335, 588
BstH2I RGCGCY 1 cut(s) 245
BstHHI GCGC 3 cut(s) 236, 244, 588
BstKTI GATC 6 cut(s) 28, 105, 552, 912, 1031, 1343
BstMAI GTCTC 4 cut(s) 86, 333, 517, 775
BstMBI GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
BstMCI CGRYCG 3 cut(s) 84, 166, 186
BstMWI GCNNNNNNNGC 3 cut(s) 560, 722, 1442
BstNI CCWGG 2 cut(s) 671, 1076
BstNSI RCATGY 1 cut(s) 1223
BstSCI CCNGG 5 cut(s) 165, 296, 669, 727, 1074
BstSFI CTRYAG 4 cut(s) 225, 760, 1068, 1356
BstUI CGCG 3 cut(s) 188, 335, 588
BstV1I GCAGC 4 cut(s) 197, 709, 825, 865
BstV2I GAAGAC 3 cut(s) 72, 930, 1194
BstX2I RGATCY 2 cut(s) 25, 909
BstYI RGATCY 2 cut(s) 25, 909
BstZI CGGCCG 1 cut(s) 163
Bsu15I ATCGAT 1 cut(s) 636
Bsu36I CCTNAGG 1 cut(s) 383
BsuTUI ATCGAT 1 cut(s) 636
BtsCI GGATG 1 cut(s) 805
BtsIMutI CAGTG 3 cut(s) 1005, 1119, 1350
BveI ACCTGC 1 cut(s) 748
Cac8I GCNNGC 1 cut(s) 1266
CfoI GCGC 3 cut(s) 236, 244, 588
Cfr13I GGNCC 4 cut(s) 15, 379, 667, 901
ClaI ATCGAT 1 cut(s) 636
CpoI CGGWCCG 1 cut(s) 15
CseI GACGC 2 cut(s) 177, 697
Csp6I GTAC 2 cut(s) 375, 1164
CspI CGGWCCG 1 cut(s) 15
CviAII CATG 5 cut(s) 824, 1023, 1220, 1447, 1469
CviQI GTAC 2 cut(s) 375, 1164
DdeI CTNAG 9 cut(s) 144, 248, 383, 432, 555, 817, 1008, 1171, 1371
DpnI GATC 6 cut(s) 27, 104, 551, 911, 1030, 1342
DpnII GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
EaeI YGGCCR 3 cut(s) 163, 676, 702
EagI CGGCCG 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 756, 1326
EarI CTCTTC 2 cut(s) 756, 1326
Ecl136II GAGCTC 1 cut(s) 136
EclXI CGGCCG 1 cut(s) 163
Eco130I CCWWGG 3 cut(s) 474, 543, 1296
Eco147I AGGCCT 1 cut(s) 1142
Eco24I GRGCYC 1 cut(s) 138
Eco47I GGWCC 2 cut(s) 15, 379
Eco52I CGGCCG 1 cut(s) 163
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 2 cut(s) 380, 729
Eco81I CCTNAGG 1 cut(s) 383
Eco88I CYCGRG 1 cut(s) 1395
EcoICRI GAGCTC 1 cut(s) 136
EcoO109I RGGNCCY 1 cut(s) 901
EcoRII CCWGG 2 cut(s) 669, 1074
EcoT14I CCWWGG 3 cut(s) 474, 543, 1296
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 3 cut(s) 474, 543, 1296
Esp3I CGTCTC 1 cut(s) 86
FaeI CATG 5 cut(s) 827, 1026, 1223, 1450, 1472
FatI CATG 5 cut(s) 823, 1022, 1219, 1446, 1468
FauI CCCGC 1 cut(s) 648
FbaI TGATCA 1 cut(s) 102
FblI GTMKAC 1 cut(s) 114
Fnu4HI GCNGC 9 cut(s) 163, 211, 308, 621, 676, 702, 723, 814, 879
FokI GGATG 1 cut(s) 792
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 9 cut(s) 163, 211, 308, 621, 676, 702, 723, 814, 879
FspBI CTAG 2 cut(s) 179, 1275
GlaI GCGC 3 cut(s) 235, 243, 587
GluI GCNGC 9 cut(s) 163, 211, 308, 621, 676, 702, 723, 814, 879
HaeII RGCGCY 1 cut(s) 245
HapII CCGG 4 cut(s) 8, 166, 297, 728
HgaI GACGC 2 cut(s) 177, 697
HhaI GCGC 3 cut(s) 236, 244, 588
Hin1I GRCGYC 1 cut(s) 689
Hin1II CATG 5 cut(s) 827, 1026, 1223, 1450, 1472
Hin6I GCGC 3 cut(s) 234, 242, 586
HinP1I GCGC 3 cut(s) 234, 242, 586
HincII GTYRAC 2 cut(s) 861, 1285
HindII GTYRAC 2 cut(s) 861, 1285
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 8 cut(s) 20, 77, 97, 156, 221, 326, 457, 638
HpaI GTTAAC 1 cut(s) 1285
HpaII CCGG 4 cut(s) 8, 166, 297, 728
HphI GGTGA 5 cut(s) 410, 803, 1049, 1189, 1285
Hpy166II GTNNAC 5 cut(s) 115, 280, 861, 1233, 1285
Hpy188III TCNNGA 4 cut(s) 8, 277, 1088, 1395
Hpy8I GTNNAC 5 cut(s) 115, 280, 861, 1233, 1285
Hpy99I CGWCG 3 cut(s) 193, 620, 691
HpyAV CCTTC 6 cut(s) 385, 500, 622, 782, 923, 1153
HpyCH4III ACNGT 3 cut(s) 398, 414, 1123
HpyCH4IV ACGT 2 cut(s) 1050, 1462
HpyCH4V TGCA 6 cut(s) 202, 213, 813, 1005, 1219, 1450
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 722, 1442
HpyF3I CTNAG 9 cut(s) 144, 248, 383, 432, 555, 817, 1008, 1171, 1371
HpySE526I ACGT 2 cut(s) 1050, 1462
Hsp92I GRCGYC 1 cut(s) 689
Hsp92II CATG 5 cut(s) 827, 1026, 1223, 1450, 1472
HspAI GCGC 3 cut(s) 234, 242, 586
Kpn2I TCCGGA 1 cut(s) 7
Ksp22I TGATCA 1 cut(s) 102
KspAI GTTAAC 1 cut(s) 1285
Kzo9I GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
LguI GCTCTTC 1 cut(s) 756
LmnI GCTCC 5 cut(s) 10, 201, 263, 730, 756
Lsp1109I GCAGC 4 cut(s) 197, 709, 825, 865
LweI GCATC 3 cut(s) 46, 211, 1342
MaeI CTAG 2 cut(s) 179, 1275
MaeII ACGT 2 cut(s) 1050, 1462
MaeIII GTNAC 8 cut(s) 41, 533, 791, 1097, 1177, 1366, 1411, 1463
MalI GATC 6 cut(s) 27, 104, 551, 911, 1030, 1342
MbiI CCGCTC 1 cut(s) 13
MboI GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
MflI RGATCY 2 cut(s) 25, 909
MhlI GDGCHC 2 cut(s) 138, 832
MluCI AATT 3 cut(s) 482, 892, 1245
MluI ACGCGT 1 cut(s) 333
MlyI GAGTC 6 cut(s) 29, 71, 106, 150, 215, 335
MmeI TCCRAC 5 cut(s) 73, 396, 423, 627, 900
MroI TCCGGA 1 cut(s) 7
MroXI GAANNNNTTC 1 cut(s) 467
MseI TTAA 4 cut(s) 1019, 1047, 1134, 1284
MslI CAYNNNNRTG 1 cut(s) 320
MspA1I CMGCKG 1 cut(s) 252
MspI CCGG 4 cut(s) 8, 166, 297, 728
MspR9I CCNGG 5 cut(s) 167, 298, 671, 729, 1076
MvaI CCWGG 2 cut(s) 671, 1076
MvnI CGCG 3 cut(s) 188, 335, 588
MwoI GCNNNNNNNGC 3 cut(s) 560, 722, 1442
NciI CCSGG 3 cut(s) 167, 298, 729
NdeII GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
NlaIII CATG 5 cut(s) 827, 1026, 1223, 1450, 1472
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 5 cut(s) 115, 138, 157, 218, 649
NmuCI GTSAC 6 cut(s) 41, 533, 791, 1097, 1177, 1411
NspI RCATGY 1 cut(s) 1223
OliI CACNNNNGTG 1 cut(s) 320
PaeR7I CTCGAG 1 cut(s) 1395
PasI CCCWGGG 1 cut(s) 670
PceI AGGCCT 1 cut(s) 1142
PciSI GCTCTTC 1 cut(s) 756
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 288, 621
PdmI GAANNNNTTC 1 cut(s) 467
PfeI GAWTC 2 cut(s) 457, 638
Pfl23II CGTACG 1 cut(s) 374
PflFI GACNNNGTC 2 cut(s) 80, 187
PfoI TCCNGGA 1 cut(s) 727
PkrI GCNGC 9 cut(s) 164, 212, 309, 622, 677, 703, 724, 815, 880
PleI GAGTC 6 cut(s) 28, 71, 105, 150, 215, 334
PpsI GAGTC 6 cut(s) 28, 71, 105, 150, 215, 334
Psp124BI GAGCTC 1 cut(s) 138
Psp6I CCWGG 2 cut(s) 669, 1074
PspGI CCWGG 2 cut(s) 669, 1074
PspLI CGTACG 1 cut(s) 374
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 4 cut(s) 15, 379, 667, 901
PsuI RGATCY 2 cut(s) 25, 909
PsyI GACNNNGTC 2 cut(s) 80, 187
RsaI GTAC 2 cut(s) 376, 1165
RsaNI GTAC 2 cut(s) 375, 1164
RseI CAYNNNNRTG 1 cut(s) 320
Rsr2I CGGWCCG 1 cut(s) 15
RsrII CGGWCCG 1 cut(s) 15
SacI GAGCTC 1 cut(s) 138
SapI GCTCTTC 1 cut(s) 756
SaqAI TTAA 4 cut(s) 1019, 1047, 1134, 1284
SatI GCNGC 9 cut(s) 163, 211, 308, 621, 676, 702, 723, 814, 879
Sau3AI GATC 6 cut(s) 25, 102, 549, 909, 1028, 1340
Sau96I GGNCC 4 cut(s) 15, 379, 667, 901
SchI GAGTC 6 cut(s) 29, 71, 106, 150, 215, 335
ScrFI CCNGG 5 cut(s) 167, 298, 671, 729, 1076
SduI GDGCHC 2 cut(s) 138, 832
SfaNI GCATC 3 cut(s) 46, 211, 1342
SfcI CTRYAG 4 cut(s) 225, 760, 1068, 1356
Sfr274I CTCGAG 1 cut(s) 1395
SinI GGWCC 2 cut(s) 15, 379
SlaI CTCGAG 1 cut(s) 1395
SmiMI CAYNNNNRTG 1 cut(s) 320
SmlI CTYRAG 4 cut(s) 905, 1086, 1250, 1395
SmoI CTYRAG 4 cut(s) 905, 1086, 1250, 1395
Sse9I AATT 3 cut(s) 482, 892, 1245
SseBI AGGCCT 1 cut(s) 1142
SspMI CTAG 2 cut(s) 179, 1275
SstI GAGCTC 1 cut(s) 138
StuI AGGCCT 1 cut(s) 1142
StyD4I CCNGG 5 cut(s) 165, 296, 669, 727, 1074
StyI CCWWGG 3 cut(s) 474, 543, 1296
TaaI ACNGT 3 cut(s) 398, 414, 1123
TaiI ACGT 2 cut(s) 1053, 1465
TaqI TCGA 7 cut(s) 75, 84, 120, 149, 191, 636, 1396
TaqII GACCGA 1 cut(s) 70
TasI AATT 3 cut(s) 482, 892, 1245
TatI WGTACW 1 cut(s) 1163
TauI GCSGC 5 cut(s) 165, 310, 623, 678, 704
TfiI GAWTC 2 cut(s) 457, 638
Tru1I TTAA 4 cut(s) 1019, 1047, 1134, 1284
Tru9I TTAA 4 cut(s) 1019, 1047, 1134, 1284
TscAI CASTG 3 cut(s) 1012, 1126, 1350
TseFI GTSAC 6 cut(s) 41, 533, 791, 1097, 1177, 1411
TseI GCWGC 4 cut(s) 210, 722, 813, 878
Tsp45I GTSAC 6 cut(s) 41, 533, 791, 1097, 1177, 1411
TspDTI ATGAA 5 cut(s) 558, 860, 971, 1200, 1231
TspGWI ACGGA 4 cut(s) 392, 631, 798, 965
TspRI CASTG 3 cut(s) 1012, 1126, 1350
Tth111I GACNNNGTC 2 cut(s) 80, 187
VpaK11BI GGWCC 2 cut(s) 15, 379
XapI RAATTY 1 cut(s) 482
XceI RCATGY 1 cut(s) 1223
XhoI CTCGAG 1 cut(s) 1395
XmiI GTMKAC 1 cut(s) 114
XmnI GAANNNNTTC 1 cut(s) 467
XspI CTAG 2 cut(s) 179, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.